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ONTOLOGY REPORT - ANNOTATIONS

Term:visual perception
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Accession:GO:0007601 term browser browse the term
Definition:The series of events required for an organism to receive a visual stimulus, convert it to a molecular signal, and recognize and characterize the signal. Visual stimuli are detected in the form of photons and are processed to form an image.
Synonyms:exact_synonym: sense of sight;   sensory visual perception;   vision
 xref: Wikipedia:Visual_perception

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visual perception term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Abca4 ATP binding cassette subfamily A member 4 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:10412977) InterPro
MGI		 PMID:10412977 GO_REF:0000002 NCBI chrNW_004624742:3,536,591...3,661,706
Ensembl chrNW_004624742:3,536,591...3,661,468 		JBrowse link
G Adgrv1 adhesion G protein-coupled receptor V1 acts_upstream_of_or_within
involved_in		 ISO
IEA		 (PMID:16775142) MGI
TreeGrafter		 PMID:16775142 GO_REF:0000118 NCBI chrNW_004624743:9,849,070...10,292,392 JBrowse link
G Arr3 arrestin 3 involved_in IEA TreeGrafter
UniProt		 GO_REF:0000043 GO_REF:0000118 NCBI chrNW_004624903:246,888...255,169 JBrowse link
G Atf6 activating transcription factor 6 involved_in ISO (PMID:26029869) UniProt PMID:26029869 NCBI chrNW_004624826:189,899...412,540
Ensembl chrNW_004624826:190,131...412,197 		JBrowse link
G Bbs1 Bardet-Biedl syndrome 1 acts_upstream_of_or_within ISO (PMID:38155679) MGI PMID:38155679 NCBI chrNW_004624767:19,875,597...19,893,652
Ensembl chrNW_004624767:19,875,535...19,893,694 		JBrowse link
G Bbs10 Bardet-Biedl syndrome 10 acts_upstream_of_or_within ISO (PMID:36125046), (PMID:36700052), (PMID:38155679) MGI PMID:36125046 PMID:36700052 PMID:38155679 NCBI chrNW_004624750:21,759,412...21,763,608
Ensembl chrNW_004624750:21,759,495...21,766,679 		JBrowse link
G Bbs2 Bardet-Biedl syndrome 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004624757:55,861...88,703
Ensembl chrNW_004624757:55,811...88,562 		JBrowse link
G Cabp1 calcium binding protein 1 involved_in ISO (PMID:27822497) UniProt PMID:27822497 NCBI chrNW_004624747:13,027,839...13,050,262
Ensembl chrNW_004624747:13,027,844...13,050,165 		JBrowse link
G Cabp2 calcium binding protein 2 involved_in IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004624767:19,016,945...19,022,328
Ensembl chrNW_004624767:19,016,945...19,022,328 		JBrowse link
G Cacna1f calcium voltage-gated channel subunit alpha1 F involved_in
acts_upstream_of_or_within		 ISO (PMID:16505158), (PMID:9662399), (PMID:9662400)
(PMID:16155113)		 UniProt
MGI		 PMID:9662399 PMID:9662400 PMID:16155113 PMID:16505158 NCBI chrNW_004624893:945,378...968,041
Ensembl chrNW_004624893:945,436...970,431 		JBrowse link
G Cacnb2 calcium voltage-gated channel auxiliary subunit beta 2 acts_upstream_of_or_within ISO (PMID:11980879) MGI PMID:11980879 NCBI chrNW_004624796:9,502,132...9,858,836
Ensembl chrNW_004624796:9,503,452...9,859,019 		JBrowse link
G Cfh complement factor H involved_in
acts_upstream_of_or_within		 ISO (PMID:17921253)
(PMID:17517971), (PMID:25991857)		 MGI PMID:17517971 PMID:17921253 PMID:25991857 NCBI chrNW_004624798:3,332,549...3,414,435 JBrowse link
G Chrnb2 cholinergic receptor nicotinic beta 2 subunit acts_upstream_of_or_within ISO (PMID:11344259), (PMID:15456819) MGI PMID:11344259 PMID:15456819 NCBI chrNW_004624885:2,839,607...2,851,934
Ensembl chrNW_004624885:2,843,899...2,848,522 		JBrowse link
G Cln5 CLN5 intracellular trafficking protein acts_upstream_of_or_within ISO (PMID:15459177) MGI PMID:15459177 NCBI chrNW_004624751:23,395,284...23,404,798
