ONTOLOGY REPORT - ANNOTATIONS |
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Term: | phototransduction |
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Accession: | GO:0007602
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browse the term
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Definition: | The sequence of reactions within a cell required to convert absorbed photons into a molecular signal. |
Synonyms: | narrow_synonym: | phototransduction, visible light, light adaptation; phototrophin mediated phototransduction |
| related_synonym: | opsin |
| xref: | Wikipedia:Visual_phototransduction |
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Arrb1 |
arrestin, beta 1 |
acts_upstream_of_or_within |
ISO |
MGI:2388373 (PMID:11853756) |
RGD |
PMID:11853756 |
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NCBI chr 1:163,249,654...163,321,711
Ensembl chr 1:153,838,078...153,904,061
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Asic2 |
acid sensing ion channel subunit 2 |
involved_in acts_upstream_of_or_within |
IEA ISO |
GO_REF:0000107 MGI:3043849 (PMID:14762118) |
Ensembl RGD |
PMID:14762118 |
GO_REF:0000107 |
NCBI chr10:66,368,308...67,438,237
Ensembl chr10:65,870,594...66,940,424
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Cabp4 |
calcium binding protein 4 |
acts_upstream_of_or_within |
ISO |
MGI:3056615 (PMID:16249514) |
RGD |
PMID:16249514 |
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NCBI chr 1:210,857,223...210,872,431
Ensembl chr 1:201,428,672...201,433,172
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Cngb1 |
cyclic nucleotide gated channel subunit beta 1 |
acts_upstream_of_or_within |
ISO |
MGI:3527896 (PMID:15634774) |
RGD |
PMID:15634774 |
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NCBI chr19:9,732,646...9,798,864
Ensembl chr19:9,726,595...9,791,173
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Gnat1 |
G protein subunit alpha transducin 1 |
acts_upstream_of_or_within |
ISO |
MGI:2152779 (PMID:11095744), (PMID:11853756), (PMID:15073279), (PMID:16249514), (PMID:17881533), (PMID:18367617) |
RGD |
PMID:11095744 PMID:11853756 PMID:15073279 PMID:16249514 PMID:17881533 PMID:18367617 More...
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NCBI chr 8:117,229,575...117,234,311
Ensembl chr 8:108,350,935...108,355,671
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Gnat2 |
G protein subunit alpha transducin 2 |
acts_upstream_of_or_within |
ISO |
MGI:3588845|MGI:5051274 (PMID:17408617), (PMID:18171936), (PMID:29518352) |
RGD |
PMID:17408617 PMID:18171936 PMID:29518352 |
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NCBI chr 2:195,726,371...195,735,866
Ensembl chr 2:195,726,762...195,735,866
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Gngt1 |
G protein subunit gamma transducin 1 |
acts_upstream_of_or_within |
ISO |
MGI:3783323 (PMID:18367617) |
RGD |
PMID:18367617 |
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NCBI chr 4:32,006,267...32,009,252
Ensembl chr 4:32,006,267...32,009,252
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Gpr52 |
G protein-coupled receptor 52 |
involved_in |
IBA |
GO_REF:0000033 |
GO_Central |
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GO_REF:0000033 |
NCBI chr13:72,800,265...72,804,989
Ensembl chr13:72,800,127...72,806,180
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Gpr88 |
G-protein coupled receptor 88 |
involved_in |
IBA |
GO_REF:0000033 |
GO_Central |
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GO_REF:0000033 |
NCBI chr 2:204,191,443...204,199,576
Ensembl chr 2:204,191,427...204,199,733
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Guca1a |
guanylate cyclase activator 1A |
acts_upstream_of_or_within |
ISO |
MGI:2664159 (PMID:11493703), (PMID:15173221) |
RGD |
PMID:11493703 PMID:15173221 |
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NCBI chr 9:21,080,782...21,096,221
Ensembl chr 9:13,588,525...13,598,565
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Guca1b |
guanylate cyclase activator 1B |
acts_upstream_of_or_within |
ISO |
MGI:2664160 (PMID:11493703), (PMID:15173221) |
RGD |
PMID:11493703 PMID:15173221 |
