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Pathways

ONTOLOGY REPORT - ANNOTATIONS


Term:synapse assembly
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Accession:GO:0007416 term browser browse the term
Definition:The aggregation, arrangement and bonding together of a set of components to form a synapse. This process ends when the synapse is mature (functional).
Synonyms:exact_synonym: synapse biogenesis;   synaptogenesis
 xref: Wikipedia:Synaptogenesis



show annotations for term's descendants           Sort by:
synapse assembly term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ache acetylcholinesterase IMP RGD PMID:12799140 RGD:1299197 NCBI chr12:25,042,882...25,050,608
Ensembl chr12:25,043,461...25,050,410
JBrowse link
G Add2 adducin 2 involved_in IEA
ISO
GO_REF:0000107
(PMID:21435558)
Ensembl
RGD
PMID:21435558 GO_REF:0000107 NCBI chr 4:120,001,977...120,101,090
Ensembl chr 4:120,002,054...120,101,091
JBrowse link
G Adgrf1 adhesion G protein-coupled receptor F1 involved_in
acts_upstream_of_or_within
IBA
ISO
GO_REF:0000033
MGI:4362398 (PMID:27759003)
GO_Central
RGD
PMID:27759003 GO_REF:0000033 NCBI chr 9:25,158,198...25,210,744
Ensembl chr 9:25,147,588...25,208,916
JBrowse link
G Adgrl3 adhesion G protein-coupled receptor L3 involved_in ISS
ISO
IBA
GO_REF:0000024
(PMID:38233523)
(PMID:30792275)
(PMID:22405201)
GO_REF:0000033
UniProt
RGD
GO_Central
PMID:22405201 PMID:30792275 PMID:38233523 GO_REF:0000024 GO_REF:0000033 NCBI chr14:26,690,891...27,458,132
Ensembl chr14:26,722,194...27,280,418
JBrowse link
G Agrn agrin IMP RGD PMID:12486121 RGD:1578367 NCBI chr 5:172,031,528...172,064,429
Ensembl chr 5:172,031,528...172,064,539
JBrowse link
G Akap5 A-kinase anchoring protein 5 involved_in ISO (PMID:22623657) RGD PMID:22623657 NCBI chr 6:100,787,169...100,796,712
Ensembl chr 6:100,790,148...100,796,620
JBrowse link
G Bdnf brain-derived neurotrophic factor involved_in ISO
IEA
(PMID:19036963)
GO_REF:0000107
RGD
Ensembl
PMID:19036963 GO_REF:0000107 NCBI chr 3:116,619,633...116,670,212
Ensembl chr 3:116,619,633...116,670,657
JBrowse link
G Cacna1a calcium voltage-gated channel subunit alpha1 A acts_upstream_of_or_within ISO MGI:1856211|MGI:2181384 (PMID:10336181), (PMID:14973254) RGD PMID:10336181 PMID:14973254 NCBI chr19:40,425,560...40,724,810
Ensembl chr19:40,425,560...40,724,599
JBrowse link
G Cadm1 cell adhesion molecule 1 acts_upstream_of_or_within
involved_in
ISO (PMID:12202822)
(PMID:21145003)
RGD PMID:12202822 PMID:21145003 NCBI chr 8:56,744,374...57,075,264
Ensembl chr 8:56,744,372...57,080,192
JBrowse link
G Caprin1 cell cycle associated protein 1 acts_upstream_of_or_within IEA
ISO
GO_REF:0000107
MGI:4838547 (PMID:20861386)
Ensembl
RGD
PMID:20861386 GO_REF:0000107 NCBI chr 3:110,606,489...110,685,408
Ensembl chr 3:110,606,489...110,685,562
JBrowse link
G Cbln1 cerebellin 1 precursor acts_upstream_of IEA GO_REF:0000107 Ensembl GO_REF:0000107 NCBI chr19:35,782,151...35,785,960
Ensembl chr19:35,781,952...35,785,960
JBrowse link
G Cbln2 cerebellin 2 precursor acts_upstream_of IEA GO_REF:0000107 Ensembl GO_REF:0000107 NCBI chr18:82,215,210...82,222,648
Ensembl chr18:82,215,220...82,222,648
JBrowse link
G Cdh1 cadherin 1 involved_in IMP
IEA
IBA
GO_REF:0000117
GO_REF:0000033
UniProt
GO_Central
RGD
PMID:12123610 GO_REF:0000033 GO_REF:0000117, RGD:632466 NCBI chr19:51,402,178...51,471,572
Ensembl chr19:51,402,034...51,471,565
JBrowse link
G Cdh13 cadherin 13 involved_in IEA GO_REF:0000117 UniProt GO_REF:0000117 NCBI chr19:63,258,251...64,296,122
Ensembl chr19:63,258,122...64,296,119
JBrowse link
G Cdh15 cadherin 15 involved_in IEA GO_REF:0000117 UniProt GO_REF:0000117 NCBI chr19:67,812,169...67,834,986
Ensembl chr19:67,812,164...67,834,985
JBrowse link
G Cdh2 cadherin 2 involved_in IMP
IEA
IBA
GO_REF:0000117
GO_REF:0000033
UniProt
GO_Central
RGD
PMID:12125071 GO_REF:0000033 GO_REF:0000117, RGD:632477 NCBI chr18:8,051,097...8,265,288
Ensembl chr18:8,051,097...8,265,288
JBrowse link
G Cdh3 cadherin 3 involved_in IEA GO_REF:0000117 UniProt GO_REF:0000117 NCBI chr19:51,303,414...51,353,900
Ensembl chr19:51,300,083...51,354,257
JBrowse link
G Cdh9 cadherin 9 involved_in IMP
ISO
PMID:21867881
(PMID:21867881)
RGD PMID:21867881 PMID:21867881 RGD:13432233 NCBI chr 2:67,954,708...68,094,371
Ensembl chr 2:67,955,166...68,094,365
JBrowse link
G Cdk5 cyclin-dependent kinase 5 acts_upstream_of_or_within IEA
ISO
GO_REF:0000107
(PMID:18054859)
Ensembl
RGD
PMID:18054859 GO_REF:0000107 NCBI chr 4:11,647,098...11,651,606
Ensembl chr 4:11,647,141...11,652,777
JBrowse link
G Clstn3 calsyntenin 3 acts_upstream_of_or_within IEA
ISO
GO_REF:0000107
MGI:5521290 (PMID:24094106)
Ensembl
RGD
PMID:24094106 GO_REF:0000107 NCBI chr 4:159,017,795...159,051,069
Ensembl chr 4:159,017,795...159,051,069
JBrowse link
G Dag1 dystroglycan 1 involved_in ISO (PMID:22553019) RGD PMID:22553019 NCBI chr 8:117,769,517...117,834,347
Ensembl chr 8:117,769,517...117,782,199
JBrowse link
G Dbnl drebrin-like involved_in ISS
ISO
IEA
GO_REF:0000024
(PMID:18829961)
GO_REF:0000107
UniProt
RGD
Ensembl
PMID:18829961 GO_REF:0000024 GO_REF:0000107 NCBI chr14:84,880,085...84,895,122
Ensembl chr14:84,880,142...84,897,133
JBrowse link
G Dnm3 dynamin 3 involved_in IDA PMID:15741233 UniProt PMID:15741233 RGD:8554738 NCBI chr13:76,892,381...77,371,346
Ensembl chr13:76,892,171...77,371,350
JBrowse link
G Drd1 dopamine receptor D1 involved_in IEP PMID:10051231 BHF-UCL PMID:10051231 RGD:8554073 NCBI chr17:10,545,488...10,550,029
Ensembl chr17:10,545,111...10,567,166
JBrowse link
G Drd2 dopamine receptor D2 involved_in IEP PMID:10051231 BHF-UCL PMID:10051231 RGD:8554073 NCBI chr 8:58,605,403...58,669,339
Ensembl chr 8:58,605,403...58,669,339
JBrowse link
G Dsc1 desmocollin 1 involved_in IEA GO_REF:0000117 UniProt GO_REF:0000117 NCBI chr18:11,774,711...11,831,868
Ensembl chr18:11,775,010...11,803,522
JBrowse link
G Dsc2 desmocollin 2 involved_in IEA GO_REF:0000117 UniProt GO_REF:0000117 NCBI chr18:11,725,466...11,757,591
Ensembl chr18:11,725,466...11,757,466
JBrowse link
G Dsc3 desmocollin 3 involved_in IEA GO_REF:0000117 UniProt GO_REF:0000117 NCBI chr18:11,654,833...11,688,871
Ensembl chr18:11,653,832...11,688,871
JBrowse link
G Dscam DS cell adhesion molecule involved_in ISS GO_REF:0000024 UniProt GO_REF:0000024 NCBI chr11:49,391,385...49,976,861
Ensembl chr11:49,347,531...49,976,238
JBrowse link
G Egflam EGF-like, fibronectin type III and laminin G domains involved_in ISO (PMID:18641643) RGD PMID:18641643 NCBI chr 2:58,029,934...58,204,010
Ensembl chr 2:58,029,935...58,203,643
JBrowse link
G Elfn1 extracellular leucine-rich repeat and fibronectin type III domain containing 1 acts_upstream_of_or_within ISO (PMID:36179691) RGD PMID:36179691 NCBI chr12:19,773,911...19,839,375
Ensembl chr12:19,772,908...19,841,961
JBrowse link
G Erbb4 erb-b2 receptor tyrosine kinase 4 involved_in IEA
ISO
GO_REF:0000107
(PMID:20393464)
Ensembl
RGD
PMID:20393464 GO_REF:0000107 NCBI chr 9:76,973,386...78,045,633
Ensembl chr 9:76,973,227...78,045,772
JBrowse link
G Erc2 ELKS/RAB6-interacting/CAST family member 2 involved_in NAS PMID:12163476 UniProt PMID:12163476 RGD:1299401 NCBI chr16:2,819,399...3,680,258
Ensembl chr16:2,819,512...3,680,258
JBrowse link
G Farp1 FERM, ARH/RhoGEF and pleckstrin domain protein 1 involved_in IMP PMID:23209303 UniProt PMID:23209303 RGD:8554251 NCBI chr15:104,531,196...104,770,148
Ensembl chr15:104,531,813...104,770,147
JBrowse link
G Flrt3 fibronectin leucine rich transmembrane protein 3 involved_in ISS
ISO
IEA
GO_REF:0000024
(PMID:22405201)
GO_REF:0000107
UniProt
RGD
Ensembl
PMID:22405201 GO_REF:0000024 GO_REF:0000107 NCBI chr 3:148,448,115...148,461,458
Ensembl chr 3:148,439,354...148,461,650
JBrowse link
G Gja10 gap junction protein, alpha 10 acts_upstream_of_or_within IEA
ISO
GO_REF:0000107
MGI:3043946 (PMID:16820008)
Ensembl
RGD
PMID:16820008 GO_REF:0000107 NCBI chr 5:51,787,407...51,799,827
Ensembl chr 5:51,786,277...51,803,613
JBrowse link
G Glra2 glycine receptor, alpha 2 IEP RGD PMID:1645300 RGD:728718 NCBI chr  X:32,651,931...32,873,277
Ensembl chr  X:32,652,187...32,873,277
JBrowse link
G Gnpat glyceronephosphate O-acyltransferase acts_upstream_of_or_within ISO MGI:2670461 (PMID:19270340) RGD PMID:19270340 NCBI chr19:69,719,707...69,746,244
Ensembl chr19:69,719,394...69,746,244
JBrowse link
G Gphn gephyrin IEP RGD PMID:9130666 RGD:1599855 NCBI chr 6:102,687,405...103,216,679
Ensembl chr 6:102,687,423...103,216,674
JBrowse link
G Gpm6a glycoprotein m6a involved_in IDA PMID:19737934 UniProt PMID:19737934 RGD:8554345 NCBI chr16:43,374,385...43,706,461
Ensembl chr16:43,374,385...43,706,705
JBrowse link
G Gria1 glutamate ionotropic receptor AMPA type subunit 1 involved_in IEA
ISO
GO_REF:0000107
(PMID:22623657)
Ensembl
RGD
PMID:22623657 GO_REF:0000107 NCBI chr10:41,710,540...42,030,105
Ensembl chr10:41,711,080...42,030,309
JBrowse link
G Grm6 glutamate metabotropic receptor 6 acts_upstream_of_or_within IEA
ISO
GO_REF:0000107
(PMID:36179691)
Ensembl
RGD
PMID:36179691 GO_REF:0000107 NCBI chr10:35,669,003...35,683,729
Ensembl chr10:35,669,003...35,683,729
JBrowse link
G Kirrel3 kirre like nephrin family adhesion molecule 3 involved_in IBA
ISO
IEA
GO_REF:0000033
(PMID:26575286)
GO_REF:0000107
GO_Central
RGD
Ensembl
PMID:26575286 GO_REF:0000033 GO_REF:0000107 NCBI chr 8:41,123,692...41,663,528
Ensembl chr 8:41,123,878...41,664,147
JBrowse link
G Map1b microtubule-associated protein 1B IEP RGD PMID:17151949 RGD:2304009 NCBI chr 2:32,551,423...32,644,471
Ensembl chr 2:32,551,423...32,657,094
JBrowse link
G Mapt microtubule-associated protein tau involved_in ISO (PMID:26704708) RGD PMID:26704708 NCBI chr10:89,638,618...89,736,108
Ensembl chr10:89,638,599...89,736,108
JBrowse link
G Mecp2 methyl CpG binding protein 2 acts_upstream_of_or_within IEA
ISO
GO_REF:0000107
MGI:2137311|MGI:2183727 (PMID:17920015), (PMID:18295506)
Ensembl
RGD
PMID:17920015 PMID:18295506 GO_REF:0000107 NCBI chr  X:156,932,481...156,995,981
Ensembl chr  X:156,941,234...156,943,560
JBrowse link
G Myo6 myosin VI acts_upstream_of_or_within ISO MGI:1856555 (PMID:15657400) RGD PMID:15657400 NCBI chr 8:89,967,351...90,122,219
Ensembl chr 8:89,967,377...90,122,215
JBrowse link
G Nlgn1 neuroligin 1 involved_in IDA
ISO
IMP
NAS
ISS
PMID:15797875
(PMID:10892652)
PMID:37865312
PMID:16242404
GO_REF:0000024
RGD
UniProt
PMID:10892652 PMID:15797875 PMID:37865312 PMID:16242404 GO_REF:0000024, RGD:8554205, RGD:626467852, RGD:151356616 NCBI chr 2:110,184,987...111,110,316
Ensembl chr 2:110,186,573...110,909,984
JBrowse link
G Nlgn2 neuroligin 2 involved_in IDA
IMP
PMID:15797875
PMID:37865312
BHF-UCL
UniProt
PMID:15797875 PMID:37865312 RGD:8554205, RGD:626467852 NCBI chr10:55,042,175...55,056,578
Ensembl chr10:55,043,185...55,056,578
JBrowse link
G Nlgn3 neuroligin 3 involved_in IDA
ISO
PMID:15797875
(PMID:37865312)
RGD PMID:37865312 PMID:15797875 RGD:8554205 NCBI chr  X:70,469,251...70,497,380
Ensembl chr  X:70,469,457...70,497,379
JBrowse link
G Nrg1 neuregulin 1 acts_upstream_of_or_within ISO MGI:1928831 (PMID:10707974) RGD PMID:10707974 NCBI chr16:65,954,084...67,007,484
Ensembl chr16:65,953,865...66,999,849
JBrowse link
G Nrg3 neuregulin 3 involved_in IEA
ISO
GO_REF:0000107
(PMID:30049711)
Ensembl
RGD
PMID:30049711 GO_REF:0000107 NCBI chr16:14,256,540...15,374,107
Ensembl chr16:14,257,148...15,374,147
JBrowse link
G Nrxn1 neurexin 1 involved_in
acts_upstream_of_or_within
ISS
ISO
IEA
NAS
GO_REF:0000024
MGI:1096362|MGI:1096389 (PMID:12827191)
(PMID:31995730)
GO_REF:0000107
PMID:16242404
BHF-UCL
RGD
Ensembl
PMID:12827191 PMID:31995730 PMID:16242404 GO_REF:0000024 GO_REF:0000107, RGD:151356616 NCBI chr 6:8,931,360...10,077,381
Ensembl chr 6:8,935,523...10,077,374
JBrowse link
G Nrxn2 neurexin 2 involved_in
acts_upstream_of_or_within
ISS
ISO
GO_REF:0000024
MGI:1096389|MGI:1096391 (PMID:12827191)
BHF-UCL
RGD
PMID:12827191 GO_REF:0000024 NCBI chr 1:213,155,673...213,271,526
Ensembl chr 1:213,155,673...213,271,526
JBrowse link
G Nrxn3 neurexin 3 acts_upstream_of_or_within IEA
ISO
GO_REF:0000107
MGI:1096362|MGI:1096391 (PMID:12827191)
Ensembl
RGD
PMID:12827191 GO_REF:0000107 NCBI chr 6:113,372,667...115,004,073
Ensembl chr 6:113,443,524...115,002,540
JBrowse link
G Pdgfb platelet derived growth factor subunit B acts_upstream_of_or_within ISO MGI:2670574 (PMID:25224828) RGD PMID:25224828 NCBI chr 7:113,419,882...113,438,343
Ensembl chr 7:113,420,710...113,438,343
JBrowse link
G Plxna1 plexin A1 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr 4:123,295,165...123,340,132
Ensembl chr 4:123,297,244...123,340,428
JBrowse link
G Plxna2 plexin A2 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr13:108,683,155...108,888,336
Ensembl chr13:108,691,530...108,887,453
JBrowse link
G Plxna3 plexin A3 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr  X:157,266,986...157,282,896
Ensembl chr  X:157,267,107...157,282,891
JBrowse link
G Plxna4 plexin A4 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr 4:61,687,483...62,129,467
Ensembl chr 4:61,687,510...62,129,445
JBrowse link
G Plxnb1 plexin B1 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr 8:118,621,961...118,647,491
Ensembl chr 8:118,623,040...118,647,489
JBrowse link
