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ONTOLOGY REPORT - ANNOTATIONS


Term:central nervous system development
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Accession:GO:0007417 term browser browse the term
Definition:The process whose specific outcome is the progression of the central nervous system over time, from its formation to the mature structure. The central nervous system is the core nervous system that serves an integrating and coordinating function. In vertebrates it consists of the brain and spinal cord. In those invertebrates with a central nervous system it typically consists of a brain, cerebral ganglia and a nerve cord.
Synonyms:exact_synonym: CNS development
 xref: Wikipedia:Neural_development



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central nervous system development term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Acan aggrecan involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr 1:142,390,951...142,453,779 JBrowse link
G Adgra2 adhesion G protein-coupled receptor A2 involved_in IBA
ISO
GO_REF:0000033
(PMID:21071672)
GO_Central
RGD
PMID:21071672 GO_REF:0000033 NCBI chr16:64,932,964...64,971,433 JBrowse link
G Ahi1 Abelson helper integration site 1 involved_in ISS GO_REF:0000024 UniProt GO_REF:0000024 NCBI chr 1:17,580,859...17,711,775 JBrowse link
G Aldh3a2 aldehyde dehydrogenase 3 family, member A2 involved_in IEA
ISO
GO_REF:0000107
(PMID:8528251)
Ensembl
RGD
PMID:8528251 GO_REF:0000107 NCBI chr10:46,427,789...46,448,449 JBrowse link
G Aldh5a1 aldehyde dehydrogenase 5 family, member A1 involved_in TAS
IEA
ISO
ISS
PMID:7814412
GO_REF:0000107
(PMID:9683595)
GO_REF:0000024
Ensembl
RGD
UniProt
PMID:9683595 PMID:7814412 GO_REF:0000024 GO_REF:0000107, RGD:632258 NCBI chr17:40,132,339...40,158,677 JBrowse link
G Ankle2 ankyrin repeat and LEM domain containing 2 involved_in ISS
IEA
ISO
GO_REF:0000024
GO_REF:0000107
(PMID:25259927)
UniProt
Ensembl
RGD
PMID:25259927 GO_REF:0000024 GO_REF:0000107 NCBI chr12:46,418,142...46,451,304 JBrowse link
G Aplp1 amyloid beta precursor like protein 1 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr 1:85,696,880...85,707,215 JBrowse link
G Aplp2 amyloid beta precursor like protein 2 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr 8:29,599,230...29,662,311 JBrowse link
G App amyloid beta precursor protein involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr11:37,506,207...37,724,351 JBrowse link
G Arnt2 aryl hydrocarbon receptor nuclear translocator 2 involved_in ISO (PMID:11318878) RGD PMID:11318878 NCBI chr 1:147,645,354...147,801,986 JBrowse link
G B3gnt5 UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltransferase 5 involved_in ISO (PMID:11384981) RGD PMID:11384981 NCBI chr11:94,645,480...94,657,584 JBrowse link
G Bcan brevican involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr 2:173,454,479...173,467,717 JBrowse link
G Bscl2 BSCL2 lipid droplet biogenesis associated, seipin involved_in ISO (PMID:30735131) RGD PMID:30735131 NCBI chr 1:205,731,828...205,743,430 JBrowse link
G Capg capping actin protein, gelsolin like involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr 4:106,152,912...106,170,010 JBrowse link
G Chd7 chromodomain helicase DNA binding protein 7 involved_in ISO
IBA
(PMID:9556299)
GO_REF:0000033
RGD
GO_Central
PMID:9556299 GO_REF:0000033 NCBI chr 5:21,812,007...21,995,358 JBrowse link
G Chrd chordin acts_upstream_of_or_within ISO MGI:2157350 (PMID:10688202) RGD PMID:10688202 NCBI chr11:80,171,994...80,181,166 JBrowse link
G Cited2 Cbp/p300-interacting transactivator, with Glu/Asp-rich carboxy-terminal domain, 2 acts_upstream_of_or_within ISO MGI:2176158 (PMID:11823447) RGD PMID:11823447 NCBI chr 1:12,312,426...12,314,869 JBrowse link
G Col2a1 collagen type II alpha 1 chain involved_in IEA
ISO
GO_REF:0000107
(PMID:9119111)
Ensembl
RGD
PMID:9119111 GO_REF:0000107 NCBI chr 7:130,977,561...131,006,627 JBrowse link
G Cox7b cytochrome c oxidase subunit 7B involved_in ISS
ISO
GO_REF:0000024
(PMID:23122588)
UniProt
RGD
PMID:23122588 GO_REF:0000024 NCBI chr  X:71,083,486...71,089,733 JBrowse link
G Cyp26a1 cytochrome P450, family 26, subfamily a, polypeptide 1 acts_upstream_of_or_within
involved_in
ISO
IBA
MGI:2183292|MGI:2679699 (PMID:17067568)
GO_REF:0000033
RGD
GO_Central
PMID:17067568 GO_REF:0000033 NCBI chr 1:235,471,368...235,475,204 JBrowse link
G Cyp26b1 cytochrome P450, family 26, subfamily b, polypeptide 1 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr 4:117,041,808...117,058,628 JBrowse link
G Cyp26c1 cytochrome P450, family 26, subfamily C, polypeptide 1 acts_upstream_of_or_within
involved_in
ISO
IBA
MGI:1096359 (PMID:17067568)
GO_REF:0000033
RGD
GO_Central
PMID:17067568 GO_REF:0000033 NCBI chr 1:235,458,961...235,468,433 JBrowse link
G Dhx30 DExH-box helicase 30 involved_in ISS
ISO
IEA
GO_REF:0000024
(PMID:25219788)
GO_REF:0000107
UniProt
RGD
Ensembl
PMID:25219788 GO_REF:0000024 GO_REF:0000107 NCBI chr 8:110,064,751...110,096,954 JBrowse link
G Dmbx1 diencephalon/mesencephalon homeobox 1 involved_in ISO (PMID:12055180) RGD PMID:12055180 NCBI chr 5:129,394,221...129,403,040 JBrowse link
G Dner delta/notch-like EGF repeat containing involved_in ISO (PMID:11950833) RGD PMID:11950833 NCBI chr 9:93,035,108...93,350,568 JBrowse link
G Drp2 dystrophin related protein 2 involved_in IEA GO_REF:0000002 InterPro GO_REF:0000002 NCBI chr  X:97,607,577...97,658,117 JBrowse link
G Dscam DS cell adhesion molecule involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr11:35,921,924...36,507,100 JBrowse link
G Dscaml1 DS cell adhesion molecule-like 1 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr 8:54,637,054...54,954,042 JBrowse link
G Ecrg4 ECRG4 augurin precursor involved_in ISS
IBA
PMID:21349154
GO_REF:0000033
GO_Central PMID:21349154 GO_REF:0000033, RGD:14695077 NCBI chr 9:45,992,954...46,012,605 JBrowse link
G Eif2b2 eukaryotic translation initiation factor 2B subunit beta involved_in ISS
ISO
GO_REF:0000024
(PMID:15776425)
UniProt
RGD
PMID:15776425 GO_REF:0000024 NCBI chr 6:104,866,926...104,873,351 JBrowse link
G Elp3 elongator acetyltransferase complex subunit 3 involved_in ISO (PMID:19185337) RGD PMID:19185337 NCBI chr15:39,754,635...39,816,482 JBrowse link
G Emx1 empty spiracles homeobox 1 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr 4:117,725,148...117,741,616 JBrowse link
G Emx2 empty spiracles homeobox 2 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr 1:258,626,584...258,633,594 JBrowse link
G Evl Enah/Vasp-like involved_in NAS PMID:9268706 UniProt PMID:9268706 RGD:728214 NCBI chr 6:127,473,119...127,594,342 JBrowse link
G Fkrp fukutin related protein acts_upstream_of_or_within ISO MGI:4834518 (PMID:20675713) RGD PMID:20675713 NCBI chr 1:77,479,641...77,486,954 JBrowse link
G Fmr1 fragile X messenger ribonucleoprotein 1 acts_upstream_of_or_within ISO MGI:2451086 (PMID:12700164) RGD PMID:12700164 NCBI chr  X:147,240,239...147,278,057 JBrowse link
G Gabra4 gamma-aminobutyric acid type A receptor subunit alpha 4 acts_upstream_of_or_within ISO MGI:3691193|MGI:3691194|MGI:3704092 (PMID:17005728) RGD PMID:17005728 NCBI chr14:36,590,782...36,667,724 JBrowse link
G Gba1 glucosylceramidase beta 1 acts_upstream_of_or_within ISO (PMID:18346921) RGD PMID:18346921 NCBI chr 2:176,902,141...176,916,015 JBrowse link
G Gba2 glucosylceramidase beta 2 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr 5:57,822,389...57,834,522 JBrowse link
G Gli3 GLI family zinc finger 3 acts_upstream_of_or_within ISO MGI:108075|MGI:1856276 (PMID:12435628), (PMID:12435629) RGD PMID:12435628 PMID:12435629 NCBI chr17:54,134,064...54,405,198 JBrowse link
G Glis2 GLIS family zinc finger 2 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr10:11,457,594...11,484,948 JBrowse link
G Grhl3 grainyhead-like transcription factor 3 acts_upstream_of_or_within ISO MGI:1856837 (PMID:11787818) RGD PMID:11787818 NCBI chr 5:147,774,161...147,806,291 JBrowse link
G Gsn gelsolin involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr 3:38,982,605...39,035,849 JBrowse link
G Gsx1 GS homeobox 1 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr12:7,880,663...7,882,947 JBrowse link
G Gsx2 GS homeobox 2 acts_upstream_of_or_within ISO MGI:2150162 (PMID:11731457), (PMID:12724834) RGD PMID:11731457 PMID:12724834 NCBI chr14:33,123,799...33,126,151 JBrowse link
G Hapln1 hyaluronan and proteoglycan link protein 1 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr 2:20,631,640...20,696,388 JBrowse link
G Hapln2 hyaluronan and proteoglycan link protein 2 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr 2:173,488,909...173,496,824 JBrowse link
G Hapln3 hyaluronan and proteoglycan link protein 3 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr 1:142,455,828...142,473,877 JBrowse link
G Hapln4 hyaluronan and proteoglycan link protein 4 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr16:19,333,106...19,341,243 JBrowse link
G Helt helt bHLH transcription factor acts_upstream_of_or_within ISO MGI:3703237 (PMID:16968817) RGD PMID:16968817 NCBI chr16:45,991,227...45,993,045 JBrowse link
G Htt huntingtin acts_upstream_of_or_within ISO MGI:3697906 (PMID:9398841) RGD PMID:9398841 NCBI chr14:75,845,836...75,996,094 JBrowse link
G Id3 inhibitor of DNA binding 3 involved_in ISO (PMID:7655079) RGD PMID:7655079 NCBI chr 5:153,656,253...153,657,860 JBrowse link
G Lig4 DNA ligase 4 acts_upstream_of_or_within ISO MGI:1857720|MGI:1857732|MGI:98834 (PMID:10911993), (PMID:9875844), (PMID:9889105) RGD PMID:9875844 PMID:9889105 PMID:10911993 NCBI chr16:79,518,393...79,526,956 JBrowse link
G Lmx1a LIM homeobox transcription factor 1 alpha acts_upstream_of_or_within ISO MGI:1888413 (PMID:15148302) RGD PMID:15148302 NCBI chr13:79,834,614...79,978,253 JBrowse link
G Marcks myristoylated alanine rich protein kinase C substrate involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr20:42,240,185...42,245,882 JBrowse link
G Marcksl1 MARCKS-like 1 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr 5:147,135,827...147,138,150 JBrowse link
G Mir124-1 microRNA 124-1 acts_upstream_of_or_within ISO (PMID:17403776) RGD PMID:17403776 NCBI chr15:38,842,014...38,842,098 JBrowse link
G Mir124-2 microRNA 124-2 acts_upstream_of_or_within ISO (PMID:17403776) RGD PMID:17403776 NCBI chr 2:100,134,866...100,134,974 JBrowse link
G Mir124-3 microRNA 124-3 acts_upstream_of_or_within ISO (PMID:17403776) RGD PMID:17403776 NCBI chr 3:168,014,952...168,015,038 JBrowse link
G Mnx1 motor neuron and pancreas homeobox 1 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr 4:5,866,506...5,871,465 JBrowse link
G Msi1 musashi RNA-binding protein 1 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr12:41,158,301...41,251,134 JBrowse link
G Msi2 musashi RNA-binding protein 2 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr10:73,640,960...74,007,497 JBrowse link
G Mtf1 metal-regulatory transcription factor 1 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr 5:137,062,319...137,107,136 JBrowse link
G Ncan neurocan involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr16:19,301,969...19,328,436 JBrowse link
G Ndn necdin, MAGE family member acts_upstream_of_or_within ISO MGI:2653048 (PMID:15649943) RGD PMID:15649943 NCBI chr 1:115,849,168...115,850,767 JBrowse link
G Ngfr nerve growth factor receptor involved_in
acts_upstream_of_or_within
IEA
ISO
GO_REF:0000107
MGI:1857226 (PMID:11978834)
Ensembl
RGD
PMID:11978834 GO_REF:0000107 NCBI chr10:81,012,077...81,030,305 JBrowse link
G Nog noggin acts_upstream_of_or_within ISO MGI:1862000 (PMID:10688202) RGD PMID:10688202 NCBI chr10:74,625,874...74,627,501 JBrowse link
G Noto notochord homeobox involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr 4:117,961,163...117,965,402 JBrowse link
G Nrcam neuronal cell adhesion molecule involved_in ISS
ISO
IEA
GO_REF:0000024
(PMID:12182881)
GO_REF:0000107
(PMID:35108495)
UniProt
RGD
Ensembl
PMID:12182881 PMID:35108495 GO_REF:0000024 GO_REF:0000107 NCBI chr 6:61,402,813...61,698,536 JBrowse link
G Otx2 orthodenticle homeobox 2 acts_upstream_of_or_within ISO MGI:1857510|MGI:2150146|MGI:2661067 (PMID:11731459), (PMID:12652306) RGD PMID:11731459 PMID:12652306 NCBI chr15:21,942,233...21,953,034 JBrowse link
G Pax2 paired box 2 involved_in ISO (PMID:1723950) RGD PMID:1723950 NCBI chr 1:243,616,509...243,697,454 JBrowse link
G Pax8 paired box 8 involved_in ISO (PMID:15494458)
(PMID:1723950)
RGD PMID:1723950 PMID:15494458 NCBI chr 3:27,584,000...27,641,094 JBrowse link
G Pias4 protein inhibitor of activated STAT, 4 acts_upstream_of_or_within ISO (PMID:10854042) RGD PMID:10854042 NCBI chr 7:8,546,312...8,559,838 JBrowse link
G Pten phosphatase and tensin homolog acts_upstream_of_or_within ISO MGI:2183285 (PMID:12091320) RGD PMID:12091320 NCBI chr 1:240,043,707...240,110,330 JBrowse link
G Reln reelin involved_in
acts_upstream_of_or_within
ISS
IBA
ISO
IEA
GO_REF:0000024
GO_REF:0000033
MGI:1856398 (PMID:11900467)
GO_REF:0000002
UniProt
GO_Central
RGD
InterPro
PMID:11900467 GO_REF:0000002 GO_REF:0000024 GO_REF:0000033 NCBI chr 4:12,736,177...13,162,956 JBrowse link
G Runx1 RUNX family transcription factor 1 acts_upstream_of_or_within ISO MGI:3043614 (PMID:16174759) RGD PMID:16174759 NCBI chr11:45,325,778...45,560,300 JBrowse link
G Scin scinderin involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr 6:62,836,641...62,915,287 JBrowse link
G Sema6b semaphorin 6B involved_in ISS
ISO
GO_REF:0000024
(PMID:32169168)
UniProt
RGD
PMID:32169168 GO_REF:0000024 NCBI chr 9:950,939...967,905 JBrowse link
G Shh sonic hedgehog signaling molecule involved_in
acts_upstream_of_or_within
ISS
ISO
GO_REF:0000024
(PMID:12435628)
UniProt
RGD
PMID:12435628 GO_REF:0000024 NCBI chr 4:6,954,017...6,963,170 JBrowse link
G Slc2a1 solute carrier family 2 member 1 acts_upstream_of_or_within ISO (PMID:10227690), (PMID:1714544) RGD PMID:1714544 PMID:10227690 NCBI chr 5:138,002,522...138,030,742 JBrowse link
G Smo smoothened, frizzled class receptor involved_in
acts_upstream_of_or_within
IBA
ISO
GO_REF:0000033
MGI:95729 (PMID:12435628)
GO_Central
RGD
PMID:12435628 GO_REF:0000033 NCBI chr 4:59,311,084...59,341,280 JBrowse link
G Sox6 SRY-box transcription factor 6 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr 1:169,723,306...170,334,846 JBrowse link
G Sox9 SRY-box transcription factor 9 involved_in ISO (PMID:9119111) RGD PMID:9119111 NCBI chr10:98,305,744...98,311,250 JBrowse link
G Sptbn1 spectrin, beta, non-erythrocytic 1 involved_in ISO (PMID:34211179) RGD PMID:34211179 NCBI chr14:103,841,713...104,016,900 JBrowse link
G Stk3 serine/threonine kinase 3 involved_in
acts_upstream_of_or_within
IEA
ISO
GO_REF:0000107
MGI:1929004 (PMID:19786569)
Ensembl
RGD
PMID:19786569 GO_REF:0000107 NCBI chr 7:67,938,341...68,208,472 JBrowse link
G Stk4 serine/threonine kinase 4 acts_upstream_of_or_within ISO MGI:1928487 (PMID:19786569) RGD PMID:19786569 NCBI chr 3:173,165,238...173,247,135 JBrowse link
G Szt2 SZT2 subunit of KICSTOR complex involved_in
acts_upstream_of_or_within
ISS
ISO
GO_REF:0000024
MGI:4353996 (PMID:19624305)
UniProt
RGD
PMID:19624305 GO_REF:0000024 NCBI chr 5:137,182,648...137,229,349 JBrowse link
G Thoc6 THO complex subunit 6 involved_in ISS
ISO
GO_REF:0000024
(PMID:23621916)
UniProt
RGD
PMID:23621916 GO_REF:0000024 NCBI chr10:12,700,051...12,705,411 JBrowse link
