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ONTOLOGY REPORT - ANNOTATIONS


Term:endoplasmic reticulum organization
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Accession:GO:0007029 term browser browse the term
Definition:A process that is carried out at the cellular level which results in the assembly, arrangement of constituent parts, or disassembly of the endoplasmic reticulum.
Synonyms:exact_synonym: ER organisation;   endoplasmic reticulum organisation
 related_synonym: ER organization and biogenesis;   endoplasmic reticulum morphology;   endoplasmic reticulum organization and biogenesis



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endoplasmic reticulum organization term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Atl1 atlastin GTPase 1 involved_in ISO
IBA
ISS
(PMID:19665976)
GO_REF:0000033
GO_REF:0000024
RGD
GO_Central
UniProt
PMID:19665976 GO_REF:0000024 GO_REF:0000033 NCBI chr 6:88,377,168...88,475,242 JBrowse link
G Atl2 atlastin GTPase 2 involved_in ISO
IBA
(PMID:18270207), (PMID:19665976)
GO_REF:0000033
RGD
GO_Central
PMID:18270207 PMID:19665976 GO_REF:0000033 NCBI chr 6:15,139,071...15,180,421 JBrowse link
G Atl3 atlastin GTPase 3 involved_in ISO
IBA
IEA
ISS
(PMID:18270207), (PMID:19665976)
GO_REF:0000033
GO_REF:0000107
GO_REF:0000024
RGD
GO_Central
Ensembl
UniProt
PMID:18270207 PMID:19665976 GO_REF:0000024 GO_REF:0000033 GO_REF:0000107 NCBI chr 1:204,680,958...204,727,360 JBrowse link
G Bnip1 BCL2 interacting protein 1 involved_in ISO
ISS
(PMID:15272311)
GO_REF:0000024
RGD
HGNC-UCL
PMID:15272311 GO_REF:0000024 NCBI chr10:16,386,876...16,399,124 JBrowse link
G Cacna1s calcium voltage-gated channel subunit alpha1 S involved_in
acts_upstream_of_or_within
IEA
ISO
GO_REF:0000107
MGI:1856326 (PMID:5041196)
Ensembl
RGD
PMID:5041196 GO_REF:0000107 NCBI chr13:47,493,949...47,564,194 JBrowse link
G Casq1 calsequestrin 1 acts_upstream_of_or_within ISO MGI:3530841 (PMID:17627988) RGD PMID:17627988 NCBI chr13:84,670,648...84,680,339 JBrowse link
G Cav2 caveolin 2 involved_in
acts_upstream_of_or_within
ISS
ISO
IEA
GO_REF:0000024
MGI:2180372 (PMID:17200204)
GO_REF:0000107
UniProt
RGD
Ensembl
PMID:17200204 GO_REF:0000024 GO_REF:0000107 NCBI chr 4:46,582,681...46,590,058 JBrowse link
G Ccdc47 coiled-coil domain containing 47 acts_upstream_of_or_within ISO MGI:3722141 (PMID:25009997) RGD PMID:25009997 NCBI chr10:91,630,101...91,648,626 JBrowse link
G Cert1 ceramide transporter 1 acts_upstream_of_or_within ISO MGI:3837565 (PMID:19139267) RGD PMID:19139267 NCBI chr 2:29,617,202...29,721,734 JBrowse link
G Dnm1l dynamin 1-like NOT|involved_in ISO (PMID:11514614) RGD PMID:11514614 NCBI chr11:98,084,049...98,135,663 JBrowse link
G Eif2ak3 eukaryotic translation initiation factor 2 alpha kinase 3 acts_upstream_of_or_within ISO MGI:2177666 (PMID:11430819) RGD PMID:11430819 NCBI chr 4:104,363,838...104,425,271 JBrowse link
G Gak cyclin G associated kinase acts_upstream_of_or_within ISO MGI:2176228|MGI:5305733 (PMID:18434600) RGD PMID:18434600 NCBI chr14:1,234,272...1,308,492 JBrowse link
G Htt huntingtin acts_upstream_of_or_within ISO (PMID:16256944) RGD PMID:16256944 NCBI chr14:75,845,836...75,996,094 JBrowse link
G Jagn1 jagunal homolog 1 involved_in IEA
IBA
GO_REF:0000002
GO_REF:0000033
InterPro
GO_Central
GO_REF:0000002 GO_REF:0000033 NCBI chr 4:146,591,577...146,596,287 JBrowse link
G Lman1 lectin, mannose-binding, 1 involved_in
acts_upstream_of_or_within
IEA
ISO
GO_REF:0000107
MGI:4123879 (PMID:21795745)
Ensembl
RGD
PMID:21795745 GO_REF:0000107 NCBI chr18:59,508,996...59,530,873 JBrowse link
