ONTOLOGY REPORT - ANNOTATIONS |
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Term: | phototransduction |
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Accession: | GO:0007602
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browse the term
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Definition: | The sequence of reactions within a cell required to convert absorbed photons into a molecular signal. |
Synonyms: | narrow_synonym: | phototransduction, visible light, light adaptation; phototrophin mediated phototransduction |
| related_synonym: | opsin |
| xref: | Wikipedia:Visual_phototransduction |
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ARRB1 |
arrestin beta 1 |
acts_upstream_of_or_within |
ISO |
(PMID:11853756) |
MGI |
PMID:11853756 |
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NCBI chr11:70,319,935...70,411,276
Ensembl chr11:73,630,276...73,654,155
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ASIC2 |
acid sensing ion channel subunit 2 |
involved_in acts_upstream_of_or_within |
IEA ISO |
(PMID:14762118) |
Ensembl MGI |
PMID:14762118 |
GO_REF:0000107 |
NCBI chr17:22,628,322...23,774,249
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CABP4 |
calcium binding protein 4 |
involved_in acts_upstream_of_or_within |
IEA ISO |
(PMID:16249514) |
Ensembl MGI |
PMID:16249514 |
GO_REF:0000107 |
NCBI chr11:62,813,477...62,820,425
Ensembl chr11:66,121,992...66,128,758
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CNGB1 |
cyclic nucleotide gated channel subunit beta 1 |
involved_in acts_upstream_of_or_within |
IEA ISO |
(PMID:15634774) |
Ensembl MGI |
PMID:15634774 |
GO_REF:0000107 |
NCBI chr16:38,160,056...38,249,474
Ensembl chr16:57,292,093...57,375,460
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GNAT1 |
G protein subunit alpha transducin 1 |
involved_in acts_upstream_of_or_within |
IEA ISO |
(PMID:11095744), (PMID:11853756), (PMID:15073279), (PMID:16249514), (PMID:17881533), (PMID:18367617) |
Ensembl MGI |
PMID:11095744 PMID:11853756 PMID:15073279 PMID:16249514 PMID:17881533 PMID:18367617 More...
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GO_REF:0000107 |
NCBI chr 3:50,119,267...50,126,131
Ensembl chr 3:51,354,472...51,360,568
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GNAT2 |
G protein subunit alpha transducin 2 |
involved_in acts_upstream_of_or_within |
IEA ISO |
(PMID:17408617), (PMID:18171936) (PMID:29518352) |
Ensembl MGI |
PMID:17408617 PMID:18171936 PMID:29518352 |
GO_REF:0000107 |
NCBI chr 1:111,980,855...111,990,686
Ensembl chr 1:111,208,510...111,225,808
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GNGT1 |
G protein subunit gamma transducin 1 |
involved_in acts_upstream_of_or_within |
IEA ISO |
(PMID:18367617) |
Ensembl MGI |
PMID:18367617 |
GO_REF:0000107 |
NCBI chr 7:85,839,639...85,859,844
Ensembl chr 7:99,446,623...99,451,185
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GUCA1A |
guanylate cyclase activator 1A |
involved_in acts_upstream_of_or_within |
IEA ISO |
(PMID:11493703), (PMID:15173221) |
Ensembl MGI |
PMID:11493703 PMID:15173221 |
GO_REF:0000107 |
NCBI chr 6:41,693,593...41,774,591
Ensembl chr 6:43,045,307...43,070,520
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GUCA1B |
guanylate cyclase activator 1B |
acts_upstream_of_or_within |
ISO |
(PMID:11493703), (PMID:15173221) |
MGI |
PMID:11493703 PMID:15173221 |
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NCBI chr 6:41,771,537...41,783,364
Ensembl chr 6:43,072,469...43,083,838
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LDB3 |
LIM domain binding 3 |
involved_in |
IEA |
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UniProt |
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GO_REF:0000043 |
NCBI chr10:83,095,625...83,164,297
Ensembl chr10:86,654,737...86,722,148 Ensembl chr10:86,654,737...86,722,148
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OPN1SW |
opsin 1, short wave sensitive |
involved_in |
IEA |
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UniProt InterPro |
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GO_REF:0000002 GO_REF:0000043 |
NCBI chr 7:120,724,363...120,727,649
Ensembl chr 7:133,246,131...133,251,464
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OPN3 |
opsin 3 |
involved_in |
IEA |
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UniProt |
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GO_REF:0000043 |
NCBI chr 1:217,155,765...217,202,577
Ensembl chr 1:222,136,422...222,184,598
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OPN4 |
opsin 4 |
involved_in |
ISO IEA |
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RGD Ensembl UniProt |
PMID:11834834 |
GO_REF:0000043 GO_REF:0000107 RGD:633348 |
NCBI chr10:83,082,351...83,095,161
Ensembl chr10:86,641,746...86,653,143
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OPN5 |
opsin 5 |
involved_in |
IEA |
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UniProt Ensembl |
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GO_REF:0000043 GO_REF:0000107 |
NCBI chr 6:47,364,955...47,409,199
Ensembl chr 6:48,628,478...48,658,119
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RCVRN |
recoverin |
involved_in acts_upstream_of_or_within |
IEA ISO |
(PMID:15173221) |
Ensembl MGI |
PMID:15173221 |
GO_REF:0000107 |
NCBI chr17:41,747,255...41,759,074
Ensembl chr17:46,490,605...46,502,962
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RGR |
retinal G protein coupled receptor |
involved_in |
IEA |
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InterPro UniProt |
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GO_REF:0000002 GO_REF:0000043 |
