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ONTOLOGY REPORT - ANNOTATIONS

Term:DNA damage response
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Accession:GO:0006974 term browser browse the term
Definition:Any process that results in a change in state or activity of a cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a stimulus indicating damage to its DNA from environmental insults or errors during metabolism.
Synonyms:exact_synonym: cellular DNA damage response;   cellular response to DNA damage stimulus;   response to genotoxic stress
 broad_synonym: response to DNA damage stimulus
 alt_id: GO:0034984


show annotations for term's descendants           Sort by:
DNA damage response term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ABL1 ABL proto-oncogene 1, non-receptor tyrosine kinase involved_in IEA Ensembl GO_REF:0000107 NCBI chr 9:101,834,189...102,005,811
Ensembl chr 9:130,484,333...130,652,941 		JBrowse link
G ABRAXAS1 abraxas 1, BRCA1 A complex subunit involved_in IEA UniProt GO_REF:0000043 NCBI chr 4:40,711,139...40,736,763
Ensembl chr 4:46,556,892...46,581,573 		JBrowse link
G ACER2 alkaline ceramidase 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 9:19,216,891...19,262,477
Ensembl chr 9:19,709,402...19,750,896 		JBrowse link
G AIM2 absent in melanoma 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 1:134,413,232...134,540,344
Ensembl chr 1:138,210,946...138,221,753 		JBrowse link
G AKT1 AKT serine/threonine kinase 1 involved_in ISO PMID:20605787 UniProt PMID:20605787 RGD:10402036 NCBI chr14:85,417,229...85,444,722
Ensembl chr14:105,208,128...105,236,756 		JBrowse link
G ALKBH1 alkB homolog 1, histone H2A dioxygenase involved_in IEA UniProt GO_REF:0000043 NCBI chr14:58,227,094...58,262,107
Ensembl chr14:77,428,033...77,462,905 		JBrowse link
G ALKBH7 alkB homolog 7 involved_in IEA Ensembl
InterPro		 GO_REF:0000002 GO_REF:0000107 NCBI chr19:5,393,317...5,395,886
Ensembl chr19:6,315,604...6,318,170 		JBrowse link
G ALKBH8 alkB homolog 8, tRNA methyltransferase involved_in IEA Ensembl GO_REF:0000107 NCBI chr11:102,390,687...102,456,357
Ensembl chr11:105,872,588...105,937,472 		JBrowse link
G ANKLE1 ankyrin repeat and LEM domain containing 1 involved_in
NOT|involved_in		 IEA
ISO		 (PMID:27010503) Ensembl
UniProt		 PMID:27010503 GO_REF:0000107 NCBI chr19:16,769,670...16,775,114
Ensembl chr19:17,744,570...17,750,070 		JBrowse link
G APBB1 amyloid beta precursor protein binding family B member 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr11:6,526,477...6,550,509
Ensembl chr11:6,209,812...6,225,972 		JBrowse link
G APC APC regulator of WNT signaling pathway involved_in IEA Ensembl GO_REF:0000107 NCBI chr 5:108,070,697...108,208,273
Ensembl chr 5:113,904,352...114,009,709 		JBrowse link
G APEX1 apurinic/apyrimidinic endodeoxyribonuclease 1 involved_in IEA UniProt GO_REF:0000043 NCBI chr14:1,329,745...1,332,315
Ensembl chr14:19,381,911...19,384,542 		JBrowse link
G APEX2 apurinic/apyrimidinic endodeoxyribonuclease 2 involved_in IEA UniProt GO_REF:0000043 NCBI chr  X:47,210,552...47,218,320
Ensembl chr  X:55,442,599...55,450,402 		JBrowse link
G APLF aprataxin and PNKP like factor involved_in IEA Ensembl