G Plxnb2 plexin B2 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr 7:122,111,917...122,138,201
Ensembl chr 7:122,111,917...122,127,746
JBrowse link
G Plxnb3 plexin B3 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr  X:156,645,505...156,660,011
Ensembl chr  X:156,645,182...156,660,003
JBrowse link
G Plxnc1 plexin C1 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr 7:31,276,978...31,430,823
Ensembl chr 7:31,276,978...31,431,092
JBrowse link
G Plxnd1 plexin D1 involved_in IBA
ISO
IEA
GO_REF:0000033
(PMID:22179111)
GO_REF:0000107
GO_Central
RGD
Ensembl
PMID:22179111 GO_REF:0000033 GO_REF:0000107 NCBI chr 4:150,675,377...150,715,706
Ensembl chr 4:150,675,377...150,715,566
JBrowse link
G Pten phosphatase and tensin homolog involved_in ISO (PMID:16675393) RGD PMID:16675393 NCBI chr 1:240,043,707...240,110,330
Ensembl chr 1:240,043,707...240,110,330
JBrowse link
G Rab29 RAB29, member RAS oncogene family involved_in ISO
IEA
(PMID:26021297)
GO_REF:0000107
RGD
Ensembl
PMID:26021297 GO_REF:0000107 NCBI chr13:45,859,930...45,865,468
Ensembl chr13:45,859,961...45,865,610
JBrowse link
G Sdk1 sidekick cell adhesion molecule 1 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr12:17,491,430...18,477,914
Ensembl chr12:17,493,869...18,477,935
JBrowse link
G Sdk2 sidekick cell adhesion molecule 2 involved_in IBA
ISO
IEA
GO_REF:0000033
(PMID:26287463)
GO_REF:0000107
GO_Central
RGD
Ensembl
PMID:26287463 GO_REF:0000033 GO_REF:0000107 NCBI chr10:99,324,047...99,601,683
Ensembl chr10:99,324,047...99,601,683
JBrowse link
G Shank2 SH3 and multiple ankyrin repeat domains 2 involved_in ISS
ISO
GO_REF:0000024
(PMID:22699620)
BHF-UCL
RGD
PMID:22699620 GO_REF:0000024 NCBI chr 1:208,575,144...209,020,300
Ensembl chr 1:208,598,772...209,018,736
JBrowse link
G Shank3 SH3 and multiple ankyrin repeat domains 3 involved_in ISS
ISO
IEA
GO_REF:0000024
(PMID:21423165)
GO_REF:0000107
BHF-UCL
RGD
Ensembl
PMID:21423165 GO_REF:0000024 GO_REF:0000107 NCBI chr 7:122,448,323...122,518,623
Ensembl chr 7:122,448,323...122,510,410
JBrowse link
G Slc25a46 solute carrier family 25, member 46 acts_upstream_of_or_within IEA
ISO
GO_REF:0000107
MGI:6118180 (PMID:28376086)
Ensembl
RGD
PMID:28376086 GO_REF:0000107 NCBI chr18:23,490,422...23,519,599
Ensembl chr18:23,490,425...23,518,730
JBrowse link
G Slitrk1 SLIT and NTRK-like family, member 1 involved_in ISO (PMID:27273464) RGD PMID:27273464 NCBI chr15:92,137,703...92,141,741
Ensembl chr15:92,135,994...92,142,105
JBrowse link
G Slitrk6 SLIT and NTRK-like family, member 6 acts_upstream_of_or_within ISO
IEA
(PMID:23543054)
MGI:4417931 (PMID:23543054)
GO_REF:0000107
RGD
Ensembl
PMID:23543054 GO_REF:0000107 NCBI chr15:93,977,812...93,984,431
Ensembl chr15:93,969,038...93,984,526
JBrowse link
G Sptbn2 spectrin, beta, non-erythrocytic 2 acts_upstream_of_or_within IEA
ISO
GO_REF:0000107
MGI:4127354 (PMID:20231455)
Ensembl
RGD
PMID:20231455 GO_REF:0000107 NCBI chr 1:211,432,373...211,473,016
Ensembl chr 1:211,432,373...211,473,306
JBrowse link
G Traf6 TNF receptor associated factor 6 involved_in IDA
IMP
EXP
PMID:33363141 SynGO PMID:33363141 PMID:33363141 PMID:33363141 RGD:405650332, RGD:405650332, RGD:405650332 NCBI chr 3:108,418,537...108,443,330
Ensembl chr 3:108,418,513...108,443,328
JBrowse link
G Wnt7a Wnt family member 7A acts_upstream_of IEA GO_REF:0000107 Ensembl GO_REF:0000107 NCBI chr 4:125,420,276...125,466,149
Ensembl chr 4:125,420,276...125,466,149
JBrowse link
G Zdhhc2 zinc finger DHHC-type palmitoyltransferase 2 involved_in
acts_upstream_of_or_within
ISO
IEA
IBA
(PMID:25589740)
GO_REF:0000107
GO_REF:0000033
RGD
Ensembl
GO_Central
PMID:25589740 GO_REF:0000033 GO_REF:0000107 NCBI chr16:58,511,931...58,581,530
Ensembl chr16:58,511,934...58,581,516
JBrowse link
excitatory synapse assembly term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Adgrl2 adhesion G protein-coupled receptor L2 involved_in ISS
ISO
GO_REF:0000024
(PMID:28972101), (PMID:30792275)
UniProt
RGD
PMID:28972101 PMID:30792275 GO_REF:0000024 NCBI chr 2:240,356,176...240,987,246
Ensembl chr 2:240,356,177...240,855,933
JBrowse link
G Adgrl3 adhesion G protein-coupled receptor L3 involved_in ISS
ISO
GO_REF:0000024
(PMID:30792275)
UniProt
RGD
PMID:30792275 GO_REF:0000024 NCBI chr14:26,690,891...27,458,132
Ensembl chr14:26,722,194...27,280,418
JBrowse link
G Clstn3 calsyntenin 3 involved_in ISS
ISO
GO_REF:0000024
(PMID:24094106)
UniProt
RGD
PMID:24094106 GO_REF:0000024 NCBI chr 4:159,017,795...159,051,069
Ensembl chr 4:159,017,795...159,051,069
JBrowse link
G Cntnap2 contactin associated protein 2 involved_in ISO MGI:2677631 (PMID:23074245), (PMID:31141683) RGD PMID:23074245 PMID:31141683 NCBI chr 4:75,109,358...77,366,258
Ensembl chr 4:75,109,858...77,366,258
JBrowse link
G Grid2 glutamate ionotropic receptor delta type subunit 2 involved_in ISO
IEA
(PMID:27418511)
GO_REF:0000107
RGD
Ensembl
PMID:27418511 GO_REF:0000107 NCBI chr 4:93,745,165...95,222,354
Ensembl chr 4:93,745,277...95,219,868
JBrowse link
G Lrrc4 leucine rich repeat containing 4 involved_in
acts_upstream_of_or_within
IBA
ISO
IEA
GO_REF:0000033
(PMID:16980967)
GO_REF:0000107
GO_Central
RGD
Ensembl
PMID:16980967 GO_REF:0000033 GO_REF:0000107 NCBI chr 4:58,398,942...58,402,538
Ensembl chr 4:58,397,302...58,402,808
JBrowse link
G Nlgn1 neuroligin 1 involved_in ISO (PMID:22960622), (PMID:26440732) RGD PMID:22960622 PMID:26440732 NCBI chr 2:110,184,987...111,110,316
Ensembl chr 2:110,186,573...110,909,984
JBrowse link
G Nptn neuroplastin acts_upstream_of_or_within IEA
ISO
GO_REF:0000107
MGI:5621191 (PMID:24554721)
Ensembl
RGD
PMID:24554721 GO_REF:0000107 NCBI chr 8:67,892,678...67,959,231
Ensembl chr 8:67,892,702...67,959,236
JBrowse link
G Plxnb2 plexin B2 involved_in IEA
ISO
GO_REF:0000107
(PMID:29981480)
Ensembl
RGD
PMID:29981480 GO_REF:0000107 NCBI chr 7:122,111,917...122,138,201
Ensembl chr 7:122,111,917...122,127,746
JBrowse link
G Srgap2 SLIT-ROBO Rho GTPase activating protein 2 involved_in ISO
IEA
(PMID:27373832)
GO_REF:0000107
RGD
Ensembl
PMID:27373832 GO_REF:0000107 NCBI chr13:45,298,192...45,519,330
Ensembl chr13:45,298,192...45,519,330
JBrowse link
gephyrin clustering involved in postsynaptic density assembly term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Nlgn2 neuroligin 2 involved_in
acts_upstream_of_or_within
ISS
ISO
IEA
GO_REF:0000024
(PMID:15620359)
MGI:2679447 (PMID:29107521)
GO_REF:0000107
BHF-UCL
RGD
Ensembl
PMID:15620359 PMID:29107521 GO_REF:0000024 GO_REF:0000107 NCBI chr10:55,042,175...55,056,578
Ensembl chr10:55,043,185...55,056,578
JBrowse link
G Nrxn1 neurexin 1 involved_in ISS
ISO
IEA
GO_REF:0000024
(PMID:15620359)
(PMID:21424692)
GO_REF:0000107
BHF-UCL
RGD
Ensembl
PMID:15620359 PMID:21424692 GO_REF:0000024 GO_REF:0000107 NCBI chr 6:8,931,360...10,077,381
Ensembl chr 6:8,935,523...10,077,374
JBrowse link
G Nrxn2 neurexin 2 involved_in ISS
ISO
GO_REF:0000024
(PMID:21424692)
BHF-UCL
RGD
PMID:21424692 GO_REF:0000024 NCBI chr 1:213,155,673...213,271,526
Ensembl chr 1:213,155,673...213,271,526
JBrowse link
G Slitrk3 SLIT and NTRK-like family, member 3 acts_upstream_of_or_within ISO MGI:2681835 (PMID:29107521)
MGI:6119690 (PMID:29107521)
RGD PMID:29107521 NCBI chr 2:159,983,650...159,996,194
Ensembl chr 2:159,973,029...159,996,342
JBrowse link
G Zdhhc12 zinc finger DHHC-type palmitoyltransferase 12 involved_in ISS
ISO
IEA
GO_REF:0000024
(PMID:25025157)
GO_REF:0000107
UniProt
RGD
Ensembl
PMID:25025157 GO_REF:0000024 GO_REF:0000107 NCBI chr 3:33,761,338...33,764,207
Ensembl chr 3:33,761,353...33,764,323
JBrowse link
inhibitory synapse assembly term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Cbln4 cerebellin 4 precursor involved_in IEA
ISO
GO_REF:0000107
(PMID:25534236), (PMID:30679375)
Ensembl
RGD
PMID:25534236 PMID:30679375 GO_REF:0000107 NCBI chr 3:181,218,046...181,225,600
Ensembl chr 3:181,218,046...181,225,600
JBrowse link
G Clstn2 calsyntenin 2 involved_in IEA
ISO
GO_REF:0000107
(PMID:26171716)
Ensembl
RGD
PMID:26171716 GO_REF:0000107 NCBI chr 8:106,899,894...107,516,402
Ensembl chr 8:106,899,894...107,040,053
JBrowse link
G Clstn3 calsyntenin 3 involved_in ISS
ISO
GO_REF:0000024
(PMID:24094106)
UniProt
RGD
PMID:24094106 GO_REF:0000024 NCBI chr 4:159,017,795...159,051,069
Ensembl chr 4:159,017,795...159,051,069
JBrowse link
G Cntnap2 contactin associated protein 2 involved_in ISO MGI:2677631 (PMID:23074245), (PMID:31141683) RGD PMID:23074245 PMID:31141683 NCBI chr 4:75,109,358...77,366,258
Ensembl chr 4:75,109,858...77,366,258
JBrowse link
G Dag1 dystroglycan 1 involved_in ISO (PMID:40473926) RGD PMID:40473926 NCBI chr 8:117,769,517...117,834,347
Ensembl chr 8:117,769,517...117,782,199
JBrowse link
G Fgf13 fibroblast growth factor 13 involved_in ISS
ISO
IEA
GO_REF:0000024
(PMID:30679375)
GO_REF:0000107
UniProt
RGD
Ensembl
PMID:30679375 GO_REF:0000024 GO_REF:0000107 NCBI chr  X:142,312,381...142,838,581
Ensembl chr  X:142,312,391...142,423,536
JBrowse link
G Gabra1 gamma-aminobutyric acid type A receptor subunit alpha 1 involved_in ISS
ISO
IBA
IEA
GO_REF:0000024
(PMID:27129275)
GO_REF:0000033
GO_REF:0000107
(PMID:23909897), (PMID:25489750)
UniProt
RGD
GO_Central
Ensembl
PMID:23909897 PMID:25489750 PMID:27129275 GO_REF:0000024 GO_REF:0000033 GO_REF:0000107 NCBI chr10:27,096,731...27,152,563
Ensembl chr10:27,096,740...27,152,442
JBrowse link
G Gabra2 gamma-aminobutyric acid type A receptor subunit alpha 2 involved_in ISS
ISO
IBA
GO_REF:0000024
(PMID:27129275)
GO_REF:0000033
UniProt
RGD
GO_Central
PMID:27129275 GO_REF:0000024 GO_REF:0000033 NCBI chr14:37,451,218...37,587,458
Ensembl chr14:37,450,683...37,587,457
JBrowse link
G Gabra3 gamma-aminobutyric acid type A receptor subunit alpha 3 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr  X:155,301,979...155,543,870
Ensembl chr  X:155,303,928...155,543,863
JBrowse link
G Gabra4 gamma-aminobutyric acid type A receptor subunit alpha 4 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr14:36,944,747...37,021,652
Ensembl chr14:36,944,388...37,021,648
JBrowse link
G Gabra5 gamma-aminobutyric acid type A receptor subunit alpha 5 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr 1:117,404,446...117,517,424
Ensembl chr 1:117,404,494...117,516,635
JBrowse link
G Gabra6 gamma-aminobutyric acid type A receptor subunit alpha6 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr10:27,311,965...27,327,337
Ensembl chr10:27,311,979...27,327,234
JBrowse link
G Gabrb2 gamma-aminobutyric acid type A receptor subunit beta 2 involved_in ISO
IEA
ISS
(PMID:23909897), (PMID:25489750)
(PMID:27129275)
GO_REF:0000117
GO_REF:0000107
GO_REF:0000024
RGD
UniProt
Ensembl
PMID:23909897 PMID:25489750 PMID:27129275 GO_REF:0000024 GO_REF:0000107 GO_REF:0000117 NCBI chr10:27,438,127...27,657,680
Ensembl chr10:27,438,238...27,655,171
JBrowse link
G Gabrb3 gamma-aminobutyric acid type A receptor subunit beta 3 involved_in ISO
ISS
(PMID:25489750)
(PMID:27129275)
GO_REF:0000024
RGD
UniProt
PMID:25489750 PMID:27129275 GO_REF:0000024 NCBI chr 1:117,602,772...117,838,230
Ensembl chr 1:117,431,842...117,836,725
JBrowse link
G Gabre gamma-aminobutyric acid type A receptor subunit epsilon involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr  X:155,102,078...155,120,821
Ensembl chr  X:155,102,083...155,120,735
JBrowse link
G Gabrg1 gamma-aminobutyric acid type A receptor subunit gamma 1 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr14:37,750,292...37,821,651
Ensembl chr14:37,750,292...37,989,945
JBrowse link
G Gabrg2 gamma-aminobutyric acid type A receptor subunit gamma 2 involved_in IEA
ISO
IBA
ISS
GO_REF:0000107
(PMID:27129275)
GO_REF:0000033
GO_REF:0000024
(PMID:23909897), (PMID:25489750)
Ensembl
RGD
GO_Central
UniProt
PMID:23909897 PMID:25489750 PMID:27129275 GO_REF:0000024 GO_REF:0000033 GO_REF:0000107 NCBI chr10:26,876,926...26,965,523
Ensembl chr10:26,876,926...26,965,523
JBrowse link
G Gabrg3 gamma-aminobutyric acid type A receptor subunit gamma 3 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr 1:116,763,332...117,386,770
Ensembl chr 1:116,763,129...117,382,536
JBrowse link
G Hapln4 hyaluronan and proteoglycan link protein 4 involved_in ISO (PMID:30125937) RGD PMID:30125937 NCBI chr16:19,367,041...19,375,173
Ensembl chr16:19,367,041...19,375,442
JBrowse link
G Lgi2 leucine-rich repeat LGI family, member 2 involved_in IBA
ISO
IEA
GO_REF:0000033
(PMID:30679375)
GO_REF:0000107
GO_Central
RGD
Ensembl
PMID:30679375 GO_REF:0000033 GO_REF:0000107 NCBI chr14:62,628,746...62,656,231
Ensembl chr14:62,596,150...62,656,188
JBrowse link
G Mdga1 MAM domain containing glycosylphosphatidylinositol anchor 1 acts_upstream_of_or_within ISO (PMID:23358245) RGD PMID:23358245 NCBI chr20:7,901,856...7,965,834
Ensembl chr20:7,901,856...7,965,834
JBrowse link
G Nlgn2 neuroligin 2 involved_in IEA
ISO
GO_REF:0000107
(PMID:22960622)
Ensembl
RGD
PMID:22960622 GO_REF:0000107 NCBI chr10:55,042,175...55,056,578
Ensembl chr10:55,043,185...55,056,578
JBrowse link
G Npas4 neuronal PAS domain protein 4 involved_in ISS
ISO
IEA
GO_REF:0000024
(PMID:18815592)
GO_REF:0000107
UniProt
RGD
Ensembl
PMID:18815592 GO_REF:0000024 GO_REF:0000107 NCBI chr 1:211,710,640...211,728,038
Ensembl chr 1:211,711,338...211,716,102
JBrowse link
G Plxnb1 plexin B1 involved_in IEA
ISO
GO_REF:0000107
(PMID:23699507), (PMID:29981480)
Ensembl