Ensembl chrNW_004624751:23,396,789...23,404,906 		JBrowse link
G Cln6 CLN6 transmembrane ER protein acts_upstream_of_or_within ISO (PMID:9600738) MGI PMID:9600738 NCBI chrNW_004624781:4,866,896...4,879,321
Ensembl chrNW_004624781:4,866,927...4,879,321 		JBrowse link
G Cln8 CLN8 transmembrane ER and ERGIC protein acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chrNW_004624861:960,643...977,292
Ensembl chrNW_004624861:968,219...977,467 		JBrowse link
G Cnga1 cyclic nucleotide gated channel subunit alpha 1 involved_in IEA UniProt GO_REF:0000043 NCBI chrNW_004624761:18,992,372...19,004,247
Ensembl chrNW_004624761:18,992,384...19,004,202 		JBrowse link
G Col11a1 collagen type XI alpha 1 chain involved_in ISO (PMID:10573014), (PMID:8872475) UniProt PMID:8872475 PMID:10573014 NCBI chrNW_004624857:5,817,472...6,176,421
Ensembl chrNW_004624857:5,817,475...6,029,107 		JBrowse link
G Col1a1 collagen type I alpha 1 chain involved_in ISO (PMID:17557158) UniProt PMID:17557158 NCBI chrNW_004624795:6,167,504...6,183,208
Ensembl chrNW_004624795:6,168,797...6,183,071 		JBrowse link
G Col2a1 collagen type II alpha 1 chain involved_in ISO (PMID:10486316), (PMID:16752401) UniProt PMID:10486316 PMID:16752401 NCBI chrNW_004624816:4,273,969...4,304,519
Ensembl chrNW_004624816:4,274,219...4,304,513 		JBrowse link
G Crb1 crumbs cell polarity complex component 1 involved_in
acts_upstream_of_or_within		 ISO (PMID:12915475)
(PMID:15316081)		 MGI PMID:12915475 PMID:15316081 NCBI chrNW_004624798:2,861,481...2,999,387
Ensembl chrNW_004624798:2,861,520...2,999,697 		JBrowse link
G Cryaa crystallin alpha A involved_in ISO (PMID:14512969), (PMID:9467006) UniProt PMID:9467006 PMID:14512969 NCBI chrNW_004624745:27,636,932...27,639,814
Ensembl chrNW_004624745:27,637,267...27,639,371 		JBrowse link
G Cryba1 crystallin beta A1 involved_in IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004624786:1,757,272...1,777,735
Ensembl chrNW_004624786:1,771,328...1,777,503 		JBrowse link
G Cryba2 crystallin beta A2 involved_in IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004624823:6,023,307...6,027,792
Ensembl chrNW_004624823:6,023,350...6,027,806 		JBrowse link
G Cryba4 crystallin beta A4 involved_in IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004624747:3,142,982...3,147,900
Ensembl chrNW_004624747:3,142,982...3,147,900 		JBrowse link
G Crybb1 crystallin beta B1 involved_in IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004624747:3,125,168...3,137,576
Ensembl chrNW_004624747:3,125,168...3,137,576 		JBrowse link
G Crybb2 crystallin beta B2 acts_upstream_of_or_within
involved_in		 ISO
IEA		 (PMID:7363969) MGI
TreeGrafter		 PMID:7363969 GO_REF:0000118 NCBI chrNW_004624747:1,851,242...1,867,650
Ensembl chrNW_004624747:1,851,248...1,867,573 		JBrowse link
G Crybb3 crystallin beta B3 involved_in IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004624747:1,883,074...1,894,158
Ensembl chrNW_004624747:1,888,103...1,893,334 		JBrowse link
G Crybg3 crystallin beta-gamma domain containing 3 involved_in IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004624789:10,273,386...10,392,694
Ensembl chrNW_004624789:10,273,429...10,391,131 		JBrowse link
G Crygn crystallin gamma N involved_in IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004624800:5,273,128...5,278,955
Ensembl chrNW_004624800:5,273,128...5,278,955 		JBrowse link
G Crygs crystallin gamma S involved_in IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004624730:70,216,813...70,223,412
Ensembl chrNW_004624730:70,217,668...70,223,166 		JBrowse link
G Dnajc19 DnaJ heat shock protein family (Hsp40) member C19 involved_in ISO (PMID:16055927) UniProt PMID:16055927 NCBI chrNW_004624730:58,746,824...58,755,544