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NCBI chr 9:21,097,274...21,105,107
Ensembl chr 9:13,599,619...13,607,455
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Opn1mw |
opsin 1, medium wave sensitive |
involved_in |
IEA IBA |
GO_REF:0000043 GO_REF:0000033 |
UniProt GO_Central |
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GO_REF:0000033 GO_REF:0000043 |
NCBI chr X:151,905,056...151,925,419
Ensembl chr X:151,905,096...151,925,388
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Opn1sw |
opsin 1, short wave sensitive |
involved_in |
IEA IBA |
GO_REF:0000043 GO_REF:0000033 |
UniProt GO_Central |
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GO_REF:0000033 GO_REF:0000043 |
NCBI chr 4:58,942,685...58,945,825
Ensembl chr 4:57,977,313...57,980,457
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Opn3 |
opsin 3 |
involved_in |
IBA |
GO_REF:0000033 |
GO_Central |
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GO_REF:0000033 |
NCBI chr13:90,121,560...90,152,076
Ensembl chr13:87,589,333...87,619,847
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Opn4 |
opsin 4 |
involved_in |
IDA IBA ISO IEA |
GO_REF:0000033 (PMID:12808468) GO_REF:0000043 (PMID:15674244) |
GO_Central RGD UniProt |
PMID:12808468 PMID:15674244 PMID:11834834 |
GO_REF:0000033 GO_REF:0000043, RGD:633348 |
NCBI chr16:9,920,408...9,929,580
Ensembl chr16:9,920,491...10,005,711
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Opn5 |
opsin 5 |
involved_in |
ISO IBA |
(PMID:30936473) GO_REF:0000033 |
RGD GO_Central |
PMID:30936473 |
GO_REF:0000033 |
NCBI chr 9:18,368,393...18,416,098
Ensembl chr 9:18,368,416...18,415,476
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Plcb4 |
phospholipase C, beta 4 |
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NAS |
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RGD |
PMID:7688223 |
RGD:633574 |
NCBI chr 3:143,405,721...143,775,129
Ensembl chr 3:122,953,196...123,322,392
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Rcvrn |
recoverin |
acts_upstream_of_or_within |
ISO |
MGI:3584102 (PMID:15173221) |
RGD |
PMID:15173221 |
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NCBI chr10:52,887,667...52,895,413
Ensembl chr10:52,388,706...52,396,453
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Rgr |
retinal G protein coupled receptor |
involved_in |
IBA |
GO_REF:0000033 |
GO_Central |
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GO_REF:0000033 |
NCBI chr16:12,801,594...12,816,402
Ensembl chr16:12,801,594...12,816,223
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Rho |
rhodopsin |
acts_upstream_of_or_within involved_in |
ISO IBA IEA |
MGI:2181812 (PMID:16723493) GO_REF:0000033 GO_REF:0000107 |
RGD GO_Central Ensembl |
PMID:16723493 |
GO_REF:0000033 GO_REF:0000107 |
NCBI chr 4:150,653,205...150,658,367
Ensembl chr 4:148,980,611...148,985,773
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Rrh |
retinal pigment epithelium derived rhodopsin homolog |
involved_in |
IBA |
GO_REF:0000033 |
GO_Central |
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GO_REF:0000033 |
NCBI chr 2:218,362,195...218,374,387
Ensembl chr 2:218,362,200...218,374,599
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Slc24a4 |
solute carrier family 24 member 4 |
acts_upstream_of |
ISO |
(PMID:28650316) |
RGD |
PMID:28650316 |
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NCBI chr 6:127,044,470...127,184,684
Ensembl chr 6:121,280,031...121,414,949
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Gnat1 |
G protein subunit alpha transducin 1 |
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IMP |
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RGD |
PMID:11931744 |
RGD:1599009 |
NCBI chr 8:117,229,575...117,234,311
Ensembl chr 8:108,350,935...108,355,671
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Grk1 |
G protein-coupled receptor kinase 1 |
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TAS |
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RGD |
PMID:9147475 |
RGD:729748 |
NCBI chr16:76,122,501...76,135,792
Ensembl chr16:76,123,842...76,135,792
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Pcp2 |
Purkinje cell protein 2 |
acts_upstream_of_or_within |
ISO |
MGI:3579782 (PMID:18768681) |