G Lnpk lunapark, ER junction formation factor involved_in ISO (PMID:30032983) RGD PMID:30032983 NCBI chr 3:59,418,872...59,487,029 JBrowse link
G Lrrk2 leucine-rich repeat kinase 2 involved_in ISO
IBA
(PMID:25201882)
GO_REF:0000033
RGD
GO_Central
PMID:25201882 GO_REF:0000033 NCBI chr 7:124,706,246...124,867,234 JBrowse link
G Mapk15 mitogen-activated protein kinase 15 involved_in ISO
IEA
ISS
(PMID:21847093)
GO_REF:0000107
GO_REF:0000024
RGD
Ensembl
UniProt
PMID:21847093 GO_REF:0000024 GO_REF:0000107 NCBI chr 7:109,575,619...109,595,339 JBrowse link
G Mia3 MIA SH3 domain ER export factor 3 involved_in ISO (PMID:28442536) RGD PMID:28442536 NCBI chr13:94,970,421...95,012,071 JBrowse link
G Pex5 peroxisomal biogenesis factor 5 acts_upstream_of_or_within
involved_in
ISO
IEA
MGI:2176228|MGI:2384516 (PMID:15732085)
GO_REF:0000107
RGD
Ensembl
PMID:15732085 GO_REF:0000107 NCBI chr 4:157,270,671...157,296,432 JBrowse link
G Retreg1 reticulophagy regulator 1 acts_upstream_of_or_within ISO (PMID:34338405) RGD PMID:34338405 NCBI chr 2:76,335,609...76,474,817 JBrowse link
G Retreg2 reticulophagy regulator family member 2 involved_in
acts_upstream_of_or_within
IEA
ISO
GO_REF:0000107
(PMID:34338405)
Ensembl
RGD
PMID:34338405 GO_REF:0000107 NCBI chr 9:76,640,282...76,646,400 JBrowse link
G Retreg3 reticulophagy regulator family member 3 acts_upstream_of_or_within ISO (PMID:34338405) RGD PMID:34338405 NCBI chr10:86,028,767...86,052,575 JBrowse link
G Rnf112 ring finger protein 112 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr10:46,620,602...46,655,745 JBrowse link
G Rtn4 reticulon 4 involved_in ISO (PMID:27786289) RGD PMID:27786289 NCBI chr14:103,450,074...103,497,687 JBrowse link
G Sec16a SEC16 homolog A, endoplasmic reticulum export factor involved_in ISO (PMID:17428803), (PMID:21768384), (PMID:28442536) RGD PMID:17428803 PMID:21768384 PMID:28442536 NCBI chr 3:29,627,779...29,662,925 JBrowse link
G Sec16b SEC16 homolog B, endoplasmic reticulum export factor involved_in ISO (PMID:21768384) RGD PMID:21768384 NCBI chr13:69,665,757...69,727,199 JBrowse link
G Sec31a SEC31 homolog A, COPII coat complex component involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr14:9,518,655...9,573,579 JBrowse link
G Sec31b SEC31 homolog B, COPII coat complex component involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr 1:253,324,081...253,353,779 JBrowse link
G Sec61a1 SEC61 translocon subunit alpha 1 acts_upstream_of_or_within ISO (PMID:22375059) RGD PMID:22375059 NCBI chr 4:120,973,519...120,987,871 JBrowse link
G Smpd4 sphingomyelin phosphodiesterase 4 involved_in ISO (PMID:31495489) RGD PMID:31495489 NCBI chr11:83,362,534...83,386,257 JBrowse link
G Sptssb serine palmitoyltransferase, small subunit B acts_upstream_of_or_within ISO MGI:5689843 (PMID:26438849) RGD PMID:26438849 NCBI chr 2:154,133,728...154,162,127 JBrowse link
G Tmcc1 transmembrane and coiled-coil domain family 1 involved_in ISO (PMID:24454821) RGD PMID:24454821 NCBI chr 4:149,069,252...149,239,585 JBrowse link
G Tmed2 transmembrane p24 trafficking protein 2 acts_upstream_of_or_within ISO MGI:4456438 (PMID:30236446) RGD PMID:30236446 NCBI chr12:32,052,542...32,061,628 JBrowse link
G Tmem38a transmembrane protein 38a involved_in
acts_upstream_of_or_within
IEA
ISO
GO_REF:0000107
MGI:1098718 (PMID:17611541)
Ensembl
RGD
PMID:17611541 GO_REF:0000107 NCBI chr16:17,292,215...17,307,704 JBrowse link
G Tmem38b transmembrane protein 38B acts_upstream_of_or_within ISO MGI:1921416 (PMID:17611541), (PMID:27188440) RGD PMID:17611541 PMID:27188440 NCBI chr 5:68,460,304...68,496,026 JBrowse link