RGD
PMID:23699507 PMID:29981480 GO_REF:0000107 NCBI chr 8:118,621,961...118,647,491
Ensembl chr 8:118,623,040...118,647,489
JBrowse link
G Srgap2 SLIT-ROBO Rho GTPase activating protein 2 involved_in ISO
IEA
(PMID:27373832)
GO_REF:0000107
RGD
Ensembl
PMID:27373832 GO_REF:0000107 NCBI chr13:45,298,192...45,519,330
Ensembl chr13:45,298,192...45,519,330
JBrowse link
negative regulation of excitatory synapse assembly term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Clstn3 calsyntenin 3 involved_in ISS
ISO
GO_REF:0000024
(PMID:35420982)
UniProt
RGD
PMID:35420982 GO_REF:0000024 NCBI chr 4:159,017,795...159,051,069
Ensembl chr 4:159,017,795...159,051,069
JBrowse link
G Ptpn13 protein tyrosine phosphatase, non-receptor type 13 involved_in IDA
IBA
GO_REF:0000033 GO_Central
RGD
PMID:23769722 GO_REF:0000033, RGD:152975632 NCBI chr14:6,412,841...6,587,238
Ensembl chr14:6,412,841...6,587,171
JBrowse link
negative regulation of inhibitory synapse assembly term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Cbln1 cerebellin 1 precursor involved_in ISS
ISO
IEA
GO_REF:0000024
(PMID:24467251)
GO_REF:0000107
UniProt
RGD
Ensembl
PMID:24467251 GO_REF:0000024 GO_REF:0000107 NCBI chr19:35,782,151...35,785,960
Ensembl chr19:35,781,952...35,785,960
JBrowse link
negative regulation of presynapse assembly term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G App amyloid beta precursor protein acts_upstream_of_or_within ISO (PMID:30902970) RGD PMID:30902970 NCBI chr11:37,506,207...37,724,351
Ensembl chr11:37,506,408...37,722,971
JBrowse link
G Dkk1 dickkopf WNT signaling pathway inhibitor 1 involved_in IEA
ISO
GO_REF:0000107
(PMID:29643768)
Ensembl
RGD
PMID:29643768 GO_REF:0000107 NCBI chr 1:237,794,969...237,798,650
Ensembl chr 1:237,794,969...237,798,650
JBrowse link
negative regulation of synapse assembly term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Epha7 Eph receptor A7 involved_in IEA
ISO
GO_REF:0000107
(PMID:19036963)
Ensembl
RGD
PMID:19036963 GO_REF:0000107 NCBI chr 5:47,771,776...47,925,189
Ensembl chr 5:47,771,865...47,925,058
JBrowse link
G Mdga1 MAM domain containing glycosylphosphatidylinositol anchor 1 IDA RGD PMID:23358245 RGD:9743980 NCBI chr20:7,901,856...7,965,834
Ensembl chr20:7,901,856...7,965,834
JBrowse link
G Negr1 neuronal growth regulator 1 IDA RGD PMID:19711485 RGD:596948412 NCBI chr 2:248,283,164...249,015,538
Ensembl chr 2:248,283,353...249,018,410
JBrowse link
G Ptk2 protein tyrosine kinase 2 acts_upstream_of_or_within ISO MGI:1857596 (PMID:15378065) RGD PMID:15378065 NCBI chr 7:107,015,730...107,220,865
Ensembl chr 7:107,015,733...107,172,091
JBrowse link
G Rhoa ras homolog family member A IMP RGD PMID:27893610 RGD:243048440 NCBI chr 8:117,870,548...117,904,303
Ensembl chr 8:117,870,270...117,904,302
JBrowse link
G Robo1 roundabout guidance receptor 1 IMP RGD PMID:27893610 RGD:243048440 NCBI chr11:24,067,869...25,108,694
Ensembl chr11:24,067,878...25,108,694
JBrowse link
G Slit1 slit guidance ligand 1 involved_in ISS GO_REF:0000024 UniProt GO_REF:0000024 NCBI chr 1:250,358,917...250,507,476
Ensembl chr 1:250,358,919...250,507,476
JBrowse link
G Tlr2 toll-like receptor 2 involved_in ISO UniProtKB:P05067|UniProtKB:P49768 (PMID:22198949) RGD PMID:22198949 NCBI chr 2:171,499,189...171,504,831
Ensembl chr 2:171,497,060...171,520,194
JBrowse link
G Wnt5a Wnt family member 5A involved_in IEA
ISO
GO_REF:0000107
(PMID:18986540)
Ensembl
RGD
PMID:18986540 GO_REF:0000107 NCBI chr16:3,702,300...3,724,860
Ensembl chr16:3,703,665...3,724,860
JBrowse link
negative regulation of synaptic assembly at neuromuscular junction term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Gsk3b glycogen synthase kinase 3 beta involved_in IMP PMID:25764078 CACAO PMID:25764078 RGD:15023478 NCBI chr11:76,004,502...76,154,665
Ensembl chr11:76,009,507...76,153,249
JBrowse link
neurexin clustering involved in presynaptic membrane assembly term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Nlgn1 neuroligin 1 involved_in ISS
ISO
GO_REF:0000024
(PMID:12796785)
BHF-UCL
RGD
PMID:12796785 GO_REF:0000024 NCBI chr 2:110,184,987...111,110,316
Ensembl chr 2:110,186,573...110,909,984
JBrowse link
neuroligin clustering involved in postsynaptic membrane assembly term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Cdh2 cadherin 2 involved_in IEA
ISO
GO_REF:0000107
(PMID:20534458)
Ensembl
RGD
PMID:20534458 GO_REF:0000107 NCBI chr18:8,051,097...8,265,288
Ensembl chr18:8,051,097...8,265,288
JBrowse link
G Magi2 membrane associated guanylate kinase, WW and PDZ domain containing 2 involved_in ISO (PMID:20534458) RGD PMID:20534458 NCBI chr 4:15,278,518...16,762,427
Ensembl chr 4:15,278,518...16,762,199
JBrowse link
G Nrxn1 neurexin 1 involved_in ISS
ISO
IEA
GO_REF:0000024
(PMID:21424692)
(PMID:15620359)
GO_REF:0000107
BHF-UCL
RGD
Ensembl
PMID:15620359 PMID:21424692 GO_REF:0000024 GO_REF:0000107 NCBI chr 6:8,931,360...10,077,381
Ensembl chr 6:8,935,523...10,077,374
JBrowse link
G Nrxn2 neurexin 2 involved_in ISS
ISO
GO_REF:0000024
(PMID:21424692)
BHF-UCL
RGD
PMID:21424692 GO_REF:0000024 NCBI chr 1:213,155,673...213,271,526
Ensembl chr 1:213,155,673...213,271,526
JBrowse link
positive regulation of excitatory synapse assembly term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Sema4a semaphorin 4A involved_in IEA
ISO
GO_REF:0000107
(PMID:29981480)
Ensembl
RGD
PMID:29981480 GO_REF:0000107 NCBI chr 2:176,194,248...176,215,752
Ensembl chr 2:176,194,255...176,212,258
JBrowse link
G Vstm5 V-set and transmembrane domain containing 5 involved_in ISS
ISO
IBA
GO_REF:0000024
(PMID:27683913)
GO_REF:0000033
UniProt
RGD
GO_Central
PMID:27683913 GO_REF:0000024 GO_REF:0000033 NCBI chr 8:20,361,474...20,381,844
Ensembl chr 8:20,361,473...20,381,828
JBrowse link
G Wnt7a Wnt family member 7A involved_in ISO
IEA
(PMID:21670302)
GO_REF:0000107
RGD
Ensembl
PMID:21670302 GO_REF:0000107 NCBI chr 4:125,420,276...125,466,149
Ensembl chr 4:125,420,276...125,466,149
JBrowse link
positive regulation of inhibitory synapse assembly term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Clstn3 calsyntenin 3 involved_in ISS
ISO
GO_REF:0000024
(PMID:35420982)
UniProt
RGD
PMID:35420982 GO_REF:0000024 NCBI chr 4:159,017,795...159,051,069
Ensembl chr 4:159,017,795...159,051,069
JBrowse link
G Sema4a semaphorin 4A involved_in IEA
ISO
GO_REF:0000107
(PMID:29981480)
Ensembl
RGD
PMID:29981480 GO_REF:0000107 NCBI chr 2:176,194,248...176,215,752
Ensembl chr 2:176,194,255...176,212,258
JBrowse link
G Sema4d semaphorin 4D involved_in IEA
ISO
GO_REF:0000107
(PMID:23699507), (PMID:29981480)
Ensembl
RGD
PMID:23699507 PMID:29981480 GO_REF:0000107 NCBI chr17:13,582,085...13,688,889
Ensembl chr17:13,582,098...13,688,891
JBrowse link
positive regulation of presynapse assembly term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Efnb3 ephrin B3 IMP RGD PMID:17626212 RGD:152995392 NCBI chr10:54,773,282...54,780,727
Ensembl chr10:54,773,282...54,797,651
JBrowse link
positive regulation of presynaptic active zone assembly term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Nlgn1 neuroligin 1 involved_in IDA PMID:15797875 BHF-UCL PMID:15797875 RGD:8554205 NCBI chr 2:110,184,987...111,110,316
Ensembl chr 2:110,186,573...110,909,984
JBrowse link
G Nrxn1 neurexin 1 involved_in TAS PMID:15797875 BHF-UCL PMID:15797875 RGD:8554205 NCBI chr 6:8,931,360...10,077,381
Ensembl chr 6:8,935,523...10,077,374
JBrowse link
positive regulation of synapse assembly term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Actr3 actin related protein 3 IMP RGD PMID:18430734 RGD:2306201 NCBI chr13:39,353,413...39,396,509
Ensembl chr13:39,353,079...39,396,711
JBrowse link
G Adgrb1 adhesion G protein-coupled receptor B1 acts_upstream_of_or_within IEA
ISO
GO_REF:0000107
(PMID:24613359)
Ensembl
RGD
PMID:24613359 GO_REF:0000107 NCBI chr 7:108,293,681...108,365,892
Ensembl chr 7:108,293,818...108,365,870
JBrowse link
G Adgrb2 adhesion G protein-coupled receptor B2 acts_upstream_of_or_within
involved_in
IEA
ISO
GO_REF:0000107
(PMID:24613359)
GO_REF:0000117
Ensembl
RGD
UniProt
PMID:24613359 GO_REF:0000107 GO_REF:0000117 NCBI chr 5:147,581,573...147,646,726
Ensembl chr 5:147,611,580...147,646,726
JBrowse link
G Adgrb3 adhesion G protein-coupled receptor B3 acts_upstream_of_or_within
involved_in
IEA
ISO
GO_REF:0000107
(PMID:24613359)
GO_REF:0000117
Ensembl
RGD
UniProt
PMID:24613359 GO_REF:0000107 GO_REF:0000117 NCBI chr 9:34,917,474...35,645,350
Ensembl chr 9:34,917,474...35,644,811
JBrowse link
G Adgre5 adhesion G protein-coupled receptor E5 acts_upstream_of_or_within ISO (PMID:24613359) RGD PMID:24613359 NCBI chr19:41,302,687...41,332,183
Ensembl chr19:41,303,213...41,324,641
JBrowse link
G Adgrl1 adhesion G protein-coupled receptor L1 acts_upstream_of_or_within ISO (PMID:24613359) RGD PMID:24613359 NCBI chr19:41,107,162...41,148,752
Ensembl chr19:41,109,117...41,148,896
JBrowse link
G Adgrl2 adhesion G protein-coupled receptor L2 acts_upstream_of_or_within ISO (PMID:24613359) RGD PMID:24613359 NCBI chr 2:240,356,176...240,987,246
Ensembl chr 2:240,356,177...240,855,933
JBrowse link
G Adgrl3 adhesion G protein-coupled receptor L3 acts_upstream_of_or_within ISO (PMID:24613359) RGD PMID:24613359 NCBI chr14:26,690,891...27,458,132
Ensembl chr14:26,722,194...27,280,418
JBrowse link
G Adnp activity-dependent neuroprotector homeobox IDA RGD PMID:15800376 RGD:2312779 NCBI chr 3:177,310,258...177,340,379
Ensembl chr 3:177,310,258...177,336,188
JBrowse link
G Amigo1 adhesion molecule with Ig like domain 1 involved_in
acts_upstream_of_or_within
IBA
ISO
IEA
GO_REF:0000033
(PMID:24613359)
GO_REF:0000107
GO_Central
RGD
Ensembl
PMID:24613359 GO_REF:0000033 GO_REF:0000107 NCBI chr 2:198,511,285...198,516,744
Ensembl chr 2:198,511,039...198,521,146
JBrowse link
G Amigo2 adhesion molecule with Ig like domain 2 involved_in
acts_upstream_of_or_within
IBA
ISO
IEA
GO_REF:0000033
(PMID:24613359)
GO_REF:0000107
GO_Central
RGD
Ensembl
PMID:24613359 GO_REF:0000033 GO_REF:0000107 NCBI chr 7:130,270,639...130,273,735
Ensembl chr 7:130,270,554...130,282,218
JBrowse link
G Amigo3 adhesion molecule with Ig like domain 3 involved_in
acts_upstream_of_or_within
IBA
ISO
IEA
GO_REF:0000033
(PMID:24613359)
GO_REF:0000107
GO_Central
RGD
Ensembl
PMID:24613359 GO_REF:0000033 GO_REF:0000107 NCBI chr 8:117,620,499...117,622,025
Ensembl chr 8:117,616,629...117,626,577
JBrowse link
G Asic2 acid sensing ion channel subunit 2 acts_upstream_of_or_within ISO MGI:2180111 (PMID:19571134) RGD PMID:19571134 NCBI chr10:66,368,308...67,438,237
Ensembl chr10:66,368,310...66,636,245
JBrowse link
G Bdnf brain-derived neurotrophic factor involved_in ISO
IEA
(PMID:19036963)
GO_REF:0000107
RGD
Ensembl
PMID:19036963 GO_REF:0000107 NCBI chr 3:116,619,633...116,670,212
Ensembl chr 3:116,619,633...116,670,657
JBrowse link
G Cbln1 cerebellin 1 precursor acts_upstream_of_or_within IEA
ISO
GO_REF:0000107
MGI:1096391 (PMID:21356198)
Ensembl
RGD
PMID:21356198 GO_REF:0000107 NCBI chr19:35,782,151...35,785,960
Ensembl chr19:35,781,952...35,785,960
JBrowse link
G Cbln2 cerebellin 2 precursor acts_upstream_of_or_within IEA
ISO
GO_REF:0000107
(PMID:21356198)
Ensembl
RGD
PMID:21356198 GO_REF:0000107 NCBI chr18:82,215,210...82,222,648
Ensembl chr18:82,215,220...82,222,648
JBrowse link
G Clstn1 calsyntenin 1 involved_in
acts_upstream_of_or_within
IBA
ISO
IEA
GO_REF:0000033
MGI:1929897|MGI:2178323 (PMID:24613359)
GO_REF:0000107
GO_Central
RGD
Ensembl
PMID:24613359 GO_REF:0000033 GO_REF:0000107 NCBI chr 5:165,314,128...165,377,627
Ensembl chr 5:165,314,309...165,377,625
JBrowse link
G Clstn2 calsyntenin 2 involved_in
acts_upstream_of_or_within
IBA
ISO
IEA
GO_REF:0000033
MGI:1929895|MGI:2178323 (PMID:24613359)
GO_REF:0000107
GO_Central
RGD
Ensembl
PMID:24613359 GO_REF:0000033 GO_REF:0000107 NCBI chr 8:106,899,894...107,516,402
Ensembl chr 8:106,899,894...107,040,053
JBrowse link
G Clstn3 calsyntenin 3 involved_in
acts_upstream_of_or_within
IBA
ISO
IEA
GO_REF:0000033
MGI:1929895|MGI:1929897 (PMID:24613359)
GO_REF:0000107
GO_Central
RGD
Ensembl
PMID:24613359 GO_REF:0000033 GO_REF:0000107 NCBI chr 4:159,017,795...159,051,069
Ensembl chr 4:159,017,795...159,051,069
JBrowse link
G Cux2 cut-like homeobox 2 involved_in ISO (PMID:20510857) RGD PMID:20510857 NCBI chr12:40,168,402...40,368,303
Ensembl chr12:40,149,292...40,366,528
JBrowse link
G Dlg4 discs large MAGUK scaffold protein 4 IMP RGD PMID:26738857 RGD:243048441 NCBI chr10:55,239,397...55,267,780
Ensembl chr10:55,236,869...55,265,839
JBrowse link
G Dlg5 discs large MAGUK scaffold protein 5 involved_in IEA
ISO
GO_REF:0000107
(PMID:25232112)
Ensembl
RGD
PMID:25232112 GO_REF:0000107 NCBI chr15:125,287...237,334
Ensembl chr15:125,290...237,332
JBrowse link
G Eef2k eukaryotic elongation factor-2 kinase IMP RGD PMID:20427644 RGD:10401235 NCBI chr 1:184,824,420...184,888,048
Ensembl chr 1:184,824,420...184,888,048
JBrowse link
G Efna5 ephrin A5 involved_in ISO (PMID:19036963) RGD PMID:19036963 NCBI chr 9:109,763,786...110,042,396
Ensembl chr 9:109,767,252...110,042,348
JBrowse link
G Ephb1 Eph receptor B1 involved_in ISS
ISO
IEA
GO_REF:0000024
(PMID:14691139)
GO_REF:0000107
UniProt
RGD
Ensembl
PMID:14691139 GO_REF:0000024 GO_REF:0000107 NCBI chr 8:111,386,432...111,823,759