G Tlx1 T-cell leukemia, homeobox 1 acts_upstream_of_or_within ISO MGI:1857260 (PMID:12023301) RGD PMID:12023301 NCBI chr 1:244,005,057...244,011,318 JBrowse link
G Tlx3 T-cell leukemia, homeobox 3 acts_upstream_of_or_within ISO MGI:1857260 (PMID:12023301) RGD PMID:12023301 NCBI chr10:17,789,706...17,792,207 JBrowse link
G Tp53 tumor protein p53 acts_upstream_of_or_within ISO MGI:1335098 (PMID:16199867) RGD PMID:16199867 NCBI chr10:54,798,871...54,810,300 JBrowse link
G Tp53bp2 tumor protein p53 binding protein, 2 acts_upstream_of_or_within ISO MGI:3625686 (PMID:16702401) RGD PMID:16702401 NCBI chr13:96,620,429...96,677,090 JBrowse link
G Tpp1 tripeptidyl peptidase 1 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr 1:160,097,984...160,104,108 JBrowse link
G Vax1 ventral anterior homeobox 1 acts_upstream_of_or_within
involved_in
ISO
IBA
MGI:1859863|MGI:1859922 (PMID:10601035), (PMID:10601036)
GO_REF:0000033
RGD
GO_Central
PMID:10601035 PMID:10601036 GO_REF:0000033 NCBI chr 1:258,324,571...258,342,396 JBrowse link
G Vax2 ventral anterior homeobox 2 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr 4:116,195,528...116,219,597 JBrowse link
G Vcan versican involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr 2:20,761,718...20,860,637 JBrowse link
G Vps13b vacuolar protein sorting 13 homolog B involved_in ISO (PMID:31495077) RGD PMID:31495077 NCBI chr 7:66,557,862...67,128,429 JBrowse link
G Vps4b vacuolar protein sorting 4 homolog B acts_upstream_of_or_within ISO (PMID:28675177) RGD PMID:28675177 NCBI chr13:22,907,105...22,932,200 JBrowse link
G Vsnl1 visinin-like 1 involved_in TAS PMID:1375457 PINC PMID:1375457 RGD:730244 NCBI chr 6:39,757,721...39,878,556 JBrowse link
G Xrcc4 X-ray repair cross complementing 4 acts_upstream_of_or_within ISO MGI:1926771 (PMID:9875844) RGD PMID:9875844 NCBI chr 2:20,948,464...21,197,705 JBrowse link
G Zbtb16 zinc finger and BTB domain containing 16 involved_in ISS GO_REF:0000024 UniProt GO_REF:0000024 NCBI chr 8:57,885,886...58,073,507 JBrowse link
G Zeb1 zinc finger E-box binding homeobox 1 involved_in
acts_upstream_of_or_within
IEA
IBA
ISO
GO_REF:0000107
GO_REF:0000033
MGI:1344407 (PMID:16598713)
Ensembl
GO_Central
RGD
PMID:16598713 GO_REF:0000033 GO_REF:0000107 NCBI chr17:56,644,397...56,811,155 JBrowse link
G Zeb2 zinc finger E-box binding homeobox 2 acts_upstream_of_or_within
involved_in
ISO
IBA
MGI:1344313 (PMID:16598713)
GO_REF:0000033
RGD
GO_Central
PMID:16598713 GO_REF:0000033 NCBI chr 3:29,214,581...29,344,890 JBrowse link
G Zic1 Zic family member 1 acts_upstream_of_or_within ISO MGI:106679|MGI:2156822 (PMID:11756505), (PMID:9412507) RGD PMID:9412507 PMID:11756505 NCBI chr 8:100,785,282...100,797,716 JBrowse link
G Zic2 Zic family member 2 acts_upstream_of_or_within
involved_in
ISO
IBA
MGI:106683 (PMID:11756505)
GO_REF:0000033
RGD
GO_Central
PMID:11756505 GO_REF:0000033 NCBI chr15:99,576,697...99,581,522 JBrowse link
G Zic3 Zic family member 3 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr  X:136,123,662...136,129,627 JBrowse link
G Zic4 Zic family member 4 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr 8:91,916,356...91,936,525 JBrowse link
G Zic5 Zic family member 5 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr15:99,558,285...99,567,023 JBrowse link
abducens nucleus development term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Atf2 activating transcription factor 2 involved_in IEA
ISO
GO_REF:0000107
MGI:3720850 (PMID:21533046)
Ensembl
RGD
PMID:21533046 GO_REF:0000107 NCBI chr 3:79,125,814...79,202,896 JBrowse link
adenohypophysis development term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Drd2 dopamine receptor D2 acts_upstream_of_or_within ISO MGI:3576789 (PMID:9140068) RGD PMID:9140068 NCBI chr 8:58,605,403...58,669,339 JBrowse link
G Ghrh growth hormone releasing hormone acts_upstream_of_or_within TAS
ISO
MGI:3051561 (PMID:15985453) RGD PMID:15985453 PMID:12511850 RGD:1601329 NCBI chr 3:145,992,762...146,012,528 JBrowse link
G Ghrhr growth hormone releasing hormone receptor acts_upstream_of_or_within ISO MGI:1856425 (PMID:1270792), (PMID:1329576), (PMID:1504465) RGD PMID:1270792 PMID:1329576 PMID:1504465 NCBI chr 4:84,498,159...84,532,851 JBrowse link
G Gsx1 GS homeobox 1 acts_upstream_of_or_within ISO MGI:2154448 (PMID:8631293) RGD PMID:8631293 NCBI chr12:7,880,663...7,882,947 JBrowse link
G Hes1 hes family bHLH transcription factor 1 involved_in
acts_upstream_of_or_within
IEA
ISO
GO_REF:0000107
MGI:3808031 (PMID:18996108)
Ensembl
RGD
PMID:18996108 GO_REF:0000107 NCBI chr11:70,705,763...70,708,176 JBrowse link
G Pou1f1 POU class 1 homeobox 1 IMP RGD PMID:16216912 RGD:1601440 NCBI chr11:3,316,818...3,334,804 JBrowse link
G Prop1 PROP paired-like homeobox 1 acts_upstream_of_or_within ISO (PMID:18996108) RGD PMID:18996108 NCBI chr10:35,271,959...35,274,434 JBrowse link
G Slc6a3 solute carrier family 6 member 3 acts_upstream_of_or_within ISO MGI:2386303 (PMID:9247269) RGD PMID:9247269 NCBI chr 1:31,537,990...31,578,962 JBrowse link
G Sox2 SRY-box transcription factor 2 acts_upstream_of_or_within IEP
ISO
MGI:2449045 (PMID:16932809) RGD PMID:16932809 PMID:21815952 RGD:8661681 NCBI chr 2:117,536,929...117,539,340 JBrowse link
adenohypophysis morphogenesis term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Duox2 dual oxidase 2 involved_in
acts_upstream_of_or_within
IEA
ISO
GO_REF:0000107
MGI:3712359 (PMID:17440044)
Ensembl
RGD
PMID:17440044 GO_REF:0000107 NCBI chr 3:129,680,543...129,698,886 JBrowse link
amacrine cell differentiation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Barhl2 BarH-like homeobox 2 acts_upstream_of_or_within ISO (PMID:14998930) RGD PMID:14998930 NCBI chr14:3,340,465...3,345,362 JBrowse link
G Bhlhe22 basic helix-loop-helix family, member e22 acts_upstream_of_or_within ISO MGI:3707409 (PMID:17092954) RGD PMID:17092954 NCBI chr 2:100,486,400...100,489,510 JBrowse link
G Foxn4 forkhead box N4 acts_upstream_of_or_within
involved_in
ISO MGI:3054789 (PMID:15363391) RGD PMID:15363391 NCBI chr12:42,336,706...42,359,932 JBrowse link
G Gdf11 growth differentiation factor 11 acts_upstream_of ISO (PMID:15976303) RGD PMID:15976303 NCBI chr 7:1,311,732...1,325,211 JBrowse link
G Hes1 hes family bHLH transcription factor 1 involved_in
acts_upstream_of
IEA
ISO
GO_REF:0000107
MGI:2149672 (PMID:16038893)
Ensembl
RGD
PMID:16038893 GO_REF:0000107 NCBI chr11:70,705,763...70,708,176 JBrowse link
G Ikzf1 IKAROS family zinc finger 1 acts_upstream_of_or_within ISO (PMID:25654255) RGD PMID:25654255 NCBI chr14:86,255,065...86,340,839 JBrowse link
G Miat myocardial infarction associated transcript acts_upstream_of_or_within ISO (PMID:20459797) RGD PMID:20459797 NCBI chr12:44,414,620...44,429,852 JBrowse link
G Neurod1 neuronal differentiation 1 involved_in ISS
ISO
GO_REF:0000024
(PMID:11861467)
UniProt
RGD
PMID:11861467 GO_REF:0000024 NCBI chr 3:64,359,554...64,363,526 JBrowse link
G Neurod4 neuronal differentiation 4 involved_in ISO (PMID:11861467) RGD PMID:11861467 NCBI chr 7:7,090,048...7,102,018 JBrowse link
G Ptf1a pancreas associated transcription factor 1a involved_in
acts_upstream_of_or_within
ISS
ISO
GO_REF:0000024
(PMID:17075007)
MGI:3701996 (PMID:17301087)
UniProt
RGD
PMID:17075007 PMID:17301087 GO_REF:0000024 NCBI chr17:82,051,281...82,053,135 JBrowse link
G Rorb RAR-related orphan receptor B involved_in ISS
ISO
GO_REF:0000024
(PMID:23652001)
UniProt
RGD
PMID:23652001 GO_REF:0000024 NCBI chr 1:216,363,629...216,544,390 JBrowse link
G Tgif1 TGFB-induced factor homeobox 1 acts_upstream_of ISO (PMID:18973577) RGD PMID:18973577 NCBI chr 9:110,748,094...110,757,714 JBrowse link
G Tgif2 TGFB-induced factor homeobox 2 acts_upstream_of ISO (PMID:18926818) RGD PMID:18926818 NCBI chr 3:165,791,101...165,808,669 JBrowse link
ammon gyrus development term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Lrp8 LDL receptor related protein 8 involved_in ISO (PMID:18778775) RGD PMID:18778775 NCBI chr 5:127,792,236...127,864,207 JBrowse link
amygdala development term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Atp1a2 ATPase Na+/K+ transporting subunit alpha 2 acts_upstream_of_or_within ISO (PMID:12805306) RGD PMID:12805306 NCBI chr13:84,729,597...84,754,544 JBrowse link
G Esr2 estrogen receptor 2 IEP RGD PMID:22791648 RGD:8694158 NCBI chr 6:100,589,553...100,645,240 JBrowse link
G Nf1 neurofibromin 1 involved_in
acts_upstream_of_or_within
IEA
ISO
GO_REF:0000107
MGI:1339975 (PMID:25242307)
Ensembl
RGD
PMID:25242307 GO_REF:0000107 NCBI chr10:64,803,986...65,037,086 JBrowse link
G Nr2e1 nuclear receptor subfamily 2, group E, member 1 acts_upstream_of_or_within ISO MGI:2151350 (PMID:12527005) RGD PMID:12527005 NCBI chr20:46,050,134...46,071,257 JBrowse link
G Pak1 p21 (RAC1) activated kinase 1 acts_upstream_of_or_within ISO MGI:97306 (PMID:25242307) RGD PMID:25242307 NCBI chr 1:161,522,399...161,637,623 JBrowse link
G Tbr1 T-box brain transcription factor 1 acts_upstream_of_or_within ISO MGI:2179766 (PMID:24441682) RGD PMID:24441682 NCBI chr 3:46,350,237...46,368,397 JBrowse link
G Uba6 ubiquitin-like modifier activating enzyme 6 acts_upstream_of_or_within ISO MGI:2176173|MGI:5509054 (PMID:23499007) RGD PMID:23499007 NCBI chr14:21,884,039...21,947,857 JBrowse link
anterior commissure morphogenesis term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Bhlhe22 basic helix-loop-helix family, member e22 acts_upstream_of_or_within ISO MGI:4440742 (PMID:22284184) RGD PMID:22284184 NCBI chr 2:100,486,400...100,489,510 JBrowse link
G Draxin dorsal inhibitory axon guidance protein involved_in ISO (PMID:23206892) RGD PMID:23206892 NCBI chr 5:163,813,308...163,846,609 JBrowse link
G Fbxo45 F-box protein 45 involved_in
acts_upstream_of_or_within
IEA
ISO
GO_REF:0000107
MGI:3849742 (PMID:19398581)
Ensembl
RGD
PMID:19398581 GO_REF:0000107 NCBI chr11:68,551,430...68,567,053 JBrowse link
G Nfib nuclear factor I/B involved_in ISS
ISO
GO_REF:0000024
(PMID:19961580)
UniProt
RGD
PMID:19961580 GO_REF:0000024 NCBI chr 5:101,805,168...102,020,618 JBrowse link
G Nr2e1 nuclear receptor subfamily 2, group E, member 1 acts_upstream_of_or_within ISO MGI:2176490 (PMID:11997145) RGD PMID:11997145 NCBI chr20:46,050,134...46,071,257 JBrowse link
G Plxna4 plexin A4 acts_upstream_of_or_within ISO MGI:3578655 (PMID:15814794) RGD PMID:15814794 NCBI chr 4:60,720,246...61,162,206 JBrowse link
G Tsku tsukushi, small leucine rich proteoglycan involved_in
acts_upstream_of_or_within
IEA
ISO
ISS
GO_REF:0000107
(PMID:23206892)
MGI:4867728 (PMID:21055390)
GO_REF:0000024
Ensembl
RGD
UniProt
PMID:21055390 PMID:23206892 GO_REF:0000024 GO_REF:0000107 NCBI chr 1:152,660,259...152,671,682 JBrowse link
G Wdr47 WD repeat domain 47 acts_upstream_of_or_within ISO MGI:4433065|MGI:6102912 (PMID:29078390) RGD PMID:29078390 NCBI chr 2:196,226,757...196,287,739 JBrowse link
astrocyte activation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Adora2a adenosine A2a receptor IMP RGD PMID:12838511 RGD:1625689 NCBI chr20:13,315,848...13,333,386 JBrowse link
G Ager advanced glycosylation end product-specific receptor involved_in ISO
IEA
UniProtKB:P05067 (PMID:15457210)
GO_REF:0000107
RGD
Ensembl
PMID:15457210 GO_REF:0000107 NCBI chr20:4,152,758...4,155,956 JBrowse link
G Agt angiotensinogen acts_upstream_of_or_within ISO MGI:2136636 (PMID:9734405) RGD PMID:9734405 NCBI chr19:69,426,540...69,447,017 JBrowse link
G App amyloid beta precursor protein involved_in ISO UniProtKB:P49768|UniProtKB:Q15109 (PMID:15457210), (PMID:20445063)
(PMID:18723082)
RGD PMID:15457210 PMID:18723082 PMID:20445063 NCBI chr11:37,506,207...37,724,351 JBrowse link
G Bace2 beta-secretase 2 IEP RGD PMID:21073551 RGD:13782176 NCBI chr11:36,707,447...36,789,550 JBrowse link
G C1qa complement C1q A chain involved_in IEA
ISO
GO_REF:0000107
UniProtKB:P05067 (PMID:15269255)
Ensembl
RGD
PMID:15269255 GO_REF:0000107 NCBI chr 5:154,417,086...154,419,933 JBrowse link
G C5ar1 complement C5a receptor 1 involved_in ISO UniProtKB:P05067 (PMID:19561098) RGD PMID:19561098 NCBI chr 1:76,948,622...76,959,826 JBrowse link
G Cntf ciliary neurotrophic factor involved_in IDA
IBA
spinal cord astrocytes
GO_REF:0000033
GO_Central
RGD
PMID:11771938 GO_REF:0000033, RGD:1626172 NCBI chr 1:209,887,854...209,889,877 JBrowse link
G Egfr epidermal growth factor receptor IMP RGD PMID:16837601 RGD:1581900 NCBI chr14:95,378,626...95,551,358 JBrowse link
G Ifng interferon gamma involved_in ISO (PMID:18375019)
UniProtKB:P05067 (PMID:20368278)
RGD PMID:18375019 PMID:20368278 NCBI chr 7:55,789,180...55,793,216 JBrowse link
G Ifngr1 interferon gamma receptor 1 involved_in ISO UniProtKB:P05067 (PMID:17255335) RGD PMID:17255335 NCBI chr 1:16,152,811...16,171,439 JBrowse link
G Il1b interleukin 1 beta involved_in
acts_upstream_of_or_within
IEA
ISO
GO_REF:0000107
(PMID:28377412)
Ensembl
RGD
PMID:28377412 GO_REF:0000107 NCBI chr 3:137,030,200...137,036,581 JBrowse link
G Mt2A metallothionein 2A IEP RGD PMID:19837066 RGD:6483825 NCBI chr19:10,837,934...10,838,708 JBrowse link
G Naglu N-acetyl-alpha-glucosaminidase acts_upstream_of_or_within ISO MGI:1934018 (PMID:26607664) RGD PMID:26607664 NCBI chr10:86,001,545...86,009,049 JBrowse link
G Psen1 presenilin 1 involved_in ISO UniProtKB:P05067 (PMID:20445063) RGD PMID:20445063 NCBI chr 6:109,054,160...109,106,191 JBrowse link
G Smo smoothened, frizzled class receptor involved_in
acts_upstream_of_or_within
IEA
ISO
GO_REF:0000107
MGI:2176256 (PMID:23680462)
Ensembl
RGD
PMID:23680462 GO_REF:0000107 NCBI chr 4:59,311,084...59,341,280 JBrowse link
G Trem2 triggering receptor expressed on myeloid cells 2 involved_in ISO UniProtKB:P10636 (PMID:29073081) RGD PMID:29073081 NCBI chr 9:12,647,605...12,654,190 JBrowse link
G Zeb2 zinc finger E-box binding homeobox 2 IDA RGD PMID:34852714 RGD:155882542 NCBI chr 3:29,214,581...29,344,890 JBrowse link
astrocyte activation involved in immune response term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G App amyloid beta precursor protein involved_in ISO
IEA
UniProtKB:A0A0R4J0I9|UniProtKB:P49768 (PMID:23152628)
GO_REF:0000107
RGD
Ensembl
PMID:23152628 GO_REF:0000107 NCBI chr11:37,506,207...37,724,351 JBrowse link
G Grn granulin precursor involved_in ISS
ISO
GO_REF:0000024
(PMID:20026663)
UniProt
RGD
PMID:20026663 GO_REF:0000024 NCBI chr10:87,387,672...87,393,777 JBrowse link
G Lrp1 LDL receptor related protein 1 involved_in ISO UniProtKB:P05067|UniProtKB:P49768 (PMID:23152628) RGD PMID:23152628 NCBI chr 7:65,265,639...65,346,196 JBrowse link
G Psen1 presenilin 1 involved_in ISO UniProtKB:A0A0R4J0I9|UniProtKB:P05067 (PMID:23152628) RGD PMID:23152628 NCBI chr 6:109,054,160...109,106,191 JBrowse link
astrocyte development term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ager advanced glycosylation end product-specific receptor acts_upstream_of_or_within ISO (PMID:22577135) RGD PMID:22577135 NCBI chr20:4,152,758...4,155,956 JBrowse link
G Dll1 delta like canonical Notch ligand 1 involved_in IEA
ISO
ISS
GO_REF:0000107
(PMID:23688253)
GO_REF:0000024
Ensembl
RGD
UniProt
PMID:23688253 GO_REF:0000024 GO_REF:0000107 NCBI chr 1:64,985,161...64,993,274 JBrowse link
G Drd1 dopamine receptor D1 involved_in
acts_upstream_of_or_within
IEA
ISO
GO_REF:0000107
MGI:2181426|MGI:3707260 (PMID:17360497)
Ensembl
RGD
PMID:17360497 GO_REF:0000107 NCBI chr17:10,545,488...10,550,029 JBrowse link
G Eif2b5 eukaryotic translation initiation factor 2B subunit epsilon involved_in ISO
ISS
(PMID:15723074)
GO_REF:0000024
RGD
UniProt