G Tor1aip2 torsin 1A interacting protein 2 involved_in ISO
IBA
ISS
(PMID:24275647)
GO_REF:0000033
GO_REF:0000024
RGD
GO_Central
UniProt
PMID:24275647 GO_REF:0000024 GO_REF:0000033 NCBI chr13:68,225,226...68,256,536 JBrowse link
G Tor1b torsin family 1, member B involved_in ISO (PMID:24275647) RGD PMID:24275647 NCBI chr 3:14,243,181...14,249,279 JBrowse link
G Umod uromodulin acts_upstream_of_or_within ISO (PMID:28437467) RGD PMID:28437467 NCBI chr 1:183,247,676...183,261,665 JBrowse link
G Use1 unconventional SNARE in the ER 1 acts_upstream_of_or_within ISO MGI:2176173|MGI:3842569 (PMID:19188447) RGD PMID:19188447 NCBI chr16:18,038,284...18,041,826 JBrowse link
G Vapa VAMP associated protein A NOT|involved_in ISO (PMID:18713837) RGD PMID:18713837 NCBI chr 9:105,177,904...105,208,400 JBrowse link
G Vapb VAMP associated protein B and C involved_in ISO (PMID:18713837) RGD PMID:18713837 NCBI chr 3:162,535,974...162,578,747 JBrowse link
endoplasmic reticulum localization term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Myo5a myosin VA acts_upstream_of_or_within ISO MGI:1856005|MGI:1858520 (PMID:10749990), (PMID:8899740) RGD PMID:8899740 PMID:10749990 NCBI chr 8:84,692,524...84,860,564 JBrowse link
G Tle6 TLE family member 6, subcortical maternal complex member involved_in ISO (PMID:28992324) RGD PMID:28992324 NCBI chr 7:8,107,050...8,118,639 JBrowse link
G Zbed3 zinc finger, BED-type containing 3 involved_in ISO (PMID:28992324) RGD PMID:28992324 NCBI chr 2:26,587,620...26,600,177 JBrowse link
endoplasmic reticulum membrane fusion term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Bnip1 BCL2 interacting protein 1 involved_in ISO
IEA
ISS
(PMID:15272311)
GO_REF:0000107
GO_REF:0000024
RGD
Ensembl
HGNC-UCL
PMID:15272311 GO_REF:0000024 GO_REF:0000107 NCBI chr10:16,386,876...16,399,124 JBrowse link
G Vcpip1 valosin containing protein interacting protein 1 involved_in IDA
IBA
GO_REF:0000033 GO_Central
RGD
PMID:12473691 GO_REF:0000033, RGD:1299500 NCBI chr 5:9,534,247...9,560,889 JBrowse link
endoplasmic reticulum membrane organization term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Lpcat3 lysophosphatidylcholine acyltransferase 3 involved_in ISS
ISO
GO_REF:0000024
(PMID:28846071)
UniProt
RGD
PMID:28846071 GO_REF:0000024 NCBI chr 4:157,468,397...157,509,889 JBrowse link
G Reep5 receptor accessory protein 5 involved_in ISS
ISO
GO_REF:0000024
(PMID:32075961)
UniProt
RGD
PMID:32075961 GO_REF:0000024 NCBI chr18:25,945,375...25,983,271 JBrowse link
G Steep1 STING1 ER exit protein 1 involved_in ISO
IBA
(PMID:32690950)
GO_REF:0000033
RGD
GO_Central
PMID:32690950 GO_REF:0000033 NCBI chr  X:116,087,626...116,114,159 JBrowse link
G Stx18 syntaxin 18 involved_in ISO
IEA
(PMID:19401338)
GO_REF:0000107
RGD
Ensembl
PMID:19401338 GO_REF:0000107 NCBI chr14:72,670,683...72,761,423 JBrowse link
G Tmed2 transmembrane p24 trafficking protein 2 involved_in
acts_upstream_of_or_within
IEA
ISO
GO_REF:0000107
MGI:4456438 (PMID:28797121)
Ensembl
RGD
PMID:28797121 GO_REF:0000107 NCBI chr12:32,052,542...32,061,628 JBrowse link
G Trdn triadin IMP RGD PMID:22505613 RGD:7327226 NCBI chr 1:23,955,651...24,410,494 JBrowse link
G Vapb VAMP associated protein B and C involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr 3:162,535,974...162,578,747 JBrowse link
endoplasmic reticulum polarization term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Shtn1 shootin 1 involved_in ISS
ISO
IEA
GO_REF:0000024
(PMID:23864681)
GO_REF:0000107
UniProt
RGD
Ensembl
PMID:23864681 GO_REF:0000024 GO_REF:0000107 NCBI chr 1:268,108,095...268,211,947 JBrowse link