Ensembl chr 8:111,386,432...111,823,759
JBrowse link
G Ephb2 Eph receptor B2 involved_in IMP
ISO
IEA
(PMID:14691139), (PMID:21029865)
GO_REF:0000107
RGD
Ensembl
PMID:14691139 PMID:21029865 PMID:21364901 GO_REF:0000107, RGD:127285794 NCBI chr 5:154,179,065...154,360,459
Ensembl chr 5:154,179,065...154,360,615
JBrowse link
G Ephb3 Eph receptor B3 involved_in IEA
ISO
GO_REF:0000107
(PMID:14691139)
Ensembl
RGD
PMID:14691139 GO_REF:0000107 NCBI chr11:93,345,098...93,363,775
Ensembl chr11:93,345,098...93,363,775
JBrowse link
G Flrt1 fibronectin leucine rich transmembrane protein 1 acts_upstream_of_or_within ISO (PMID:24613359) RGD PMID:24613359 NCBI chr 1:213,704,983...213,782,958
Ensembl chr 1:213,704,038...213,782,981
JBrowse link
G Flrt2 fibronectin leucine rich transmembrane protein 2 acts_upstream_of_or_within ISO (PMID:24613359) RGD PMID:24613359 NCBI chr 6:120,507,998...120,603,133
Ensembl chr 6:120,507,689...120,609,004
JBrowse link
G Flrt3 fibronectin leucine rich transmembrane protein 3 acts_upstream_of_or_within IEA
ISO
GO_REF:0000107
(PMID:24613359)
Ensembl
RGD
PMID:24613359 GO_REF:0000107 NCBI chr 3:148,448,115...148,461,458
Ensembl chr 3:148,439,354...148,461,650
JBrowse link
G Ghrl ghrelin and obestatin prepropeptide acts_upstream_of_or_within ISO
IEA
(PMID:16491079)
MGI:3045041 (PMID:16491079)
GO_REF:0000107
RGD
Ensembl
PMID:16491079 GO_REF:0000107 NCBI chr 4:148,421,315...148,431,128
Ensembl chr 4:148,421,315...148,425,969
JBrowse link
G Gprasp3 G protein-coupled receptor associated sorting protein family member 3 involved_in IEA
ISO
GO_REF:0000107
(PMID:21199326)
Ensembl
RGD
PMID:21199326 GO_REF:0000107 NCBI chr  X:103,639,366...103,644,561
Ensembl chr  X:103,609,243...103,650,463
JBrowse link
G Grid2 glutamate ionotropic receptor delta type subunit 2 involved_in ISO
IEA
(PMID:27418511)
GO_REF:0000107
RGD
Ensembl
PMID:27418511 GO_REF:0000107 NCBI chr 4:93,745,165...95,222,354
Ensembl chr 4:93,745,277...95,219,868
JBrowse link
G Il1rap interleukin 1 receptor accessory protein involved_in ISS
ISO
GO_REF:0000024
(PMID:25908590)
UniProt
RGD
PMID:25908590 GO_REF:0000024 NCBI chr11:87,567,813...87,704,346
Ensembl chr11:87,575,116...87,704,342
JBrowse link
G Il1rapl1 interleukin 1 receptor accessory protein-like 1 involved_in ISS
ISO
GO_REF:0000024
(PMID:25908590)
UniProt
RGD
PMID:25908590 GO_REF:0000024 NCBI chr  X:55,322,779...56,827,486
Ensembl chr  X:55,328,964...56,826,613
JBrowse link
G Iqsec1 IQ motif and Sec7 domain ArfGEF 1 IMP RGD PMID:26884337 RGD:11560558 NCBI chr 4:124,725,917...125,045,351
Ensembl chr 4:124,725,917...125,045,550
JBrowse link
G Iqsec2 IQ motif and Sec7 domain ArfGEF 2 IMP RGD PMID:26884337 RGD:11560558 NCBI chr  X:24,734,202...24,816,566
Ensembl chr  X:24,734,246...24,816,566
JBrowse link
G Lingo2 leucine rich repeat and Ig domain containing 2 acts_upstream_of_or_within ISO (PMID:24613359) RGD PMID:24613359 NCBI chr 5:55,166,250...56,488,672
Ensembl chr 5:55,156,997...56,489,155
JBrowse link
G Lingo4 leucine rich repeat and Ig domain containing 4 acts_upstream_of_or_within IEA
ISO
GO_REF:0000107
(PMID:24613359)
Ensembl
RGD
PMID:24613359 GO_REF:0000107 NCBI chr 2:184,724,554...184,729,819
Ensembl chr 2:184,724,554...184,729,819
JBrowse link
G Lrrc24 leucine rich repeat containing 24 acts_upstream_of_or_within IEA
ISO
GO_REF:0000107
(PMID:24613359)
Ensembl
RGD
PMID:24613359 GO_REF:0000107 NCBI chr 7:110,317,935...110,325,201
Ensembl chr 7:110,317,020...110,325,074
JBrowse link
G Lrrc4b leucine rich repeat containing 4B involved_in IBA
ISO
IEA
GO_REF:0000033
(PMID:21940441)
GO_REF:0000107
GO_Central
RGD
Ensembl
PMID:21940441 GO_REF:0000033 GO_REF:0000107 NCBI chr 1:104,058,558...104,092,831
Ensembl chr 1:104,072,128...104,093,298
JBrowse link
G Lrrn1 leucine rich repeat neuronal 1 acts_upstream_of_or_within IEA
ISO
GO_REF:0000107
(PMID:24613359)
Ensembl
RGD
PMID:24613359 GO_REF:0000107 NCBI chr 4:142,032,805...142,072,320
Ensembl chr 4:142,032,041...142,074,760
JBrowse link
G Lrrn3 leucine rich repeat neuronal 3 acts_upstream_of_or_within IEA
ISO
GO_REF:0000107
(PMID:24613359)
Ensembl
RGD
PMID:24613359 GO_REF:0000107 NCBI chr 6:64,216,164...64,247,293
Ensembl chr 6:64,215,878...64,247,614
JBrowse link
G Lrrtm1 leucine rich repeat transmembrane neuronal 1 involved_in
acts_upstream_of_or_within
IBA
ISO
GO_REF:0000033
(PMID:24613359)
GO_Central
RGD
PMID:24613359 GO_REF:0000033 NCBI chr 4:111,246,213...111,295,638
Ensembl chr 4:111,235,054...111,276,818
JBrowse link
G Lrrtm2 leucine rich repeat transmembrane neuronal 2 acts_upstream_of_or_within IEA
ISO
GO_REF:0000107
(PMID:24613359)
Ensembl
RGD
PMID:24613359 GO_REF:0000107 NCBI chr18:27,091,919...27,096,967
Ensembl chr18:27,091,919...27,096,967
JBrowse link
G Lrrtm3 leucine rich repeat transmembrane neuronal 3 acts_upstream_of_or_within
involved_in
IEA
ISO
IBA
GO_REF:0000107
(PMID:24613359)
GO_REF:0000033
Ensembl
RGD
GO_Central
PMID:24613359 GO_REF:0000033 GO_REF:0000107 NCBI chr20:24,514,304...24,688,322
Ensembl chr20:24,514,284...24,689,002
JBrowse link
G Lrrtm4 leucine rich repeat transmembrane neuronal 4 involved_in
acts_upstream_of_or_within
IBA
ISO
GO_REF:0000033
(PMID:24613359)
GO_Central
RGD
PMID:24613359 GO_REF:0000033 NCBI chr 4:114,103,783...114,894,696
Ensembl chr 4:114,103,870...114,109,726
JBrowse link
G Lrtm1 leucine-rich repeats and transmembrane domains 1 acts_upstream_of_or_within ISO (PMID:24613359) RGD PMID:24613359 NCBI chr16:4,216,947...4,224,447 JBrowse link
G Lrtm2 leucine-rich repeats and transmembrane domains 2 acts_upstream_of_or_within
involved_in
IEA
ISO
GO_REF:0000107
(PMID:24613359)
GO_REF:0000117
Ensembl
RGD
UniProt
PMID:24613359 GO_REF:0000107 GO_REF:0000117 NCBI chr 4:154,158,165...154,180,389
Ensembl chr 4:154,158,168...154,167,641
JBrowse link
G Nlgn1 neuroligin 1 involved_in
acts_upstream_of_or_within
IDA
ISO
IEA
PMID:17582332
(PMID:21356198)
GO_REF:0000117
(PMID:24613359)
PMID:15797875
RGD
UniProt
PMID:21356198 PMID:24613359 PMID:17582332 PMID:15797875 GO_REF:0000117, RGD:8553502, RGD:8554205 NCBI chr 2:110,184,987...111,110,316
Ensembl chr 2:110,186,573...110,909,984
JBrowse link
G Nlgn2 neuroligin 2 involved_in IDA
IEA
PMID:15797875
GO_REF:0000117
UniProt PMID:15797875 GO_REF:0000117, RGD:8554205 NCBI chr10:55,042,175...55,056,578
Ensembl chr10:55,043,185...55,056,578
JBrowse link
G Nlgn3 neuroligin 3 involved_in IDA
ISO
IEA
PMID:15797875
(PMID:21642956)
GO_REF:0000117
RGD
UniProt
PMID:21642956 PMID:15797875 GO_REF:0000117, RGD:8554205 NCBI chr  X:70,469,251...70,497,380
Ensembl chr  X:70,469,457...70,497,379
JBrowse link
G Nrxn1 neurexin 1 involved_in
acts_upstream_of_or_within
ISS
ISO
IEA
TAS
GO_REF:0000024
MGI:88281|MGI:88282 (PMID:21356198)
GO_REF:0000107
PMID:15797875
BHF-UCL
RGD
Ensembl
PMID:21356198 PMID:15797875 GO_REF:0000024 GO_REF:0000107, RGD:8554205 NCBI chr 6:8,931,360...10,077,381
Ensembl chr 6:8,935,523...10,077,374
JBrowse link
G Ntrk1 neurotrophic receptor tyrosine kinase 1 acts_upstream_of_or_within IEA
ISO
GO_REF:0000107
(PMID:24613359)
Ensembl
RGD
PMID:24613359 GO_REF:0000107 NCBI chr 2:175,534,844...175,551,664
Ensembl chr 2:175,534,844...175,551,787
JBrowse link
G Ntrk2 neurotrophic receptor tyrosine kinase 2 acts_upstream_of_or_within IEA
ISO
GO_REF:0000107
(PMID:24613359)
Ensembl
RGD
PMID:24613359 GO_REF:0000107 NCBI chr17:5,560,558...5,875,899
Ensembl chr17:5,564,570...5,874,628
JBrowse link
G Ntrk3 neurotrophic receptor tyrosine kinase 3 acts_upstream_of_or_within IEA
ISO
GO_REF:0000107
(PMID:24613359)
Ensembl
RGD
PMID:24613359 GO_REF:0000107 NCBI chr 1:141,526,192...141,913,575
Ensembl chr 1:141,542,569...141,913,004
JBrowse link
G Opcml opioid binding protein/cell adhesion molecule-like IDA RGD PMID:19711485 RGD:596948412 NCBI chr 8:34,451,629...35,562,897
Ensembl chr 8:34,451,500...35,558,966
JBrowse link
G Oxt oxytocin/neurophysin I prepropeptide IDA RGD PMID:16488155 RGD:2304173 NCBI chr 3:138,235,754...138,236,594
Ensembl chr 3:138,235,754...138,236,594
JBrowse link
G Oxtr oxytocin receptor IMP RGD PMID:16488155 RGD:2304173 NCBI chr 4:147,154,374...147,171,723
Ensembl chr 4:147,154,374...147,170,750
JBrowse link
G Pik3r1 phosphoinositide-3-kinase regulatory subunit 1 involved_in IDA PMID:21414895 CACAO PMID:21414895 RGD:15023480 NCBI chr 2:34,612,946...34,697,660
Ensembl chr 2:34,612,946...34,626,347
JBrowse link
G Prkca protein kinase C, alpha IMP RGD PMID:18073185 RGD:2293299 NCBI chr10:93,388,991...93,787,617
Ensembl chr10:93,388,991...93,787,572
JBrowse link
G Ptprd protein tyrosine phosphatase, receptor type, D involved_in ISO (PMID:25908590), (PMID:25989451) RGD PMID:25908590 PMID:25989451 NCBI chr 5:95,093,221...97,415,498
Ensembl chr 5:95,095,858...96,178,903
JBrowse link
G Rtn4rl2 reticulon 4 receptor-like 2 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr 3:90,361,234...90,377,775
Ensembl chr 3:90,361,839...90,377,974
JBrowse link
G Slit2 slit guidance ligand 2 IMP RGD PMID:26738857 RGD:243048441 NCBI chr14:66,829,661...67,168,517
Ensembl chr14:66,829,661...67,167,146
JBrowse link
G Slitrk1 SLIT and NTRK-like family, member 1 involved_in
acts_upstream_of_or_within
IBA
ISO
IEA
GO_REF:0000033
(PMID:24613359)
GO_REF:0000117
GO_REF:0000107
GO_Central
RGD
UniProt
Ensembl
PMID:24613359 GO_REF:0000033 GO_REF:0000107 GO_REF:0000117 NCBI chr15:92,137,703...92,141,741
Ensembl chr15:92,135,994...92,142,105
JBrowse link
G Slitrk2 SLIT and NTRK-like family, member 2 involved_in
acts_upstream_of_or_within
IBA
ISO
IEA
GO_REF:0000033
(PMID:25989451)
(PMID:24613359)
GO_REF:0000117
GO_REF:0000107
GO_Central
RGD
UniProt
Ensembl
PMID:24613359 PMID:25989451 GO_REF:0000033 GO_REF:0000107 GO_REF:0000117 NCBI chr  X:150,287,418...150,299,832
Ensembl chr  X:150,287,303...150,314,997
JBrowse link
G Slitrk3 SLIT and NTRK-like family, member 3 involved_in
acts_upstream_of_or_within
IBA
ISO
IEA
GO_REF:0000033
(PMID:24613359)
GO_REF:0000117
GO_Central
RGD
UniProt
PMID:24613359 GO_REF:0000033 GO_REF:0000117 NCBI chr 2:159,983,650...159,996,194
Ensembl chr 2:159,973,029...159,996,342
JBrowse link
G Slitrk4 SLIT and NTRK-like family, member 4 involved_in
acts_upstream_of_or_within
IBA
ISO
IEA
GO_REF:0000033
(PMID:24613359)
GO_REF:0000117
GO_Central
RGD
UniProt
PMID:24613359 GO_REF:0000033 GO_REF:0000117 NCBI chr  X:147,728,163...147,755,086
Ensembl chr  X:147,727,983...147,755,557
JBrowse link
G Slitrk5 SLIT and NTRK-like family, member 5 involved_in
acts_upstream_of_or_within
IBA
ISO
IEA
GO_REF:0000033
(PMID:24613359)
GO_REF:0000117
GO_Central
RGD
UniProt
PMID:24613359 GO_REF:0000033 GO_REF:0000117 NCBI chr15:95,261,397...95,270,465
Ensembl chr15:95,261,005...95,276,090
JBrowse link
G Slitrk6 SLIT and NTRK-like family, member 6 involved_in
acts_upstream_of_or_within
IBA
ISO
IEA
GO_REF:0000033
(PMID:24613359)
GO_REF:0000107
GO_REF:0000117
GO_Central
RGD
Ensembl
UniProt
PMID:24613359 GO_REF:0000033 GO_REF:0000107 GO_REF:0000117 NCBI chr15:93,977,812...93,984,431
Ensembl chr15:93,969,038...93,984,526
JBrowse link
G Srpx2 sushi-repeat-containing protein, X-linked 2 involved_in ISO
IEA
IBA
IDA
(PMID:24179158)
GO_REF:0000107
GO_REF:0000033
RGD
Ensembl
GO_Central
PMID:24179158 PMID:24179158 GO_REF:0000033 GO_REF:0000107, RGD:8553698 NCBI chr  X:101,399,748...101,425,486
Ensembl chr  X:101,399,853...101,425,484
JBrowse link
G St8sia2 ST8 alpha-N-acetyl-neuraminide alpha-2,8-sialyltransferase 2 IMP RGD PMID:16887122 RGD:27372880 NCBI chr 1:137,172,354...137,247,796
Ensembl chr 1:137,172,354...137,247,792
JBrowse link
G Stau2 staufen double-stranded RNA binding protein 2 IMP RGD PMID:16418534 RGD:10043163 NCBI chr 5:7,623,528...7,868,206
Ensembl chr 5:7,624,019...7,868,204
JBrowse link
G Syndig1 synapse differentiation inducing 1 involved_in ISO
IEA
IBA
IMP
(PMID:20152115)
GO_REF:0000107
GO_REF:0000033
RGD
Ensembl
GO_Central
PMID:20152115 PMID:20152115 GO_REF:0000033 GO_REF:0000107, RGD:8554654 NCBI chr 3:158,491,474...158,695,174
Ensembl chr 3:158,491,996...158,658,652
JBrowse link
G Thbs2 thrombospondin 2 IMP RGD PMID:15707899 RGD:1580068 NCBI chr 1:64,343,523...64,372,918
Ensembl chr 1:64,343,523...64,372,918
JBrowse link
G Tpbg trophoblast glycoprotein acts_upstream_of_or_within ISO (PMID:24613359) RGD PMID:24613359 NCBI chr 8:95,673,993...95,677,364
Ensembl chr 8:95,629,267...95,678,394
JBrowse link
G Ube2v2 ubiquitin conjugating enzyme E2 V2 IMP RGD PMID:12750002 RGD:1299567 NCBI chr11:98,808,681...98,842,583
Ensembl chr11:98,807,538...98,843,211
JBrowse link
G Wnt7a Wnt family member 7A involved_in
acts_upstream_of_or_within
ISO
IEA
(PMID:18986540)
(PMID:9405095)
GO_REF:0000107
RGD
Ensembl
PMID:9405095 PMID:18986540 GO_REF:0000107 NCBI chr 4:125,420,276...125,466,149
Ensembl chr 4:125,420,276...125,466,149
JBrowse link
positive regulation of synaptic assembly at neuromuscular junction term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Agrn agrin involved_in ISS
ISO
GO_REF:0000024
(PMID:10402191)
UniProt
RGD
PMID:10402191 GO_REF:0000024 NCBI chr 5:172,031,528...172,064,429
Ensembl chr 5:172,031,528...172,064,539
JBrowse link
G Gsk3b glycogen synthase kinase 3 beta involved_in IMP PMID:25764078 CACAO PMID:25764078 RGD:15023478 NCBI chr11:76,004,502...76,154,665
Ensembl chr11:76,009,507...76,153,249
JBrowse link