Ensembl chrNW_004624730:58,730,413...58,755,688 		JBrowse link
G Dram2 DNA damage regulated autophagy modulator 2 involved_in ISO (PMID:25983245) UniProt PMID:25983245 NCBI chrNW_004624772:6,901,212...6,923,006 JBrowse link
G Elfn1 extracellular leucine rich repeat and fibronectin type III domain containing 1 acts_upstream_of_or_within ISO (PMID:36179691) MGI PMID:36179691 NCBI chrNW_004624740:27,088,407...27,141,492
Ensembl chrNW_004624740:27,092,255...27,141,459 		JBrowse link
G Epas1 endothelial PAS domain protein 1 acts_upstream_of_or_within ISO (PMID:15728559) MGI PMID:15728559 NCBI chrNW_004624738:27,747,770...27,831,213
Ensembl chrNW_004624738:27,747,696...27,834,054 		JBrowse link
G Gabrr2 gamma-aminobutyric acid type A receptor subunit rho2 acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chrNW_004624799:4,841,856...4,900,704
Ensembl chrNW_004624799:4,841,898...4,900,172 		JBrowse link
G Gja3 gap junction protein alpha 3 involved_in IEA InterPro GO_REF:0000002 NCBI chrNW_004624776:17,562,050...17,585,308
Ensembl chrNW_004624776:17,579,913...17,581,121 		JBrowse link
G Gjc1 gap junction protein gamma 1 acts_upstream_of_or_within ISO (PMID:15659592) MGI PMID:15659592 NCBI chrNW_004624795:443,234...466,222
Ensembl chrNW_004624795:461,691...464,454 		JBrowse link
G Gjd2 gap junction protein delta 2 acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chrNW_004624804:1,962,597...1,965,598
Ensembl chrNW_004624804:1,961,865...1,965,673 		JBrowse link
G Glra1 glycine receptor alpha 1 acts_upstream_of_or_within ISO (PMID:17114051) MGI PMID:17114051 NCBI chrNW_004624733:37,153,348...37,238,201
Ensembl chrNW_004624733:37,153,863...37,235,485 		JBrowse link
G Glrb glycine receptor beta acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chrNW_004624848:1,301,051...1,383,931
Ensembl chrNW_004624848:1,298,174...1,384,513 		JBrowse link
G Gnat1 G protein subunit alpha transducin 1 involved_in
acts_upstream_of_or_within		 IEA UniProt
Ensembl		 GO_REF:0000043 GO_REF:0000107 NCBI chrNW_004624730:4,064,982...4,072,172
Ensembl chrNW_004624730:4,066,222...4,071,316 		JBrowse link
G Gnat2 G protein subunit alpha transducin 2 acts_upstream_of_or_within ISO (PMID:29518352)
(PMID:17515894)
(PMID:30111842)		 MGI PMID:17515894 PMID:29518352 PMID:30111842 NCBI chrNW_004624772:5,317,702...5,326,841
Ensembl chrNW_004624772:5,318,113...5,326,841 		JBrowse link
G Gpr179 G protein-coupled receptor 179 involved_in ISO (PMID:22325362)
(PMID:24114537), (PMID:33922602)		 UniProt PMID:22325362 PMID:24114537 PMID:33922602 NCBI chrNW_004624795:4,191,619...4,206,089
Ensembl chrNW_004624795:4,191,975...4,205,002 		JBrowse link
G Grk1 G protein-coupled receptor kinase 1 involved_in IEA InterPro GO_REF:0000002 NCBI chrNW_004624793:453,125...462,053
Ensembl chrNW_004624793:453,125...462,053 		JBrowse link
G Grk7 G protein-coupled receptor kinase 7 involved_in IEA UniProt GO_REF:0000043 NCBI chrNW_004624730:18,429,546...18,464,908
Ensembl chrNW_004624730:18,430,003...18,464,873 		JBrowse link
G Guca1a guanylate cyclase activator 1A involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:11493703), (PMID:15173221) UniProt
TreeGrafter
MGI		 PMID:11493703 PMID:15173221 GO_REF:0000043 GO_REF:0000118 NCBI chrNW_004624754:17,089,061...17,105,538
Ensembl chrNW_004624754:17,089,026...17,094,231 		JBrowse link
G Guca1b guanylate cyclase activator 1B involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:11493703), (PMID:15173221) UniProt
TreeGrafter
MGI		 PMID:11493703 PMID:15173221 GO_REF:0000043 GO_REF:0000118 NCBI chrNW_004624754:17,083,523...17,087,010
Ensembl chrNW_004624754:17,083,523...17,087,010 		JBrowse link
G Gucy2d guanylate cyclase 2D, retinal involved_in IEA UniProt GO_REF:0000043 NCBI chrNW_004624786:10,574,252...10,589,303