endoplasmic reticulum tubular network formation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Arl6ip1 ARL6 interacting reticulophagy regulator 1 involved_in ISO (PMID:24262037) RGD PMID:24262037 NCBI chr 1:181,864,717...181,874,232 JBrowse link
G Rtn1 reticulon 1 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr 6:96,499,137...96,719,340 JBrowse link
G Rtn2 reticulon 2 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr 1:78,935,056...78,948,069 JBrowse link
G Rtn3 reticulon 3 involved_in ISO
IBA
IEA
(PMID:25612671)
(PMID:24262037)
GO_REF:0000033
GO_REF:0000107
RGD
GO_Central
Ensembl
PMID:24262037 PMID:25612671 GO_REF:0000033 GO_REF:0000107 NCBI chr 1:204,612,675...204,669,212 JBrowse link
G Rtn4 reticulon 4 involved_in ISO
IBA
ISS
IEA
(PMID:24262037), (PMID:25612671)
GO_REF:0000033
GO_REF:0000024
GO_REF:0000107
RGD
GO_Central
UniProt
Ensembl
PMID:24262037 PMID:25612671 GO_REF:0000024 GO_REF:0000033 GO_REF:0000107 NCBI chr14:103,450,074...103,497,687 JBrowse link
G Zfyve27 zinc finger FYVE-type containing 27 involved_in ISO
IBA
IEA
ISS
(PMID:23969831), (PMID:24668814)
GO_REF:0000033
GO_REF:0000107
GO_REF:0000002
GO_REF:0000024
RGD
GO_Central
Ensembl
InterPro
UniProt
PMID:23969831 PMID:24668814 GO_REF:0000002 GO_REF:0000024 GO_REF:0000033 GO_REF:0000107 NCBI chr 1:240,979,831...241,003,193 JBrowse link
endoplasmic reticulum tubular network maintenance term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Lnpk lunapark, ER junction formation factor involved_in ISO (PMID:25548161), (PMID:27619977) RGD PMID:25548161 PMID:27619977 NCBI chr 3:59,418,872...59,487,029 JBrowse link
endoplasmic reticulum tubular network membrane organization term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Arl6ip1 ARL6 interacting reticulophagy regulator 1 involved_in ISO (PMID:24262037) RGD PMID:24262037 NCBI chr 1:181,864,717...181,874,232 JBrowse link
G Atl1 atlastin GTPase 1 involved_in ISS
ISO
GO_REF:0000024
(PMID:27619977)
UniProt
RGD
PMID:27619977 GO_REF:0000024 NCBI chr 6:88,377,168...88,475,242 JBrowse link
G Atl2 atlastin GTPase 2 involved_in ISO (PMID:27619977) RGD PMID:27619977 NCBI chr 6:15,139,071...15,180,421 JBrowse link
G Rtn4 reticulon 4 involved_in IEA
ISS
ISO
GO_REF:0000107
GO_REF:0000024
(PMID:27619977)
Ensembl
UniProt
RGD
PMID:27619977 GO_REF:0000024 GO_REF:0000107 NCBI chr14:103,450,074...103,497,687 JBrowse link
endoplasmic reticulum tubular network organization term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Dmtn dematin actin binding protein involved_in ISO (PMID:23060452) RGD PMID:23060452 NCBI chr15:45,677,974...45,702,261 JBrowse link
G Lnpk lunapark, ER junction formation factor involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr 3:59,418,872...59,487,029 JBrowse link
G Rab10 RAB10, member RAS oncogene family involved_in ISS
IEA
ISO
GO_REF:0000024
GO_REF:0000107
(PMID:23263280), (PMID:24891604)
UniProt
Ensembl
RGD
PMID:23263280 PMID:24891604 GO_REF:0000024 GO_REF:0000107 NCBI chr 6:31,974,858...32,039,554 JBrowse link
G Rab18 RAB18, member RAS oncogene family involved_in ISO (PMID:24891604) RGD PMID:24891604 NCBI chr17:54,944,099...54,976,093 JBrowse link
G Reep1 receptor accessory protein 1 involved_in ISO
IBA
(PMID:20200447)
GO_REF:0000033
RGD
GO_Central
PMID:20200447 GO_REF:0000033 NCBI chr 4:105,303,974...105,420,611 JBrowse link
G Reep2 receptor accessory protein 2 involved_in ISO
IBA
(PMID:24388663)
GO_REF:0000033
RGD
GO_Central
PMID:24388663 GO_REF:0000033 NCBI chr18:26,438,130...26,447,165 JBrowse link
G Reep3 receptor accessory protein 3 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr20:21,492,695...21,575,138 JBrowse link