G Musk muscle associated receptor tyrosine kinase IMP RGD PMID:14749715 RGD:2317108 NCBI chr 5:77,853,560...77,967,653
Ensembl chr 5:77,853,736...77,964,338
JBrowse link
postsynaptic density assembly term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G C1ql2 complement C1q like 2 involved_in IEA
ISO
GO_REF:0000107
(PMID:27133466)
Ensembl
RGD
PMID:27133466 GO_REF:0000107 NCBI chr13:34,023,902...34,025,437
Ensembl chr13:34,023,177...34,026,020
JBrowse link
G C1ql3 complement C1q like 3 involved_in ISO (PMID:27133466) RGD PMID:27133466 NCBI chr17:81,028,418...81,038,244
Ensembl chr17:81,028,418...81,038,244
JBrowse link
G Csmd2 CUB and Sushi multiple domains 2 involved_in ISO (PMID:31068362) RGD PMID:31068362 NCBI chr 5:145,626,823...146,196,815
Ensembl chr 5:145,626,845...146,196,812
JBrowse link
G Nptx1 neuronal pentraxin 1 involved_in EXP
IMP
IDA
PMID:29024665 SynGO PMID:29024665 PMID:29024665 PMID:29024665 RGD:13702141, RGD:13702141, RGD:13702141 NCBI chr10:105,309,578...105,318,829
Ensembl chr10:105,309,578...105,318,863
JBrowse link
G Nrxn3 neurexin 3 involved_in IEA
ISO
GO_REF:0000107
(PMID:27133466)
Ensembl
RGD
PMID:27133466 GO_REF:0000107 NCBI chr 6:113,372,667...115,004,073
Ensembl chr 6:113,443,524...115,002,540
JBrowse link
G Ntrk3 neurotrophic receptor tyrosine kinase 3 involved_in IDA
EXP
PMID:21262467 SynGO PMID:21262467 PMID:21262467 RGD:13702219, RGD:13702219 NCBI chr 1:141,526,192...141,913,575
Ensembl chr 1:141,542,569...141,913,004
JBrowse link
G Pten phosphatase and tensin homolog involved_in ISO (PMID:18082964) RGD PMID:18082964 NCBI chr 1:240,043,707...240,110,330
Ensembl chr 1:240,043,707...240,110,330
JBrowse link
G Reln reelin involved_in ISO (PMID:21664258) RGD PMID:21664258 NCBI chr 4:13,628,440...14,055,201
Ensembl chr 4:13,628,399...14,055,162
JBrowse link
G Shank3 SH3 and multiple ankyrin repeat domains 3 involved_in ISS
ISO
IEA
GO_REF:0000024
(PMID:21423165)
GO_REF:0000107
BHF-UCL
RGD
Ensembl
PMID:21423165 GO_REF:0000024 GO_REF:0000107 NCBI chr 7:122,448,323...122,518,623
Ensembl chr 7:122,448,323...122,510,410
JBrowse link
G Slitrk3 SLIT and NTRK-like family, member 3 acts_upstream_of_or_within ISO MGI:6119690 (PMID:29107521) RGD PMID:29107521 NCBI chr 2:159,983,650...159,996,194
Ensembl chr 2:159,973,029...159,996,342
JBrowse link
postsynaptic membrane assembly term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ephb2 Eph receptor B2 involved_in IMP
IEP
IDA
PMID:11136979 SynGO PMID:11136979 PMID:11136979 PMID:11136979 RGD:13702452, RGD:13702452, RGD:13702452 NCBI chr 5:154,179,065...154,360,459
Ensembl chr 5:154,179,065...154,360,615
JBrowse link
G Lrp4 LDL receptor related protein 4 involved_in ISS
ISO
IEA
GO_REF:0000024
(PMID:22038977)
GO_REF:0000107
UniProt
RGD
Ensembl
PMID:22038977 GO_REF:0000024 GO_REF:0000107 NCBI chr 3:97,885,373...97,939,366
Ensembl chr 3:97,885,400...97,939,370
JBrowse link
G Nlgn1 neuroligin 1 involved_in ISS
ISO
GO_REF:0000024
(PMID:12796785), (PMID:15620359)
BHF-UCL
RGD
PMID:12796785 PMID:15620359 GO_REF:0000024 NCBI chr 2:110,184,987...111,110,316
Ensembl chr 2:110,186,573...110,909,984
JBrowse link
G Nlgn2 neuroligin 2 involved_in ISS
ISO
IEA
GO_REF:0000024
(PMID:15620359)
GO_REF:0000107
BHF-UCL
RGD
Ensembl
PMID:15620359 GO_REF:0000024 GO_REF:0000107 NCBI chr10:55,042,175...55,056,578
Ensembl chr10:55,043,185...55,056,578
JBrowse link
G Nlgn3 neuroligin 3 involved_in ISS
ISO
IBA
GO_REF:0000024
(PMID:21642956)
GO_REF:0000033
BHF-UCL
RGD
GO_Central
PMID:21642956 GO_REF:0000024 GO_REF:0000033 NCBI chr  X:70,469,251...70,497,380
Ensembl chr  X:70,469,457...70,497,379
JBrowse link
G Nrxn1 neurexin 1 involved_in ISS
ISO
IEA
GO_REF:0000024
(PMID:21424692)
(PMID:15620359)
GO_REF:0000107
BHF-UCL
RGD
Ensembl
PMID:15620359 PMID:21424692 GO_REF:0000024 GO_REF:0000107 NCBI chr 6:8,931,360...10,077,381
Ensembl chr 6:8,935,523...10,077,374
JBrowse link
G Nrxn2 neurexin 2 involved_in ISS
ISO
GO_REF:0000024
(PMID:21424692)
BHF-UCL
RGD
PMID:21424692 GO_REF:0000024 NCBI chr 1:213,155,673...213,271,526
Ensembl chr 1:213,155,673...213,271,526
JBrowse link
postsynaptic specialization assembly term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Crk CRK proto-oncogene, adaptor protein involved_in IEA
ISO
GO_REF:0000107
(PMID:21041412)
Ensembl
RGD
PMID:21041412 GO_REF:0000107 NCBI chr10:61,028,736...61,054,971
Ensembl chr10:61,028,757...61,082,988
JBrowse link
G Crkl CRK like proto-oncogene, adaptor protein involved_in ISO (PMID:21041412) RGD PMID:21041412 NCBI chr11:97,033,033...97,067,457
Ensembl chr11:97,024,782...97,067,457
JBrowse link
G Dock7 dedicator of cytokinesis 7 involved_in ISO (PMID:21041412) RGD PMID:21041412 NCBI chr 5:118,714,863...118,898,362
Ensembl chr 5:118,714,863...118,898,335
JBrowse link
G Nlgn1 neuroligin 1 involved_in ISO (PMID:15620359) RGD PMID:15620359 NCBI chr 2:110,184,987...111,110,316
Ensembl chr 2:110,186,573...110,909,984
JBrowse link
G Nlgn2 neuroligin 2 involved_in IEA
ISO
GO_REF:0000107
(PMID:15620359), (PMID:19755106)
Ensembl
RGD
PMID:15620359 PMID:19755106 GO_REF:0000107 NCBI chr10:55,042,175...55,056,578
Ensembl chr10:55,043,185...55,056,578
JBrowse link
G Nlgn3 neuroligin 3 involved_in IDA PMID:17897391 SynGO PMID:17897391 RGD:9831151 NCBI chr  X:70,469,251...70,497,380
Ensembl chr  X:70,469,457...70,497,379
JBrowse link
G Ntng2 netrin G2 involved_in IEA
ISO
GO_REF:0000107
(PMID:16980967)
Ensembl
RGD
PMID:16980967 GO_REF:0000107 NCBI chr 3:32,889,856...32,949,032
Ensembl chr 3:32,890,575...32,943,821
JBrowse link
presynapse assembly term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Cadm1 cell adhesion molecule 1 involved_in ISO (PMID:12202822) RGD PMID:12202822 NCBI chr 8:56,744,374...57,075,264
Ensembl chr 8:56,744,372...57,080,192
JBrowse link
G Cntn5 contactin 5 involved_in IEA
ISO
GO_REF:0000107
(PMID:24411736)
Ensembl
RGD
PMID:24411736 GO_REF:0000107 NCBI chr 8:15,017,424...16,249,418
Ensembl chr 8:15,018,927...15,969,060
JBrowse link
G Dvl1 dishevelled segment polarity protein 1 involved_in IEA
ISO
GO_REF:0000107
(PMID:16818724)
Ensembl
RGD
PMID:16818724 GO_REF:0000107 NCBI chr 5:171,738,911...171,750,967
Ensembl chr 5:171,739,133...171,750,966
JBrowse link
G Efnb1 ephrin B1 involved_in IMP
IDA
PMID:19915143 SynGO PMID:19915143 PMID:19915143 RGD:13702172, RGD:13702172 NCBI chr  X:68,297,529...68,310,335
Ensembl chr  X:68,297,492...68,349,546
JBrowse link
G Efnb2 ephrin B2 involved_in IMP
IDA
PMID:19915143 SynGO PMID:19915143 PMID:19915143 RGD:13702172, RGD:13702172 NCBI chr16:87,485,215...87,529,224
Ensembl chr16:87,485,198...87,529,208
JBrowse link
G Fzd5 frizzled class receptor 5 involved_in IDA
EXP
IMP
PMID:20530549 SynGO PMID:20530549 PMID:20530549 PMID:20530549 RGD:13702329, RGD:13702329, RGD:13702329 NCBI chr 9:73,606,860...73,614,039
Ensembl chr 9:73,606,860...73,618,612
JBrowse link
G Mdga1 MAM domain containing glycosylphosphatidylinositol anchor 1 acts_upstream_of_or_within ISO (PMID:23358245) RGD PMID:23358245 NCBI chr20:7,901,856...7,965,834
Ensembl chr20:7,901,856...7,965,834
JBrowse link
G Nlgn2 neuroligin 2 acts_upstream_of_or_within IEA
ISO
GO_REF:0000107
(PMID:23358245)
Ensembl
RGD
PMID:23358245 GO_REF:0000107 NCBI chr10:55,042,175...55,056,578
Ensembl chr10:55,043,185...55,056,578
JBrowse link
G Nrxn1 neurexin 1 involved_in IMP
ISO
IEA
IDA
EXP
PMID:12796785
(PMID:21410790)
GO_REF:0000117
GO_REF:0000107
RGD
UniProt
Ensembl
PMID:21410790 PMID:12796785 PMID:12796785 PMID:12796785 GO_REF:0000107 GO_REF:0000117, RGD:13702298, RGD:13702298, RGD:13702298 NCBI chr 6:8,931,360...10,077,381
Ensembl chr 6:8,935,523...10,077,374
JBrowse link
G Nrxn2 neurexin 2 involved_in IEA GO_REF:0000117 UniProt GO_REF:0000117 NCBI chr 1:213,155,673...213,271,526
Ensembl chr 1:213,155,673...213,271,526
JBrowse link
G Nrxn3 neurexin 3 involved_in IEA GO_REF:0000117 UniProt GO_REF:0000117 NCBI chr 6:113,372,667...115,004,073
Ensembl chr 6:113,443,524...115,002,540
JBrowse link
G Ptprd protein tyrosine phosphatase, receptor type, D involved_in ISO
IEA
(PMID:21926414)
GO_REF:0000117
RGD
UniProt
PMID:21926414 GO_REF:0000117 NCBI chr 5:95,093,221...97,415,498
Ensembl chr 5:95,095,858...96,178,903
JBrowse link
G Ptprs protein tyrosine phosphatase, receptor type, S involved_in IDA
EXP
IMP
PMID:21262467 SynGO PMID:21262467 PMID:21262467 PMID:21262467 RGD:13702219, RGD:13702219, RGD:13702219 NCBI chr 9:1,332,558...1,394,161
Ensembl chr 9:1,332,559...1,394,093
JBrowse link
G Sdcbp syndecan binding protein involved_in IDA
IMP
PMID:19915143 SynGO PMID:19915143 PMID:19915143 RGD:13702172, RGD:13702172 NCBI chr 5:24,245,279...24,314,712
Ensembl chr 5:24,245,033...24,326,197
JBrowse link
presynaptic active zone assembly term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Bsn bassoon (presynaptic cytomatrix protein) involved_in IDA
IEA
IBA
PMID:22875941
GO_REF:0000117
GO_REF:0000033
UniProt
GO_Central
PMID:22875941 GO_REF:0000033 GO_REF:0000117, RGD:14390063 NCBI chr 8:117,663,447...117,754,412
Ensembl chr 8:117,670,334...117,754,412
JBrowse link
G Pcdh17 protocadherin 17 acts_upstream_of_or_within
involved_in
IEA
ISO
IBA
GO_REF:0000107
(PMID:23684785)
GO_REF:0000033
Ensembl
RGD
GO_Central
PMID:23684785 GO_REF:0000033 GO_REF:0000107 NCBI chr15:66,631,549...66,725,007
Ensembl chr15:66,633,142...66,722,105
JBrowse link
G Pclo piccolo (presynaptic cytomatrix protein) involved_in IDA
IEA
IBA
PMID:22875941
GO_REF:0000117
GO_REF:0000033
UniProt
GO_Central
PMID:22875941 GO_REF:0000033 GO_REF:0000117, RGD:14390063 NCBI chr 4:20,646,604...21,005,171
Ensembl chr 4:20,646,604...21,005,111
JBrowse link
presynaptic membrane assembly term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Il1rapl1 interleukin 1 receptor accessory protein-like 1 involved_in ISO (PMID:21940441) RGD PMID:21940441 NCBI chr  X:55,322,779...56,827,486
Ensembl chr  X:55,328,964...56,826,613
JBrowse link
G Lrp4 LDL receptor related protein 4 involved_in ISS
ISO
IEA
GO_REF:0000024
(PMID:22038977)
GO_REF:0000107
UniProt
RGD
Ensembl
PMID:22038977 GO_REF:0000024 GO_REF:0000107 NCBI chr 3:97,885,373...97,939,366
Ensembl chr 3:97,885,400...97,939,370
JBrowse link
G Nlgn1 neuroligin 1 involved_in IDA
ISO
IEA
PMID:19730411
(PMID:10892652), (PMID:12796785), (PMID:15620359)
GO_REF:0000117
PMID:15797875
RGD
UniProt
PMID:10892652 PMID:12796785 PMID:15620359 PMID:19730411 PMID:15797875 GO_REF:0000117, RGD:8554379, RGD:8554205 NCBI chr 2:110,184,987...111,110,316
Ensembl chr 2:110,186,573...110,909,984
JBrowse link
G Nlgn2 neuroligin 2 involved_in IDA
ISO
IEA
PMID:15797875
(PMID:15620359), (PMID:19016888)
GO_REF:0000117
GO_REF:0000107
RGD
UniProt
Ensembl
PMID:15620359 PMID:19016888 PMID:15797875 GO_REF:0000107 GO_REF:0000117, RGD:8554205 NCBI chr10:55,042,175...55,056,578
Ensembl chr10:55,043,185...55,056,578
JBrowse link
G Nlgn3 neuroligin 3 involved_in IDA
IEA
IBA
PMID:15797875
GO_REF:0000117
GO_REF:0000033
UniProt
GO_Central
PMID:15797875 GO_REF:0000033 GO_REF:0000117, RGD:8554205 NCBI chr  X:70,469,251...70,497,380
Ensembl chr  X:70,469,457...70,497,379
JBrowse link
G Nrxn1 neurexin 1 involved_in ISS
ISO
GO_REF:0000024
(PMID:12796785)
BHF-UCL
RGD
PMID:12796785 GO_REF:0000024 NCBI chr 6:8,931,360...10,077,381
Ensembl chr 6:8,935,523...10,077,374
JBrowse link
G Pten phosphatase and tensin homolog involved_in ISO (PMID:18082964) RGD PMID:18082964 NCBI chr 1:240,043,707...240,110,330
Ensembl chr 1:240,043,707...240,110,330
JBrowse link
G Ptprd protein tyrosine phosphatase, receptor type, D involved_in ISO (PMID:21940441) RGD PMID:21940441 NCBI chr 5:95,093,221...97,415,498
Ensembl chr 5:95,095,858...96,178,903
JBrowse link
regulation of excitatory synapse assembly term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Clstn3 calsyntenin 3 involved_in ISS
ISO
GO_REF:0000024
(PMID:32434929)
UniProt
RGD
PMID:32434929 GO_REF:0000024 NCBI chr 4:159,017,795...159,051,069
Ensembl chr 4:159,017,795...159,051,069
JBrowse link
regulation of inhibitory synapse assembly term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Lhfpl4 LHFPL tetraspan subfamily member 4 involved_in ISS
ISO
IEA
GO_REF:0000024
(PMID:29742426)
GO_REF:0000107
UniProt
RGD
Ensembl
PMID:29742426 GO_REF:0000024 GO_REF:0000107 NCBI chr 4:147,872,877...147,895,770
Ensembl chr 4:147,872,877...147,895,770
JBrowse link
regulation of postsynapse assembly term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Afdn afadin, adherens junction formation factor involved_in ISO (PMID:29969655) RGD PMID:29969655 NCBI chr 1:58,041,065...58,170,505
Ensembl chr 1:58,041,641...58,170,505
JBrowse link
G Arhgap12 Rho GTPase activating protein 12 involved_in IDA
IMP
PMID:26854232 SynGO PMID:26854232 PMID:26854232 RGD:11572714, RGD:11572714 NCBI chr17:56,284,282...56,397,630
Ensembl chr17:56,284,286...56,397,563
JBrowse link
G Arhgap33 Rho GTPase activating protein 33 involved_in IEA
ISO
GO_REF:0000107
(PMID:24003235)
Ensembl
RGD
PMID:24003235 GO_REF:0000107 NCBI chr 1:94,903,566...94,917,074
Ensembl chr 1:94,902,922...94,917,684
JBrowse link
G Arhgef15 Rho guanine nucleotide exchange factor 15 involved_in IEA
ISO
GO_REF:0000107
(PMID:28185854)
Ensembl
RGD
PMID:28185854 GO_REF:0000107 NCBI chr10:54,149,372...54,162,128
Ensembl chr10:54,149,372...54,162,128
JBrowse link
G Asic1 acid sensing ion channel subunit 1 involved_in ISO (PMID:17060608) RGD PMID:17060608 NCBI chr 7:132,677,158...132,707,379