Ensembl chrNW_004624786:10,574,968...10,588,540 		JBrowse link
G Impg1 interphotoreceptor matrix proteoglycan 1 involved_in IEA InterPro GO_REF:0000002 NCBI chrNW_004624819:3,002,718...3,030,007 JBrowse link
G Impg2 interphotoreceptor matrix proteoglycan 2 involved_in IEA InterPro GO_REF:0000002 NCBI chrNW_004624789:15,056,692...15,184,385
Ensembl chrNW_004624789:15,060,525...15,175,617 		JBrowse link
G Kcnj10 potassium inwardly rectifying channel subfamily J member 10 acts_upstream_of_or_within ISO (PMID:10908613), (PMID:15359216) MGI PMID:10908613 PMID:15359216 NCBI chrNW_004624794:1,180,822...1,211,781
Ensembl chrNW_004624794:1,180,834...1,212,456 		JBrowse link
G Kcnk9 potassium two pore domain channel subfamily K member 9 involved_in ISO (PMID:36070380) UniProt PMID:36070380 NCBI chrNW_004624735:16,683,099...16,744,648
Ensembl chrNW_004624735:16,683,004...16,754,158 		JBrowse link
G Lamb2 laminin subunit beta 2 acts_upstream_of_or_within ISO (PMID:19907020) MGI PMID:19907020 NCBI chrNW_004624730:3,145,643...3,158,781
Ensembl chrNW_004624730:3,145,643...3,159,101 		JBrowse link
G Lamc3 laminin subunit gamma 3 acts_upstream_of_or_within ISO (PMID:19907020) MGI PMID:19907020 NCBI chrNW_004624760:4,759,680...4,807,720
Ensembl chrNW_004624760:4,760,351...4,807,720 		JBrowse link
G LOC101702208 calcium-binding protein 4 involved_in IEA Ensembl
TreeGrafter		 GO_REF:0000107 GO_REF:0000118 NCBI chrNW_004624767:19,069,262...19,081,258
Ensembl chrNW_004624767:19,070,555...19,073,507 		JBrowse link
G LOC101707479 gamma-crystallin B involved_in IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004624765:7,892,820...7,895,434 JBrowse link
G LOC101725045 gamma-crystallin B involved_in IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004624765:7,899,565...7,901,351
Ensembl chrNW_004624765:7,899,865...7,901,539 		JBrowse link
G Lrit1 leucine rich repeat, Ig-like and transmembrane domains 1 acts_upstream_of_or_within ISO (PMID:29590623) MGI PMID:29590623 NCBI chrNW_004624841:2,790,299...2,799,447
Ensembl chrNW_004624841:2,790,326...2,799,402 		JBrowse link
G Lrit3 leucine rich repeat, Ig-like and transmembrane domains 3 acts_upstream_of_or_within ISO (PMID:24598786) MGI PMID:24598786 NCBI chrNW_004624830:55,940...74,213
Ensembl chrNW_004624830:55,955...74,213 		JBrowse link
G Mfrp membrane frizzled-related protein acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chrNW_004624784:14,709,834...14,714,927
Ensembl chrNW_004624784:14,710,042...14,714,715 		JBrowse link
G Mip major intrinsic protein of lens fiber acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chrNW_004624802:11,600,405...11,603,502
Ensembl chrNW_004624802:11,600,405...11,603,502 		JBrowse link
G Myo3a myosin IIIA involved_in IEA UniProt GO_REF:0000043 NCBI chrNW_004624796:2,774,153...2,983,853 JBrowse link
G Myo5a myosin VA acts_upstream_of_or_within ISO (PMID:15316067) MGI PMID:15316067 NCBI chrNW_004624731:8,114,557...8,280,586
Ensembl chrNW_004624731:8,113,715...8,280,823 		JBrowse link
G Myo7a myosin VIIA involved_in
acts_upstream_of_or_within		 ISO (PMID:7870171)
(PMID:15316067)
(PMID:11222540)		 UniProt
MGI		 PMID:7870171 PMID:11222540 PMID:15316067 NCBI chrNW_004624863:205,468...283,840
Ensembl chrNW_004624863:205,478...283,839 		JBrowse link
G Ndufs4 NADH:ubiquinone oxidoreductase subunit S4 acts_upstream_of_or_within ISO (PMID:25652399) MGI PMID:25652399 NCBI chrNW_004624759:5,630,522...5,733,928 JBrowse link
G Nob1 NIN1 (RPN12) binding protein 1 homolog acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chrNW_004624746:16,661,039...16,672,600
Ensembl chrNW_004624746:16,661,126...16,675,962 		JBrowse link