NCBI chr10:80,660,589...80,674,636
Ensembl chr10:84,230,385...84,246,475
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RHO |
rhodopsin |
involved_in acts_upstream_of_or_within |
IEA ISO |
(PMID:16723493) |
UniProt MGI InterPro Ensembl |
PMID:16723493 |
GO_REF:0000002 GO_REF:0000043 GO_REF:0000107 |
NCBI chr 3:126,586,510...126,593,028
Ensembl chr 3:133,938,419...133,944,928
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RRH |
retinal pigment epithelium-derived rhodopsin homolog |
involved_in |
IEA |
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UniProt |
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GO_REF:0000043 |
NCBI chr 4:102,322,028...102,341,974
Ensembl chr 4:112,891,370...112,909,398
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SLC24A4 |
solute carrier family 24 member 4 |
involved_in acts_upstream_of |
IEA ISO |
(PMID:28650316) |
Ensembl ARUK-UCL |
PMID:28650316 |
GO_REF:0000107 |
NCBI chr14:72,956,230...73,128,851
Ensembl chr14:92,299,507...92,468,939
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GNAT1 |
G protein subunit alpha transducin 1 |
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ISO |
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RGD |
PMID:11931744 |
RGD:1599009 |
NCBI chr 3:50,119,267...50,126,131
Ensembl chr 3:51,354,472...51,360,568
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PCP2 |
Purkinje cell protein 2 |
acts_upstream_of_or_within |
ISO |
(PMID:18768681) |
MGI |
PMID:18768681 |
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NCBI chr19:6,921,350...6,923,618
Ensembl chr19:7,776,331...7,779,241
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RHO |
rhodopsin |
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ISO |
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RGD |
PMID:8814134 |
RGD:6893595 |
NCBI chr 3:126,586,510...126,593,028
Ensembl chr 3:133,938,419...133,944,928
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OPN5 |
opsin 5 |
involved_in |
IEA |
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Ensembl |
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GO_REF:0000107 |
NCBI chr 6:47,364,955...47,409,199
Ensembl chr 6:48,628,478...48,658,119
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AIPL1 |
AIP like 1 HSP90 co-chaperone |
involved_in acts_upstream_of_or_within |
IEA ISO |
(PMID:15365173) |
Ensembl MGI |
PMID:15365173 |
GO_REF:0000107 |
NCBI chr17:6,463,812...6,473,636
Ensembl chr17:6,450,420...6,461,868
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CHRM1 |
cholinergic receptor muscarinic 1 |
involved_in |
ISO |
(PMID:12196552) |
AgBase |
PMID:12196552 |
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NCBI chr11:58,261,476...58,274,685
Ensembl chr11:61,614,818...61,616,200
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GNAT1 |
G protein subunit alpha transducin 1 |
involved_in |
IEA |
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Ensembl TreeGrafter |
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GO_REF:0000107 GO_REF:0000118 |
NCBI chr 3:50,119,267...50,126,131
Ensembl chr 3:51,354,472...51,360,568
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GNAT3 |
G protein subunit alpha transducin 3 |
involved_in |
IEA |
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TreeGrafter |
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GO_REF:0000118 |
NCBI chr 7:72,422,660...72,476,887
Ensembl chr 7:86,085,465...86,139,227
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PDE6C |
phosphodiesterase 6C |
involved_in acts_upstream_of_or_within |
IEA ISO |
(PMID:16723493) |
Ensembl MGI |
PMID:16723493 |
GO_REF:0000107 |
NCBI chr10:90,361,003...90,414,169
Ensembl chr10:93,871,704...93,924,654
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PNPLA2 |
patatin like phospholipase domain containing 2 |
acts_upstream_of involved_in |
ISO IEA |
(PMID:12484775) |
MGI Ensembl |
PMID:12484775 |
GO_REF:0000107 |
NCBI chr11:838,339...844,035
Ensembl chr11:881,934...886,896
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RBP4 |
retinol binding protein 4 |
acts_upstream_of |
ISO |
(PMID:12484775) |
MGI |
PMID:12484775 |
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NCBI chr10:90,337,879...90,347,530
Ensembl chr10:93,848,166...93,857,887
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TTR |
transthyretin |
acts_upstream_of involved_in |
ISO IEA |
(PMID:12484775) |
MGI Ensembl |
PMID:12484775 |
GO_REF:0000107 |
NCBI chr18:24,809,707...24,816,713
Ensembl chr18:28,407,893...28,414,960
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RHO |
rhodopsin |
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ISO |
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RGD |
PMID:2525480 |
RGD:6893558 |
NCBI chr 3:126,586,510...126,593,028
Ensembl chr 3:133,938,419...133,944,928
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G |
AIPL1 |
AIP like 1 HSP90 co-chaperone |
involved_in acts_upstream_of_or_within |
IEA ISO |
(PMID:15365178) (PMID:15365173) |
Ensembl MGI |
PMID:15365173 PMID:15365178 |
GO_REF:0000107 |
NCBI chr17:6,463,812...6,473,636
Ensembl chr17:6,450,420...6,461,868
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GRK1 |
G protein-coupled receptor kinase 1 |
involved_in |
IEA |
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Ensembl InterPro |
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GO_REF:0000002 GO_REF:0000107 |
NCBI chr13:94,816,045...94,838,509
Ensembl chr13:113,867,002...113,885,610
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Term paths to the root
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