UniProt		 GO_REF:0000043 GO_REF:0000107 NCBI chr2A:68,509,314...68,629,192
Ensembl chr2A:69,632,459...69,744,611 		JBrowse link
G APTX aprataxin involved_in IEA UniProt GO_REF:0000043 NCBI chr 9:32,747,409...32,819,270
Ensembl chr 9:33,556,419...33,585,060 		JBrowse link
G ARMT1 acidic residue methyltransferase 1 involved_in IEA Ensembl
TreeGrafter		 GO_REF:0000107 GO_REF:0000118 NCBI chr 6:149,268,840...149,286,618
Ensembl chr 6:153,965,211...153,983,027 		JBrowse link
G ASH2L ASH2 like, histone lysine methyltransferase complex subunit acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr 8:37,408,151...37,442,080
Ensembl chr 8:34,583,265...34,618,183 		JBrowse link
G ATAD5 ATPase family AAA domain containing 5 acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr17:25,944,259...26,009,317
Ensembl chr17:25,436,195...25,496,242 		JBrowse link
G ATF2 activating transcription factor 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chr2B:62,348,245...62,444,428
Ensembl chr2B:179,799,365...179,895,007 		JBrowse link
G ATM ATM serine/threonine kinase involved_in
acts_upstream_of_or_within		 IEA
ISO		 UniProt
Ensembl
InterPro
RGD		 PMID:12915485 PMID:19151707 PMID:19557000 GO_REF:0000002 GO_REF:0000043 GO_REF:0000107 RGD:10053571 RGD:1599370 RGD:2316101 NCBI chr11:103,109,979...103,256,405
Ensembl chr11:106,584,228...106,727,041 		JBrowse link
G ATR ATR serine/threonine kinase involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:15983387) Ensembl
UniProt
MGI		 PMID:15983387 GO_REF:0000043 GO_REF:0000107 NCBI chr 3:139,482,606...139,612,274
Ensembl chr 3:147,075,185...147,196,261 		JBrowse link
G ATRX ATRX chromatin remodeler involved_in IEA UniProt GO_REF:0000043 NCBI chr  X:66,682,968...66,969,421
Ensembl chr  X:76,795,574...77,083,486 		JBrowse link
G BABAM1 BRISC and BRCA1 A complex member 1 involved_in IEA UniProt GO_REF:0000043 NCBI chr19:16,755,518...16,767,634
Ensembl chr19:17,729,568...17,742,447 		JBrowse link
G BABAM2 BRISC and BRCA1 A complex member 2 involved_in IEA Ensembl
UniProt		 GO_REF:0000043 GO_REF:0000107 NCBI chr2A:27,884,907...28,338,302
Ensembl chr2A:27,974,917...28,420,519 		JBrowse link
G BATF basic leucine zipper ATF-like transcription factor involved_in IEA Ensembl GO_REF:0000107 NCBI chr14:56,075,768...56,100,749
Ensembl chr14:74,919,115...74,943,652 		JBrowse link
G BAX BCL2 associated X, apoptosis regulator acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr19:45,955,926...45,962,870
Ensembl chr19:54,793,594...54,800,468 		JBrowse link
G BAZ1B bromodomain adjacent to zinc finger domain 1B involved_in IEA Ensembl
TreeGrafter		 GO_REF:0000107 GO_REF:0000118 Ensembl chr 7:80,594,626...80,675,709 JBrowse link
G BBC3 BCL2 binding component 3 involved_in IEA Ensembl GO_REF:0000107 NCBI chr19:44,203,517...44,215,860 JBrowse link
G BCCIP BRCA2 and CDKN1A interacting protein involved_in IEA Ensembl
UniProt		 GO_REF:0000043 GO_REF:0000107 NCBI chr10:122,384,665...122,414,636
Ensembl chr10:126,648,677...126,678,863 		JBrowse link
G BCL2 BCL2 apoptosis regulator involved_in IEA Ensembl GO_REF:0000107 NCBI chr18:56,481,212...56,679,012
Ensembl chr18:59,802,443...59,992,100 		JBrowse link