G Nr2e1 nuclear receptor subfamily 2 group E member 1 acts_upstream_of_or_within ISO (PMID:16702404)
(PMID:10706625)		 MGI PMID:10706625 PMID:16702404 NCBI chrNW_004624780:14,098,144...14,119,791
Ensembl chrNW_004624780:14,098,360...14,119,772 		JBrowse link
G Nxnl2 nucleoredoxin like 2 acts_upstream_of_or_within
involved_in		 ISO
IEA		 (PMID:22343139) MGI
TreeGrafter		 PMID:22343139 GO_REF:0000118 NCBI chrNW_004624765:24,104,325...24,115,965
Ensembl chrNW_004624765:24,105,042...24,115,748 		JBrowse link
G Nyx nyctalopin acts_upstream_of_or_within ISO (PMID:12506099), (PMID:15359216) MGI PMID:12506099 PMID:15359216 NCBI chrNW_004624762:14,154,655...14,183,822
Ensembl chrNW_004624762:14,157,116...14,183,611 		JBrowse link
G Olfm2 olfactomedin 2 acts_upstream_of_or_within ISO (PMID:25218043) MGI PMID:25218043 NCBI chrNW_004624828:2,134,728...2,200,354
Ensembl chrNW_004624828:2,135,245...2,200,332 		JBrowse link
G Opa1 OPA1 mitochondrial dynamin like GTPase involved_in ISO (PMID:11017080) UniProt PMID:11017080 NCBI chrNW_004624730:63,911,066...63,994,886
Ensembl chrNW_004624730:63,911,066...63,995,596 		JBrowse link
G Opa3 outer mitochondrial membrane lipid metabolism regulator OPA3 involved_in ISO (PMID:15342707) UniProt PMID:15342707 NCBI chrNW_004624832:7,580,402...7,619,122
Ensembl chrNW_004624832:7,580,823...7,605,443 		JBrowse link
G Opn1sw opsin 1, short wave sensitive involved_in IEA InterPro
UniProt		 GO_REF:0000002 GO_REF:0000043 NCBI chrNW_004624783:7,412,825...7,416,209
Ensembl chrNW_004624783:7,412,825...7,416,095 		JBrowse link
G Opn4 opsin 4 involved_in IEA InterPro GO_REF:0000002 NCBI chrNW_004624841:472,053...483,623
Ensembl chrNW_004624841:474,035...482,475 		JBrowse link
G Opn5 opsin 5 involved_in IEA InterPro GO_REF:0000002 NCBI chrNW_004624754:13,307,738...13,332,287
Ensembl chrNW_004624754:13,307,738...13,332,287 		JBrowse link
G Pax6 paired box 6 acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chrNW_004624766:20,536,581...20,554,589
Ensembl chrNW_004624766:20,536,233...20,554,759 		JBrowse link
G Pcdh15 protocadherin related 15 acts_upstream_of_or_within ISO (PMID:16799054) MGI PMID:16799054 NCBI chrNW_004624791:9,042,311...9,992,341
Ensembl chrNW_004624791:9,195,902...9,990,131 		JBrowse link
G Pdc phosducin involved_in IEA UniProt GO_REF:0000043 NCBI chrNW_004624814:7,150,941...7,198,327
Ensembl chrNW_004624814:7,190,805...7,198,229 		JBrowse link
G Pdcl phosducin like involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:23637185) UniProt
MGI		 PMID:23637185 GO_REF:0000043 NCBI chrNW_004624760:12,088,965...12,096,994
Ensembl chrNW_004624760:12,088,762...12,095,067 		JBrowse link
G Pde6c phosphodiesterase 6C acts_upstream_of_or_within ISO (PMID:22937111) MGI PMID:22937111 NCBI chrNW_004624737:4,804,630...4,867,565
Ensembl chrNW_004624737:4,810,806...4,867,370 		JBrowse link
G Pde6d phosphodiesterase 6D involved_in IEA UniProt GO_REF:0000043 GO_REF:0000104 NCBI chrNW_004624843:4,741,211...4,776,404
Ensembl chrNW_004624843:4,741,220...4,776,381 		JBrowse link
G Pde6g phosphodiesterase 6G involved_in IEA InterPro
UniProt		 GO_REF:0000002 GO_REF:0000043 NCBI chrNW_004624801:10,597,722...10,602,784
Ensembl chrNW_004624801:10,597,860...10,601,811 		JBrowse link
G Pde6h phosphodiesterase 6H involved_in IEA InterPro
UniProt		 GO_REF:0000002 GO_REF:0000043 NCBI chrNW_004624752:23,051,486...23,055,128
Ensembl chrNW_004624752:23,051,752...23,055,103 		JBrowse link
G Ppt1 palmitoyl-protein thioesterase 1 acts_upstream_of_or_within ISO (PMID:15649713) MGI PMID:15649713 NCBI chrNW_004624764:22,542,892...22,577,077
Ensembl chrNW_004624764:22,543,857...22,577,121 		JBrowse link
G Prph2 peripherin 2 involved_in IEA InterPro
UniProt		 GO_REF:0000002 GO_REF:0000043 NCBI chrNW_004624754:16,685,512...16,699,145