Ensembl chr 7:132,698,723...132,707,832
JBrowse link
G Asic2 acid sensing ion channel subunit 2 involved_in ISO (PMID:19571134) RGD PMID:19571134 NCBI chr10:66,368,308...67,438,237
Ensembl chr10:66,368,310...66,636,245
JBrowse link
G Carmil3 capping protein regulator and myosin 1 linker 3 involved_in IEA
ISO
GO_REF:0000107
(PMID:30674877)
Ensembl
RGD
PMID:30674877 GO_REF:0000107 NCBI chr15:32,948,228...32,965,829
Ensembl chr15:32,948,856...32,965,811
JBrowse link
G Cc2d1a coiled-coil and C2 domain containing 1A involved_in IEA
ISO
GO_REF:0000107
(PMID:26826102)
Ensembl
RGD
PMID:26826102 GO_REF:0000107 NCBI chr19:40,916,587...40,931,702
Ensembl chr19:40,916,532...40,931,701
JBrowse link
G Cpeb3 cytoplasmic polyadenylation element binding protein 3 involved_in IBA
ISO
GO_REF:0000033
(PMID:22153079)
GO_Central
RGD
PMID:22153079 GO_REF:0000033 NCBI chr 1:244,161,690...244,343,765
Ensembl chr 1:244,161,690...244,343,561
JBrowse link
G Crmp1 collapsin response mediator protein 1 involved_in IEA
ISO
GO_REF:0000107
(PMID:18003833)
Ensembl
RGD
PMID:18003833 GO_REF:0000107 NCBI chr14:77,734,675...77,780,916
Ensembl chr14:77,734,675...77,780,916
JBrowse link
G Cyfip2 cytoplasmic FMR1 interacting protein 2 involved_in ISO (PMID:28692454) RGD PMID:28692454 NCBI chr10:31,122,653...31,242,440
Ensembl chr10:31,122,653...31,242,440
JBrowse link
G Dclk1 doublecortin-like kinase 1 involved_in ISO (PMID:23385585) RGD PMID:23385585 NCBI chr 2:141,567,215...141,861,088
Ensembl chr 2:141,571,983...141,861,090
JBrowse link
G Dcx doublecortin involved_in IEA
ISO
GO_REF:0000107
(PMID:29788228)
Ensembl
RGD
PMID:29788228 GO_REF:0000107 NCBI chr  X:112,227,455...112,370,291
Ensembl chr  X:112,227,455...112,304,161
JBrowse link
G Dock1 dedicator of cyto-kinesis 1 involved_in ISO (PMID:21900250) RGD PMID:21900250 NCBI chr 1:198,897,021...199,413,636
Ensembl chr 1:198,897,045...199,413,627
JBrowse link
G Dock10 dedicator of cytokinesis 10 involved_in ISO (PMID:25851601) RGD PMID:25851601 NCBI chr 9:89,291,936...89,549,871
Ensembl chr 9:89,291,800...89,549,973
JBrowse link
G Dock4 dedicator of cytokinesis 4 involved_in IMP
IDA
PMID:23536706 SynGO PMID:23536706 PMID:23536706 RGD:405650262, RGD:405650262 NCBI chr 6:63,240,050...63,629,772
Ensembl chr 6:63,240,136...63,629,772
JBrowse link
G Dpysl2 dihydropyrimidinase-like 2 involved_in IDA
IMP
PMID:29425794 SynGO PMID:29425794 PMID:29425794 RGD:405650303, RGD:405650303 NCBI chr15:45,181,041...45,287,065
Ensembl chr15:45,181,041...45,287,065
JBrowse link
G Elmo1 engulfment and cell motility 1 involved_in IMP
IDA
PMID:21900250 SynGO PMID:21900250 PMID:21900250 RGD:405650271, RGD:405650271 NCBI chr17:48,982,188...49,518,525
Ensembl chr17:48,982,188...49,518,159
JBrowse link
G Fam107a family with sequence similarity 107, member A involved_in ISO (PMID:21969592) RGD PMID:21969592 NCBI chr15:19,038,726...19,060,644
Ensembl chr15:19,038,616...19,065,219
JBrowse link
G Flrt2 fibronectin leucine rich transmembrane protein 2 involved_in IDA
IMP
PMID:29983322 SynGO PMID:29983322 PMID:29983322 RGD:405650287, RGD:405650287 NCBI chr 6:120,507,998...120,603,133
Ensembl chr 6:120,507,689...120,609,004
JBrowse link
G Gna13 G protein subunit alpha 13 involved_in ISO (PMID:34665640) RGD PMID:34665640 NCBI chr10:94,837,271...94,870,290
Ensembl chr10:94,836,444...94,874,968
JBrowse link
G Htr4 5-hydroxytryptamine receptor 4 involved_in IEA
ISO
GO_REF:0000107
(PMID:32060357)
Ensembl
RGD
PMID:32060357 GO_REF:0000107 NCBI chr18:58,036,277...58,221,327
Ensembl chr18:58,036,277...58,219,622
JBrowse link
G Lrp4 LDL receptor related protein 4 involved_in IEA
ISO
GO_REF:0000107
(PMID:25407677)
Ensembl
RGD
PMID:25407677 GO_REF:0000107 NCBI chr 3:97,885,373...97,939,366
Ensembl chr 3:97,885,400...97,939,370
JBrowse link
G Lzts1 leucine zipper tumor suppressor 1 involved_in IEA
ISO
GO_REF:0000107
(PMID:26490870)
Ensembl
RGD
PMID:26490870 GO_REF:0000107 NCBI chr16:25,309,502...25,364,942
Ensembl chr16:25,309,507...25,364,940
JBrowse link
G Lzts3 leucine zipper tumor suppressor family member 3 involved_in IDA
IMP
PMID:27252646 SynGO PMID:27252646 PMID:27252646 RGD:13210540, RGD:13210540 NCBI chr 3:138,303,378...138,313,645
Ensembl chr 3:138,303,378...138,313,611
JBrowse link
G Map1b microtubule-associated protein 1B involved_in IEA
ISO
GO_REF:0000107
(PMID:21984824)
Ensembl
RGD
PMID:21984824 GO_REF:0000107 NCBI chr 2:32,551,423...32,644,471
Ensembl chr 2:32,551,423...32,657,094
JBrowse link
G Mark1 microtubule affinity regulating kinase 1 involved_in IEA
ISO
GO_REF:0000107
(PMID:27829159)
Ensembl
RGD
PMID:27829159 GO_REF:0000107 NCBI chr13:98,981,727...99,086,998
Ensembl chr13:98,983,020...99,086,701
JBrowse link
G Nae1 NEDD8 activating enzyme E1 subunit 1 involved_in IEA
ISO
GO_REF:0000107
(PMID:25581363)
Ensembl
RGD
PMID:25581363 GO_REF:0000107 NCBI chr19:452,462...478,591
Ensembl chr19:452,432...478,831
JBrowse link
G Nckipsd NCK interacting protein with SH3 domain involved_in IDA
IMP
PMID:23342115 SynGO PMID:23342115 PMID:23342115 RGD:405650384, RGD:405650384 NCBI chr 8:118,390,121...118,401,121
Ensembl chr 8:118,390,159...118,401,118
JBrowse link
G Nectin3 nectin cell adhesion molecule 3 involved_in IEA
ISO
GO_REF:0000107
(PMID:28872640)
Ensembl
RGD
PMID:28872640 GO_REF:0000107 NCBI chr11:67,825,296...67,931,999
Ensembl chr11:67,827,137...67,871,383
JBrowse link
G Nedd8 NEDD8 ubiquitin like modifier involved_in IEA
ISO
GO_REF:0000107
(PMID:25581363)
Ensembl
RGD
PMID:25581363 GO_REF:0000107 NCBI chr15:33,123,505...33,135,522
Ensembl chr15:33,123,505...33,135,522
JBrowse link
G Neurl1 neuralized E3 ubiquitin protein ligase 1 involved_in IEA GO_REF:0000107 Ensembl GO_REF:0000107 NCBI chr 1:256,008,012...256,094,219
Ensembl chr 1:256,008,160...256,094,224
JBrowse link
G Nrxn2 neurexin 2 involved_in ISO (PMID:36608123) RGD PMID:36608123 NCBI chr 1:213,155,673...213,271,526
Ensembl chr 1:213,155,673...213,271,526
JBrowse link
G Numb NUMB, endocytic adaptor protein involved_in IDA
IEA
IMP
PMID:16394100
GO_REF:0000117
UniProt PMID:16394100 PMID:16394100 GO_REF:0000117, RGD:2302413, RGD:2302413 NCBI chr 6:109,162,499...109,284,527
Ensembl chr 6:109,162,499...109,284,463
JBrowse link
G Numbl NUMB-like, endocytic adaptor protein involved_in IDA
IEA
IMP
PMID:16394100
GO_REF:0000117
UniProt PMID:16394100 PMID:16394100 GO_REF:0000117, RGD:2302413, RGD:2302413 NCBI chr 1:91,677,437...91,701,415
Ensembl chr 1:91,677,242...91,701,424
JBrowse link
G Palm paralemmin involved_in IMP
IDA
PMID:18287537 SynGO PMID:18287537 PMID:18287537 RGD:8553517, RGD:8553517 NCBI chr 7:10,537,252...10,563,346
Ensembl chr 7:10,537,277...10,563,007
JBrowse link
G Pcdh7 protocadherin 7 involved_in IDA
IMP
PMID:32616769 SynGO PMID:32616769 PMID:32616769 RGD:405650241, RGD:405650241 NCBI chr14:56,684,817...57,114,976
Ensembl chr14:56,687,725...57,112,665
JBrowse link
G Pdlim5 PDZ and LIM domain 5 involved_in IDA
IMP
PMID:19900557 SynGO PMID:19900557 PMID:19900557 RGD:8554803, RGD:8554803 NCBI chr 2:233,625,478...233,793,582
Ensembl chr 2:233,628,503...233,793,528
JBrowse link
G Ppp1r9b protein phosphatase 1, regulatory subunit 9B involved_in IEA
ISO
GO_REF:0000107
(PMID:10922077)
Ensembl
RGD
PMID:10922077 GO_REF:0000107 NCBI chr10:80,434,888...80,450,919
Ensembl chr10:80,434,900...80,450,919
JBrowse link
G Psd pleckstrin and Sec7 domain containing involved_in IMP
IDA
PMID:16672654 SynGO PMID:16672654 PMID:16672654 RGD:8554141, RGD:8554141 NCBI chr 1:255,114,703...255,130,151
Ensembl chr 1:255,114,703...255,129,553
JBrowse link
G Ptpn1 protein tyrosine phosphatase, non-receptor type 1 involved_in IMP
IDA
PMID:22844492 SynGO PMID:22844492 PMID:22844492 RGD:405650356, RGD:405650356 NCBI chr 3:177,056,588...177,106,424
Ensembl chr 3:177,057,659...177,106,416
JBrowse link
G Pum2 pumilio RNA-binding family member 2 involved_in IMP
IDA
PMID:20133610 SynGO PMID:20133610 PMID:20133610 RGD:405650299, RGD:405650299 NCBI chr 6:37,182,130...37,262,223
Ensembl chr 6:37,182,013...37,262,223
JBrowse link
G Rac1 Rac family small GTPase 1 involved_in ISO (PMID:31369617) RGD PMID:31369617 NCBI chr12:16,150,411...16,170,864
Ensembl chr12:16,128,649...16,172,109
JBrowse link
G Rac3 Rac family small GTPase 3 involved_in IEA
ISO
GO_REF:0000107
(PMID:31369617)
Ensembl
RGD
PMID:31369617 GO_REF:0000107 NCBI chr10:106,501,133...106,503,569
Ensembl chr10:106,501,135...106,503,569
JBrowse link
G Rhog ras homolog family member G involved_in ISO (PMID:21900250) RGD PMID:21900250 NCBI chr 1:166,030,685...166,046,254
Ensembl chr 1:166,017,427...166,044,787
JBrowse link
G Rtn4 reticulon 4 involved_in IEA
ISO
GO_REF:0000107
(PMID:26748478)
Ensembl
RGD
PMID:26748478 GO_REF:0000107 NCBI chr14:107,651,001...107,698,610
Ensembl chr14:107,650,732...107,698,611
JBrowse link
G Rtn4r reticulon 4 receptor involved_in ISO (PMID:26748478) RGD PMID:26748478 NCBI chr11:96,348,613...96,373,554
Ensembl chr11:96,348,502...96,373,554
JBrowse link
G S1pr2 sphingosine-1-phosphate receptor 2 involved_in ISO (PMID:26748478) RGD PMID:26748478 NCBI chr 8:27,779,452...27,790,344
Ensembl chr 8:27,774,566...27,790,577
JBrowse link
G Samd4a sterile alpha motif domain containing 4A involved_in IDA
IEP
PMID:22201125 SynGO PMID:22201125 PMID:22201125 RGD:405650281, RGD:405650281 NCBI chr15:22,616,200...22,831,872
Ensembl chr15:22,614,287...22,831,872
JBrowse link
G Sema4c semaphorin 4C involved_in IEA
ISO
GO_REF:0000107
(PMID:31444474)
Ensembl
RGD
PMID:31444474 GO_REF:0000107 NCBI chr 9:46,287,540...46,298,041
Ensembl chr 9:46,287,542...46,297,998
JBrowse link
G Senp1 SUMO specific peptidase 1 involved_in IDA
IMP
PMID:29425794 SynGO PMID:29425794 PMID:29425794 RGD:405650303, RGD:405650303 NCBI chr 7:131,042,237...131,105,826
Ensembl chr 7:131,044,818...131,100,851
JBrowse link
G Sigmar1 sigma non-opioid intracellular receptor 1 involved_in IDA
IMP
PMID:20018732 SynGO PMID:20018732 PMID:20018732 RGD:405650297, RGD:405650297 NCBI chr 5:61,700,021...61,702,799
Ensembl chr 5:61,700,021...61,702,855
JBrowse link
G Slc12a5 solute carrier family 12 member 5 involved_in IMP
IDA
PMID:18093524 SynGO PMID:18093524 PMID:18093524 RGD:405650301, RGD:405650301 NCBI chr 3:174,115,833...174,155,112
Ensembl chr 3:174,115,833...174,155,112
JBrowse link
G Srgap3 SLIT-ROBO Rho GTPase activating protein 3 involved_in ISO (PMID:21325512) RGD PMID:21325512 NCBI chr 4:147,391,082...147,626,407
Ensembl chr 4:147,395,880...147,625,713
JBrowse link
G Syndig1 synapse differentiation inducing 1 involved_in IDA
IMP
EXP
PMID:20152115 SynGO PMID:20152115 PMID:20152115 PMID:20152115 RGD:8554654, RGD:8554654, RGD:8554654 NCBI chr 3:158,491,474...158,695,174
Ensembl chr 3:158,491,996...158,658,652
JBrowse link
G Trim47 tripartite motif-containing 47 involved_in IDA
IMP
PMID:36211980 SynGO PMID:36211980 PMID:36211980 RGD:405650257, RGD:405650257 NCBI chr10:101,836,465...101,840,936
Ensembl chr10:101,836,465...101,840,936
JBrowse link
G Ube2m ubiquitin-conjugating enzyme E2M involved_in ISO (PMID:25581363) RGD PMID:25581363 NCBI chr 1:82,734,761...82,738,298
Ensembl chr 1:82,732,231...82,738,613
JBrowse link
G Ube3b ubiquitin protein ligase E3B involved_in IEA
ISO
GO_REF:0000107
(PMID:32249816)
Ensembl
RGD
PMID:32249816 GO_REF:0000107 NCBI chr12:47,844,368...47,890,702
Ensembl chr12:47,844,369...47,890,702
JBrowse link
G Usp9x ubiquitin specific peptidase 9, X-linked involved_in ISO (PMID:31813652) RGD PMID:31813652 NCBI chr  X:12,261,633...12,399,780
Ensembl chr  X:12,261,633...12,369,491
JBrowse link
G Vps35 VPS35 retromer complex component involved_in IEA
ISO
GO_REF:0000107
(PMID:26521016)
Ensembl
RGD
PMID:26521016 GO_REF:0000107 NCBI chr19:37,938,989...37,974,887
Ensembl chr19:37,938,720...37,974,886
JBrowse link
G Zdhhc8 zinc finger DHHC-type palmitoyltransferase 8 involved_in ISO (PMID:18836441) RGD PMID:18836441 NCBI chr11:96,259,383...96,273,588
Ensembl chr11:96,259,449...96,284,003
JBrowse link
regulation of postsynaptic density assembly term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Abi3bp ABI family member 3 binding protein involved_in IMP PMID:22485184 ARUK-UCL PMID:22485184 RGD:42721990 NCBI chr11:57,381,282...57,597,989
Ensembl chr11:57,381,422...57,598,120
JBrowse link
G Caskin1 CASK interacting protein 1 involved_in IEA
ISO
GO_REF:0000107
(PMID:31727973)
Ensembl
RGD
PMID:31727973 GO_REF:0000107 NCBI chr10:14,016,780...14,037,927
Ensembl chr10:14,018,012...14,037,924
JBrowse link
G Cbln1 cerebellin 1 precursor involved_in IEA
ISO
GO_REF:0000107
(PMID:20395510)
Ensembl
RGD
PMID:20395510 GO_REF:0000107 NCBI chr19:35,782,151...35,785,960
Ensembl chr19:35,781,952...35,785,960
JBrowse link
G Cript CXXC repeat containing interactor of PDZ3 domain involved_in IMP
IDA
PMID:10570482 SynGO PMID:10570482 PMID:10570482 RGD:8554363, RGD:8554363 NCBI chr 6:13,334,978...13,342,934
Ensembl chr 6:13,334,954...13,345,044
JBrowse link
G Fgfr1 Fibroblast growth factor receptor 1 involved_in IEA
ISO
GO_REF:0000107
(PMID:32324534)
Ensembl
RGD
PMID:32324534 GO_REF:0000107 NCBI chr16:73,194,631...73,249,855
Ensembl chr16:73,194,631...73,249,855
JBrowse link
G Grid2 glutamate ionotropic receptor delta type subunit 2 involved_in IEA
ISO
GO_REF:0000107
(PMID:20395510)