PMID:15723074 GO_REF:0000024 NCBI chr11:80,394,433...80,404,468 JBrowse link
G Gfap glial fibrillary acidic protein acts_upstream_of_or_within ISO MGI:98932 (PMID:11487638) RGD PMID:11487638 NCBI chr10:88,352,987...88,361,661 JBrowse link
G Lamb2 laminin subunit beta 2 involved_in
acts_upstream_of_or_within
IEA
ISO
GO_REF:0000107
MGI:1344394 (PMID:19907020)
Ensembl
RGD
PMID:19907020 GO_REF:0000107 NCBI chr 8:109,178,367...109,190,552 JBrowse link
G Lamc3 laminin subunit gamma 3 acts_upstream_of_or_within ISO MGI:99916 (PMID:19907020) RGD PMID:19907020 NCBI chr 3:15,165,220...15,226,697 JBrowse link
G Plp1 proteolipid protein 1 acts_upstream_of_or_within ISO MGI:1917997 (PMID:24038504) RGD PMID:24038504 NCBI chr  X:104,933,921...104,993,317 JBrowse link
G Ror1 receptor tyrosine kinase-like orphan receptor 1 IDA RGD PMID:15095375 RGD:11537371 NCBI chr 5:119,859,744...120,203,573 JBrowse link
G Ror2 receptor tyrosine kinase-like orphan receptor 2 IDA RGD PMID:15095375 RGD:11537371 NCBI chr17:12,124,749...12,300,044 JBrowse link
G S100a8 S100 calcium binding protein A8 acts_upstream_of_or_within ISO MGI:1338947 (PMID:22577135) RGD PMID:22577135 NCBI chr 2:178,464,095...178,465,223 JBrowse link
G S100a9 S100 calcium binding protein A9 involved_in
acts_upstream_of_or_within
IBA
ISO
GO_REF:0000033
MGI:88244 (PMID:22577135)
GO_Central
RGD
PMID:22577135 GO_REF:0000033 NCBI chr 2:178,487,941...178,490,622 JBrowse link
G Tlr4 toll-like receptor 4 involved_in
acts_upstream_of_or_within
IEA
ISO
GO_REF:0000107
(PMID:22577135)
Ensembl
RGD
PMID:22577135 GO_REF:0000107 NCBI chr 5:85,161,247...85,174,882 JBrowse link
G Tspan2 tetraspanin 2 acts_upstream_of_or_within ISO MGI:5556057|MGI:97623 (PMID:24038504) RGD PMID:24038504 NCBI chr 2:190,177,717...190,234,994 JBrowse link
G Vim vimentin involved_in
acts_upstream_of_or_within
IEA
ISO
GO_REF:0000107
MGI:95697 (PMID:11487638)
Ensembl
RGD
PMID:11487638 GO_REF:0000107 NCBI chr17:81,577,261...81,585,746 JBrowse link
astrocyte differentiation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Abcc1 ATP binding cassette subfamily C member 1 IMP RGD PMID:17141959 RGD:2303044 NCBI chr10:1,022,041...1,162,431 JBrowse link
G Actr3 actin related protein 3 IMP RGD PMID:23843614 RGD:8553949 NCBI chr13:39,353,413...39,396,509 JBrowse link
G Bmp2 bone morphogenetic protein 2 involved_in
acts_upstream_of
IEA
ISO
GO_REF:0000107
MGI:99414 (PMID:15882580)
Ensembl
RGD
PMID:15882580 GO_REF:0000107 NCBI chr 3:141,264,648...141,275,416 JBrowse link
G Cul4b cullin 4B involved_in ISO MGI:5500946 (PMID:26025376) RGD PMID:26025376 NCBI chr  X:122,154,332...122,192,299 JBrowse link
G Dab1 DAB adaptor protein 1 involved_in
acts_upstream_of
IEA
ISO
GO_REF:0000107
MGI:1857750 (PMID:18848628)
Ensembl
RGD
PMID:18848628 GO_REF:0000107 NCBI chr 5:118,392,953...119,513,625 JBrowse link
G Eif2b5 eukaryotic translation initiation factor 2B subunit epsilon involved_in ISO
ISS
(PMID:15723074)
GO_REF:0000024
RGD
UniProt
PMID:15723074 GO_REF:0000024 NCBI chr11:80,394,433...80,404,468 JBrowse link
G Eomes eomesodermin involved_in ISO (PMID:30186101) RGD PMID:30186101 NCBI chr 8:127,059,215...127,067,070 JBrowse link
G Fgfr3 fibroblast growth factor receptor 3 acts_upstream_of ISO MGI:1931521 (PMID:12574417) RGD PMID:12574417 NCBI chr14:81,211,800...81,227,215 JBrowse link
G Gap43 growth associated protein 43 acts_upstream_of_or_within ISO MGI:2180341 (PMID:15234344) RGD PMID:15234344 NCBI chr11:71,882,131...71,975,799 JBrowse link
G Hes5 hes family bHLH transcription factor 5 involved_in ISS
ISO
GO_REF:0000024
(PMID:15156153)
UniProt
RGD
PMID:15156153 GO_REF:0000024 NCBI chr 5:170,804,511...170,807,988 JBrowse link
G Hmbs hydroxymethylbilane synthase IEP RGD PMID:12917623 RGD:2301689 NCBI chr 8:53,570,364...53,577,758 JBrowse link
G Hmga2 high mobility group AT-hook 2 acts_upstream_of ISO (PMID:18640244) RGD PMID:18640244 NCBI chr 7:57,762,710...57,884,555 JBrowse link
G Id2 inhibitor of DNA binding 2 acts_upstream_of ISO MGI:3830733 (PMID:19109490) RGD PMID:19109490 NCBI chr 6:47,469,162...47,470,995 JBrowse link
G Id4 inhibitor of DNA binding 4 acts_upstream_of ISO MGI:88177 (PMID:15882580) RGD PMID:15882580 NCBI chr17:16,389,387...16,391,956 JBrowse link
G Large1 LARGE xylosyl- and glucuronyltransferase 1 acts_upstream_of_or_within ISO MGI:1856965|MGI:3510641 (PMID:16111892) RGD PMID:16111892 NCBI chr19:11,603,129...12,048,930 JBrowse link
G Lif LIF, interleukin 6 family cytokine IMP RGD PMID:17328769 RGD:2326156 NCBI chr14:83,354,602...83,364,053 JBrowse link
G Mfsd8 major facilitator superfamily domain containing 8 acts_upstream_of_or_within ISO (PMID:27654426) RGD PMID:27654426 NCBI chr 2:123,822,042...123,847,808 JBrowse link
G Mycn MYCN proto-oncogene, bHLH transcription factor involved_in
acts_upstream_of
IEA
ISO
GO_REF:0000107
(PMID:18640244)
Ensembl
RGD
PMID:18640244 GO_REF:0000107 NCBI chr 6:41,446,683...41,452,584 JBrowse link
G Naglu N-acetyl-alpha-glucosaminidase acts_upstream_of_or_within ISO MGI:1934018 (PMID:12111813) RGD PMID:12111813 NCBI chr10:86,001,545...86,009,049 JBrowse link
G Nf1 neurofibromin 1 acts_upstream_of ISO MGI:1857444|MGI:2176055|MGI:2176057 (PMID:10442636), (PMID:11297510), (PMID:9878702) RGD PMID:9878702 PMID:10442636 PMID:11297510 NCBI chr10:64,803,986...65,037,086 JBrowse link
G Nfix nuclear factor I X acts_upstream_of_or_within
involved_in
ISO MGI:3802571 (PMID:21800304)
MGI:3802571 (PMID:29106906)
RGD PMID:21800304 PMID:29106906 NCBI chr19:23,355,388...23,450,360 JBrowse link
G Nkx2-2 NK2 homeobox 2 acts_upstream_of_or_within ISO MGI:1932100 (PMID:19258013) RGD PMID:19258013 NCBI chr 3:134,619,701...134,630,282 JBrowse link
G Notch1 notch receptor 1 IDA RGD PMID:19378247 RGD:2325301 NCBI chr 3:29,676,040...29,721,613 JBrowse link
G Nr2e1 nuclear receptor subfamily 2, group E, member 1 acts_upstream_of ISO MGI:2176560 (PMID:14702088) RGD PMID:14702088 NCBI chr20:46,050,134...46,071,257 JBrowse link
G Nr3c1 nuclear receptor subfamily 3, group C, member 1 involved_in IEA
ISO
GO_REF:0000107
(PMID:29890290)
Ensembl
RGD
PMID:29890290 GO_REF:0000107 NCBI chr18:31,522,783...31,644,508 JBrowse link
G Pax6 paired box 6 involved_in
acts_upstream_of_or_within
IMP
ISO
IEA
(PMID:30186101)
MGI:1856155 (PMID:19258013)
GO_REF:0000107
RGD
Ensembl
PMID:19258013 PMID:30186101 PMID:22944581 GO_REF:0000107, RGD:8552357 NCBI chr 3:92,128,772...92,157,022 JBrowse link
G S100b S100 calcium binding protein B IEP RGD PMID:19147496 RGD:5508832 NCBI chr20:12,372,345...12,381,159 JBrowse link
G Shh sonic hedgehog signaling molecule acts_upstream_of ISO (PMID:10357934) RGD PMID:10357934 NCBI chr 4:6,954,017...6,963,170 JBrowse link
G Sox6 SRY-box transcription factor 6 IMP RGD PMID:15846364 RGD:1581115 NCBI chr 1:169,723,306...170,334,846 JBrowse link
G Stat3 signal transducer and activator of transcription 3 involved_in ISS
ISO
IEA
GO_REF:0000024
(PMID:15156153)
GO_REF:0000107
UniProt
RGD
Ensembl
PMID:15156153 GO_REF:0000024 GO_REF:0000107 NCBI chr10:86,311,528...86,363,513 JBrowse link
G Vax1 ventral anterior homeobox 1 acts_upstream_of_or_within ISO MGI:1859863 (PMID:15590934) RGD PMID:15590934 NCBI chr 1:258,324,571...258,342,396 JBrowse link
G Vps54 VPS54 subunit of GARP complex involved_in IEA
ISO
GO_REF:0000107
MGI:1857091 (PMID:29890290)
Ensembl
RGD
PMID:29890290 GO_REF:0000107 NCBI chr14:95,378,821...95,455,871 JBrowse link
astrocyte fate commitment term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Gcm1 glial cells missing transcription factor 1 acts_upstream_of_or_within ISO (PMID:14573516) RGD PMID:14573516 NCBI chr 8:78,925,687...78,938,924 JBrowse link
G Sox8 SRY-box transcription factor 8 acts_upstream_of_or_within ISO MGI:98371 (PMID:19490914) RGD PMID:19490914 NCBI chr10:14,584,829...14,589,818 JBrowse link
G Sox9 SRY-box transcription factor 9 acts_upstream_of_or_within ISO MGI:98370 (PMID:19490914) RGD PMID:19490914 NCBI chr10:98,305,744...98,311,250 JBrowse link
G Tal1 TAL bHLH transcription factor 1, erythroid differentiation factor acts_upstream_of_or_within ISO MGI:2176173|MGI:2661471 (PMID:16292311) RGD PMID:16292311 NCBI chr 5:128,586,776...128,600,976 JBrowse link
Bergmann glial cell differentiation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Abl1 ABL proto-oncogene 1, non-receptor tyrosine kinase acts_upstream_of_or_within ISO MGI:87860 (PMID:20980600) RGD PMID:20980600 NCBI chr 3:35,377,587...35,480,843 JBrowse link
G Abl2 ABL proto-oncogene 2, non-receptor tyrosine kinase acts_upstream_of_or_within ISO MGI:87859 (PMID:20980600) RGD PMID:20980600 NCBI chr13:71,223,902...71,319,770 JBrowse link
G Gfap glial fibrillary acidic protein acts_upstream_of_or_within ISO MGI:2183221 (PMID:10816608) RGD PMID:10816608 NCBI chr10:88,352,987...88,361,661 JBrowse link
G Gpr37l1 G protein-coupled receptor 37-like 1 acts_upstream_of
involved_in
ISO
IEA
MGI:5439169 (PMID:24062445)
GO_REF:0000107
RGD
Ensembl
PMID:24062445 GO_REF:0000107 NCBI chr13:46,598,574...46,605,421 JBrowse link
G Map2k1 mitogen activated protein kinase kinase 1 involved_in
acts_upstream_of_or_within
IEA
ISO
GO_REF:0000107
MGI:99511 (PMID:24431450)
Ensembl
RGD
PMID:24431450 GO_REF:0000107 NCBI chr 8:73,578,747...73,650,184 JBrowse link
G Mapk1 mitogen activated protein kinase 1 involved_in
acts_upstream_of_or_within
IEA
ISO
GO_REF:0000107
MGI:1346859 (PMID:24431450)
Ensembl
RGD
PMID:24431450 GO_REF:0000107 NCBI chr11:97,462,025...97,529,193 JBrowse link
G Mapk3 mitogen activated protein kinase 3 acts_upstream_of_or_within ISO MGI:1346858 (PMID:24431450) RGD PMID:24431450 NCBI chr 1:190,797,189...190,803,411 JBrowse link
G Plpp3 phospholipid phosphatase 3 acts_upstream_of_or_within
involved_in
ISO
IEA
MGI:2176173|MGI:3723633 (PMID:21319224)
GO_REF:0000107
RGD
Ensembl
PMID:21319224 GO_REF:0000107 NCBI chr 5:125,156,000...125,231,119 JBrowse link
G Ptpn11 protein tyrosine phosphatase, non-receptor type 11 involved_in
acts_upstream_of_or_within
IEA
ISO
GO_REF:0000107
MGI:1346866|MGI:4868451 (PMID:24431450)
Ensembl
RGD
PMID:24431450 GO_REF:0000107 NCBI chr12:41,026,079...41,085,577 JBrowse link
G Shh sonic hedgehog signaling molecule involved_in
acts_upstream_of_or_within
IEA
ISO
GO_REF:0000107
(PMID:10375501)
Ensembl
RGD
PMID:10375501 GO_REF:0000107 NCBI chr 4:6,954,017...6,963,170 JBrowse link
G Ttc21b tetratricopeptide repeat domain 21B acts_upstream_of_or_within ISO MGI:2152544|MGI:2179048|MGI:5587034 (PMID:29615573) RGD PMID:29615573 NCBI chr 3:71,269,425...71,343,936 JBrowse link
G Vim vimentin involved_in
acts_upstream_of_or_within
IEA
ISO
GO_REF:0000107
MGI:1931877 (PMID:10816608)
Ensembl
RGD
PMID:10816608 GO_REF:0000107 NCBI chr17:81,577,261...81,585,746 JBrowse link
brain development term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G AABR07063281.1 involved_in IEA GO_REF:0000107 Ensembl GO_REF:0000107
G Aatk apoptosis-associated tyrosine kinase involved_in
acts_upstream_of_or_within
IBA
ISO
GO_REF:0000033
MGI:5428170 (PMID:22573681)
GO_Central
RGD
PMID:22573681 GO_REF:0000033 NCBI chr10:105,789,171...105,825,634 JBrowse link
G Abcb6 ATP binding cassette subfamily B member 6 involved_in ISO (PMID:22100072) RGD PMID:22100072 NCBI chr 9:84,117,222...84,125,939 JBrowse link
G Abr ABR activator of RhoGEF and GTPase acts_upstream_of_or_within ISO MGI:88141 (PMID:11684658) RGD PMID:11684658 NCBI chr10:61,760,743...61,959,526 JBrowse link
G Ache acetylcholinesterase IEP RGD PMID:20147288 RGD:405855864 NCBI chr12:25,042,882...25,050,608 JBrowse link
G Adgrg1 adhesion G protein-coupled receptor G1 involved_in ISO (PMID:15044805) RGD PMID:15044805 NCBI chr19:10,003,963...10,041,122 JBrowse link
G Afg2a AFG2 AAA ATPase homolog A involved_in ISO (PMID:26299366) RGD PMID:26299366 NCBI chr 2:120,306,417...120,497,707 JBrowse link
G Aim2 absent in melanoma 2 involved_in ISO (PMID:32350463) RGD PMID:32350463 NCBI chr13:88,397,516...88,439,325 JBrowse link
G Ak7 adenylate kinase 7 acts_upstream_of_or_within ISO MGI:4315923|MGI:5431002 (PMID:18776131), (PMID:21746835) RGD PMID:18776131 PMID:21746835 NCBI chr 6:130,376,499...130,444,674 JBrowse link
G Alk ALK receptor tyrosine kinase acts_upstream_of_or_within ISO MGI:5700373 (PMID:17487225) RGD PMID:17487225 NCBI chr 6:28,631,431...29,351,321 JBrowse link
G Amigo1 adhesion molecule with Ig like domain 1 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr 2:195,823,138...195,828,593 JBrowse link
G Amigo2 adhesion molecule with Ig like domain 2 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr 7:128,391,493...128,394,589 JBrowse link
G Amigo3 adhesion molecule with Ig like domain 3 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr 8:108,741,899...108,743,425 JBrowse link
G Anapc7 anaphase promoting complex subunit 7 involved_in ISO (PMID:34942119) RGD PMID:34942119 NCBI chr12:34,131,214...34,160,819 JBrowse link
G Apaf1 apoptotic peptidase activating factor 1 acts_upstream_of_or_within ISO MGI:1928692 (PMID:9753321) RGD PMID:9753321 NCBI chr 7:27,381,392...27,466,772 JBrowse link
G Apod apolipoprotein D involved_in IEA GO_REF:0000002 InterPro GO_REF:0000002 NCBI chr11:82,936,216...82,957,264 JBrowse link
G Arl6 ARF like GTPase 6 acts_upstream_of_or_within ISO MGI:5310744 (PMID:22139371) RGD PMID:22139371 NCBI chr11:40,711,878...40,738,254 JBrowse link
G Arnt2 aryl hydrocarbon receptor nuclear translocator 2 involved_in ISS
ISO
GO_REF:0000024
(PMID:24022475)
UniProt
RGD
PMID:24022475 GO_REF:0000024 NCBI chr 1:147,645,354...147,801,986 JBrowse link
G Aspm assembly factor for spindle microtubules acts_upstream_of_or_within ISO (PMID:20823249) RGD PMID:20823249 NCBI chr13:53,625,584...53,674,489 JBrowse link
G Atm ATM serine/threonine kinase acts_upstream_of_or_within ISO MGI:104779 (PMID:16687486) RGD PMID:16687486 NCBI chr 8:62,724,939...62,829,040 JBrowse link
G Atoh1 atonal bHLH transcription factor 1 acts_upstream_of_or_within ISO MGI:2155983 (PMID:12223565) RGD PMID:12223565 NCBI chr 4:93,912,068...93,914,163 JBrowse link
G Atxn1 ataxin 1 involved_in ISS
IBA
ISO
GO_REF:0000024
GO_REF:0000033
(PMID:28288114)
UniProt
GO_Central
RGD
PMID:28288114 GO_REF:0000024 GO_REF:0000033 NCBI chr17:18,943,397...19,354,751 JBrowse link
G Atxn1l ataxin 1 like involved_in ISO
IBA
(PMID:28288114)
GO_REF:0000033
RGD
GO_Central
PMID:28288114 GO_REF:0000033 NCBI chr19:37,700,341...37,711,529 JBrowse link
G B3glct beta 3-glucosyltransferase acts_upstream_of_or_within ISO (PMID:31600785) RGD PMID:31600785 NCBI chr12:5,255,521...5,346,807 JBrowse link
G B4galt2 beta-1,4-galactosyltransferase 2 acts_upstream_of_or_within ISO MGI:3849305 (PMID:19265195) RGD PMID:19265195 NCBI chr 5:131,412,541...131,422,573 JBrowse link
G Bag6 BAG cochaperone 6 involved_in ISS
ISO
IEA
GO_REF:0000024
(PMID:16287848)
GO_REF:0000107
UniProt
RGD
Ensembl
PMID:16287848 GO_REF:0000024 GO_REF:0000107 NCBI chr20:3,675,938...3,690,414 JBrowse link
G Bbs7 Bardet-Biedl syndrome 7 acts_upstream_of_or_within ISO MGI:98715 (PMID:22228099) RGD PMID:22228099 NCBI chr 2:119,434,760...119,474,665 JBrowse link
G Bcr BCR activator of RhoGEF and GTPase acts_upstream_of_or_within ISO MGI:107771 (PMID:11684658) RGD PMID:11684658 NCBI chr20:13,468,732...13,596,333 JBrowse link
G Bglap bone gamma-carboxyglutamate protein involved_in ISS
ISO
GO_REF:0000024
(PMID:24074871)
UniProt
RGD
PMID:24074871 GO_REF:0000024 NCBI chr 2:176,136,341...176,137,318 JBrowse link