Ensembl chrNW_004624754:16,685,378...16,700,111 		JBrowse link
G Rcvrn recoverin involved_in
acts_upstream_of_or_within		 IEA UniProt
Ensembl		 GO_REF:0000043 GO_REF:0000107 NCBI chrNW_004624786:12,329,116...12,337,234
Ensembl chrNW_004624786:12,329,049...12,337,578 		JBrowse link
G Rd3 RD3 regulator of GUCY2D involved_in ISO (PMID:8486383) UniProt PMID:8486383 NCBI chrNW_004624807:815,027...824,294
Ensembl chrNW_004624807:816,429...824,210 		JBrowse link
G Rdh10 retinol dehydrogenase 10 acts_upstream_of_or_within ISO (PMID:12407145) MGI PMID:12407145 NCBI chrNW_004624744:17,838,047...17,868,423
Ensembl chrNW_004624744:17,837,609...17,868,431 		JBrowse link
G Rdh11 retinol dehydrogenase 11 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004624734:33,283,336...33,295,797
Ensembl chrNW_004624734:33,283,497...33,295,091 		JBrowse link
G Rdh12 retinol dehydrogenase 12 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004624734:33,256,469...33,266,085
Ensembl chrNW_004624734:33,254,432...33,266,140 		JBrowse link
G Rdh8 retinol dehydrogenase 8 acts_upstream_of_or_within ISO (PMID:15755727) MGI PMID:15755727 NCBI chrNW_004624828:2,254,570...2,259,512
Ensembl chrNW_004624828:2,253,995...2,260,315 		JBrowse link
G Rgr retinal G protein coupled receptor involved_in IEA InterPro GO_REF:0000002 NCBI chrNW_004624841:2,778,277...2,787,717
Ensembl chrNW_004624841:2,778,783...2,787,717 		JBrowse link
G Rgs9 regulator of G protein signaling 9 involved_in IEA UniProt GO_REF:0000043 NCBI chrNW_004624870:3,138,311...3,249,297
Ensembl chrNW_004624870:3,143,950...3,218,117 		JBrowse link
G Rho rhodopsin involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:22937111) UniProt
MGI
InterPro		 PMID:22937111 GO_REF:0000002 GO_REF:0000043 NCBI chrNW_004624872:523,892...528,278
Ensembl chrNW_004624872:523,912...527,615 		JBrowse link
G Rom1 retinal outer segment membrane protein 1 involved_in IEA InterPro
UniProt		 GO_REF:0000002 GO_REF:0000043 NCBI chrNW_004624926:1,140,082...1,142,434
Ensembl chrNW_004624926:1,140,793...1,142,253 		JBrowse link
G Rpe65 retinoid isomerohydrolase RPE65 involved_in IEA UniProt GO_REF:0000043 NCBI chrNW_004624742:27,302,222...27,319,549
Ensembl chrNW_004624742:27,302,453...27,319,203 		JBrowse link
G Rpgr retinitis pigmentosa GTPase regulator involved_in
acts_upstream_of_or_within		 ISO (PMID:9399904)
(PMID:12651948)		 UniProt
MGI		 PMID:9399904 PMID:12651948 NCBI chrNW_004624762:17,135,870...17,199,693 JBrowse link
G Rpgrip1 RPGR interacting protein 1 acts_upstream_of_or_within ISO (PMID:12651948) MGI PMID:12651948 NCBI chrNW_004624825:7,289,385...7,366,388
Ensembl chrNW_004624825:7,296,662...7,366,196 		JBrowse link
G Rrh retinal pigment epithelium-derived rhodopsin homolog involved_in IEA InterPro GO_REF:0000002 NCBI chrNW_004624830:77,889...90,507
Ensembl chrNW_004624830:77,598...90,507 		JBrowse link
G Rs1 retinoschisin 1 involved_in
acts_upstream_of_or_within		 ISO (PMID:19093009)
(PMID:38155679)		 UniProt
MGI		 PMID:19093009 PMID:38155679 NCBI chrNW_004624829:3,485,635...3,498,431
Ensembl chrNW_004624829:3,485,708...3,518,447 		JBrowse link
G Slc24a1 solute carrier family 24 member 1 involved_in IEA InterPro
UniProt		 GO_REF:0000002 GO_REF:0000043 NCBI chrNW_004624781:6,934,108...6,957,632
Ensembl chrNW_004624781:6,935,239...6,974,196 		JBrowse link
G Slc38a8 solute carrier family 38 member 8 acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chrNW_004624746:3,528,713...3,554,017
Ensembl chrNW_004624746:3,529,507...3,547,445 		JBrowse link
G Slc4a10 solute carrier family 4 member 10 involved_in ISO (PMID:23056253) UniProt PMID:23056253 NCBI chrNW_004624732:3,541,525...3,849,805
Ensembl chrNW_004624732:3,540,954...3,849,863 		JBrowse link