G Reep4 receptor accessory protein 4 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr15:52,030,022...52,033,229 JBrowse link
G Retreg3 reticulophagy regulator family member 3 involved_in ISO (PMID:33826365) RGD PMID:33826365 NCBI chr10:86,028,767...86,052,575 JBrowse link
G Rtn3 reticulon 3 involved_in ISO (PMID:18779370) RGD PMID:18779370 NCBI chr 1:204,612,675...204,669,212 JBrowse link
G Rtn4 reticulon 4 involved_in ISO
ISS
(PMID:18779370), (PMID:26906412)
GO_REF:0000024
RGD
UniProt
PMID:18779370 PMID:26906412 GO_REF:0000024 NCBI chr14:103,450,074...103,497,687 JBrowse link
G Tmem170a transmembrane protein 170A involved_in ISO (PMID:26906412) RGD PMID:26906412 NCBI chr19:56,743,221...56,756,085 JBrowse link
G Tmem33 transmembrane protein 33 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr14:40,888,485...40,910,715 JBrowse link
G Use1 unconventional SNARE in the ER 1 acts_upstream_of_or_within ISO MGI:3842569|MGI:3842571 (PMID:19188447) RGD PMID:19188447 NCBI chr16:18,038,284...18,041,826 JBrowse link
endoplasmic reticulum-plasma membrane tethering term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Esyt1 extended synaptotagmin 1 involved_in IEA GO_REF:0000002 InterPro GO_REF:0000002 NCBI chr 7:928,848...946,199 JBrowse link
G Esyt2 extended synaptotagmin 2 involved_in IEA GO_REF:0000002 InterPro GO_REF:0000002 NCBI chr 6:137,219,653...137,312,590 JBrowse link
G Esyt3 extended synaptotagmin 3 involved_in IEA GO_REF:0000002 InterPro GO_REF:0000002 NCBI chr 8:99,870,418...99,917,298 JBrowse link
G Gramd2a GRAM domain containing 2A involved_in ISO
IBA
(PMID:29469807)
GO_REF:0000033
RGD
GO_Central
PMID:29469807 GO_REF:0000033 NCBI chr 8:60,079,744...60,117,788 JBrowse link
G Vapa VAMP associated protein A involved_in ISO (PMID:33124732) RGD PMID:33124732 NCBI chr 9:105,177,904...105,208,400 JBrowse link
G Vapb VAMP associated protein B and C involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr 3:162,535,974...162,578,747 JBrowse link
establishment of endoplasmic reticulum localization to postsynapse term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Myo5a myosin VA involved_in ISO (PMID:21151132) RGD PMID:21151132 NCBI chr 8:84,692,524...84,860,564 JBrowse link
maintenance of ER location term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Polr2m RNA polymerase II subunit M involved_in ISO
IBA
(PMID:14602821)
GO_REF:0000033
RGD
GO_Central
PMID:14602821 GO_REF:0000033 NCBI chr 8:72,131,992...72,139,423 JBrowse link
multi-pass transmembrane protein insertion into ER membrane term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ccdc47 coiled-coil domain containing 47 involved_in ISS
ISO
GO_REF:0000024
(PMID:36261528)
(PMID:36261522)
UniProt
RGD
PMID:36261522 PMID:36261528 GO_REF:0000024 NCBI chr10:91,630,101...91,648,626 JBrowse link
G Ncln nicalin involved_in IEA
ISO
ISS
GO_REF:0000107
(PMID:36261528)
(PMID:36261522)
GO_REF:0000024
Ensembl
RGD
UniProt
PMID:36261522 PMID:36261528 GO_REF:0000024 GO_REF:0000107 NCBI chr 7:8,211,978...8,221,938 JBrowse link
G Nomo1 Nodal modulator 1 involved_in ISO (PMID:36261522) RGD PMID:36261522 NCBI chr 1:96,505,460...96,556,280 JBrowse link
G Rab5if RAB5 interacting factor involved_in ISO (PMID:36261522)
(PMID:36261528)
RGD PMID:36261522 PMID:36261528 NCBI chr 3:145,357,990...145,368,012 JBrowse link
G Tmco1 transmembrane and coiled-coil domains 1 involved_in ISS
IEA
ISO
GO_REF:0000024
GO_REF:0000107
(PMID:36261528)
(PMID:36261522)
UniProt
Ensembl
RGD
PMID:36261522 PMID:36261528 GO_REF:0000024 GO_REF:0000107 NCBI chr13:81,993,172...82,016,496 JBrowse link