G Bmi1 BMI1 proto-oncogene, polycomb ring finger acts_upstream_of_or_within ISO MGI:1857632 (PMID:7926765) RGD PMID:7926765 NCBI chr17:81,332,175...81,341,625 JBrowse link
G Bptf bromodomain PHD finger transcription factor involved_in ISO (PMID:14609955) RGD PMID:14609955 NCBI chr10:92,480,007...92,582,485 JBrowse link
G Brca2 BRCA2, DNA repair associated involved_in
acts_upstream_of_or_within
IEA
ISO
GO_REF:0000107
MGI:2156556|MGI:2176173 (PMID:17476307)
Ensembl
RGD
PMID:17476307 GO_REF:0000107 NCBI chr12:4,895,092...4,939,340 JBrowse link
G Brinp1 BMP/retinoic acid inducible neural specific 1 involved_in IEA
ISO
GO_REF:0000107
(PMID:27042284)
Ensembl
RGD
PMID:27042284 GO_REF:0000107 NCBI chr 5:82,348,501...82,550,506 JBrowse link
G C2cd3 C2 domain containing 3 centriole elongation regulator acts_upstream_of_or_within ISO (PMID:19004860) RGD PMID:19004860 NCBI chr 1:164,127,304...164,225,088 JBrowse link
G Ccdc141 coiled-coil domain containing 141 involved_in ISO (PMID:34298015) RGD PMID:34298015 NCBI chr 3:61,948,614...62,109,968 JBrowse link
G Ccdc39 coiled-coil domain 39 molecular ruler complex subunit acts_upstream_of_or_within ISO MGI:4364215|MGI:5056368 (PMID:29317443), (PMID:34992132) RGD PMID:29317443 PMID:34992132 NCBI chr 2:116,665,651...116,703,354 JBrowse link
G Cdk5r1 cyclin-dependent kinase 5 regulatory subunit 1 involved_in ISS
ISO
IBA
GO_REF:0000024
(PMID:10545161)
GO_REF:0000033
UniProt
RGD
GO_Central
PMID:10545161 GO_REF:0000024 GO_REF:0000033 NCBI chr10:65,981,692...65,985,831 JBrowse link
G Cdk5r2 cyclin-dependent kinase 5 regulatory subunit 2 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr 9:76,416,251...76,417,719 JBrowse link
G Cdk5rap2 CDK5 regulatory subunit associated protein 2 involved_in IEA
ISO
ISS
GO_REF:0000107
(PMID:20460369)
GO_REF:0000024
Ensembl
RGD
UniProt
PMID:20460369 GO_REF:0000024 GO_REF:0000107 NCBI chr 5:83,792,282...83,961,129 JBrowse link
G Cers1 ceramide synthase 1 acts_upstream_of_or_within ISO MGI:2653507 (PMID:15248193) RGD PMID:15248193 NCBI chr16:19,131,271...19,146,480 JBrowse link
G Cfap43 cilia and flagella associated protein 43 acts_upstream_of_or_within ISO (PMID:31004071) RGD PMID:31004071 NCBI chr 1:246,625,259...246,712,438 JBrowse link
G Chd8 chromodomain helicase DNA binding protein 8 involved_in
acts_upstream_of_or_within
ISO
IBA
IEA
(PMID:24998929)
MGI:3530648 (PMID:27602517)
GO_REF:0000033
GO_REF:0000107
RGD
GO_Central
Ensembl
PMID:24998929 PMID:27602517 GO_REF:0000033 GO_REF:0000107 NCBI chr15:24,905,789...24,965,461 JBrowse link
G Cic capicua transcriptional repressor involved_in ISO (PMID:28288114) RGD PMID:28288114 NCBI chr 1:80,853,920...80,880,537 JBrowse link
G Cited1 Cbp/p300-interacting transactivator with Glu/Asp-rich carboxy-terminal domain 1 involved_in ISO (PMID:17047318) RGD PMID:17047318 NCBI chr  X:67,350,376...67,355,072 JBrowse link
G Cln5 CLN5, intracellular trafficking protein involved_in ISO (PMID:10992246) RGD PMID:10992246 NCBI chr15:79,893,573...79,903,438 JBrowse link
G Cntn4 contactin 4 involved_in IEP PMID:8586965 UniProt PMID:8586965 RGD:631992 NCBI chr 4:138,624,584...139,622,499 JBrowse link
G Col4a1 collagen type IV alpha 1 chain involved_in ISO (PMID:16107487) RGD PMID:16107487 NCBI chr16:84,885,597...84,996,482 JBrowse link
G Ctns cystinosin, lysosomal cystine transporter involved_in ISO (PMID:17471495) RGD PMID:17471495 NCBI chr10:58,300,069...58,315,725 JBrowse link
G Cwh43 cell wall biogenesis 43 C-terminal homolog acts_upstream_of_or_within ISO (PMID:33459505) RGD PMID:33459505 NCBI chr14:34,754,279...34,800,530 JBrowse link
G Cx3cr1 C-X3-C motif chemokine receptor 1 involved_in ISS
ISO
GO_REF:0000024
(PMID:21778362)
UniProt
RGD
PMID:21778362 GO_REF:0000024 NCBI chr 8:128,661,294...128,679,048 JBrowse link
G Cxcl12 C-X-C motif chemokine ligand 12 acts_upstream_of_or_within ISO (PMID:12183377) RGD PMID:12183377 NCBI chr 4:152,060,781...152,073,628 JBrowse link
G Cxcr4 C-X-C motif chemokine receptor 4 involved_in
acts_upstream_of_or_within
IBA
ISO
GO_REF:0000033
MGI:1934407 (PMID:12183377)
GO_Central
RGD
PMID:12183377 GO_REF:0000033 NCBI chr13:42,630,383...42,634,288 JBrowse link
G Dclk1 doublecortin-like kinase 1 acts_upstream_of_or_within ISO MGI:1277171 (PMID:16387638) RGD PMID:16387638 NCBI chr 2:141,567,215...141,861,088 JBrowse link
G Dcx doublecortin acts_upstream_of_or_within ISO MGI:1330861 (PMID:16387638) RGD PMID:16387638 NCBI chr  X:107,430,767...107,573,612 JBrowse link
G Ddit4 DNA-damage-inducible transcript 4 involved_in IMP PMID:21368030 UniProt PMID:21368030 RGD:8554300 NCBI chr20:28,434,938...28,437,037 JBrowse link
G Dhx37 DEAH-box helicase 37 involved_in ISO (PMID:31256877) RGD PMID:31256877 NCBI chr12:31,194,782...31,214,890 JBrowse link
G Diaph1 diaphanous-related formin 1 involved_in ISO (PMID:24781755) RGD PMID:24781755 NCBI chr18:29,669,659...29,769,070 JBrowse link
G Dmbx1 diencephalon/mesencephalon homeobox 1 involved_in ISO (PMID:15314164) RGD PMID:15314164 NCBI chr 5:129,394,221...129,403,040 JBrowse link
G Dmxl2 Dmx-like 2 acts_upstream_of_or_within ISO MGI:4432280 (PMID:29078390) RGD PMID:29078390 NCBI chr 8:54,741,164...54,884,948 JBrowse link
G Dnajc30 DnaJ heat shock protein family (Hsp40) member C30 involved_in ISO (PMID:30318146) RGD PMID:30318146 NCBI chr12:21,628,319...21,629,398 JBrowse link
G Dscaml1 DS cell adhesion molecule-like 1 involved_in ISO (PMID:12051741) RGD PMID:12051741 NCBI chr 8:54,637,054...54,954,042 JBrowse link
G Eml1 EMAP like 1 involved_in ISS
ISO
IEA
GO_REF:0000024
(PMID:24859200)
GO_REF:0000107
UniProt
RGD
Ensembl
PMID:24859200 GO_REF:0000024 GO_REF:0000107 NCBI chr 6:127,283,968...127,457,246 JBrowse link
G Emx1 empty spiracles homeobox 1 acts_upstream_of_or_within
involved_in
ISO
IBA
MGI:1857433|MGI:2136349 (PMID:12091317), (PMID:12561075)
GO_REF:0000033
RGD
GO_Central
PMID:12091317 PMID:12561075 GO_REF:0000033 NCBI chr 4:117,725,148...117,741,616 JBrowse link
G Emx2 empty spiracles homeobox 2 acts_upstream_of_or_within
involved_in
ISO
IBA
MGI:2136350|MGI:2148858 (PMID:12091317), (PMID:12196586), (PMID:12209834), (PMID:12561075)
GO_REF:0000033
RGD
GO_Central
PMID:12091317 PMID:12196586 PMID:12209834 PMID:12561075 GO_REF:0000033 NCBI chr 1:258,626,584...258,633,594 JBrowse link
G Eomes eomesodermin involved_in ISO (PMID:17353897) RGD PMID:17353897 NCBI chr 8:127,059,215...127,067,070 JBrowse link
G Epha7 Eph receptor A7 involved_in IEP
ISO
IEA
ISS
(PMID:15902206)
GO_REF:0000107
GO_REF:0000024
RGD
Ensembl
UniProt
PMID:15902206 PMID:7731712 GO_REF:0000024 GO_REF:0000107, RGD:70732 NCBI chr 5:47,771,776...47,925,189 JBrowse link
G Epor erythropoietin receptor acts_upstream_of_or_within
involved_in
ISO
IEA
MGI:1857575 (PMID:11807041)
GO_REF:0000107
RGD
Ensembl
PMID:11807041 GO_REF:0000107 NCBI chr 8:28,765,738...28,770,371 JBrowse link
G Esr2 estrogen receptor 2 acts_upstream_of_or_within ISO MGI:2152217 (PMID:12515851) RGD PMID:12515851 NCBI chr 6:100,589,553...100,645,240 JBrowse link
G Ext1 exostosin glycosyltransferase 1 acts_upstream_of_or_within_positive_effect ISO (PMID:14605369)
MGI:2176173|MGI:2682061 (PMID:14605369)
RGD PMID:14605369 NCBI chr 7:86,265,651...86,544,488 JBrowse link
G Fgfr1 Fibroblast growth factor receptor 1 acts_upstream_of_or_within ISO MGI:2448986 (PMID:12682014) RGD PMID:12682014 NCBI chr16:73,194,631...73,249,855 JBrowse link
G Fkrp fukutin related protein acts_upstream_of_or_within ISO MGI:4834518|MGI:4835411 (PMID:20675713), (PMID:23591631), (PMID:26306834) RGD PMID:20675713 PMID:23591631 PMID:26306834 NCBI chr 1:77,479,641...77,486,954 JBrowse link
G Fktn fukutin acts_upstream_of_or_within ISO (PMID:29360985) RGD PMID:29360985 NCBI chr 5:68,339,803...68,396,412 JBrowse link
G Flvcr2 FLVCR choline and putative heme transporter 2 acts_upstream_of_or_within ISO (PMID:32369453) RGD PMID:32369453 NCBI chr 6:105,408,355...105,472,355 JBrowse link
G Foxc1 forkhead box C1 acts_upstream_of_or_within ISO MGI:1856705|MGI:1857869 (PMID:4784576), (PMID:5500588), (PMID:9635428) RGD PMID:4784576 PMID:5500588 PMID:9635428 NCBI chr17:32,631,379...32,635,361 JBrowse link
G Foxj1 forkhead box J1 involved_in IEA
ISO
GO_REF:0000107
(PMID:9096351)
Ensembl
RGD
PMID:9096351 GO_REF:0000107 NCBI chr10:101,566,299...101,570,370 JBrowse link
G Foxr1 forkhead box R1 involved_in ISO (PMID:34723967) RGD PMID:34723967 NCBI chr 8:53,657,388...53,669,424 JBrowse link
G Gabrb3 gamma-aminobutyric acid type A receptor subunit beta 3 acts_upstream_of_or_within ISO (PMID:16168624) RGD PMID:16168624 NCBI chr 1:117,602,772...117,838,230 JBrowse link
G Gas8 growth arrest specific 8 acts_upstream_of_or_within ISO MGI:3870680|MGI:5803867 (PMID:27472056) RGD PMID:27472056 NCBI chr19:51,552,770...51,572,323 JBrowse link
G Git1 GIT ArfGAP 1 involved_in IEA
ISO
IBA
GO_REF:0000002
(PMID:25792865)
GO_REF:0000033
GO_REF:0000107
InterPro
RGD
GO_Central
Ensembl
PMID:25792865 GO_REF:0000002 GO_REF:0000033 GO_REF:0000107 NCBI chr10:62,342,082...62,356,379 JBrowse link
G Git2 GIT ArfGAP 2 involved_in IEA
IBA
GO_REF:0000002
GO_REF:0000033
InterPro
GO_Central
GO_REF:0000002 GO_REF:0000033 NCBI chr12:41,829,717...41,872,621 JBrowse link
G Gli3 GLI family zinc finger 3 acts_upstream_of_or_within ISO MGI:1856276|MGI:1856282 (PMID:12435361), (PMID:17395647), (PMID:8026071) RGD PMID:8026071 PMID:12435361 PMID:17395647 NCBI chr17:54,134,064...54,405,198 JBrowse link
G Gpr158 G protein-coupled receptor 158 involved_in IEA
ISO
GO_REF:0000107
(PMID:28851741)
Ensembl
RGD
PMID:28851741 GO_REF:0000107 NCBI chr17:83,777,625...84,244,428 JBrowse link
G Grhl2 grainyhead-like transcription factor 2 involved_in
acts_upstream_of_or_within
IBA
ISO
GO_REF:0000033
MGI:4942413 (PMID:21377456)
GO_Central
RGD
PMID:21377456 GO_REF:0000033 NCBI chr 7:68,400,287...68,530,269 JBrowse link
G Gsx1 GS homeobox 1 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr12:7,880,663...7,882,947 JBrowse link
G Gsx2 GS homeobox 2 acts_upstream_of_or_within ISO MGI:108067 (PMID:12930780) RGD PMID:12930780 NCBI chr14:33,123,799...33,126,151 JBrowse link
G Herc1 HECT and RLD domain containing E3 ubiquitin protein ligase family member 1 acts_upstream_of_or_within ISO MGI:6102914 (PMID:29078390) RGD PMID:29078390 NCBI chr 8:75,796,347...75,965,347 JBrowse link
G Hes5 hes family bHLH transcription factor 5 involved_in ISS
ISO
GO_REF:0000024
(PMID:17331197)
UniProt
RGD
PMID:17331197 GO_REF:0000024 NCBI chr 5:170,804,511...170,807,988 JBrowse link
G Hesx1 HESX homeobox 1 acts_upstream_of_or_within ISO MGI:1931124 (PMID:11291863) RGD PMID:11291863 NCBI chr16:2,191,852...2,193,957 JBrowse link
G Hmx2 H6 family homeobox 2 acts_upstream_of_or_within ISO MGI:107160 (PMID:15363417) RGD PMID:15363417 NCBI chr 1:186,319,110...186,326,771 JBrowse link
G Hmx3 H6 family homeobox 3 acts_upstream_of_or_within ISO MGI:107159 (PMID:15363417) RGD PMID:15363417 NCBI chr 1:186,313,237...186,315,201 JBrowse link
G Hsd17b7 hydroxysteroid (17-beta) dehydrogenase 7 involved_in ISO (PMID:18669642) RGD PMID:18669642 NCBI chr13:82,170,079...82,190,018 JBrowse link
G Hspg2 heparan sulfate proteoglycan 2 acts_upstream_of_or_within ISO MGI:1934892 (PMID:10579729) RGD PMID:10579729 NCBI chr 5:154,960,818...155,061,971 JBrowse link
G Htt huntingtin acts_upstream_of_or_within ISO MGI:2675580 (PMID:16978870) RGD PMID:16978870 NCBI chr14:75,845,836...75,996,094 JBrowse link
G Hydin Hydin, axonemal central pair apparatus protein acts_upstream_of_or_within ISO MGI:1856913|MGI:3801608 (PMID:26234751) RGD PMID:26234751 MGI:71926 NCBI chr19:38,236,996...38,583,271 JBrowse link
G Id4 inhibitor of DNA binding 4 acts_upstream_of_or_within ISO MGI:3505549 (PMID:15469968) RGD PMID:15469968 NCBI chr17:16,389,387...16,391,956 JBrowse link
G Ier3ip1 immediate early response 3 interacting protein 1 involved_in ISS GO_REF:0000024 UniProt GO_REF:0000024 NCBI chr18:70,474,978...70,486,062 JBrowse link
G Ier3ip1-ps1 immediate early response 3 interacting protein 1, pseudogene 1 involved_in ISO (PMID:33122427) RGD PMID:33122427 NCBI chr 4:132,342,131...132,342,625 JBrowse link
G Ift172 intraflagellar transport 172 involved_in
acts_upstream_of_or_within
IEA
ISO
GO_REF:0000107
MGI:3829198 (PMID:18930042)
Ensembl
RGD
PMID:18930042 GO_REF:0000107 NCBI chr 6:30,801,841...30,841,239 JBrowse link
G Ift88 intraflagellar transport 88 acts_upstream_of_or_within ISO MGI:1918742|MGI:3823090 (PMID:19036983), (PMID:22228099) RGD PMID:19036983 PMID:22228099 NCBI chr15:31,573,325...31,666,068 JBrowse link
G Igf1r insulin-like growth factor 1 receptor acts_upstream_of_or_within ISO MGI:1926486 (PMID:12904469) RGD PMID:12904469 NCBI chr 1:130,959,787...131,248,664 JBrowse link
G Immp2l inner mitochondrial membrane peptidase subunit 2 acts_upstream_of_or_within ISO MGI:3765965 (PMID:21824519) RGD PMID:21824519 NCBI chr 6:58,070,035...58,970,165 JBrowse link
G Irs2 insulin receptor substrate 2 acts_upstream_of_or_within ISO MGI:2158686 (PMID:12904469) RGD PMID:12904469 NCBI chr16:85,190,310...85,214,543 JBrowse link
G Jhy junctional cadherin complex regulator involved_in
acts_upstream_of_or_within
IBA
ISO
GO_REF:0000033
MGI:5437647 (PMID:23906841)
GO_Central
RGD
PMID:23906841 GO_REF:0000033 NCBI chr 8:41,276,501...41,333,383 JBrowse link
G Kcna1 potassium voltage-gated channel subfamily A member 1 involved_in ISO (PMID:21966978) RGD PMID:21966978 NCBI chr 4:161,150,378...161,160,051 JBrowse link
G Kcnq2 potassium voltage-gated channel subfamily Q member 2 acts_upstream_of_or_within ISO (PMID:30382937) RGD PMID:30382937 NCBI chr 3:168,194,776...168,253,831 JBrowse link
G Kdm4b lysine demethylase 4B involved_in ISO (PMID:27023172) RGD PMID:27023172 NCBI chr 9:1,158,737...1,237,233 JBrowse link
G Kif21b kinesin family member 21B acts_upstream_of_or_within ISO MGI:4364527 (PMID:29078390) RGD PMID:29078390 NCBI chr13:47,576,129...47,626,112 JBrowse link
G Large1 LARGE xylosyl- and glucuronyltransferase 1 acts_upstream_of_or_within ISO MGI:1856965 (PMID:26306834), (PMID:29360985) RGD PMID:26306834 PMID:29360985 NCBI chr19:11,603,129...12,048,930 JBrowse link
G Lhx2 LIM homeobox 2 acts_upstream_of_or_within ISO MGI:1890208 (PMID:14566948), (PMID:15295034) RGD PMID:14566948 PMID:15295034 NCBI chr 3:22,113,619...22,143,909 JBrowse link
G Maco1 macoilin 1 involved_in ISO (PMID:15255972) RGD PMID:15255972 NCBI chr 5:147,012,416...147,075,265 JBrowse link
G Macrod2 mono-ADP ribosylhydrolase 2 involved_in ISO (PMID:17586838) RGD PMID:17586838 NCBI chr 3:127,720,066...129,737,511 JBrowse link
G Macroh2a2 macroH2A.2 histone involved_in ISO (PMID:19734898) RGD PMID:19734898 NCBI chr20:29,678,194...29,727,867 JBrowse link
G Map1s microtubule-associated protein 1S involved_in IEA
ISO
GO_REF:0000107
(PMID:15528209)
Ensembl
RGD
PMID:15528209 GO_REF:0000107 NCBI chr16:18,516,759...18,527,777 JBrowse link
G MAST1 microtubule associated serine/threonine kinase 1 involved_in ISO
IBA
IEA
(PMID:30449657)
GO_REF:0000033
GO_REF:0000107
RGD
GO_Central
Ensembl
PMID:30449657 GO_REF:0000033 GO_REF:0000107 NCBI chr19:40,121,271...40,149,073 JBrowse link
G Matcap1 microtubule associated tyrosine carboxypeptidase 1 involved_in ISS
ISO
IEA
GO_REF:0000024
(PMID:35482892)
GO_REF:0000107
UniProt
RGD
Ensembl
PMID:35482892 GO_REF:0000024 GO_REF:0000107 NCBI chr19:33,158,053...33,166,784 JBrowse link
G Mdga1 MAM domain containing glycosylphosphatidylinositol anchor 1 involved_in IEP PMID:15019943 HGNC-UCL PMID:15019943 RGD:8554528 NCBI chr20:7,900,327...7,964,309 JBrowse link