G Slc4a7 solute carrier family 4 member 7 acts_upstream_of_or_within ISO (PMID:12808454) MGI PMID:12808454 NCBI chrNW_004624788:5,239,858...5,355,186
Ensembl chrNW_004624788:5,243,807...5,355,073 		JBrowse link
G Slitrk6 SLIT and NTRK like family member 6 acts_upstream_of_or_within ISO (PMID:23543054) MGI PMID:23543054 NCBI chrNW_004624779:7,030,017...7,036,581
Ensembl chrNW_004624779:7,030,395...7,036,108 		JBrowse link
G Sox14 SRY-box transcription factor 14 acts_upstream_of_or_within ISO (PMID:22920256) MGI PMID:22920256 NCBI chrNW_004624730:14,278,017...14,279,929
Ensembl chrNW_004624730:14,278,020...14,279,496 		JBrowse link
G Th tyrosine hydroxylase involved_in ISO (PMID:16445854) BHF-UCL PMID:16445854 NCBI chrNW_004624767:15,003,073...15,010,207
Ensembl chrNW_004624767:15,003,092...15,010,154 		JBrowse link
G Trpm1 transient receptor potential cation channel subfamily M member 1 involved_in ISO (PMID:19878917) UniProt PMID:19878917 NCBI chrNW_004624768:1,802,601...1,873,627
Ensembl chrNW_004624768:1,757,293...1,873,627 		JBrowse link
G Unc119 unc-119 lipid binding chaperone involved_in IEA UniProt
TreeGrafter		 GO_REF:0000043 GO_REF:0000118 NCBI chrNW_004624786:1,134,508...1,140,831
Ensembl chrNW_004624786:1,134,162...1,141,474 		JBrowse link
G Vsx1 visual system homeobox 1 acts_upstream_of_or_within ISO (PMID:15043821) MGI PMID:15043821 NCBI chrNW_004624939:375,749...381,823 JBrowse link
G Vsx2 visual system homeobox 2 involved_in IEA UniProt GO_REF:0000043 NCBI chrNW_004624734:27,342,668...27,363,372
Ensembl chrNW_004624734:27,344,221...27,363,372 		JBrowse link
G Wfs1 wolframin ER transmembrane glycoprotein involved_in ISO (PMID:9771706), (PMID:9817917) BHF-UCL PMID:9771706 PMID:9817917 NCBI chrNW_004624755:22,818,653...22,841,717
Ensembl chrNW_004624755:22,824,143...22,841,850 		JBrowse link
G Zic2 Zic family member 2 involved_in ISO (PMID:13678579), (PMID:20676059) UniProt PMID:13678579 PMID:20676059 NCBI chrNW_004624793:11,162,835...11,167,497
Ensembl chrNW_004624793:11,163,916...11,167,457 		JBrowse link
detection of light stimulus involved in visual perception term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Best1 bestrophin 1 acts_upstream_of_or_within ISO (PMID:16636205) MGI PMID:16636205 NCBI chrNW_004624926:471,073...478,436
Ensembl chrNW_004624926:472,176...478,214 		JBrowse link
G Cacna1f calcium voltage-gated channel subunit alpha1 F involved_in ISO (PMID:7571473) UniProt PMID:7571473 NCBI chrNW_004624893:945,378...968,041
Ensembl chrNW_004624893:945,436...970,431 		JBrowse link
G Cacna2d4 calcium voltage-gated channel auxiliary subunit alpha2delta 4 involved_in ISO (PMID:17033974) UniProt PMID:17033974 NCBI chrNW_004624735:10,998,772...11,101,781
Ensembl chrNW_004624735:10,998,440...11,096,340 		JBrowse link
G Cacnb4 calcium voltage-gated channel auxiliary subunit beta 4 acts_upstream_of_or_within ISO (PMID:16636205) MGI PMID:16636205 NCBI chrNW_004624866:4,973,087...5,287,477
Ensembl chrNW_004624866:4,973,207...5,281,746 		JBrowse link
G Ccdc66 coiled-coil domain containing 66 involved_in ISO (PMID:21680557) CACAO PMID:21680557 NCBI chrNW_004624822:625,327...658,528
Ensembl chrNW_004624822:617,862...655,803 		JBrowse link
G Cep250 centrosomal protein 250 involved_in ISO (PMID:30998843) UniProt PMID:30998843 NCBI chrNW_004624842:3,900,685...3,947,241
Ensembl chrNW_004624842:3,901,172...3,939,526 		JBrowse link
G Cngb1 cyclic nucleotide gated channel subunit beta 1 involved_in ISO (PMID:15557452) UniProt PMID:15557452 NCBI chrNW_004624746:28,198,324...28,268,280 JBrowse link
G Crb1 crumbs cell polarity complex component 1 acts_upstream_of_or_within ISO (PMID:22447858) MGI PMID:22447858 NCBI chrNW_004624798:2,861,481...2,999,387