RGD |
PMID:18768681 |
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NCBI chr12:6,479,554...6,481,550
Ensembl chr12:1,681,659...1,683,899
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Rho |
rhodopsin |
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IDA |
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RGD |
PMID:8814134 |
RGD:6893595 |
NCBI chr 4:150,653,205...150,658,367
Ensembl chr 4:148,980,611...148,985,773
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Opn5 |
opsin 5 |
involved_in |
ISO |
(PMID:22043319) |
RGD |
PMID:22043319 |
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NCBI chr 9:18,368,393...18,416,098
Ensembl chr 9:18,368,416...18,415,476
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Aipl1 |
aryl hydrocarbon receptor-interacting protein-like 1 |
acts_upstream_of_or_within |
ISO |
MGI:3054784 (PMID:15365173) |
RGD |
PMID:15365173 |
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NCBI chr10:57,154,226...57,163,455
Ensembl chr10:56,655,693...56,664,922
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Chrm1 |
cholinergic receptor, muscarinic 1 |
involved_in |
ISO |
(PMID:12196552) |
RGD |
PMID:12196552 |
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NCBI chr 1:214,996,180...215,012,136
Ensembl chr 1:205,567,220...205,582,356
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Gnat1 |
G protein subunit alpha transducin 1 |
involved_in |
ISO IBA |
(PMID:17584859) GO_REF:0000033 |
RGD GO_Central |
PMID:17584859 |
GO_REF:0000033 |
NCBI chr 8:117,229,575...117,234,311
Ensembl chr 8:108,350,935...108,355,671
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G |
Gnat3 |
G protein subunit alpha transducin 3 |
involved_in |
IBA |
GO_REF:0000033 |
GO_Central |
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GO_REF:0000033 |
NCBI chr 4:18,054,551...18,104,332
Ensembl chr 4:17,162,490...17,212,283
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Pde6c |
phosphodiesterase 6C |
acts_upstream_of_or_within |
ISO |
MGI:2657247 (PMID:16723493) |
RGD |
PMID:16723493 |
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NCBI chr 1:235,909,583...235,965,435
Ensembl chr 1:235,909,775...235,965,315
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Pnpla2 |
patatin-like phospholipase domain containing 2 |
acts_upstream_of involved_in |
ISO IEA |
MGI:2445721 (PMID:12484775) GO_REF:0000107 |
RGD Ensembl |
PMID:12484775 |
GO_REF:0000107 |
NCBI chr 1:205,982,279...205,987,361
Ensembl chr 1:196,552,723...196,557,805
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Rbp4 |
retinol binding protein 4 |
acts_upstream_of |
ISO |
MGI:2445721 (PMID:12484775) |
RGD |
PMID:12484775 |
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NCBI chr 1:245,306,349...245,313,551
Ensembl chr 1:235,893,917...235,901,399
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Ttr |
transthyretin |
acts_upstream_of involved_in |
ISO IEA |
MGI:2445721 (PMID:12484775) GO_REF:0000107 |
RGD Ensembl |
PMID:12484775 |
GO_REF:0000107 |
NCBI chr18:12,216,684...12,225,972
Ensembl chr18:11,943,789...11,951,008
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Rho |
rhodopsin |
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IDA |
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RGD |
PMID:2525480 |
RGD:6893558 |
NCBI chr 4:150,653,205...150,658,367
Ensembl chr 4:148,980,611...148,985,773
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Aipl1 |
aryl hydrocarbon receptor-interacting protein-like 1 |
acts_upstream_of_or_within |
ISO |
MGI:3054784|MGI:3054793 (PMID:15365173), (PMID:15365178) |
RGD |
PMID:15365173 PMID:15365178 |
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NCBI chr10:57,154,226...57,163,455
Ensembl chr10:56,655,693...56,664,922
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Grk1 |
G protein-coupled receptor kinase 1 |
involved_in |
ISS ISO IEA |
GO_REF:0000024 (PMID:15946941) GO_REF:0000107 |
UniProt RGD Ensembl |
PMID:15946941 |
GO_REF:0000024 GO_REF:0000107 |
NCBI chr16:76,122,501...76,135,792
Ensembl chr16:76,123,842...76,135,792
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Term paths to the root
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