G BCL3 BCL3 transcription coactivator involved_in IEA Ensembl GO_REF:0000107 NCBI chr19:41,696,162...41,708,485
Ensembl chr19:50,304,171...50,313,005 		JBrowse link
G BCL6 BCL6 transcription repressor involved_in IEA Ensembl GO_REF:0000107 NCBI chr 3:184,748,135...184,772,375
Ensembl chr 3:193,308,296...193,332,124 		JBrowse link
G BCLAF1 BCL2 associated transcription factor 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 6:134,023,195...134,054,507
Ensembl chr 6:138,115,451...138,137,108 		JBrowse link
G BIVM basic, immunoglobulin-like variable motif containing involved_in IEA UniProt GO_REF:0000043 NCBI chr13:83,959,365...84,002,223
Ensembl chr13:103,096,344...103,174,182 		JBrowse link
G BLM BLM RecQ like helicase involved_in IEA Ensembl GO_REF:0000107 NCBI chr15:69,407,248...69,508,070
Ensembl chr15:88,607,157...88,707,864 		JBrowse link
G BOD1L1 biorientation of chromosomes in cell division 1 like 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 4:7,986,005...8,045,002
Ensembl chr 4:13,294,884...13,345,519 		JBrowse link
G BRAT1 BRCA1 associated ATM activator 1 involved_in IEA InterPro
TreeGrafter
Ensembl		 GO_REF:0000002 GO_REF:0000107 GO_REF:0000118 NCBI chr 7:2,797,551...2,815,847
Ensembl chr 7:2,892,302...2,910,143 		JBrowse link
G BRCA1 BRCA1 DNA repair associated involved_in
acts_upstream_of_or_within		 IEA UniProt
InterPro
Ensembl		 GO_REF:0000002 GO_REF:0000043 GO_REF:0000107 NCBI chr17:14,197,946...14,279,064
Ensembl chr17:14,428,526...14,506,815 		JBrowse link
G BRCA2 BRCA2 DNA repair associated involved_in IEA Ensembl
UniProt		 GO_REF:0000043 GO_REF:0000107 NCBI chr13:13,574,422...13,658,967
Ensembl chr13:32,010,066...32,091,332 		JBrowse link
G BRD4 bromodomain containing 4 involved_in ISO (PMID:23728299) UniProt PMID:23728299 NCBI chr19:14,768,239...14,805,770
Ensembl chr19:15,754,930...15,789,600 		JBrowse link
G BRSK1 BR serine/threonine kinase 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr19:52,326,538...52,355,060
Ensembl chr19:61,021,493...61,045,659 		JBrowse link
G BTG2 BTG anti-proliferation factor 2 acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr 1:178,907,317...178,911,410
Ensembl chr 1:183,201,297...183,205,404 		JBrowse link
G C8H10orf90 chromosome 8 C10orf90 homolog involved_in ISO (PMID:20154723) UniProt PMID:20154723 NCBI chr10:122,987,122...123,243,653
Ensembl chr10:127,259,451...127,357,119 		JBrowse link
G C9H11orf54 chromosome 9 C11orf54 homolog involved_in IEA Ensembl GO_REF:0000107 NCBI chr11:88,763,232...88,785,075
Ensembl chr11:92,250,482...92,272,026 		JBrowse link
G CASP3 caspase 3 acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr 4:176,793,190...176,815,023
Ensembl chr 4:189,018,422...189,040,185 		JBrowse link
G CASP9 caspase 9 acts_upstream_of_or_within
involved_in		 IEA Ensembl GO_REF:0000107 NCBI chr 1:14,630,659...14,662,865
Ensembl chr 1:15,624,666...15,656,266 		JBrowse link
G CBL Cbl proto-oncogene ISO RGD PMID:19546888 RGD:11038823 NCBI chr11:114,044,996...114,149,204
Ensembl chr11:117,973,187...118,074,671 		JBrowse link
G CBX1 chromobox 1 involved_in ISO (PMID:27248496) UniProt PMID:27248496 NCBI chr17:9,434,141...9,467,865 JBrowse link
G CBX3 chromobox 3 involved_in ISO (PMID:27248496) UniProt PMID:27248496 NCBI chr 7:26,847,247...26,859,339