G Tmem147 transmembrane protein 147 involved_in ISS
IEA
ISO
GO_REF:0000024
GO_REF:0000107
(PMID:36261528)
(PMID:36261522)
UniProt
Ensembl
RGD
PMID:36261522 PMID:36261528 GO_REF:0000024 GO_REF:0000107 NCBI chr 1:85,977,028...85,978,848 JBrowse link
G Wdr83os WD repeat domain 83 opposite strand involved_in ISO (PMID:36261522)
(PMID:36261528)
RGD PMID:36261522 PMID:36261528 NCBI chr19:23,075,373...23,076,745 JBrowse link
positive regulation of endoplasmic reticulum tubular network organization term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Atl3 atlastin GTPase 3 involved_in ISS
IEA
ISO
GO_REF:0000024
GO_REF:0000107
(PMID:27619977)
UniProt
Ensembl
RGD
PMID:27619977 GO_REF:0000024 GO_REF:0000107 NCBI chr 1:204,680,958...204,727,360 JBrowse link
G Lnpk lunapark, ER junction formation factor involved_in ISO (PMID:24223779), (PMID:25404289) RGD PMID:24223779 PMID:25404289 NCBI chr 3:59,418,872...59,487,029 JBrowse link
G Rab3gap1 RAB3 GTPase activating protein catalytic subunit 1 involved_in ISO
IEA
ISS
(PMID:24891604)
GO_REF:0000107
GO_REF:0000024
RGD
Ensembl
ParkinsonsUK-UCL
PMID:24891604 GO_REF:0000024 GO_REF:0000107 NCBI chr13:39,355,698...39,429,154 JBrowse link
G Rab3gap2 RAB3 GTPase activating non-catalytic protein subunit 2 involved_in ISO
IEA
(PMID:24891604)
GO_REF:0000107
RGD
Ensembl
PMID:24891604 GO_REF:0000107 NCBI chr13:96,757,430...96,828,930 JBrowse link
protein insertion into ER membrane term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ccdc47 coiled-coil domain containing 47 involved_in ISO
ISS
(PMID:32814900)
GO_REF:0000024
RGD
UniProt
PMID:32814900 GO_REF:0000024 NCBI chr10:91,630,101...91,648,626 JBrowse link
G Get1 guided entry of tail-anchored proteins factor 1 involved_in ISO (PMID:31417168), (PMID:32187542) RGD PMID:31417168 PMID:32187542 NCBI chr11:35,438,555...35,460,156 JBrowse link
G Get4 guided entry of tail-anchored proteins factor 4 involved_in ISO
IBA
(PMID:32395830)
GO_REF:0000033
RGD
GO_Central
PMID:32395830 GO_REF:0000033 NCBI chr12:15,377,009...15,394,238 JBrowse link
G Sec61a1 SEC61 translocon subunit alpha 1 involved_in ISS
IEA
ISO
GO_REF:0000024
GO_REF:0000107
(PMID:8616892)
UniProt
Ensembl
RGD
PMID:8616892 GO_REF:0000024 GO_REF:0000107 NCBI chr 4:120,973,519...120,987,871 JBrowse link
G Tram1 translocation associated membrane protein 1 involved_in ISO
IBA
ISS
IEA
(PMID:8616892)
GO_REF:0000033
GO_REF:0000024
GO_REF:0000107
RGD
GO_Central
UniProt
Ensembl
PMID:8616892 GO_REF:0000024 GO_REF:0000033 GO_REF:0000107 NCBI chr 5:5,642,579...5,667,666 JBrowse link
G Tram2 translocation associated membrane protein 2 involved_in ISO
IBA
(PMID:27499293)
GO_REF:0000033
RGD
GO_Central
PMID:27499293 GO_REF:0000033 NCBI chr 9:23,419,204...23,498,745 JBrowse link
G Wdr83os WD repeat domain 83 opposite strand involved_in ISO (PMID:32814900) RGD PMID:32814900 NCBI chr19:23,075,373...23,076,745 JBrowse link
protein insertion into ER membrane by stop-transfer membrane-anchor sequence term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Emc1 ER membrane protein complex subunit 1 involved_in ISO (PMID:29242231), (PMID:29809151), (PMID:30415835) RGD PMID:29242231 PMID:29809151 PMID:30415835 NCBI chr 5:151,608,557...151,633,888 JBrowse link
G Emc10 ER membrane protein complex subunit 10 involved_in ISS
IEA
ISO
GO_REF:0000024
GO_REF:0000107
(PMID:29242231), (PMID:29809151), (PMID:30415835)
UniProt
Ensembl
RGD
PMID:29242231 PMID:29809151 PMID:30415835 GO_REF:0000024 GO_REF:0000107 NCBI chr 1:94,980,260...94,988,847 JBrowse link
G Emc2 ER membrane protein complex subunit 2 involved_in ISS