G Mecp2 methyl CpG binding protein 2 acts_upstream_of_or_within ISO MGI:2158354 (PMID:18571096) RGD PMID:18571096 NCBI chr  X:156,932,481...156,995,981 JBrowse link
G Med1 mediator complex subunit 1 acts_upstream_of_or_within ISO MGI:1861125 (PMID:10882104) RGD PMID:10882104 NCBI chr10:83,641,851...83,685,560 JBrowse link
G Meis1 Meis homeobox 1 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr14:93,155,426...93,294,373 JBrowse link
G Meis2 Meis homeobox 2 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr 3:102,742,904...102,944,833 JBrowse link
G Meis3 Meis homeobox 3 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr 1:76,861,267...76,872,691 JBrowse link
G Met MET proto-oncogene, receptor tyrosine kinase acts_upstream_of_or_within ISO MGI:2450967 (PMID:12397180) RGD PMID:12397180 NCBI chr 4:46,756,823...46,864,041 JBrowse link
G Mfsd2a MFSD2 lysolipid transporter A, lysophospholipid acts_upstream_of_or_within ISO (PMID:26005865), (PMID:26005868)
(PMID:30074985)
RGD PMID:26005865 PMID:26005868 PMID:30074985 NCBI chr 5:140,510,933...140,525,828 JBrowse link
G Mink1 misshapen-like kinase 1 involved_in ISO (PMID:10708748) RGD PMID:10708748 NCBI chr10:55,776,879...55,829,406 JBrowse link
G Myh10 myosin heavy chain 10 acts_upstream_of_or_within ISO MGI:3664764|MGI:3664765 (PMID:16481398) RGD PMID:16481398 NCBI chr10:53,393,901...53,525,174 JBrowse link
G Napa NSF attachment protein alpha involved_in
acts_upstream_of_or_within
IEA
ISO
GO_REF:0000107
MGI:1856610 (PMID:11706940)
Ensembl
RGD
PMID:11706940 GO_REF:0000107 NCBI chr 1:76,787,036...76,805,869 JBrowse link
G Ncoa6 nuclear receptor coactivator 6 acts_upstream_of_or_within ISO MGI:2450859 (PMID:12556486) RGD PMID:12556486 NCBI chr 3:143,890,896...143,961,916 JBrowse link
G Ndufs4 NADH:ubiquinone oxidoreductase subunit S4 involved_in
acts_upstream_of_or_within
ISO
IEA
(PMID:14765537)
MGI:3793713 (PMID:28916769)
GO_REF:0000107
RGD
Ensembl
PMID:14765537 PMID:28916769 GO_REF:0000107 NCBI chr 2:47,684,420...47,794,914 JBrowse link
G Negr1 neuronal growth regulator 1 acts_upstream_of_or_within
involved_in
ISO
IEA
MGI:5447397 (PMID:30932003)
GO_REF:0000107
RGD
Ensembl
PMID:30932003 GO_REF:0000107 NCBI chr 2:245,624,460...246,359,605 JBrowse link
G Nes nestin involved_in ISS GO_REF:0000024 UniProt GO_REF:0000024 NCBI chr 2:175,735,715...175,745,631 JBrowse link
G Nf1 neurofibromin 1 involved_in
acts_upstream_of_or_within
ISS
ISO
GO_REF:0000024
MGI:1857478 (PMID:10419687)
HGNC-UCL
RGD
PMID:10419687 GO_REF:0000024 NCBI chr10:64,803,986...65,037,086 JBrowse link
G Nf2 NF2, moesin-ezrin-radixin like (MERLIN) tumor suppressor acts_upstream_of_or_within ISO (PMID:23863479) RGD PMID:23863479 NCBI chr14:79,627,399...79,710,709 JBrowse link
G Nfib nuclear factor I/B involved_in ISO (PMID:30388402) RGD PMID:30388402 NCBI chr 5:101,805,168...102,020,618 JBrowse link
G Nfix nuclear factor I X involved_in ISO MGI:3714028|MGI:3802571 (PMID:17353270), (PMID:18477394), (PMID:23964093) RGD PMID:17353270 PMID:18477394 PMID:23964093 NCBI chr19:23,355,388...23,450,360 JBrowse link
G Nipbl NIPBL, cohesin loading factor involved_in ISO
IBA
(PMID:8291537)
GO_REF:0000033
RGD
GO_Central
PMID:8291537 GO_REF:0000033 NCBI chr 2:57,399,443...57,586,770 JBrowse link
G Nkx2-1 NK2 homeobox 1 involved_in
acts_upstream_of_or_within
ISO (PMID:11971878)
MGI:1857494|MGI:95843 (PMID:12930780), (PMID:8557195)
RGD PMID:8557195 PMID:11971878 PMID:12930780 NCBI chr 6:73,996,601...74,001,483 JBrowse link
G Nme7 NME/NM23 family member 7 acts_upstream_of_or_within
involved_in
ISO
IEA
MGI:4151115 (PMID:21746835)
GO_REF:0000107
RGD
Ensembl
PMID:21746835 GO_REF:0000107 NCBI chr13:79,190,462...79,319,890 JBrowse link
G Nnat neuronatin involved_in IEA GO_REF:0000002 InterPro GO_REF:0000002 NCBI chr 3:146,225,941...146,228,868 JBrowse link
G Nodal nodal growth differentiation factor acts_upstream_of_or_within ISO MGI:2158732 (PMID:11311163) RGD PMID:11311163 NCBI chr20:29,368,436...29,376,837 JBrowse link
G Nog noggin acts_upstream_of_or_within ISO MGI:1862000 (PMID:12397106) RGD PMID:12397106 NCBI chr10:74,625,874...74,627,501 JBrowse link
G Notch2 notch receptor 2 IEP RGD PMID:1295745 RGD:69906 NCBI chr 2:185,610,594...185,744,088 JBrowse link
G Noto notochord homeobox involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr 4:117,961,163...117,965,402 JBrowse link
G Nr2e1 nuclear receptor subfamily 2, group E, member 1 acts_upstream_of_or_within ISO MGI:2176490 (PMID:14994267) RGD PMID:14994267 NCBI chr20:46,050,134...46,071,257 JBrowse link
G Nrg1 neuregulin 1 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr16:65,954,084...67,007,484 JBrowse link
G Ntf3 neurotrophin 3 acts_upstream_of_or_within ISO MGI:1861706 (PMID:10195193) RGD PMID:10195193 NCBI chr 4:158,914,984...158,984,453 JBrowse link
G Odad3 outer dynein arm docking complex subunit 3 acts_upstream_of_or_within ISO MGI:5548687 (PMID:31383820) RGD PMID:31383820 NCBI chr 8:20,520,898...20,534,499 JBrowse link
G Odad4 outer dynein arm docking complex subunit 4 acts_upstream_of
acts_upstream_of_or_within
ISO MGI:6110171 (PMID:27486780) RGD PMID:27486780 NCBI chr10:85,480,089...85,508,603 JBrowse link
G Pax4 paired box 4 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr 4:58,023,873...58,032,265 JBrowse link
G Pax6 paired box 6 acts_upstream_of_or_within
involved_in
ISO
IBA
MGI:1856155 (PMID:10409504), (PMID:12196586)
GO_REF:0000033
RGD
GO_Central
PMID:10409504 PMID:12196586 GO_REF:0000033 NCBI chr 3:92,128,772...92,157,022 JBrowse link
G Pbx2 PBX homeobox 2 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr20:4,156,107...4,161,503 JBrowse link
G Pbx3 PBX homeobox 3 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr 3:17,488,691...17,682,412 JBrowse link
G Pbx4 PBX homeobox 4 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr16:19,555,089...19,590,054 JBrowse link
G Pcdh18 protocadherin 18 involved_in ISO (PMID:11716507) RGD PMID:11716507 NCBI chr 2:133,831,996...133,845,992 JBrowse link
G Plxnb2 plexin B2 involved_in ISO (PMID:17554007) RGD PMID:17554007 NCBI chr 7:120,232,276...120,258,385 JBrowse link
G Pomgnt1 protein O-linked mannose N-acetylglucosaminyltransferase 1 (beta 1,2-) acts_upstream_of_or_within ISO MGI:5052171 (PMID:26306834) RGD PMID:26306834 NCBI chr 5:129,634,274...129,644,150 JBrowse link
G Pomk protein-O-mannose kinase acts_upstream_of_or_within ISO MGI:4247868 (PMID:21746835) RGD PMID:21746835 NCBI chr16:72,788,842...72,801,122 JBrowse link
G Ppt1 palmitoyl-protein thioesterase 1 involved_in ISS
ISO
PMID:8895569
(PMID:7637805)
RGD PMID:7637805 PMID:8895569 RGD:8553248 NCBI chr 5:135,121,164...135,142,048 JBrowse link
G Prkdc protein kinase, DNA-activated, catalytic subunit acts_upstream_of_or_within ISO MGI:107202 (PMID:16687486) RGD PMID:16687486 NCBI chr11:98,544,952...98,762,499 JBrowse link
G Prox1 prospero homeobox 1 involved_in ISO (PMID:8812486) RGD PMID:8812486 NCBI chr13:104,196,615...104,251,007 JBrowse link
G Psen1 presenilin 1 acts_upstream_of_or_within ISO MGI:1930934 (PMID:9153393) RGD PMID:9153393 NCBI chr 6:109,054,160...109,106,191 JBrowse link
G Ptch1 patched 1 involved_in ISO (PMID:11517919) RGD PMID:11517919 NCBI chr17:1,548,449...1,613,461 JBrowse link
G Ptpn11 protein tyrosine phosphatase, non-receptor type 11 involved_in ISO (PMID:11704759) RGD PMID:11704759 NCBI chr12:41,026,079...41,085,577 JBrowse link
G Pygo2 pygopus family PHD finger 2 acts_upstream_of_or_within ISO MGI:3712856 (PMID:17425782) RGD PMID:17425782 NCBI chr 2:174,849,670...174,854,758 JBrowse link
G Qars1 glutaminyl-tRNA synthetase 1 involved_in ISO
IEA
(PMID:24656866)
GO_REF:0000107
RGD
Ensembl
PMID:24656866 GO_REF:0000107 NCBI chr 8:109,207,705...109,215,738 JBrowse link
G Rab18 RAB18, member RAS oncogene family involved_in ISS GO_REF:0000024 UniProt GO_REF:0000024 NCBI chr17:54,944,099...54,976,093 JBrowse link
G Rab3gap1 RAB3 GTPase activating protein catalytic subunit 1 involved_in ISO
IBA
(PMID:20512159)
GO_REF:0000033
RGD
GO_Central
PMID:20512159 GO_REF:0000033 NCBI chr13:39,355,698...39,429,154 JBrowse link
G Rax retina and anterior neural fold homeobox acts_upstream_of_or_within ISO MGI:2152531 (PMID:15789424) RGD PMID:15789424 NCBI chr18:59,463,347...59,467,469 JBrowse link
G Reln reelin involved_in
acts_upstream_of_or_within
ISS
ISO
GO_REF:0000024
MGI:1856398 (PMID:12223565)
UniProt
RGD
PMID:12223565 GO_REF:0000024 NCBI chr 4:12,736,177...13,162,956 JBrowse link
G Robo2 roundabout guidance receptor 2 involved_in ISO (PMID:10197527) RGD PMID:10197527 NCBI chr11:26,015,919...27,583,750 JBrowse link
G Rogdi rogdi atypical leucine zipper involved_in
acts_upstream_of_or_within
ISO (PMID:25565929)
(PMID:38172607)
RGD PMID:25565929 PMID:38172607 NCBI chr10:10,567,834...10,572,453 JBrowse link
G Rpgrip1l Rpgrip1-like acts_upstream_of_or_within ISO MGI:3716208 (PMID:17553904), (PMID:17558409) RGD PMID:17553904 PMID:17558409 NCBI chr19:31,865,050...31,957,930 JBrowse link
G Rtn1 reticulon 1 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr 6:96,499,137...96,719,340 JBrowse link
G Rtn2 reticulon 2 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr 1:78,935,056...78,948,069 JBrowse link
G Rtn3 reticulon 3 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr 1:204,612,675...204,669,212 JBrowse link
G Rtn4 reticulon 4 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr14:103,450,074...103,497,687 JBrowse link
G S1pr1 sphingosine-1-phosphate receptor 1 acts_upstream_of_or_within ISO MGI:2158346 (PMID:16314531) RGD PMID:16314531 NCBI chr 2:206,309,715...206,314,070 JBrowse link
G Sct secretin involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr 1:196,382,857...196,383,668 JBrowse link
G Scyl2 SCY1 like pseudokinase 2 involved_in ISO (PMID:26203146) RGD PMID:26203146 NCBI chr 7:25,951,734...26,004,663 JBrowse link
G Selenop selenoprotein P involved_in
acts_upstream_of_or_within
IEA
ISO
GO_REF:0000107
MGI:2656912 (PMID:14704310)
Ensembl
RGD
PMID:14704310 GO_REF:0000107 NCBI chr 2:52,498,123...52,508,409 JBrowse link
G Septin4 septin 4 acts_upstream_of_or_within ISO MGI:3574373 (PMID:16314519) RGD PMID:16314519 NCBI chr10:72,863,969...72,888,018 JBrowse link
G Setd1a SET domain containing 1A, histone lysine methyltransferase involved_in ISO (PMID:31197650) RGD PMID:31197650 NCBI chr 1:191,818,752...191,842,167 JBrowse link
G Shroom4 shroom family member 4 involved_in ISO (PMID:16249884) RGD PMID:16249884 NCBI chr  X:15,869,065...16,076,850 JBrowse link
G Six3 SIX homeobox 3 involved_in
acts_upstream_of_or_within
IBA
ISO
GO_REF:0000033
MGI:2450901 (PMID:12569128)
GO_Central
RGD
PMID:12569128 GO_REF:0000033 NCBI chr 6:9,039,017...9,043,336 JBrowse link
G Slc1a1 solute carrier family 1 member 1 involved_in ISO (PMID:28886095) RGD PMID:28886095 NCBI chr 1:226,549,932...226,631,925 JBrowse link
G Slc23a1 solute carrier family 23 member 1 involved_in ISS
ISO
IEA
GO_REF:0000024
(PMID:11984597)
GO_REF:0000107
UniProt
RGD
Ensembl
PMID:11984597 GO_REF:0000024 GO_REF:0000107 NCBI chr18:27,214,940...27,230,564 JBrowse link
G Slc6a17 solute carrier family 6 member 17 involved_in ISS
ISO
GO_REF:0000024
(PMID:25704603)
UniProt
RGD
PMID:25704603 GO_REF:0000024 NCBI chr 2:195,107,434...195,155,697 JBrowse link
G Slc7a11 solute carrier family 7 member 11 acts_upstream_of_or_within ISO MGI:1857061 (PMID:17035536) RGD PMID:17035536 NCBI chr 2:136,532,912...136,668,560 JBrowse link
G Smarca1 SNF2 related chromatin remodeling ATPase 1 involved_in
acts_upstream_of_or_within
ISO (PMID:14609955)
MGI:5427348 (PMID:22516202)
RGD PMID:14609955 PMID:22516202 NCBI chr  X:131,858,148...131,944,639 JBrowse link
G Smg9 SMG9 nonsense mediated mRNA decay factor involved_in ISS
ISO
IEA
GO_REF:0000024
(PMID:27018474)
GO_REF:0000107
UniProt
RGD
Ensembl
PMID:27018474 GO_REF:0000024 GO_REF:0000107 NCBI chr 1:79,988,540...80,011,262 JBrowse link
G Sox1 SRY-box transcription factor 1 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr16:83,837,689...83,841,703 JBrowse link
G Sox11 SRY-box transcription factor 11 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr 6:44,008,333...44,010,354 JBrowse link
G Sox12 SRY-box transcription factor 12 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr 3:140,859,499...140,860,518 JBrowse link
G Sox14 SRY-box transcription factor 14 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr 8:100,421,982...100,423,918 JBrowse link
G Sox15 SRY-box transcription factor 15 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr10:54,871,793...54,873,497 JBrowse link
G Sox2 SRY-box transcription factor 2 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr 2:117,536,929...117,539,340 JBrowse link
G Sox21 SRY-box transcription factor 21 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr15:95,292,429...95,296,024 JBrowse link
G Sox3 SRY-box transcription factor 3 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr  X:139,308,608...139,310,687 JBrowse link
G Sox4 SRY-box transcription factor 4 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr17:35,876,298...35,881,004 JBrowse link
G Sox6 SRY-box transcription factor 6 involved_in ISS
IEA
ISO
GO_REF:0000024
GO_REF:0000107
(PMID:32442410)
UniProt
Ensembl
RGD
PMID:32442410 GO_REF:0000024 GO_REF:0000107 NCBI chr 1:169,723,306...170,334,846 JBrowse link
G Sphk1 sphingosine kinase 1 acts_upstream_of_or_within ISO MGI:1861380 (PMID:16314531) RGD PMID:16314531 NCBI chr10:102,257,413...102,263,086 JBrowse link
G Sphk2 sphingosine kinase 2 acts_upstream_of_or_within ISO MGI:1316649 (PMID:16314531) RGD PMID:16314531 NCBI chr 1:105,317,332...105,324,985 JBrowse link
G Stk36 serine/threonine kinase 36 acts_upstream_of_or_within ISO MGI:5429196 (PMID:21746835) RGD PMID:21746835 NCBI chr 9:83,625,905...83,652,785 JBrowse link
G Stxbp3 syntaxin binding protein 3 acts_upstream_of_or_within ISO MGI:3528591 (PMID:15690082) RGD PMID:15690082 NCBI chr 2:199,130,725...199,173,823 JBrowse link
G Svbp small vasohibin binding protein involved_in ISO (PMID:31363758), (PMID:35482892) RGD PMID:31363758 PMID:35482892 NCBI chr 5:132,808,021...132,813,735 JBrowse link
G Tbc1d23 TBC1 domain family, member 23 involved_in ISO (PMID:28823706), (PMID:28823707) RGD PMID:28823706 PMID:28823707 NCBI chr11:43,303,355...43,361,507 JBrowse link
G Tgfbr2 transforming growth factor, beta receptor 2 involved_in IEA
ISO
GO_REF:0000107
(PMID:12975342)
Ensembl
RGD
PMID:12975342 GO_REF:0000107 NCBI chr 8:124,672,677...124,761,741 JBrowse link
G Tmx2 thioredoxin-related transmembrane protein 2 involved_in ISS
IBA
ISO
GO_REF:0000024
GO_REF:0000033
(PMID:31735293)
UniProt
GO_Central
RGD
PMID:31735293 GO_REF:0000024 GO_REF:0000033 NCBI chr 3:90,161,628...90,169,278 JBrowse link
G Tubgcp2 tubulin gamma complex component 2 involved_in ISO (PMID:31630790) RGD PMID:31630790 NCBI chr 1:194,791,113...194,817,807 JBrowse link
G Tulp3 TUB like protein 3 acts_upstream_of_or_within ISO MGI:2388066 (PMID:11406614), (PMID:19286674) RGD PMID:11406614 PMID:19286674 NCBI chr 4:161,590,478...161,632,244 JBrowse link
G Ufc1 ubiquitin-fold modifier conjugating enzyme 1 involved_in ISS
ISO
GO_REF:0000024
(PMID:29868776)
UniProt
RGD
PMID:29868776 GO_REF:0000024 NCBI chr13:83,709,329...83,719,762 JBrowse link
G Ufm1 ubiquitin-fold modifier 1 involved_in ISS
ISO
GO_REF:0000024
(PMID:29868776)
UniProt
RGD
PMID:29868776 GO_REF:0000024 NCBI chr 2:137,969,476...137,977,620 JBrowse link