Ensembl
RGD
PMID:20395510 GO_REF:0000107 NCBI chr 4:93,745,165...95,222,354
Ensembl chr 4:93,745,277...95,219,868
JBrowse link
G Il1rap interleukin 1 receptor accessory protein involved_in ISO (PMID:22357843) RGD PMID:22357843 NCBI chr11:87,567,813...87,704,346
Ensembl chr11:87,575,116...87,704,342
JBrowse link
G Lats1 large tumor suppressor kinase 1 involved_in IMP
IDA
EXP
PMID:29317530 SynGO PMID:29317530 PMID:29317530 PMID:29317530 RGD:405650325, RGD:405650325, RGD:405650325 NCBI chr 1:3,980,801...4,014,029
Ensembl chr 1:3,980,544...4,014,029
JBrowse link
G Lrfn1 leucine rich repeat and fibronectin type III domain containing 1 involved_in IMP
IDA
PMID:16630835 SynGO PMID:16630835 PMID:16630835 RGD:13702351, RGD:13702351 NCBI chr 1:92,866,864...92,888,984
Ensembl chr 1:92,874,827...92,888,982
JBrowse link
G Lrfn4 leucine rich repeat and fibronectin type III domain containing 4 involved_in IBA
ISO
IEA
GO_REF:0000033
(PMID:20410109)
GO_REF:0000107
GO_Central
RGD
Ensembl
PMID:20410109 GO_REF:0000033 GO_REF:0000107 NCBI chr 1:211,317,980...211,321,272
Ensembl chr 1:211,317,980...211,321,272
JBrowse link
G Lrrc4b leucine rich repeat containing 4B involved_in IMP
IBA
IDA
PMID:19252495
GO_REF:0000033
GO_Central PMID:19252495 PMID:19252495 GO_REF:0000033, RGD:13702321, RGD:13702321 NCBI chr 1:104,058,558...104,092,831
Ensembl chr 1:104,072,128...104,093,298
JBrowse link
G Lrrtm1 leucine rich repeat transmembrane neuronal 1 involved_in IMP
IDA
PMID:19285470 SynGO PMID:19285470 PMID:19285470 RGD:8554788, RGD:8554788 NCBI chr 4:111,246,213...111,295,638
Ensembl chr 4:111,235,054...111,276,818
JBrowse link
G Lrrtm2 leucine rich repeat transmembrane neuronal 2 involved_in IDA
IMP
PMID:19285470 SynGO PMID:19285470 PMID:19285470 RGD:8554788, RGD:8554788 NCBI chr18:27,091,919...27,096,967
Ensembl chr18:27,091,919...27,096,967
JBrowse link
G Nlgn1 neuroligin 1 involved_in ISO (PMID:32324534) RGD PMID:32324534 NCBI chr 2:110,184,987...111,110,316
Ensembl chr 2:110,186,573...110,909,984
JBrowse link
G Nrxn1 neurexin 1 involved_in IEA
ISO
GO_REF:0000107
(PMID:21410790)
Ensembl
RGD
PMID:21410790 GO_REF:0000107 NCBI chr 6:8,931,360...10,077,381
Ensembl chr 6:8,935,523...10,077,374
JBrowse link
G Prickle1 prickle planar cell polarity protein 1 involved_in IEA
ISO
GO_REF:0000107
(PMID:34613779)
Ensembl
RGD
PMID:34613779 GO_REF:0000107 NCBI chr 7:126,518,587...126,614,581
Ensembl chr 7:126,518,587...126,614,581
JBrowse link
G Prickle2 prickle planar cell polarity protein 2 involved_in ISO (PMID:23711981), (PMID:34613779) RGD PMID:23711981 PMID:34613779 NCBI chr 4:126,426,767...126,771,986
Ensembl chr 4:126,426,771...126,772,008
JBrowse link
G Ptk2b protein tyrosine kinase 2 beta involved_in ISO (PMID:28555636) RGD PMID:28555636 NCBI chr15:44,536,275...44,656,754
Ensembl chr15:44,531,249...44,656,806
JBrowse link
G Ptprd protein tyrosine phosphatase, receptor type, D involved_in IEA
ISO
GO_REF:0000117
(PMID:22357843)
UniProt
RGD
PMID:22357843 GO_REF:0000117 NCBI chr 5:95,093,221...97,415,498
Ensembl chr 5:95,095,858...96,178,903
JBrowse link
G Ptprs protein tyrosine phosphatase, receptor type, S involved_in IDA
ISO
IEA
IMP
EXP
PMID:21262467
(PMID:21262467)
GO_REF:0000117
RGD
UniProt
PMID:21262467 PMID:21262467 PMID:21262467 PMID:21262467 GO_REF:0000117, RGD:13702219, RGD:13702219, RGD:13702219 NCBI chr 9:1,332,558...1,394,161
Ensembl chr 9:1,332,559...1,394,093
JBrowse link
G Sipa1l1 signal-induced proliferation-associated 1 like 1 involved_in IMP
IDA
PMID:11502259 SynGO PMID:11502259 PMID:11502259 RGD:8554032, RGD:8554032 NCBI chr 6:107,570,569...107,849,613
Ensembl chr 6:107,737,392...107,848,160
JBrowse link
regulation of postsynaptic specialization assembly term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Abl1 ABL proto-oncogene 1, non-receptor tyrosine kinase involved_in IDA
EXP
IMP
PMID:20220006 SynGO PMID:20220006 PMID:20220006 PMID:20220006 RGD:8693579, RGD:8693579, RGD:8693579 NCBI chr 3:35,377,587...35,480,843
Ensembl chr 3:35,377,391...35,480,846
JBrowse link
G Arhgef9 Cdc42 guanine nucleotide exchange factor 9 involved_in IBA
ISO
GO_REF:0000033
(PMID:17690689)
GO_Central
RGD
PMID:17690689 GO_REF:0000033 NCBI chr  X:63,929,168...64,087,267
Ensembl chr  X:63,929,176...64,087,104
JBrowse link
G Eef1a1 eukaryotic translation elongation factor 1 alpha 1 involved_in IDA
IEA
IMP
PMID:23839781
GO_REF:0000117
UniProt PMID:23839781 PMID:23839781 GO_REF:0000117, RGD:405650375, RGD:405650375 NCBI chr 8:88,221,839...88,225,688
Ensembl chr 8:88,221,843...88,225,072
JBrowse link
G Eef1a1l1 eukaryotic translation elongation factor 1 alpha 1 like 1 involved_in IEA GO_REF:0000117 UniProt GO_REF:0000117 NCBI chr  X:153,525,380...153,527,134
Ensembl chr  X:153,448,733...153,527,212
JBrowse link
G Eef1a1l2 eukaryotic translation elongation factor 1 alpha 1 like 2 involved_in IEA GO_REF:0000117 UniProt GO_REF:0000117 NCBI chr 3:163,598,531...163,601,027
Ensembl chr 3:163,598,840...163,601,002
JBrowse link
G Eef1a2 eukaryotic translation elongation factor 1 alpha 2 involved_in IDA
IEA
IMP
PMID:23839781
GO_REF:0000117
UniProt PMID:23839781 PMID:23839781 GO_REF:0000117, RGD:405650375, RGD:405650375 NCBI chr 3:188,643,455...188,652,633
Ensembl chr 3:188,643,458...188,677,712
JBrowse link
G Gap43 growth associated protein 43 involved_in IDA
IMP
PMID:25755278 SynGO PMID:25755278 PMID:25755278 RGD:13702431, RGD:13702431 NCBI chr11:71,882,131...71,975,799
Ensembl chr11:71,882,131...71,975,797
JBrowse link
G Nptxr neuronal pentraxin receptor involved_in ISO (PMID:27986928) RGD PMID:27986928 NCBI chr 7:113,217,046...113,235,122
Ensembl chr 7:113,217,050...113,235,156
JBrowse link
G Nrxn1 neurexin 1 involved_in IEA
ISO
GO_REF:0000107
(PMID:15620359)
Ensembl
RGD
PMID:15620359 GO_REF:0000107 NCBI chr 6:8,931,360...10,077,381
Ensembl chr 6:8,935,523...10,077,374
JBrowse link
G Sptbn2 spectrin, beta, non-erythrocytic 2 involved_in IEA
ISO
GO_REF:0000107
(PMID:28576936)
Ensembl
RGD
PMID:28576936 GO_REF:0000107 NCBI chr 1:211,432,373...211,473,016
Ensembl chr 1:211,432,373...211,473,306
JBrowse link
G Wnt5a Wnt family member 5A involved_in IDA
IEP
IMP
PMID:19332546 SynGO PMID:19332546 PMID:19332546 PMID:19332546 RGD:155230776, RGD:155230776, RGD:155230776 NCBI chr16:3,702,300...3,724,860
Ensembl chr16:3,703,665...3,724,860
JBrowse link
regulation of presynapse assembly term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G App amyloid beta precursor protein involved_in ISO
IEA
(PMID:19726636)
GO_REF:0000107
RGD
Ensembl
PMID:19726636 GO_REF:0000107 NCBI chr11:37,506,207...37,724,351
Ensembl chr11:37,506,408...37,722,971
JBrowse link
G Arf6 ARF GTPase 6 involved_in IMP
IDA
PMID:16672654 SynGO PMID:16672654 PMID:16672654 RGD:8554141, RGD:8554141 NCBI chr 6:93,589,777...93,590,925
Ensembl chr 6:93,569,234...93,610,536
JBrowse link
G Cbln1 cerebellin 1 precursor involved_in IEA
ISO
GO_REF:0000107
(PMID:20395510), (PMID:21410790)
Ensembl
RGD
PMID:20395510 PMID:21410790 GO_REF:0000107 NCBI chr19:35,782,151...35,785,960
Ensembl chr19:35,781,952...35,785,960
JBrowse link
G Clstn3 calsyntenin 3 involved_in IEA
ISO
GO_REF:0000107
(PMID:24613359)
Ensembl
RGD
PMID:24613359 GO_REF:0000107 NCBI chr 4:159,017,795...159,051,069
Ensembl chr 4:159,017,795...159,051,069
JBrowse link
G Eif4g1 eukaryotic translation initiation factor 4 gamma 1 involved_in ISO UniProtKB:Q21053 (PMID:25533483) RGD PMID:25533483 NCBI chr11:93,726,322...93,746,387
Ensembl chr11:93,726,322...93,746,367
JBrowse link
G Farp1 FERM, ARH/RhoGEF and pleckstrin domain protein 1 involved_in IMP
IDA
PMID:23209303 SynGO PMID:23209303 PMID:23209303 RGD:8554251, RGD:8554251 NCBI chr15:104,531,196...104,770,148
Ensembl chr15:104,531,813...104,770,147
JBrowse link
G Fzd1 frizzled class receptor 1 involved_in ISO (PMID:19883499) RGD PMID:19883499 NCBI chr 4:30,265,074...30,269,472
Ensembl chr 4:30,247,228...30,833,176
JBrowse link
G Gpc4 glypican 4 involved_in IDA
IBA
IMP
PMID:23911103
GO_REF:0000033
GO_Central PMID:23911103 PMID:23911103 GO_REF:0000033, RGD:13702303, RGD:13702303 NCBI chr  X:136,565,536...136,676,142
Ensembl chr  X:136,565,591...136,676,057
JBrowse link
G Grid2 glutamate ionotropic receptor delta type subunit 2 involved_in IDA
IMP
PMID:21410790
PMID:20395510
SynGO PMID:21410790 PMID:21410790 PMID:20395510 PMID:20395510 RGD:13702257, RGD:13702257, RGD:13702347, RGD:13702347 NCBI chr 4:93,745,165...95,222,354
Ensembl chr 4:93,745,277...95,219,868
JBrowse link
G Igsf11 immunoglobulin superfamily, member 11 involved_in ISO (PMID:34261648) RGD PMID:34261648 NCBI chr11:75,238,706...75,389,748
Ensembl chr11:75,236,545...75,390,425
JBrowse link
G Il1rap interleukin 1 receptor accessory protein involved_in ISO (PMID:22357843) RGD PMID:22357843 NCBI chr11:87,567,813...87,704,346
Ensembl chr11:87,575,116...87,704,342
JBrowse link
G Il1rapl1 interleukin 1 receptor accessory protein-like 1 involved_in IEA
ISO
GO_REF:0000107
(PMID:21926414)
Ensembl
RGD
PMID:21926414 GO_REF:0000107 NCBI chr  X:55,322,779...56,827,486
Ensembl chr  X:55,328,964...56,826,613
JBrowse link
G Il1rapl2 interleukin 1 receptor accessory protein-like 2 involved_in ISO (PMID:21926414) RGD PMID:21926414 NCBI chr  X:105,547,403...107,080,369
Ensembl chr  X:105,754,490...107,065,223
JBrowse link
G Lrfn3 leucine rich repeat and fibronectin type III domain containing 3 involved_in IMP
IDA
PMID:27480238 SynGO PMID:27480238 PMID:27480238 RGD:13702184, RGD:13702184 NCBI chr 1:94,744,315...94,751,001
Ensembl chr 1:94,744,321...94,751,178
JBrowse link
G Lrfn4 leucine rich repeat and fibronectin type III domain containing 4 involved_in IBA
ISO
IEA
GO_REF:0000033
(PMID:20410109)
GO_REF:0000107
GO_Central
RGD
Ensembl
PMID:20410109 GO_REF:0000033 GO_REF:0000107 NCBI chr 1:211,317,980...211,321,272
Ensembl chr 1:211,317,980...211,321,272
JBrowse link
G Lrfn5 leucine rich repeat and fibronectin type III domain containing 5 involved_in IBA
ISO
IEA
GO_REF:0000033
(PMID:20410109)
GO_REF:0000107
GO_Central
RGD
Ensembl
PMID:20410109 GO_REF:0000033 GO_REF:0000107 NCBI chr 6:85,201,465...85,557,872
Ensembl chr 6:85,201,364...85,558,539
JBrowse link
G Lrrc4b leucine rich repeat containing 4B involved_in IDA
IBA
IMP
PMID:19252495
GO_REF:0000033
GO_Central PMID:19252495 PMID:19252495 GO_REF:0000033, RGD:13702321, RGD:13702321 NCBI chr 1:104,058,558...104,092,831
Ensembl chr 1:104,072,128...104,093,298
JBrowse link
G Lrrtm1 leucine rich repeat transmembrane neuronal 1 involved_in IDA
IMP
PMID:19285470 SynGO PMID:19285470 PMID:19285470 RGD:8554788, RGD:8554788 NCBI chr 4:111,246,213...111,295,638
Ensembl chr 4:111,235,054...111,276,818
JBrowse link
G Lrrtm3 leucine rich repeat transmembrane neuronal 3 involved_in ISO (PMID:26776509) RGD PMID:26776509 NCBI chr20:24,514,304...24,688,322
Ensembl chr20:24,514,284...24,689,002
JBrowse link
G Mdga1 MAM domain containing glycosylphosphatidylinositol anchor 1 involved_in ISO (PMID:28641112) RGD PMID:28641112 NCBI chr20:7,901,856...7,965,834
Ensembl chr20:7,901,856...7,965,834
JBrowse link
G Mdga2 MAM domain containing glycosylphosphatidylinositol anchor 2 involved_in ISO (PMID:27608760) RGD PMID:27608760 NCBI chr 6:90,482,687...91,346,784
Ensembl chr 6:90,498,119...91,344,413
JBrowse link
G Nlgn2 neuroligin 2 involved_in IMP
IDA
PMID:10892652 SynGO PMID:10892652 PMID:10892652 RGD:13702379, RGD:13702379 NCBI chr10:55,042,175...55,056,578
Ensembl chr10:55,043,185...55,056,578
JBrowse link
G Nrg1 neuregulin 1 involved_in ISO (PMID:20393464) RGD PMID:20393464 NCBI chr16:65,954,084...67,007,484
Ensembl chr16:65,953,865...66,999,849
JBrowse link
G Nrxn1 neurexin 1 involved_in IEA
ISO
GO_REF:0000107
(PMID:17360903)
Ensembl
RGD
PMID:17360903 GO_REF:0000107 NCBI chr 6:8,931,360...10,077,381
Ensembl chr 6:8,935,523...10,077,374
JBrowse link
G Ntng2 netrin G2 involved_in IEA
ISO
GO_REF:0000107
(PMID:16980967)
Ensembl
RGD
PMID:16980967 GO_REF:0000107 NCBI chr 3:32,889,856...32,949,032
Ensembl chr 3:32,890,575...32,943,821
JBrowse link
G Ntrk3 neurotrophic receptor tyrosine kinase 3 involved_in IDA
IMP
PMID:21262467 SynGO PMID:21262467 PMID:21262467 RGD:13702219, RGD:13702219 NCBI chr 1:141,526,192...141,913,575
Ensembl chr 1:141,542,569...141,913,004
JBrowse link
G Slitrk1 SLIT and NTRK-like family, member 1 involved_in ISO (PMID:23345436) RGD PMID:23345436 NCBI chr15:92,137,703...92,141,741
Ensembl chr15:92,135,994...92,142,105
JBrowse link
G Slitrk2 SLIT and NTRK-like family, member 2 involved_in ISO
IEA
(PMID:23345436)
GO_REF:0000107
RGD
Ensembl
PMID:23345436 GO_REF:0000107 NCBI chr  X:150,287,418...150,299,832
Ensembl chr  X:150,287,303...150,314,997
JBrowse link
G Slitrk3 SLIT and NTRK-like family, member 3 involved_in ISO (PMID:23345436)
(PMID:22286174)
RGD PMID:22286174 PMID:23345436 NCBI chr 2:159,983,650...159,996,194
Ensembl chr 2:159,973,029...159,996,342
JBrowse link
G Snca synuclein alpha involved_in ISO
IEA
UniProtKB:Q21053 (PMID:25533483)
GO_REF:0000107
RGD
Ensembl
PMID:25533483 GO_REF:0000107 NCBI chr 4:91,026,474...91,127,444
Ensembl chr 4:91,026,474...91,126,315
JBrowse link
G Wnt3a Wnt family member 3A involved_in ISO
IEA
(PMID:19883499)
GO_REF:0000107
RGD
Ensembl
PMID:19883499 GO_REF:0000107 NCBI chr10:44,533,734...44,577,919
Ensembl chr10:44,533,734...44,577,919
JBrowse link