ISO
GO_REF:0000024
(PMID:29242231), (PMID:29809151), (PMID:30415835), (PMID:33964204)
UniProt
RGD
PMID:29242231 PMID:29809151 PMID:30415835 PMID:33964204 GO_REF:0000024 NCBI chr 7:74,587,196...74,624,163 JBrowse link
G Emc3 ER membrane protein complex subunit 3 involved_in ISS
ISO
GO_REF:0000024
(PMID:29242231), (PMID:29809151), (PMID:30415835)
UniProt
RGD
PMID:29242231 PMID:29809151 PMID:30415835 GO_REF:0000024 NCBI chr 4:146,663,065...146,678,976 JBrowse link
G Emc4 ER membrane protein complex subunit 4 involved_in ISO (PMID:29242231), (PMID:29809151), (PMID:30415835) RGD PMID:29242231 PMID:29809151 PMID:30415835 NCBI chr 3:99,169,711...99,174,730 JBrowse link
G Emc6 ER membrane protein complex subunit 6 involved_in ISO (PMID:29242231), (PMID:29809151), (PMID:30415835) RGD PMID:29242231 PMID:29809151 PMID:30415835 NCBI chr10:57,794,072...57,795,671 JBrowse link
G Emc7 ER membrane protein complex subunit 7 involved_in ISO (PMID:29242231), (PMID:29809151), (PMID:30415835) RGD PMID:29242231 PMID:29809151 PMID:30415835 NCBI chr 3:99,263,933...99,274,365 JBrowse link
G Emc8 ER membrane protein complex subunit 8 involved_in ISS
ISO
GO_REF:0000024
(PMID:29242231), (PMID:29809151), (PMID:30415835)
UniProt
RGD
PMID:29242231 PMID:29809151 PMID:30415835 GO_REF:0000024 NCBI chr19:48,708,304...48,721,626 JBrowse link
G Emc9 ER membrane protein complex subunit 9 involved_in ISS
ISO
GO_REF:0000024
(PMID:29242231), (PMID:29809151), (PMID:30415835)
UniProt
RGD
PMID:29242231 PMID:29809151 PMID:30415835 GO_REF:0000024 NCBI chr15:33,041,840...33,046,056 JBrowse link
G Mmgt1 membrane magnesium transporter 1 involved_in ISS
ISO
GO_REF:0000024
(PMID:29242231), (PMID:29809151), (PMID:30415835)
UniProt
RGD
PMID:29242231 PMID:29809151 PMID:30415835 GO_REF:0000024 NCBI chr  X:134,408,463...134,420,798 JBrowse link
G Wnk1 WNK lysine deficient protein kinase 1 involved_in IEA
ISO
ISS
GO_REF:0000107
(PMID:33964204)
GO_REF:0000024
Ensembl
RGD
UniProt
PMID:33964204 GO_REF:0000024 GO_REF:0000107 NCBI chr 4:154,800,590...154,926,147 JBrowse link
regulation of endoplasmic reticulum tubular network organization term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Arl6ip1 ARL6 interacting reticulophagy regulator 1 involved_in ISO (PMID:24262037) RGD PMID:24262037 NCBI chr 1:181,864,717...181,874,232 JBrowse link
G Tmem33 transmembrane protein 33 involved_in ISO
ISS
(PMID:25612671)
GO_REF:0000024
RGD
UniProt
PMID:25612671 GO_REF:0000024 NCBI chr14:40,888,485...40,910,715 JBrowse link
tail-anchored membrane protein insertion into ER membrane term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Bag6 BAG cochaperone 6 involved_in ISS
IEA
ISO
GO_REF:0000024
GO_REF:0000107
(PMID:20676083), (PMID:25535373)
UniProt
Ensembl
RGD
PMID:20676083 PMID:25535373 GO_REF:0000024 GO_REF:0000107 NCBI chr20:3,675,938...3,690,414 JBrowse link
G Camlg calcium modulating ligand involved_in ISO
IBA
IDA
(PMID:23041287), (PMID:27226539)
GO_REF:0000033
RGD
GO_Central
PMID:23041287 PMID:27226539 PMID:23041287 GO_REF:0000033, RGD:42721997 NCBI chr17:8,997,868...9,009,140 JBrowse link
G Emc1 ER membrane protein complex subunit 1 involved_in ISO (PMID:29242231) RGD PMID:29242231 NCBI chr 5:151,608,557...151,633,888 JBrowse link
G Emc10 ER membrane protein complex subunit 10 involved_in ISS
IEA
ISO
GO_REF:0000024
GO_REF:0000107
(PMID:29242231)
UniProt
Ensembl
RGD
PMID:29242231 GO_REF:0000024 GO_REF:0000107 NCBI chr 1:94,980,260...94,988,847 JBrowse link
G Emc2 ER membrane protein complex subunit 2 involved_in ISO
ISS
(PMID:29242231)
GO_REF:0000024
RGD
UniProt