G Ugp2 UDP-glucose pyrophosphorylase 2 involved_in ISO (PMID:31820119) RGD PMID:31820119 NCBI chr14:95,456,330...95,497,483 JBrowse link
G Ulk4 unc-51 like kinase 4 acts_upstream_of_or_within ISO MGI:4362969 (PMID:27445138) RGD PMID:27445138 NCBI chr 8:129,548,431...129,843,555 JBrowse link
G Unc5c unc-5 netrin receptor C involved_in
acts_upstream_of_or_within
IEA
ISO
GO_REF:0000107
MGI:1857013|MGI:1857852 (PMID:10818148), (PMID:1401878), (PMID:9126743), (PMID:9550145)
Ensembl
RGD
PMID:1401878 PMID:9126743 PMID:9550145 PMID:10818148 GO_REF:0000107 NCBI chr 2:230,180,353...230,535,219 JBrowse link
G Upf3b UPF3B, regulator of nonsense mediated mRNA decay acts_upstream_of ISO (PMID:23821644) RGD PMID:23821644 NCBI chr  X:116,335,308...116,353,332 JBrowse link
G Utp3 UTP3, small subunit processome component involved_in ISS
ISO
GO_REF:0000024
(PMID:11404095)
UniProt
RGD
PMID:11404095 GO_REF:0000024 NCBI chr14:19,799,766...19,801,420 JBrowse link
G Vax1 ventral anterior homeobox 1 acts_upstream_of_or_within
involved_in
ISO
IBA
MGI:1859863|MGI:1859922 (PMID:10601035), (PMID:10601036)
GO_REF:0000033
RGD
GO_Central
PMID:10601035 PMID:10601036 GO_REF:0000033 NCBI chr 1:258,324,571...258,342,396 JBrowse link
G Vax2 ventral anterior homeobox 2 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr 4:116,195,528...116,219,597 JBrowse link
G Vps13b vacuolar protein sorting 13 homolog B acts_upstream_of_or_within ISO (PMID:37573958) RGD PMID:37573958 NCBI chr 7:66,557,862...67,128,429 JBrowse link
G Wdr47 WD repeat domain 47 acts_upstream_of_or_within ISO MGI:4433065|MGI:6102912 (PMID:29078390) RGD PMID:29078390 NCBI chr 2:196,226,757...196,287,739 JBrowse link
G Zfp335 zinc finger protein 335 involved_in ISS
ISO
IBA
GO_REF:0000024
(PMID:23178126)
GO_REF:0000033
UniProt
RGD
GO_Central
PMID:23178126 GO_REF:0000024 GO_REF:0000033 NCBI chr 3:153,618,587...153,648,213 JBrowse link
G Zic1 Zic family member 1 involved_in ISO (PMID:8542595)
(PMID:7931345)
RGD PMID:7931345 PMID:8542595 NCBI chr 8:100,785,282...100,797,716 JBrowse link
brain morphogenesis term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Afdn afadin, adherens junction formation factor acts_upstream_of_or_within ISO MGI:95387 (PMID:25100583) RGD PMID:25100583 NCBI chr 1:53,905,344...54,034,216 JBrowse link
G Akt3 AKT serine/threonine kinase 3 involved_in
acts_upstream_of_or_within
IEA
ISO
GO_REF:0000107
MGI:3574346 (PMID:15713641)
Ensembl
RGD
PMID:15713641 GO_REF:0000107 NCBI chr13:91,475,839...91,758,060 JBrowse link
G Bbs1 Bardet-Biedl syndrome 1 acts_upstream_of_or_within ISO MGI:3767672 (PMID:18032602) RGD PMID:18032602 NCBI chr 1:202,184,812...202,204,118 JBrowse link
G Bbs2 Bardet-Biedl syndrome 2 acts_upstream_of_or_within ISO MGI:3521669 (PMID:18032602) RGD PMID:18032602 NCBI chr19:10,909,653...10,944,998 JBrowse link
G Bbs4 Bardet-Biedl syndrome 4 acts_upstream_of_or_within ISO MGI:3045473 (PMID:18032602) RGD PMID:18032602 NCBI chr 8:59,731,912...59,765,408 JBrowse link
G Cdh2 cadherin 2 involved_in
acts_upstream_of_or_within
IEA
ISO
GO_REF:0000107
MGI:95387 (PMID:25100583)
Ensembl
RGD
PMID:25100583 GO_REF:0000107 NCBI chr18:8,051,097...8,265,288 JBrowse link
G Ctnna2 catenin alpha 2 involved_in ISO (PMID:12089526), (PMID:16691566) RGD PMID:12089526 PMID:16691566 NCBI chr 4:109,294,249...110,443,409 JBrowse link
G Emx1 empty spiracles homeobox 1 acts_upstream_of_or_within ISO MGI:1314653|MGI:2682313|MGI:88355 (PMID:23178126), (PMID:25100583) RGD PMID:23178126 PMID:25100583 NCBI chr 4:117,725,148...117,741,616 JBrowse link
G Fancc FA complementation group C involved_in
acts_upstream_of_or_within
IEA
ISO
GO_REF:0000107
MGI:1890081 (PMID:24483844)
Ensembl
RGD
PMID:24483844 GO_REF:0000107 NCBI chr17:1,686,374...1,818,672 JBrowse link
G Fancd2 FA complementation group D2 involved_in
acts_upstream_of_or_within
IEA
ISO
GO_REF:0000107
MGI:1890081 (PMID:24483844)
Ensembl
RGD
PMID:24483844 GO_REF:0000107 NCBI chr 4:148,234,633...148,299,035 JBrowse link
G Fbxw11 F-box and WD repeat domain containing 11 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr10:17,232,735...17,330,574 JBrowse link
G Foxo3 forkhead box O3 acts_upstream_of_or_within ISO MGI:2448480|MGI:95480 (PMID:24483844) RGD PMID:24483844 NCBI chr20:47,251,968...47,348,254 JBrowse link
G Gba1 glucosylceramidase beta 1 acts_upstream_of_or_within ISO (PMID:17954912) RGD PMID:17954912 NCBI chr 2:176,902,141...176,916,015 JBrowse link
G Mir124-1 microRNA 124-1 acts_upstream_of_or_within ISO MGI:5307015|MGI:5307017 (PMID:21857657) RGD PMID:21857657 NCBI chr15:38,842,014...38,842,098 JBrowse link
G Mkks MKKS centrosomal shuttling protein acts_upstream_of_or_within ISO MGI:3526444 (PMID:18032602) RGD PMID:18032602 NCBI chr 3:144,654,563...144,672,831 JBrowse link
G Nfix nuclear factor I X acts_upstream_of_or_within ISO MGI:3802571 (PMID:30503862) RGD PMID:30503862 NCBI chr19:23,355,388...23,450,360 JBrowse link
G Pafah1b1 platelet-activating factor acetylhydrolase 1b, regulatory subunit 1 involved_in ISO
IBA
(PMID:9063735)
GO_REF:0000033
RGD
GO_Central
PMID:9063735 GO_REF:0000033 NCBI chr10:59,533,042...59,591,808 JBrowse link
G Pax2 paired box 2 involved_in ISS
ISO
GO_REF:0000024
(PMID:8951055)
UniProt
RGD
PMID:8951055 GO_REF:0000024 NCBI chr 1:243,616,509...243,697,454 JBrowse link
G Pcnt pericentrin acts_upstream_of_or_within ISO MGI:3799303 (PMID:20096683) RGD PMID:20096683 NCBI chr20:12,190,597...12,278,723 JBrowse link
G Psen1 presenilin 1 acts_upstream_of_or_within ISO MGI:109284 (PMID:17614943) RGD PMID:17614943 NCBI chr 6:109,054,160...109,106,191 JBrowse link
G Psen2 presenilin 2 acts_upstream_of_or_within ISO MGI:1202717 (PMID:17614943) RGD PMID:17614943 NCBI chr13:94,499,451...94,528,419 JBrowse link
G Pten phosphatase and tensin homolog involved_in ISO (PMID:19208814) RGD PMID:19208814 NCBI chr 1:240,043,707...240,110,330 JBrowse link
G Shank3 SH3 and multiple ankyrin repeat domains 3 involved_in ISS
ISO
IEA
GO_REF:0000024
(PMID:21423165)
GO_REF:0000107
BHF-UCL
RGD
Ensembl
PMID:21423165 GO_REF:0000024 GO_REF:0000107 NCBI chr 7:120,568,707...120,630,796 JBrowse link
G Slc4a10 solute carrier family 4 member 10 involved_in
acts_upstream_of_or_within
IEA
ISO
GO_REF:0000107
MGI:3774019 (PMID:18165320)
Ensembl
RGD
PMID:18165320 GO_REF:0000107 NCBI chr 3:46,665,076...46,959,088 JBrowse link
G Slc6a4 solute carrier family 6 member 4 involved_in ISO (PMID:19208814) RGD PMID:19208814 NCBI chr10:62,322,688...62,357,060 JBrowse link
G Spef2 sperm flagellar 2 acts_upstream_of_or_within ISO MGI:5295267 (PMID:21715716) RGD PMID:21715716 NCBI chr 2:58,512,489...58,694,718 JBrowse link
G Vps51 VPS51 subunit of GARP complex involved_in ISO (PMID:30624672), (PMID:31207318) RGD PMID:30624672 PMID:31207318 NCBI chr 1:203,360,434...203,370,422 JBrowse link
G Zfp335 zinc finger protein 335 involved_in
acts_upstream_of_or_within
IEA
ISO
GO_REF:0000107
MGI:5470136|MGI:95387 (PMID:23178126)
Ensembl
RGD
PMID:23178126 GO_REF:0000107 NCBI chr 3:153,618,587...153,648,213 JBrowse link
brain segmentation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Egr2 early growth response 2 acts_upstream_of_or_within ISO MGI:1857507 (PMID:7903221) RGD PMID:7903221 NCBI chr20:21,051,270...21,056,322 JBrowse link
G Hoxa2 homeobox A2 involved_in
acts_upstream_of_or_within
IEA
ISO
GO_REF:0000107
MGI:1857626 (PMID:9367425)
Ensembl
RGD
PMID:9367425 GO_REF:0000107 NCBI chr 4:81,262,668...81,266,970 JBrowse link
G Mafb MAF bZIP transcription factor B acts_upstream_of_or_within ISO MGI:1856419 (PMID:7925021) RGD PMID:7925021 NCBI chr 3:169,417,890...169,419,810 JBrowse link
Cajal-Retzius cell differentiation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Hes1 hes family bHLH transcription factor 1 involved_in
acts_upstream_of
IEA
ISO
GO_REF:0000107
MGI:104876 (PMID:18579678)
Ensembl
RGD
PMID:18579678 GO_REF:0000107 NCBI chr11:70,705,763...70,708,176 JBrowse link
G Neurog2 neurogenin 2 acts_upstream_of ISO (PMID:18579678) RGD PMID:18579678 NCBI chr 2:216,092,709...216,095,276 JBrowse link
G Psen1 presenilin 1 acts_upstream_of_or_within ISO MGI:2149116 (PMID:15548218) RGD PMID:15548218 NCBI chr 6:109,054,160...109,106,191 JBrowse link
caudate nucleus development term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Foxp2 forkhead box P2 involved_in ISO
IEA
(PMID:11872605)
GO_REF:0000107
RGD
Ensembl
PMID:11872605 GO_REF:0000107 NCBI chr 4:44,099,848...44,677,700 JBrowse link
cell differentiation in hindbrain term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Foxa2 forkhead box A2 acts_upstream_of_or_within ISO MGI:1347476|MGI:2176222|MGI:2177337 (PMID:17922007) RGD PMID:17922007 NCBI chr 3:135,470,123...135,474,326 JBrowse link
G Gata2 GATA binding protein 2 acts_upstream_of_or_within ISO MGI:1857743 (PMID:10357893) RGD PMID:10357893 NCBI chr 4:120,654,205...120,667,763 JBrowse link
G Nog noggin involved_in ISO
IEA
(PMID:8582276)
GO_REF:0000107
RGD
Ensembl
PMID:8582276 GO_REF:0000107 NCBI chr10:74,625,874...74,627,501 JBrowse link
G Phox2b paired-like homeobox 2b acts_upstream_of_or_within ISO MGI:1926861 (PMID:17922007) RGD PMID:17922007 NCBI chr14:41,420,011...41,424,527 JBrowse link
cell differentiation in spinal cord term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Dbx1 developing brain homeobox 1 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr 1:99,348,638...99,354,173 JBrowse link
G Notch1 notch receptor 1 IEP RGD PMID:20195794 RGD:2325285 NCBI chr 3:29,676,040...29,721,613 JBrowse link
cell migration in diencephalon term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Foxb1 forkhead box B1 involved_in ISO (PMID:19046377) RGD PMID:19046377 NCBI chr 8:70,407,221...70,409,841 JBrowse link
cell migration in hindbrain term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Nhlh2 nescient helix loop helix 2 acts_upstream_of_or_within ISO UniProtKB:Q02576 (PMID:17573818) RGD PMID:17573818 NCBI chr 2:189,444,287...189,449,625 JBrowse link
G Pou4f1 POU class 4 homeobox 1 involved_in
acts_upstream_of_or_within
IEA
ISO
GO_REF:0000107
MGI:3512302 (PMID:8955272)
Ensembl
RGD
PMID:8955272 GO_REF:0000107 NCBI chr15:87,668,328...87,674,643 JBrowse link
G Sema4c semaphorin 4C involved_in ISO (PMID:21122816) RGD PMID:21122816 NCBI chr 9:38,791,668...38,802,171 JBrowse link
cell motility involved in cerebral cortex radial glia guided migration term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Bmerb1 bMERB domain containing 1 acts_upstream_of ISO (PMID:25099998) RGD PMID:25099998 NCBI chr10:1,779,834...1,946,586 JBrowse link
G Dab2ip DAB2 interacting protein involved_in ISS
ISO
IEA
GO_REF:0000024
(PMID:23056358)
GO_REF:0000107
UniProt
RGD
Ensembl
PMID:23056358 GO_REF:0000024 GO_REF:0000107 NCBI chr 3:18,915,290...19,086,282 JBrowse link
cell proliferation in external granule layer term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Shh sonic hedgehog signaling molecule acts_upstream_of_or_within ISO (PMID:10970885) RGD PMID:10970885 NCBI chr 4:6,954,017...6,963,170 JBrowse link
cell proliferation in forebrain term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Arx aristaless related homeobox involved_in
acts_upstream_of_or_within
IEA
ISO
GO_REF:0000107
MGI:2429693 (PMID:15677725)
Ensembl
RGD
PMID:15677725 GO_REF:0000107 NCBI chr  X:58,016,233...58,028,149 JBrowse link
G Disc1 DISC1 scaffold protein involved_in ISO (PMID:20624590) RGD PMID:20624590 NCBI chr19:53,014,201...53,223,617 JBrowse link
G Dixdc1 DIX domain containing 1 involved_in ISO (PMID:20624590) RGD PMID:20624590 NCBI chr 8:59,904,218...59,977,595 JBrowse link
G Emx2 empty spiracles homeobox 2 acts_upstream_of_or_within ISO MGI:2148858 (PMID:10729342) RGD PMID:10729342 NCBI chr 1:258,626,584...258,633,594 JBrowse link
G Fabp7 fatty acid binding protein 7 acts_upstream_of_or_within ISO MGI:3665437 (PMID:18001149) RGD PMID:18001149 NCBI chr20:37,123,193...37,126,725 JBrowse link
G Fgf8 fibroblast growth factor 8 acts_upstream_of_or_within ISO MGI:1857843|MGI:2150348 (PMID:16613831) RGD PMID:16613831 NCBI chr 1:244,584,477...244,590,578 JBrowse link
G Hmga2 high mobility group AT-hook 2 acts_upstream_of_or_within ISO MGI:2386412 (PMID:18957199) RGD PMID:18957199 NCBI chr 7:57,762,710...57,884,555 JBrowse link
G Kif14 kinesin family member 14 involved_in ISO (PMID:23308235) RGD PMID:23308235 NCBI chr13:50,478,646...50,542,256 JBrowse link
G Lhx5 LIM homeobox 5 acts_upstream_of_or_within ISO MGI:2152620 (PMID:10325223) RGD PMID:10325223 NCBI chr12:36,126,186...36,134,625 JBrowse link
G Ncor2 nuclear receptor co-repressor 2 acts_upstream_of_or_within ISO MGI:3765904 (PMID:17928865) RGD PMID:17928865 NCBI chr12:37,127,736...37,289,612 JBrowse link
G Nfib nuclear factor I/B involved_in ISO MGI:5052268 (PMID:27965439) RGD PMID:27965439 NCBI chr 5:101,805,168...102,020,618 JBrowse link
G Nfix nuclear factor I X involved_in ISO MGI:3802570 (PMID:27965439) RGD PMID:27965439 NCBI chr19:23,355,388...23,450,360 JBrowse link
G Ngf nerve growth factor IMP RGD PMID:29409115 RGD:402463967 NCBI chr 2:192,589,580...192,642,971 JBrowse link
G Rrm1 ribonucleotide reductase catalytic subunit M1 IEP RGD PMID:12834878 RGD:5133694 NCBI chr 1:156,823,960...156,848,262 JBrowse link
G Six3 SIX homeobox 3 involved_in ISO (PMID:18694563) RGD PMID:18694563 NCBI chr 6:9,039,017...9,043,336 JBrowse link
G Wnt3a Wnt family member 3A involved_in ISO (PMID:12843296) RGD PMID:12843296 NCBI chr10:44,533,734...44,577,919 JBrowse link
G Wnt7a Wnt family member 7A involved_in ISO (PMID:12843296) RGD PMID:12843296 NCBI chr 4:123,863,108...123,908,981 JBrowse link
G Wnt7b Wnt family member 7B involved_in ISO (PMID:12843296) RGD PMID:12843296 NCBI chr 7:118,514,684...118,559,316 JBrowse link
G Zeb2 zinc finger E-box binding homeobox 2 acts_upstream_of_or_within ISO MGI:2387499|MGI:2684610 (PMID:17644613) RGD PMID:17644613 NCBI chr 3:29,214,581...29,344,890 JBrowse link
cell proliferation in hindbrain term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G C5ar1 complement C5a receptor 1 IMP RGD PMID:18635264 RGD:5129699 NCBI chr 1:76,948,622...76,959,826 JBrowse link
cell proliferation in midbrain term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Fzd3 frizzled class receptor 3 acts_upstream_of_or_within ISO MGI:108474 (PMID:19842188) RGD PMID:19842188 NCBI chr15:39,421,366...39,488,369 JBrowse link
G Fzd6 frizzled class receptor 6 acts_upstream_of_or_within ISO MGI:108476 (PMID:19842188) RGD PMID:19842188 NCBI chr 7:70,055,012...70,086,781 JBrowse link
G Wnt1 Wnt family member 1 involved_in ISO (PMID:14557550), (PMID:15121182) RGD PMID:14557550 PMID:15121182 NCBI chr 7:131,817,558...131,821,605 JBrowse link
G Wnt2 Wnt family member 2 involved_in ISO (PMID:20018874) RGD PMID:20018874 NCBI chr 4:46,328,408...46,374,673 JBrowse link
G Wnt3a Wnt family member 3A involved_in ISO (PMID:14557550) RGD PMID:14557550 NCBI chr10:44,533,734...44,577,919 JBrowse link
cell-cell adhesion involved in neuronal-glial interactions involved in cerebral cortex radial glia guided migration term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Dab1 DAB adaptor protein 1 involved_in
acts_upstream_of_or_within
IEA
ISO
GO_REF:0000107
MGI:1856801 (PMID:15091337)
Ensembl
RGD
PMID:15091337 GO_REF:0000107 NCBI chr 5:118,392,953...119,513,625 JBrowse link
central nervous system formation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Sptbn1 spectrin, beta, non-erythrocytic 1 involved_in ISO (PMID:34211179) RGD PMID:34211179 NCBI chr14:103,841,713...104,016,900 JBrowse link