G Wnt7a Wnt family member 7A involved_in ISO
IEA
(PMID:20530549)
GO_REF:0000107
RGD
Ensembl
PMID:20530549 GO_REF:0000107 NCBI chr 4:125,420,276...125,466,149
Ensembl chr 4:125,420,276...125,466,149
JBrowse link
regulation of synapse assembly term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Arhgap4 Rho GTPase activating protein 4 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr  X:156,787,566...156,802,841
Ensembl chr  X:156,783,776...156,802,450
JBrowse link
G Chd4 chromodomain helicase DNA binding protein 4 involved_in IDA
IMP
PMID:24991957 SynGO PMID:24991957 PMID:24991957 RGD:9587770, RGD:9587770 NCBI chr 4:159,584,623...159,617,867
Ensembl chr 4:159,584,654...159,617,866
JBrowse link
G Chrnb2 cholinergic receptor nicotinic beta 2 subunit acts_upstream_of_or_within ISO MGI:2158714 (PMID:17301182) RGD PMID:17301182 NCBI chr 2:177,479,091...177,487,306
Ensembl chr 2:177,479,091...177,491,326
JBrowse link
G Clstn3 calsyntenin 3 involved_in ISO (PMID:33101212) RGD PMID:33101212 NCBI chr 4:159,017,795...159,051,069
Ensembl chr 4:159,017,795...159,051,069
JBrowse link
G Crtac1 cartilage acidic protein 1 involved_in IEA
ISO
GO_REF:0000107
(PMID:33658590)
Ensembl
RGD
PMID:33658590 GO_REF:0000107 NCBI chr 1:251,040,963...251,182,920
Ensembl chr 1:251,028,143...251,182,689
JBrowse link
G Ctnnb1 catenin beta 1 involved_in IEA
ISO
GO_REF:0000107
(PMID:28641114)
Ensembl
RGD
PMID:28641114 GO_REF:0000107 NCBI chr 8:129,517,576...129,544,661
Ensembl chr 8:129,517,545...129,544,662
JBrowse link
G Elavl2 ELAV like RNA binding protein 2 involved_in IMP
IDA
PMID:24991957 SynGO PMID:24991957 PMID:24991957 RGD:9587770, RGD:9587770 NCBI chr 5:111,076,705...111,202,341
Ensembl chr 5:111,076,705...111,224,918
JBrowse link
G Ephb2 Eph receptor B2 involved_in IEA
ISO
GO_REF:0000107
(PMID:17122040)
Ensembl
RGD
PMID:17122040 GO_REF:0000107 NCBI chr 5:154,179,065...154,360,459
Ensembl chr 5:154,179,065...154,360,615
JBrowse link
G Exoc7 exocyst complex component 7 involved_in IDA
IMP
PMID:30374940 SynGO PMID:30374940 PMID:30374940 RGD:405650391, RGD:405650391 NCBI chr10:102,019,805...102,039,333
Ensembl chr10:102,019,806...102,039,447
JBrowse link
G Ghsr growth hormone secretagogue receptor acts_upstream_of_or_within IEA
ISO
GO_REF:0000107
MGI:3040440 (PMID:17060947)
Ensembl
RGD
PMID:17060947 GO_REF:0000107 NCBI chr 2:112,196,158...112,201,666
Ensembl chr 2:112,196,767...112,201,181
JBrowse link
G Grid2 glutamate ionotropic receptor delta type subunit 2 involved_in IEA GO_REF:0000117 UniProt GO_REF:0000117 NCBI chr 4:93,745,165...95,222,354
Ensembl chr 4:93,745,277...95,219,868
JBrowse link
G Grin1 glutamate ionotropic receptor NMDA type subunit 1 acts_upstream_of_or_within ISO MGI:2655232|MGI:2655237 (PMID:12657691) RGD PMID:12657691 NCBI chr 3:28,501,836...28,528,754
Ensembl chr 3:28,501,836...28,528,754
JBrowse link
G Icam5 intercellular adhesion molecule 5 involved_in IEA
ISO
GO_REF:0000107
(PMID:23015592)
Ensembl
RGD
PMID:23015592 GO_REF:0000107 NCBI chr 8:27,843,563...27,851,767
Ensembl chr 8:27,844,780...27,857,104
JBrowse link
G L1cam L1 cell adhesion molecule involved_in ISO (PMID:30846310) RGD PMID:30846310 NCBI chr  X:156,748,597...156,775,116
Ensembl chr  X:156,748,597...156,775,077
JBrowse link
G Lrrtm4 leucine rich repeat transmembrane neuronal 4 involved_in ISO (PMID:23911103) RGD PMID:23911103 NCBI chr 4:114,103,783...114,894,696
Ensembl chr 4:114,103,870...114,109,726
JBrowse link
G Mef2c myocyte enhancer factor 2C involved_in ISO (PMID:18599438) RGD PMID:18599438 NCBI chr 2:15,708,732...15,871,639
Ensembl chr 2:15,708,924...15,871,640
JBrowse link
G Nectin1 nectin cell adhesion molecule 1 IMP RGD PMID:11827984 RGD:1599809 NCBI chr 8:52,998,662...53,061,745
Ensembl chr 8:52,998,662...53,086,664
JBrowse link
G Negr1 neuronal growth regulator 1 IMP RGD PMID:18602091 RGD:40886282 NCBI chr 2:248,283,164...249,015,538
Ensembl chr 2:248,283,353...249,018,410
JBrowse link
G Nrg2 neuregulin 2 involved_in IDA
IMP
PMID:26674872 SynGO PMID:26674872 PMID:26674872 RGD:11070025, RGD:11070025 NCBI chr18:27,890,578...28,072,538
Ensembl chr18:27,890,578...28,072,538
JBrowse link
G Ntn1 netrin 1 involved_in ISO (PMID:24174661) RGD PMID:24174661 NCBI chr10:53,398,852...53,597,595
Ensembl chr10:53,398,852...53,584,060
JBrowse link
G Ogt O-linked N-acetylglucosamine (GlcNAc) transferase involved_in IEA
ISO
GO_REF:0000107
(PMID:28143929)
Ensembl
RGD
PMID:28143929 GO_REF:0000107 NCBI chr  X:70,811,317...70,856,123
Ensembl chr  X:70,811,319...70,856,123
JBrowse link
G Pdlim5 PDZ and LIM domain 5 involved_in IDA PMID:19900557 UniProt PMID:19900557 RGD:8554803 NCBI chr 2:233,625,478...233,793,582
Ensembl chr 2:233,628,503...233,793,528
JBrowse link
G Podxl podocalyxin-like involved_in ISO (PMID:20706633) RGD PMID:20706633 NCBI chr 4:61,102,434...61,149,131
Ensembl chr 4:61,102,419...61,149,789
JBrowse link
G Ppp1r9a protein phosphatase 1, regulatory subunit 9A IMP RGD PMID:15473970 RGD:10043779 NCBI chr 4:33,936,949...34,258,927
Ensembl chr 4:33,988,827...34,258,927
JBrowse link
G Rab17 RAB17, member RAS oncogene family involved_in IEA
ISO
GO_REF:0000107
(PMID:22291024)
Ensembl
RGD
PMID:22291024 GO_REF:0000107 NCBI chr 9:99,001,044...99,014,340
Ensembl chr 9:99,001,045...99,014,032
JBrowse link
G Rap2a RAP2A, member of RAS oncogene family involved_in ISO (PMID:30063210) RGD PMID:30063210 NCBI chr15:104,003,744...104,004,234 JBrowse link
G Rtn4r reticulon 4 receptor involved_in ISO (PMID:26838771) RGD PMID:26838771 NCBI chr11:96,348,613...96,373,554
Ensembl chr11:96,348,502...96,373,554
JBrowse link
G Sdc2 syndecan 2 involved_in IDA
IMP
PMID:17548511 SynGO PMID:17548511 PMID:17548511 RGD:405650239, RGD:405650239 NCBI chr 7:66,012,405...66,125,101
Ensembl chr 7:66,108,853...66,126,294
JBrowse link
G Sema4d semaphorin 4D involved_in IEA
ISO
GO_REF:0000107
(PMID:24036351)
Ensembl
RGD
PMID:24036351 GO_REF:0000107 NCBI chr17:13,582,085...13,688,889
Ensembl chr17:13,582,098...13,688,891
JBrowse link
G Setd5 SET domain containing 5 involved_in IEA
ISO
GO_REF:0000107
(PMID:31515109)
Ensembl
RGD
PMID:31515109 GO_REF:0000107 NCBI chr 4:147,772,955...147,850,669
Ensembl chr 4:147,773,028...147,850,667
JBrowse link
G Snap25 synaptosome associated protein 25 IEP RGD PMID:15478103 RGD:1581079 NCBI chr 3:144,494,579...144,576,449
Ensembl chr 3:144,494,595...144,576,448
JBrowse link
G Srcin1 SRC kinase signaling inhibitor 1 involved_in ISO (PMID:28641114) RGD PMID:28641114 NCBI chr10:82,999,295...83,066,359
Ensembl chr10:82,991,033...83,067,419
JBrowse link
G Srgap1 SLIT-ROBO Rho GTPase activating protein 1 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr 7:59,215,007...59,479,600
Ensembl chr 7:59,215,007...59,656,213
JBrowse link
G Srgap2 SLIT-ROBO Rho GTPase activating protein 2 involved_in IEA
ISO
IBA
GO_REF:0000107
(PMID:22559944)
GO_REF:0000033
Ensembl
RGD
GO_Central
PMID:22559944 GO_REF:0000033 GO_REF:0000107 NCBI chr13:45,298,192...45,519,330
Ensembl chr13:45,298,192...45,519,330
JBrowse link
G Srgap3 SLIT-ROBO Rho GTPase activating protein 3 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr 4:147,391,082...147,626,407
Ensembl chr 4:147,395,880...147,625,713
JBrowse link
G Srpx2 sushi-repeat-containing protein, X-linked 2 involved_in IDA
IMP
PMID:24179158 SynGO PMID:24179158 PMID:24179158 RGD:8553698, RGD:8553698 NCBI chr  X:101,399,748...101,425,486
Ensembl chr  X:101,399,853...101,425,484
JBrowse link
G Vldlr very low density lipoprotein receptor involved_in IEA
ISO
GO_REF:0000107
(PMID:25644714)
Ensembl
RGD
PMID:25644714 GO_REF:0000107 NCBI chr 1:234,239,769...234,272,150
Ensembl chr 1:234,240,121...234,272,154
JBrowse link
regulation of synaptic assembly at neuromuscular junction term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Agrn agrin acts_upstream_of_or_within IEA GO_REF:0000107 Ensembl GO_REF:0000107 NCBI chr 5:172,031,528...172,064,429
Ensembl chr 5:172,031,528...172,064,539
JBrowse link
G Colq collagen like tail subunit of asymmetric acetylcholinesterase acts_upstream_of_or_within IEA
ISO
GO_REF:0000107
MGI:1857733 (PMID:20053883)
Ensembl
RGD
PMID:20053883 GO_REF:0000107 NCBI chr16:6,738,251...6,830,492
Ensembl chr16:6,738,251...6,793,501
JBrowse link
G Lin7a lin-7 homolog A, crumbs cell polarity complex component involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr 7:44,473,568...44,629,074
Ensembl chr 7:44,473,347...44,625,208
JBrowse link
G Lin7b lin-7 homolog B, crumbs cell polarity complex component involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr 1:104,983,368...104,986,795
Ensembl chr 1:104,982,771...104,986,078
JBrowse link
G Lin7c lin-7 homolog C, crumbs cell polarity complex component involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr 3:116,859,425...116,872,363
Ensembl chr 3:116,860,282...116,872,363
JBrowse link
G Musk muscle associated receptor tyrosine kinase involved_in
acts_upstream_of_or_within
ISS
ISO
IEA
GO_REF:0000024
MGI:1929066 (PMID:8653786)
GO_REF:0000117
UniProt
RGD
PMID:8653786 GO_REF:0000024 GO_REF:0000117 NCBI chr 5:77,853,560...77,967,653
Ensembl chr 5:77,853,736...77,964,338
JBrowse link
G Mycbp2 MYC binding protein 2 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr15:86,352,061...86,590,126
Ensembl chr15:86,352,061...86,590,325
JBrowse link
G Six1 SIX homeobox 1 acts_upstream_of_or_within IEA
ISO
GO_REF:0000107
MGI:106034 (PMID:21884692)
Ensembl
RGD
PMID:21884692 GO_REF:0000107 NCBI chr 6:97,482,617...97,487,853
Ensembl chr 6:97,482,617...97,487,853
JBrowse link
G Six4 SIX homeobox 4 acts_upstream_of_or_within ISO MGI:102780 (PMID:21884692) RGD PMID:21884692 NCBI chr 6:97,538,202...97,551,872
Ensembl chr 6:97,538,202...97,551,872
JBrowse link
synapse assembly involved in innervation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Fbxo45 F-box protein 45 involved_in
acts_upstream_of_or_within
IBA
ISO
IEA
GO_REF:0000033
MGI:3849742 (PMID:19398581)
GO_REF:0000107
GO_Central
RGD
Ensembl
PMID:19398581 GO_REF:0000033 GO_REF:0000107 NCBI chr11:82,056,457...82,072,080
Ensembl chr11:82,056,457...82,072,080
JBrowse link
G Lrit3 leucine-rich repeat, Ig-like and transmembrane domains 3 acts_upstream_of_or_within IEA
ISO
GO_REF:0000107
(PMID:25997951)
Ensembl
RGD
PMID:25997951 GO_REF:0000107 NCBI chr 2:221,011,458...221,034,568
Ensembl chr 2:221,011,595...221,031,747
JBrowse link
synaptic assembly at neuromuscular junction term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G App amyloid beta precursor protein acts_upstream_of_or_within ISO MGI:88047 (PMID:15689559) RGD PMID:15689559 NCBI chr11:37,506,207...37,724,351
Ensembl chr11:37,506,408...37,722,971
JBrowse link
G Dag1 dystroglycan 1 involved_in ISO (PMID:11157973) RGD PMID:11157973 NCBI chr 8:117,769,517...117,834,347
Ensembl chr 8:117,769,517...117,782,199
JBrowse link
G Kcnj8 potassium inwardly-rectifying channel, subfamily J, member 8 acts_upstream_of_or_within IEA
ISO
GO_REF:0000107
(PMID:26142302)
Ensembl
RGD
PMID:26142302 GO_REF:0000107 NCBI chr 4:177,240,692...177,246,548
Ensembl chr 4:177,239,908...177,246,531
JBrowse link
G Large1 LARGE xylosyl- and glucuronyltransferase 1 acts_upstream_of_or_within IEA
ISO
GO_REF:0000107
MGI:1856965 (PMID:19346129)
Ensembl
RGD
PMID:19346129 GO_REF:0000107 NCBI chr19:11,609,004...12,057,174
Ensembl chr19:11,609,004...12,054,707
JBrowse link
G Lrp4 LDL receptor related protein 4 involved_in
acts_upstream_of_or_within
ISS
ISO
IEA
GO_REF:0000024
MGI:2661383|MGI:3580702 (PMID:17119023)
(PMID:18957220)
GO_REF:0000107
UniProt
RGD
Ensembl
PMID:17119023 PMID:18957220 GO_REF:0000024 GO_REF:0000107 NCBI chr 3:97,885,373...97,939,366
Ensembl chr 3:97,885,400...97,939,370
JBrowse link

Term paths to the root
Path 1
Term Annotations click to browse term
  biological_process 19315
    multicellular organismal process 9018
      multicellular organism development 5415
        system development 4702
          nervous system development 2924
            synapse assembly 327
              excitatory synapse assembly + 46
              inhibitory synapse assembly + 29
              negative regulation of synapse assembly + 15
              positive regulation of synapse assembly + 84
              postsynapse assembly + 112
              presynapse assembly + 52
              regulation of synapse assembly + 216
              synapse assembly involved in innervation 2
              synaptic assembly at neuromuscular junction + 15
Path 2
Term Annotations click to browse term
  biological_process 19315
    cellular process 18484
      cellular component organization or biogenesis 7050
        cellular component organization 6802
          cellular component assembly 3377
            cell junction assembly 581
              synapse assembly 327
                excitatory synapse assembly + 46
                inhibitory synapse assembly + 29
                negative regulation of synapse assembly + 15
                positive regulation of synapse assembly + 84
                postsynapse assembly + 112
                presynapse assembly + 52
                regulation of synapse assembly + 216
                synapse assembly involved in innervation 2
                synaptic assembly at neuromuscular junction + 15
paths to the root