Ensembl chrNW_004624798:2,861,520...2,999,697 		JBrowse link
G Gja10 gap junction protein alpha 10 acts_upstream_of_or_within ISO (PMID:16820008) MGI PMID:16820008 NCBI chrNW_004624799:4,278,097...4,279,588 JBrowse link
G Gnat1 G protein subunit alpha transducin 1 involved_in
acts_upstream_of_or_within		 IEA TreeGrafter
Ensembl		 GO_REF:0000107 GO_REF:0000118 NCBI chrNW_004624730:4,064,982...4,072,172
Ensembl chrNW_004624730:4,066,222...4,071,316 		JBrowse link
G Gnat2 G protein subunit alpha transducin 2 involved_in
acts_upstream_of_or_within		 ISO (PMID:12077706)
(PMID:17065522)		 UniProt
MGI		 PMID:12077706 PMID:17065522 NCBI chrNW_004624772:5,317,702...5,326,841
Ensembl chrNW_004624772:5,318,113...5,326,841 		JBrowse link
G Gnat3 G protein subunit alpha transducin 3 involved_in IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004624739:29,252,919...29,299,315
Ensembl chrNW_004624739:29,254,996...29,299,315 		JBrowse link
G Grm6 glutamate metabotropic receptor 6 involved_in ISO (PMID:17405131) UniProt PMID:17405131 NCBI chrNW_004624733:41,984,632...41,997,726
Ensembl chrNW_004624733:41,987,319...41,997,541 		JBrowse link
G Gucy2f guanylate cyclase 2F, retinal involved_in ISO (PMID:17255100) CACAO PMID:17255100 NCBI chrNW_004624803:6,510,264...6,683,046
Ensembl chrNW_004624803:6,509,114...6,683,046 		JBrowse link
G Prph2 peripherin 2 acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chrNW_004624754:16,685,512...16,699,145
Ensembl chrNW_004624754:16,685,378...16,700,111 		JBrowse link
G Rbp4 retinol binding protein 4 acts_upstream_of_or_within ISO (PMID:12484775) MGI PMID:12484775 NCBI chrNW_004624737:4,795,054...4,800,830
Ensembl chrNW_004624737:4,791,628...4,800,989 		JBrowse link
G Reep6 receptor accessory protein 6 involved_in ISO (PMID:27889058) UniProt PMID:27889058 NCBI chrNW_004624828:7,202,911...7,208,169
Ensembl chrNW_004624828:7,202,984...7,208,408 		JBrowse link
G Rgs9bp regulator of G protein signaling 9 binding protein acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chrNW_004624794:7,545,832...7,552,478
Ensembl chrNW_004624794:7,545,852...7,546,559 		JBrowse link
G Rom1 retinal outer segment membrane protein 1 acts_upstream_of_or_within ISO (PMID:28053051) MGI PMID:28053051 NCBI chrNW_004624926:1,140,082...1,142,434
Ensembl chrNW_004624926:1,140,793...1,142,253 		JBrowse link
G Rpe65 retinoid isomerohydrolase RPE65 involved_in ISO (PMID:15557452) UniProt PMID:15557452 NCBI chrNW_004624742:27,302,222...27,319,549
Ensembl chrNW_004624742:27,302,453...27,319,203 		JBrowse link
G Rpgrip1 RPGR interacting protein 1 involved_in ISO (PMID:21521437) CACAO PMID:21521437 NCBI chrNW_004624825:7,289,385...7,366,388
Ensembl chrNW_004624825:7,296,662...7,366,196 		JBrowse link
G Sema5a semaphorin 5A acts_upstream_of_or_within ISO (PMID:21835343) MGI PMID:21835343 NCBI chrNW_004624751:6,429,814...6,913,673
Ensembl chrNW_004624751:6,436,854...6,738,216 		JBrowse link
G Sema5b semaphorin 5B acts_upstream_of_or_within ISO (PMID:21835343) MGI PMID:21835343 NCBI chrNW_004624912:1,244,801...1,370,253
Ensembl chrNW_004624912:1,244,801...1,280,609 		JBrowse link
G Tulp1 TUB like protein 1 involved_in ISO (PMID:15557452) UniProt PMID:15557452 NCBI chrNW_004624754:21,961,513...21,971,362 JBrowse link
Term paths to the root
Path 1
Term Annotations click to browse term
  biological_process 17650
    multicellular organismal process 7715
      system process 2857
        nervous system process 2156
          sensory perception 1495
            sensory perception of light stimulus 136
              visual perception 130
                detection of light stimulus involved in visual perception 24
                visual perception involved in equilibrioception 0
paths to the root