central nervous system interneuron axonogenesis term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Tctn1 tectonic family member 1 acts_upstream_of_or_within ISO MGI:3716885 (PMID:16357211) RGD PMID:16357211 NCBI chr12:39,970,554...40,003,727 JBrowse link
central nervous system maturation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Atp6ap2 ATPase H+ transporting accessory protein 2 involved_in ISS
ISO
IEA
GO_REF:0000024
(PMID:30985297)
GO_REF:0000107
UniProt
RGD
Ensembl
PMID:30985297 GO_REF:0000024 GO_REF:0000107 NCBI chr  X:10,183,983...10,210,948 JBrowse link
G Cx3cr1 C-X3-C motif chemokine receptor 1 involved_in ISO (PMID:24487234) RGD PMID:24487234 NCBI chr 8:128,661,294...128,679,048 JBrowse link
central nervous system morphogenesis term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Erbb4 erb-b2 receptor tyrosine kinase 4 involved_in ISS
ISO
IEA
GO_REF:0000024
(PMID:10655590)
GO_REF:0000107
UniProt
RGD
Ensembl
PMID:10655590 GO_REF:0000024 GO_REF:0000107 NCBI chr 9:76,973,386...78,045,633 JBrowse link
G Wnt1 Wnt family member 1 involved_in ISO (PMID:2202907) RGD PMID:2202907 NCBI chr 7:131,817,558...131,821,605 JBrowse link
central nervous system myelin formation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Abca2 ATP binding cassette subfamily A member 2 involved_in
acts_upstream_of_or_within
IDA
ISO
PMID:12210128
(PMID:17060448)
RGD PMID:17060448 PMID:12210128 RGD:631995 NCBI chr 3:28,642,660...28,662,689 JBrowse link
G Ckap5 cytoskeleton associated protein 5 acts_upstream_of_or_within ISO MGI:3051635|MGI:5570192 (PMID:28063167) RGD PMID:28063167 NCBI chr 3:97,946,966...98,049,050 JBrowse link
G Cntn1 contactin 1 involved_in IEA
ISO
GO_REF:0000107
MGI:96912 (PMID:31641127)
Ensembl
RGD
PMID:31641127 GO_REF:0000107 NCBI chr 7:123,263,146...123,560,896 JBrowse link
G Ercc2 ERCC excision repair 2, TFIIH core complex helicase subunit acts_upstream_of_or_within ISO MGI:2183949 (PMID:17952069) RGD PMID:17952069 NCBI chr 1:88,161,342...88,175,102 JBrowse link
G Mag myelin-associated glycoprotein involved_in ISO MGI:105980 (PMID:31641127) RGD PMID:31641127 NCBI chr 1:86,148,227...86,163,726 JBrowse link
G Mios meiosis regulator for oocyte development involved_in ISO (PMID:35022234) RGD PMID:35022234 NCBI chr 4:37,229,533...37,255,862 JBrowse link
G Mobp myelin-associated oligodendrocyte basic protein IEP RGD PMID:9306245 RGD:27226697 NCBI chr 8:119,869,504...119,899,605 JBrowse link
G Tenm4 teneurin transmembrane protein 4 involved_in ISO (PMID:26188006)
(PMID:22915103)
RGD PMID:22915103 PMID:26188006 NCBI chr 1:149,895,097...151,263,315 JBrowse link
G Tlr2 toll-like receptor 2 IDA RGD PMID:21971760 RGD:7241097 NCBI chr 2:171,499,189...171,504,831 JBrowse link
central nervous system myelin maintenance term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Clu clusterin involved_in ISO
ISS
IEA
(PMID:21543606)
GO_REF:0000024
GO_REF:0000107
RGD
Alzheimers_University_of_Toronto
Ensembl
PMID:21543606 GO_REF:0000024 GO_REF:0000107 NCBI chr15:40,161,068...40,200,315 JBrowse link
G Fa2h fatty acid 2-hydroxylase acts_upstream_of_or_within ISO MGI:3829000|MGI:4430585 (PMID:18815260), (PMID:21491498) RGD PMID:18815260 PMID:21491498 NCBI chr19:39,312,904...39,364,153 JBrowse link
G Myrf myelin regulatory factor involved_in IBA
ISO
GO_REF:0000033
(PMID:22956843)
GO_Central
RGD
PMID:22956843 GO_REF:0000033 NCBI chr 1:206,854,175...206,886,276 JBrowse link
G Pten phosphatase and tensin homolog involved_in ISO (PMID:18082964) RGD PMID:18082964 NCBI chr 1:240,043,707...240,110,330 JBrowse link
central nervous system myelination term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Aspa aspartoacylase IEP RGD PMID:12524181 RGD:632029 NCBI chr10:57,891,704...57,945,267 JBrowse link
G B4galt5 beta-1,4-galactosyltransferase 5 involved_in ISO (PMID:30114188) RGD PMID:30114188 NCBI chr 3:156,018,056...156,033,983 JBrowse link
G B4galt6 beta-1,4-galactosyltransferase 6 involved_in ISS
ISO
GO_REF:0000024
(PMID:30114188)
UniProt
RGD
PMID:30114188 GO_REF:0000024 NCBI chr18:11,958,382...12,015,247 JBrowse link
G Ccdc39 coiled-coil domain 39 molecular ruler complex subunit acts_upstream_of_or_within
involved_in
ISO
IEA
(PMID:34992132)
GO_REF:0000107
RGD
Ensembl
PMID:34992132 GO_REF:0000107 NCBI chr 2:116,665,651...116,703,354 JBrowse link
G Cntn2 contactin 2 acts_upstream_of_or_within
involved_in
ISO
IEA
MGI:2181052 (PMID:18650339)
GO_REF:0000107
RGD
Ensembl
PMID:18650339 GO_REF:0000107 NCBI chr13:43,942,868...43,975,973 JBrowse link
G Cntnap1 contactin associated protein 1 involved_in ISO
ISS
(PMID:28374019)
GO_REF:0000024
RGD
UniProt
PMID:28374019 GO_REF:0000024 NCBI chr10:86,109,850...86,125,612 JBrowse link
G Cntnap2 contactin associated protein 2 involved_in ISO MGI:2677631 (PMID:29300891) RGD PMID:29300891 NCBI chr 4:74,109,455...76,366,434 JBrowse link
G Enpp1 ectonucleotide pyrophosphatase/phosphodiesterase 1 involved_in ISO MGI:1857079 (PMID:21935678) RGD PMID:21935678 NCBI chr 1:22,518,051...22,583,044 JBrowse link
G Fgfr3 fibroblast growth factor receptor 3 acts_upstream_of_or_within ISO MGI:1931521 (PMID:12574417) RGD PMID:12574417 NCBI chr14:81,211,800...81,227,215 JBrowse link
G Gpm6b glycoprotein m6b involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr  X:28,057,788...28,204,409 JBrowse link
G Hes5 hes family bHLH transcription factor 5 involved_in
acts_upstream_of_or_within
ISS
ISO
GO_REF:0000024
MGI:2149674 (PMID:17006542)
UniProt
RGD
PMID:17006542 GO_REF:0000024 NCBI chr 5:170,804,511...170,807,988 JBrowse link
G Id4 inhibitor of DNA binding 4 acts_upstream_of_or_within ISO MGI:3579084 (PMID:16862533) RGD PMID:16862533 NCBI chr17:16,389,387...16,391,956 JBrowse link
G Kcnj10 potassium inwardly-rectifying channel, subfamily J, member 10 involved_in
acts_upstream_of_or_within
IEA
ISO
GO_REF:0000107
MGI:3655847|MGI:3761690 (PMID:17942730)
Ensembl
RGD
PMID:17942730 GO_REF:0000107 NCBI chr13:84,802,026...84,835,383 JBrowse link
G Mag myelin-associated glycoprotein involved_in ISO (PMID:9482783) RGD PMID:9482783 NCBI chr 1:86,148,227...86,163,726 JBrowse link
G Mal mal, T-cell differentiation protein acts_upstream_of ISO MGI:3053860 (PMID:15337780) RGD PMID:15337780 NCBI chr 3:114,864,378...114,888,136 JBrowse link
G Myrf myelin regulatory factor involved_in ISO (PMID:24204311), (PMID:27532821)
(PMID:19596243)
RGD PMID:19596243 PMID:24204311 PMID:27532821 NCBI chr 1:206,854,175...206,886,276 JBrowse link
G Ncstn nicastrin acts_upstream_of_or_within ISO MGI:3796837 (PMID:27008863) RGD PMID:27008863 NCBI chr13:87,062,827...87,078,839 JBrowse link
G Nkx6-2 NK6 homeobox 2 acts_upstream_of_or_within ISO MGI:3522433 (PMID:15601927) RGD PMID:15601927 NCBI chr 1:194,380,149...194,383,533 JBrowse link
G Plp1 proteolipid protein 1 involved_in
acts_upstream_of_or_within
IBA
ISO
GO_REF:0000033
MGI:1856067 (PMID:1694232)
GO_Central
RGD
PMID:1694232 GO_REF:0000033 NCBI chr  X:104,933,921...104,993,317 JBrowse link
G Sox10 SRY-box transcription factor 10 involved_in ISS
ISO
GO_REF:0000024
(PMID:24204311), (PMID:27532821)
UniProt
RGD
PMID:24204311 PMID:27532821 GO_REF:0000024 NCBI chr 7:110,725,274...110,734,651 JBrowse link
G Ulk4 unc-51 like kinase 4 acts_upstream_of_or_within ISO MGI:4362969 (PMID:29034508) RGD PMID:29034508 NCBI chr 8:129,548,431...129,843,555 JBrowse link
central nervous system neuron axonogenesis term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Arhgap35 Rho GTPase activating protein 35 involved_in ISS
ISO
GO_REF:0000024
(PMID:11283609)
UniProt
RGD
PMID:11283609 GO_REF:0000024 NCBI chr 1:77,202,436...77,319,298 JBrowse link
G Arhgef28 Rho guanine nucleotide exchange factor 28 involved_in
acts_upstream_of_or_within
IEA
ISO
GO_REF:0000107
(PMID:15378065)
Ensembl
RGD
PMID:15378065 GO_REF:0000107 NCBI chr 2:29,263,888...29,560,595 JBrowse link
G Atg7 autophagy related 7 acts_upstream_of_or_within ISO MGI:3587769 (PMID:20577052) RGD PMID:20577052 NCBI chr 4:149,390,000...149,597,534 JBrowse link
G B4galt5 beta-1,4-galactosyltransferase 5 involved_in ISO (PMID:30114188) RGD PMID:30114188 NCBI chr 3:156,018,056...156,033,983 JBrowse link
G B4galt6 beta-1,4-galactosyltransferase 6 involved_in ISS
ISO
GO_REF:0000024
(PMID:30114188)
UniProt
RGD
PMID:30114188 GO_REF:0000024 NCBI chr18:11,958,382...12,015,247 JBrowse link
G Chrnb2 cholinergic receptor nicotinic beta 2 subunit acts_upstream_of_or_within ISO MGI:2158714 (PMID:12097474) RGD PMID:12097474 NCBI chr 2:175,181,402...175,189,619 JBrowse link
G Ndel1 nudE neurodevelopment protein 1-like 1 involved_in
acts_upstream_of_or_within
IEA
ISO
GO_REF:0000107
(PMID:15208636)
Ensembl
RGD
PMID:15208636 GO_REF:0000107 NCBI chr10:53,505,628...53,582,025 JBrowse link
G Prkca protein kinase C, alpha IMP RGD PMID:18062921 RGD:2293300 NCBI chr10:93,388,991...93,787,617 JBrowse link
G Pten phosphatase and tensin homolog involved_in ISO (PMID:16675393) RGD PMID:16675393 NCBI chr 1:240,043,707...240,110,330 JBrowse link
G Ptk2 protein tyrosine kinase 2 acts_upstream_of_or_within ISO MGI:1857596 (PMID:15378065) RGD PMID:15378065 NCBI chr 7:107,015,730...107,220,865 JBrowse link
central nervous system neuron development term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Agbl4 AGBL carboxypeptidase 4 acts_upstream_of_or_within ISO MGI:1918244 (PMID:30420556) RGD PMID:30420556 NCBI chr 5:130,483,551...131,762,906 JBrowse link
G Agtpbp1 ATP/GTP binding carboxypeptidase 1 acts_upstream_of_or_within ISO MGI:1918244 (PMID:30420556) RGD PMID:30420556 NCBI chr17:5,120,540...5,238,874 JBrowse link
G Ascl1 achaete-scute family bHLH transcription factor 1 acts_upstream_of_or_within ISO MGI:109619|MGI:1857470 (PMID:15169849), (PMID:16469766) RGD PMID:15169849 PMID:16469766 NCBI chr 7:21,903,136...21,906,003 JBrowse link
G Atp7a ATPase copper transporting alpha acts_upstream_of_or_within ISO MGI:1856098 (PMID:8174230) RGD PMID:8174230 NCBI chr  X:75,159,635...75,267,094 JBrowse link
G Brinp1 BMP/retinoic acid inducible neural specific 1 involved_in IEA
ISO
GO_REF:0000107
(PMID:20025061)
Ensembl
RGD
PMID:20025061 GO_REF:0000107 NCBI chr 5:82,348,501...82,550,506 JBrowse link
G Btg2 BTG anti-proliferation factor 2 acts_upstream_of_or_within ISO MGI:3525505 (PMID:20020054) RGD PMID:20020054 NCBI chr13:48,083,931...48,087,690 JBrowse link
G Cdk5 cyclin-dependent kinase 5 involved_in
acts_upstream_of_or_within
IEA
ISO
GO_REF:0000107
MGI:1861809 (PMID:8855328)
Ensembl
RGD
PMID:8855328 GO_REF:0000107 NCBI chr 4:11,647,098...11,651,606 JBrowse link
G Fgf8 fibroblast growth factor 8 IMP development of dopaminergic neurons in the midbrain and serotonergic neurons in the rostral hindbrain RGD PMID:9630220 RGD:2289424 NCBI chr 1:244,584,477...244,590,578 JBrowse link
G Fgfr1 Fibroblast growth factor receptor 1 IMP RGD PMID:17314281 RGD:2325182 NCBI chr16:73,194,631...73,249,855 JBrowse link
G Foxg1 forkhead box G1 acts_upstream_of_or_within ISO (PMID:16680166) RGD PMID:16680166 NCBI chr 6:66,674,797...66,677,611 JBrowse link
G Gabrb1 gamma-aminobutyric acid type A receptor subunit beta1 IEP RGD PMID:15158077 RGD:6480239 NCBI chr14:36,068,725...36,548,946 JBrowse link
G Gata2 GATA binding protein 2 acts_upstream_of_or_within ISO MGI:1857743 (PMID:10357893) RGD PMID:10357893 NCBI chr 4:120,654,205...120,667,763 JBrowse link
G Gba2 glucosylceramidase beta 2 involved_in ISS
IEA
ISO
GO_REF:0000024
GO_REF:0000107
(PMID:23332916)
UniProt
Ensembl
RGD
PMID:23332916 GO_REF:0000024 GO_REF:0000107 NCBI chr 5:57,822,389...57,834,522 JBrowse link
G Hprt1 hypoxanthine phosphoribosyltransferase 1 involved_in
acts_upstream_of_or_within
IEA
ISO
GO_REF:0000107
MGI:1857299 (PMID:9886073)
Ensembl
RGD
PMID:9886073 GO_REF:0000107 NCBI chr  X:132,736,175...132,768,149 JBrowse link
G Kiaa0319 KIAA0319 homolog acts_upstream_of_or_within ISO (PMID:35419947) RGD PMID:35419947 NCBI chr17:40,162,512...40,226,666 JBrowse link
G Lep leptin acts_upstream_of_or_within ISO MGI:1856424 (PMID:10592285) RGD PMID:10592285 NCBI chr 4:58,626,529...58,640,663 JBrowse link
G Lingo1 leucine rich repeat and Ig domain containing 1 acts_upstream_of_or_within ISO MGI:3623893 (PMID:17726113) RGD PMID:17726113 NCBI chr 8:57,011,272...57,193,496 JBrowse link
G Lmx1b LIM homeobox transcription factor 1 beta acts_upstream_of_or_within ISO MGI:3696968|MGI:3696982 (PMID:17151281) RGD PMID:17151281 NCBI chr 3:16,862,195...16,940,899 JBrowse link
G Map2 microtubule-associated protein 2 involved_in ISO
IEA
(PMID:20846339)
GO_REF:0000107
RGD
Ensembl
PMID:20846339 GO_REF:0000107 NCBI chr 9:75,173,038...75,431,606 JBrowse link
G Neurog2 neurogenin 2 acts_upstream_of_or_within ISO MGI:2159010|MGI:2159011|MGI:2673381|MGI:96919 (PMID:16410412) RGD PMID:16410412 NCBI chr 2:216,092,709...216,095,276 JBrowse link
G Nova2 NOVA alternative splicing regulator 2 involved_in ISO (PMID:27223325) RGD PMID:27223325 NCBI chr 1:87,700,328...87,741,755 JBrowse link
G Npy neuropeptide Y involved_in ISO
IEA
(PMID:20846339)
GO_REF:0000107
RGD
Ensembl
PMID:20846339 GO_REF:0000107 NCBI chr 4:80,212,111...80,219,310 JBrowse link
G Ntrk2 neurotrophic receptor tyrosine kinase 2 involved_in ISS
ISO
IEA
GO_REF:0000024
(PMID:8402890)
GO_REF:0000107
UniProt
RGD
Ensembl
PMID:8402890 GO_REF:0000024 GO_REF:0000107 NCBI chr17:5,560,558...5,875,899 JBrowse link
G Pals1 protein associated with LIN7 1, MAGUK p55 family member involved_in ISS
ISO
GO_REF:0000024
(PMID:20399730)
UniProt
RGD
PMID:20399730 GO_REF:0000024 NCBI chr 6:103,327,965...103,384,543 JBrowse link
G Taok1 TAO kinase 1 involved_in ISS
ISO
IEA
GO_REF:0000024
(PMID:33565190)
GO_REF:0000107
UniProt
RGD
Ensembl
PMID:33565190 GO_REF:0000024 GO_REF:0000107 NCBI chr10:62,871,198...62,989,049 JBrowse link
G Ttc36 tetratricopeptide repeat domain 36 acts_upstream_of_or_within ISO MGI:5588394 (PMID:31537781) RGD PMID:31537781 NCBI chr 8:54,009,522...54,013,129 JBrowse link
central nervous system neuron differentiation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Bcl11b BCL11 transcription factor B acts_upstream_of_or_within ISO MGI:1352456 (PMID:18215621) RGD PMID:18215621 NCBI chr 6:126,834,531...126,927,720 JBrowse link
G Bmpr1a bone morphogenetic protein receptor type 1A acts_upstream_of_or_within ISO MGI:107191 (PMID:15469980) RGD PMID:15469980 NCBI chr16:9,740,751...9,786,861 JBrowse link
G Bmpr1b bone morphogenetic protein receptor type 1B acts_upstream_of_or_within ISO MGI:1338938 (PMID:15469980) RGD PMID:15469980 NCBI chr 2:233,211,525...233,544,344 JBrowse link
G Brinp1 BMP/retinoic acid inducible neural specific 1 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr 5:82,348,501...82,550,506 JBrowse link
G Brinp2 BMP/retinoic acid inducible neural specific 2 involved_in IEA
IBA
ISO
GO_REF:0000107
GO_REF:0000033
(PMID:20025061)
Ensembl
GO_Central
RGD
PMID:20025061 GO_REF:0000033 GO_REF:0000107 NCBI chr13:70,431,006...70,532,766 JBrowse link
G Brinp3 BMP/retinoic acid inducible neural specific 3 involved_in ISS
IBA
ISO
GO_REF:0000024
GO_REF:0000033
(PMID:20025061)
UniProt
GO_Central
RGD
PMID:20025061 GO_REF:0000024 GO_REF:0000033 NCBI chr13:58,413,883...58,846,828 JBrowse link
G Cacna1a calcium voltage-gated channel subunit alpha1 A acts_upstream_of_or_within ISO MGI:1856209 (PMID:6945603) RGD PMID:6945603 NCBI chr19:40,425,560...40,724,810 JBrowse link
G Hoxa1 homeobox A1 acts_upstream_of_or_within ISO MGI:1857504 (PMID:9806922) RGD PMID:9806922 NCBI chr 4:81,255,814...81,258,587 JBrowse link