PMID:29242231 GO_REF:0000024 NCBI chr 7:74,587,196...74,624,163 JBrowse link
G Emc3 ER membrane protein complex subunit 3 involved_in ISO
ISS
(PMID:29242231)
GO_REF:0000024
RGD
UniProt
PMID:29242231 GO_REF:0000024 NCBI chr 4:146,663,065...146,678,976 JBrowse link
G Emc4 ER membrane protein complex subunit 4 involved_in ISO (PMID:29242231) RGD PMID:29242231 NCBI chr 3:99,169,711...99,174,730 JBrowse link
G Emc6 ER membrane protein complex subunit 6 involved_in ISO (PMID:29242231), (PMID:34918864) RGD PMID:29242231 PMID:34918864 NCBI chr10:57,794,072...57,795,671 JBrowse link
G Emc7 ER membrane protein complex subunit 7 involved_in ISO (PMID:29242231) RGD PMID:29242231 NCBI chr 3:99,263,933...99,274,365 JBrowse link
G Emc8 ER membrane protein complex subunit 8 involved_in ISO
ISS
(PMID:29242231)
GO_REF:0000024
RGD
UniProt
PMID:29242231 GO_REF:0000024 NCBI chr19:48,708,304...48,721,626 JBrowse link
G Emc9 ER membrane protein complex subunit 9 involved_in ISO
ISS
(PMID:29242231)
GO_REF:0000024
RGD
UniProt
PMID:29242231 GO_REF:0000024 NCBI chr15:33,041,840...33,046,056 JBrowse link
G Get1 guided entry of tail-anchored proteins factor 1 involved_in ISO
IBA
IEA
IDA
(PMID:23041287), (PMID:27226539)
GO_REF:0000033
GO_REF:0000002
RGD
GO_Central
InterPro
PMID:23041287 PMID:27226539 PMID:23041287 GO_REF:0000002 GO_REF:0000033, RGD:42721997 NCBI chr11:35,438,555...35,460,156 JBrowse link
G Get3 guided entry of tail-anchored proteins factor 3, ATPase involved_in IDA
IBA
ISO
PMID:27226539
GO_REF:0000033
(PMID:23041287), (PMID:25535373), (PMID:31461301)
GO_Central
RGD
PMID:23041287 PMID:25535373 PMID:31461301 PMID:27226539 PMID:23041287 GO_REF:0000033, RGD:42721993, RGD:42721997 NCBI chr19:23,130,109...23,138,196 JBrowse link
G Get4 guided entry of tail-anchored proteins factor 4 involved_in ISO (PMID:20676083), (PMID:25535373) RGD PMID:20676083 PMID:25535373 NCBI chr12:15,377,009...15,394,238 JBrowse link
G Mmgt1 membrane magnesium transporter 1 involved_in ISS
ISO
GO_REF:0000024
(PMID:29242231), (PMID:34918864)
UniProt
RGD
PMID:29242231 PMID:34918864 GO_REF:0000024 NCBI chr  X:134,408,463...134,420,798 JBrowse link
G Sgta small glutamine rich tetratricopeptide repeat co-chaperone alpha involved_in ISS
IEA
ISO
GO_REF:0000024
GO_REF:0000107
(PMID:25535373)
UniProt
Ensembl
RGD
PMID:25535373 GO_REF:0000024 GO_REF:0000107 NCBI chr 7:8,653,681...8,670,460 JBrowse link
G Ubl4a ubiquitin-like 4A involved_in ISO
IBA
IEA
ISS
(PMID:20676083), (PMID:25535373)
GO_REF:0000033
GO_REF:0000107
GO_REF:0000024
RGD
GO_Central
Ensembl
UniProt
PMID:20676083 PMID:25535373 GO_REF:0000024 GO_REF:0000033 GO_REF:0000107 NCBI chr  X:152,151,242...152,154,094 JBrowse link

Term paths to the root
Path 1
Term Annotations click to browse term
  biological_process 20534
    cellular process 19523
      cellular component organization or biogenesis 7187
        cellular component organization 6903
          endomembrane system organization 580
            endoplasmic reticulum organization 99
              endoplasmic reticulum cisternal network organization + 0
              endoplasmic reticulum disassembly 0
              endoplasmic reticulum inheritance 0
              endoplasmic reticulum localization + 10
              endoplasmic reticulum membrane fusion 2
              endoplasmic reticulum membrane organization + 13
              endoplasmic reticulum polarization 1
              endoplasmic reticulum tubular network organization + 23
              protein insertion into ER membrane + 28
              vesicle fusion with endoplasmic reticulum + 0
paths to the root