G Lmx1a LIM homeobox transcription factor 1 alpha acts_upstream_of
acts_upstream_of_or_within
ISO MGI:1888413 (PMID:15148302)
MGI:1888413 (PMID:17670789)
RGD PMID:15148302 PMID:17670789 NCBI chr13:79,834,614...79,978,253 JBrowse link
G Met MET proto-oncogene, receptor tyrosine kinase IEP RGD PMID:18262389 RGD:2317458 NCBI chr 4:46,756,823...46,864,041 JBrowse link
G Mnx1 motor neuron and pancreas homeobox 1 acts_upstream_of_or_within ISO MGI:2182358|MGI:2182361|MGI:2182363 (PMID:10482234) RGD PMID:10482234 NCBI chr 4:5,866,506...5,871,465 JBrowse link
G Nkx6-1 NK6 homeobox 1 acts_upstream_of_or_within ISO MGI:2386119 (PMID:19592574) RGD PMID:19592574 NCBI chr14:7,969,756...7,976,689 JBrowse link
G Nr4a2 nuclear receptor subfamily 4, group A, member 2 involved_in
acts_upstream_of_or_within
IBA
ISO
GO_REF:0000033
MGI:2429971 (PMID:11113533)
GO_Central
RGD
PMID:11113533 GO_REF:0000033 NCBI chr 3:41,689,847...41,707,036 JBrowse link
G Pou4f1 POU class 4 homeobox 1 involved_in
acts_upstream_of_or_within
IEA
ISO
GO_REF:0000107
MGI:2387665|MGI:3512302 (PMID:8876243), (PMID:8955272)
Ensembl
RGD
PMID:8876243 PMID:8955272 GO_REF:0000107 NCBI chr15:87,668,328...87,674,643 JBrowse link
G Smo smoothened, frizzled class receptor involved_in
acts_upstream_of_or_within
IEA
ISO
GO_REF:0000107
MGI:2176256|MGI:2446434 (PMID:16571630)
Ensembl
RGD
PMID:16571630 GO_REF:0000107 NCBI chr 4:59,311,084...59,341,280 JBrowse link
G Sox5 SRY-box transcription factor 5 acts_upstream_of_or_within ISO MGI:1929913 (PMID:18215621) RGD PMID:18215621 NCBI chr 4:178,512,272...179,467,686 JBrowse link
G Spock1 sparc/osteonectin, cwcv and kazal like domains proteoglycan 1 involved_in ISO (PMID:10640720) RGD PMID:10640720 NCBI chr17:6,746,892...7,227,034 JBrowse link
G Tal1 TAL bHLH transcription factor 1, erythroid differentiation factor acts_upstream_of_or_within ISO MGI:2176173|MGI:2661471 (PMID:16292311) RGD PMID:16292311 NCBI chr 5:128,586,776...128,600,976 JBrowse link
G Tulp3 TUB like protein 3 acts_upstream_of_or_within ISO MGI:2388066 (PMID:19286674) RGD PMID:19286674 NCBI chr 4:161,590,478...161,632,244 JBrowse link
central nervous system projection neuron axonogenesis term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Bhlhe22 basic helix-loop-helix family, member e22 acts_upstream_of_or_within ISO MGI:2684610|MGI:4440742|MGI:4440744 (PMID:22284184) RGD PMID:22284184 NCBI chr 2:100,486,400...100,489,510 JBrowse link
G Chrnb2 cholinergic receptor nicotinic beta 2 subunit acts_upstream_of_or_within ISO MGI:1926253|MGI:2158714 (PMID:11344259), (PMID:14687550), (PMID:15608630) RGD PMID:11344259 PMID:14687550 PMID:15608630 NCBI chr 2:175,181,402...175,189,619 JBrowse link
G Dclk1 doublecortin-like kinase 1 involved_in
acts_upstream_of_or_within
IEA
ISO
GO_REF:0000107
MGI:1277171 (PMID:16387638)
Ensembl
RGD
PMID:16387638 GO_REF:0000107 NCBI chr 2:141,567,215...141,861,088 JBrowse link
G Dcx doublecortin involved_in
acts_upstream_of_or_within
IEA
ISO
GO_REF:0000107
MGI:1330861 (PMID:16387638)
Ensembl
RGD
PMID:16387638 GO_REF:0000107 NCBI chr  X:107,430,767...107,573,612 JBrowse link
G Ephb1 Eph receptor B1 involved_in
acts_upstream_of_or_within
ISS
ISO
GO_REF:0000024
MGI:2677305|MGI:2677312 (PMID:12971893)
UniProt
RGD
PMID:12971893 GO_REF:0000024 NCBI chr 8:111,386,432...111,823,759 JBrowse link
G Ephb2 Eph receptor B2 acts_upstream_of_or_within ISO (PMID:12971893) RGD PMID:12971893 NCBI chr 5:154,179,065...154,360,459 JBrowse link
G Ephb3 Eph receptor B3 acts_upstream_of_or_within ISO (PMID:12971893) RGD PMID:12971893 NCBI chr11:93,345,098...93,363,775 JBrowse link
G Kifbp kinesin family binding protein involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr20:30,512,899...30,532,504 JBrowse link
G Mycbp2 MYC binding protein 2 acts_upstream_of_or_within
involved_in
ISO MGI:3777464|MGI:3777465 (PMID:18031680)
(PMID:17901218)
RGD PMID:17901218 PMID:18031680 NCBI chr15:86,352,061...86,590,126 JBrowse link
G Nr4a2 nuclear receptor subfamily 4, group A, member 2 involved_in
acts_upstream_of_or_within
IEA
ISO
GO_REF:0000107
MGI:2157566 (PMID:10585298)
Ensembl
RGD
PMID:10585298 GO_REF:0000107 NCBI chr 3:41,689,847...41,707,036 JBrowse link
G Prdm8 PR/SET domain 8 acts_upstream_of_or_within ISO MGI:5315763 (PMID:22284184) RGD PMID:22284184 NCBI chr14:11,403,202...11,424,059 JBrowse link
G Sptbn4 spectrin, beta, non-erythrocytic 4 involved_in
acts_upstream_of_or_within
IBA
ISO
GO_REF:0000033
MGI:3710201 (PMID:17197442)
GO_Central
RGD
PMID:17197442 GO_REF:0000033 NCBI chr 1:82,650,750...82,738,345 JBrowse link
central nervous system segmentation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Zic2 Zic family member 2 involved_in ISO MGI:106676 (PMID:17490632) RGD PMID:17490632 NCBI chr15:99,576,697...99,581,522 JBrowse link
G Zic3 Zic family member 3 involved_in ISO MGI:106679 (PMID:17490632) RGD PMID:17490632 NCBI chr  X:136,123,662...136,129,627 JBrowse link
cerebellar cortex development term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Agtr2 angiotensin II receptor, type 2 IMP RGD PMID:19682991 RGD:6903898 NCBI chr  X:116,914,320...116,918,504 JBrowse link
G Cdk5 cyclin-dependent kinase 5 acts_upstream_of_or_within ISO MGI:1861809 (PMID:8855328) RGD PMID:8855328 NCBI chr 4:11,647,098...11,651,606 JBrowse link
G Clp1 cleavage factor polyribonucleotide kinase subunit 1 involved_in ISO
ISS
(PMID:24766809), (PMID:24766810)
GO_REF:0000024
RGD
UniProt
PMID:24766809 PMID:24766810 GO_REF:0000024 NCBI chr 3:90,213,461...90,217,165 JBrowse link
G Dixdc1 DIX domain containing 1 IMP RGD PMID:19339625 RGD:2308917 NCBI chr 8:59,904,218...59,977,595 JBrowse link
G Ezh2 enhancer of zeste 2 polycomb repressive complex 2 subunit acts_upstream_of_or_within ISO MGI:2661097 (PMID:20798045) RGD PMID:20798045 NCBI chr 4:76,624,399...76,687,362 JBrowse link
G Fktn fukutin acts_upstream_of_or_within ISO (PMID:29360985) RGD PMID:29360985 NCBI chr 5:68,339,803...68,396,412 JBrowse link
G Kif14 kinesin family member 14 involved_in ISO (PMID:23308235) RGD PMID:23308235 NCBI chr13:50,478,646...50,542,256 JBrowse link
G Neurod2 neuronal differentiation 2 involved_in ISS
ISO
IEA
GO_REF:0000024
(PMID:16504944)
GO_REF:0000107
UniProt
RGD
Ensembl
PMID:16504944 GO_REF:0000024 GO_REF:0000107 NCBI chr10:83,323,801...83,327,986 JBrowse link
G Ogdh oxoglutarate dehydrogenase involved_in IEA
ISO
GO_REF:0000107
(PMID:16901643)
Ensembl
RGD
PMID:16901643 GO_REF:0000107 NCBI chr14:81,150,021...81,217,479 JBrowse link
cerebellar cortex formation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Cdk5 cyclin-dependent kinase 5 involved_in
acts_upstream_of_or_within
IEA
ISO
GO_REF:0000107
MGI:1861809 (PMID:10407039)
Ensembl
RGD
PMID:10407039 GO_REF:0000107 NCBI chr 4:11,647,098...11,651,606 JBrowse link
G Map2k1 mitogen activated protein kinase kinase 1 involved_in
acts_upstream_of_or_within
IEA
ISO
GO_REF:0000107
MGI:99511 (PMID:24431450)
Ensembl
RGD
PMID:24431450 GO_REF:0000107 NCBI chr 8:73,578,747...73,650,184 JBrowse link
G Ptpn11 protein tyrosine phosphatase, non-receptor type 11 involved_in
acts_upstream_of_or_within
IEA
ISO
GO_REF:0000107
MGI:1346866|MGI:4868451 (PMID:24431450)
Ensembl
RGD
PMID:24431450 GO_REF:0000107 NCBI chr12:41,026,079...41,085,577 JBrowse link
cerebellar cortex morphogenesis term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Comt catechol-O-methyltransferase acts_upstream_of_or_within ISO MGI:2178542 (PMID:28556830) RGD PMID:28556830 NCBI chr11:96,072,371...96,091,956 JBrowse link
G Gli1 GLI family zinc finger 1 acts_upstream_of_or_within ISO MGI:95728 (PMID:16571625) RGD PMID:16571625 NCBI chr 7:65,042,237...65,054,888 JBrowse link
G Gli2 GLI family zinc finger 2 acts_upstream_of_or_within ISO MGI:2446434|MGI:3664541|MGI:95727 (PMID:16571625) RGD PMID:16571625 NCBI chr13:29,946,882...30,163,589 JBrowse link
G Nfix nuclear factor I X acts_upstream_of_or_within ISO MGI:3802571 (PMID:30503862) RGD PMID:30503862 NCBI chr19:23,355,388...23,450,360 JBrowse link
G Pcnt pericentrin acts_upstream_of_or_within ISO MGI:3799303 (PMID:20096683) RGD PMID:20096683 NCBI chr20:12,190,597...12,278,723 JBrowse link
G Smo smoothened, frizzled class receptor involved_in
acts_upstream_of_or_within
IEA
ISO
GO_REF:0000107
MGI:2176173|MGI:2176256 (PMID:16571625)
Ensembl
RGD
PMID:16571625 GO_REF:0000107 NCBI chr 4:59,311,084...59,341,280 JBrowse link
G Trnp1 TMF1-regulated nuclear protein 1 involved_in ISO (PMID:23622239) RGD PMID:23622239 NCBI chr 5:150,990,312...150,997,148 JBrowse link
G Tuba1a tubulin, alpha 1A involved_in ISO MGI:3617352 (PMID:17218254) RGD PMID:17218254 NCBI chr 7:131,992,151...131,996,850 JBrowse link
cerebellar cortex structural organization term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Usp9x ubiquitin specific peptidase 9, X-linked acts_upstream_of_or_within ISO MGI:5438072 (PMID:23861879) RGD PMID:23861879 NCBI chr  X:9,588,825...9,726,993 JBrowse link
cerebellar granular layer development term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Faim2 Fas apoptotic inhibitory molecule 2 involved_in ISS
IEA
ISO
GO_REF:0000024
GO_REF:0000107
(PMID:21957071)
UniProt
Ensembl
RGD
PMID:21957071 GO_REF:0000024 GO_REF:0000107 NCBI chr 7:130,632,368...130,659,353 JBrowse link
G Mdk midkine involved_in IEA
ISO
GO_REF:0000107
(PMID:10096022)
Ensembl
RGD
PMID:10096022 GO_REF:0000107 NCBI chr 3:77,901,134...77,903,997 JBrowse link
G Ttbk2 tau tubulin kinase 2 involved_in ISO (PMID:26323690) RGD PMID:26323690 NCBI chr 3:128,144,851...128,256,630 JBrowse link
cerebellar granular layer maturation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Cend1 cell cycle exit and neuronal differentiation 1 involved_in
acts_upstream_of_or_within
IBA
ISO
GO_REF:0000033
MGI:4831137 (PMID:20153830)
GO_Central
RGD
PMID:20153830 GO_REF:0000033 NCBI chr 1:205,954,713...205,957,710 JBrowse link
cerebellar granular layer morphogenesis term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Serpine2 serpin family E member 2 involved_in
acts_upstream_of_or_within
IEA
ISO
GO_REF:0000107
MGI:2387774 (PMID:17409116)
Ensembl
RGD
PMID:17409116 GO_REF:0000107 NCBI chr 9:81,124,746...81,188,866 JBrowse link
cerebellar granular layer structural organization term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Kif14 kinesin family member 14 involved_in ISO (PMID:23308235) RGD PMID:23308235 NCBI chr13:50,478,646...50,542,256 JBrowse link
cerebellar granule cell differentiation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Atp2b2 ATPase plasma membrane Ca2+ transporting 2 acts_upstream_of_or_within ISO MGI:1857876 (PMID:9668038) RGD PMID:9668038 NCBI chr 4:146,894,602...147,208,060 JBrowse link
G Cbln1 cerebellin 1 precursor involved_in ISS
ISO
GO_REF:0000024
UniProtKB:Q61625 (PMID:20537373)
BHF-UCL
RGD
PMID:20537373 GO_REF:0000024 NCBI chr19:19,608,763...19,612,572 JBrowse link
G Grid2 glutamate ionotropic receptor delta type subunit 2 involved_in ISS
ISO
GO_REF:0000024
UniProtKB:Q9R171 (PMID:20537373)
BHF-UCL
RGD
PMID:20537373 GO_REF:0000024 NCBI chr 4:92,415,019...93,892,472 JBrowse link
G Kndc1 kinase non-catalytic C-lobe domain containing 1 acts_upstream_of_or_within ISO (PMID:17984326) RGD PMID:17984326 NCBI chr 1:194,689,962...194,738,353 JBrowse link
G Mtpn myotrophin IEP RGD PMID:8144589 RGD:632797 NCBI chr 4:64,159,273...64,186,686 JBrowse link
G Nfix nuclear factor I X involved_in
acts_upstream_of_or_within
ISO MGI:3802571 (PMID:23042739)
MGI:3802571 (PMID:21800304)
RGD PMID:21800304 PMID:23042739 NCBI chr19:23,355,388...23,450,360 JBrowse link
G Nrxn1 neurexin 1 involved_in ISS
ISO
GO_REF:0000024
UniProtKB:Q61625|UniProtKB:Q9R171 (PMID:20537373)
BHF-UCL
RGD
PMID:20537373 GO_REF:0000024 NCBI chr 6:3,177,788...4,323,848 JBrowse link
G Ophn1 oligophrenin 1 involved_in ISO (PMID:27160703) RGD PMID:27160703 NCBI chr  X:63,599,746...63,976,678 JBrowse link
G Prox1 prospero homeobox 1 involved_in ISO (PMID:20808958) RGD PMID:20808958 NCBI chr13:104,196,615...104,251,007 JBrowse link
G Top2a DNA topoisomerase II alpha IEP RGD PMID:11170002 RGD:8693630 NCBI chr10:84,441,954...84,473,093 JBrowse link
G Ulk1 unc-51 like autophagy activating kinase 1 acts_upstream_of_or_within ISO (PMID:10624947) RGD PMID:10624947 NCBI chr12:51,511,492...51,537,746 JBrowse link
G Wnt7a Wnt family member 7A acts_upstream_of_or_within ISO (PMID:9405095) RGD PMID:9405095 NCBI chr 4:123,863,108...123,908,981 JBrowse link
cerebellar granule cell precursor proliferation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Atf5 activating transcription factor 5 involved_in IEA
ISO
ISS
GO_REF:0000107
(PMID:22095825)
GO_REF:0000024
Ensembl
RGD
UniProt
PMID:22095825 GO_REF:0000024 GO_REF:0000107 NCBI chr 1:104,432,094...104,437,611 JBrowse link
G Egf epidermal growth factor acts_upstream_of ISO (PMID:10027293) RGD PMID:10027293 NCBI chr 2:220,893,660...220,976,331 JBrowse link
G Fgf2 fibroblast growth factor 2 acts_upstream_of ISO (PMID:10027293) RGD PMID:10027293 NCBI chr 2:122,164,454...122,218,796 JBrowse link
G Gbx2 gastrulation brain homeobox 2 acts_upstream_of_or_within ISO MGI:1857634 (PMID:16651541) RGD PMID:16651541 NCBI chr 9:90,509,633...90,512,212 JBrowse link
G Igf1 insulin-like growth factor 1 acts_upstream_of ISO (PMID:10027293) RGD PMID:10027293 NCBI chr 7:24,169,608...24,249,446 JBrowse link
G Psmg1 proteasome assembly chaperone 1 acts_upstream_of_or_within ISO MGI:4820730 (PMID:20498273) RGD PMID:20498273 NCBI chr11:35,276,080...35,285,541 JBrowse link
G Rere arginine-glutamic acid dipeptide repeats acts_upstream_of_or_within ISO MGI:3577419 (PMID:24466353) RGD PMID:24466353 NCBI chr 5:160,765,855...161,097,678 JBrowse link
G Rora RAR-related orphan receptor A involved_in ISO UniProtKB:Q62226 (PMID:14687547) RGD PMID:14687547 NCBI chr 8:78,182,710...78,915,730 JBrowse link
G Shh sonic hedgehog signaling molecule involved_in
acts_upstream_of
ISS
ISO
IEA
GO_REF:0000024
UniProtKB:P51448 (PMID:14687547), (PMID:22095825)
(PMID:10027293)
GO_REF:0000107
UniProt
RGD
Ensembl
PMID:10027293 PMID:14687547 PMID:22095825 GO_REF:0000024 GO_REF:0000107 NCBI chr 4:6,954,017...6,963,170 JBrowse link
G Zfp423 zinc finger protein 423 involved_in
acts_upstream_of_or_within
IEA
ISO
GO_REF:0000107
(PMID:27727273)
Ensembl
RGD
PMID:27727273 GO_REF:0000107 NCBI chr19:35,282,149...35,580,775 JBrowse link
cerebellar granule cell precursor tangential migration term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Plxna2 plexin A2 acts_upstream_of_or_within ISO MGI:3793763|MGI:3793765 (PMID:18327254) RGD PMID:18327254 NCBI chr13:106,163,103...106,358,979 JBrowse link
G Ttbk2 tau tubulin kinase 2 involved_in ISO (PMID:26323690) RGD PMID:26323690 NCBI chr 3:128,144,851...128,256,630 JBrowse link
cerebellar molecular layer development term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Cacna1a calcium voltage-gated channel subunit alpha1 A acts_upstream_of_or_within ISO MGI:1856209|MGI:1856210 (PMID:7697385) RGD PMID:7697385 NCBI chr19:40,425,560...40,724,810 JBrowse link
cerebellar molecular layer formation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Dll1 delta like canonical Notch ligand 1 involved_in IEA
ISO
ISS
GO_REF:0000107
(PMID:23688253)
GO_REF:0000024
Ensembl
RGD
UniProt
PMID:23688253 GO_REF:0000024 GO_REF:0000107 NCBI chr 1:64,985,161...64,993,274 JBrowse link
cerebellar molecular layer morphogenesis term browser