Ensembl chr 7:26,450,411...26,462,350 		JBrowse link
G CBX5 chromobox 5 involved_in IEA Ensembl GO_REF:0000107 NCBI chr12:34,463,826...34,521,656
Ensembl chr12:35,218,239...35,236,009 		JBrowse link
G CCDC13 coiled-coil domain containing 13 acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr 3:42,615,424...42,680,102
Ensembl chr 3:43,679,176...43,743,463 		JBrowse link
G CCND1 cyclin D1 involved_in ISO (PMID:19412162) UniProt PMID:19412162 NCBI chr11:64,737,006...64,750,353 JBrowse link
G CCNK cyclin K acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr14:80,105,372...80,136,511
Ensembl chr14:99,438,814...99,480,842 		JBrowse link
G CDK1 cyclin dependent kinase 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr10:57,314,692...57,331,261
Ensembl chr10:59,647,993...59,664,434 		JBrowse link
G CDK2 cyclin dependent kinase 2 involved_in ISO
IEA		 RGD
UniProt		 PMID:19151707 GO_REF:0000043 RGD:10053571 NCBI chr12:32,940,225...32,946,236
Ensembl chr12:33,189,934...33,195,945 		JBrowse link
G CDK3 cyclin dependent kinase 3 acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr17:69,947,125...69,952,567
Ensembl chr17:75,498,134...75,503,448 		JBrowse link
G CDK5 cyclin dependent kinase 5 ISO RGD PMID:19151707 RGD:10053571 NCBI chr 7:142,640,630...142,644,785
Ensembl chr 7:154,793,344...154,797,499 		JBrowse link
G CDK6 cyclin dependent kinase 6 ISO RGD PMID:19151707 RGD:10053571 NCBI chr 7:84,603,419...84,835,082 JBrowse link
G CDKN1A cyclin dependent kinase inhibitor 1A involved_in
acts_upstream_of_or_within		 IEA TreeGrafter
Ensembl		 GO_REF:0000107 GO_REF:0000118 NCBI chr 6:36,241,405...36,250,032
Ensembl chr 6:37,436,990...37,445,599 		JBrowse link
G CDKN2AIP CDKN2A interacting protein involved_in IEA Ensembl GO_REF:0000107 NCBI chr 4:175,621,561...175,626,138
Ensembl chr 4:187,848,215...187,852,673 		JBrowse link
G CENPS centromere protein S involved_in IEA UniProt GO_REF:0000043 NCBI chr 1:9,190,303...9,211,812 JBrowse link
G CENPX centromere protein X involved_in IEA UniProt GO_REF:0000043 NCBI chr17:76,423,317...76,427,577
Ensembl chr17:82,128,636...82,132,831 		JBrowse link
G CEP63 centrosomal protein 63 involved_in IEA UniProt GO_REF:0000043 NCBI chr 3:131,532,450...131,609,240
Ensembl chr 3:139,003,898...139,092,680 		JBrowse link
G CGAS cyclic GMP-AMP synthase involved_in IEA Ensembl
TreeGrafter		 GO_REF:0000107 GO_REF:0000118 NCBI chr 6:71,252,050...71,279,121
Ensembl chr 6:74,544,251...74,566,965 		JBrowse link
G CHAF1A chromatin assembly factor 1 subunit A involved_in IEA UniProt GO_REF:0000043 NCBI chr19:3,425,182...3,461,646
Ensembl chr19:4,375,379...4,409,339 		JBrowse link
G CHCHD6 coiled-coil-helix-coiled-coil-helix domain containing 6 involved_in ISO (PMID:22228767) UniProt PMID:22228767 NCBI chr 3:123,747,049...124,003,254 JBrowse link
G CHD1L chromodomain helicase DNA binding protein 1 like involved_in IEA Ensembl
TreeGrafter		 GO_REF:0000107 GO_REF:0000118 NCBI chr 1:122,595,246...122,720,788
Ensembl chr 1:112,809,274...112,862,219 		JBrowse link
G CHD2 chromodomain helicase DNA binding protein 2 acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr15:71,568,560...71,713,330
Ensembl chr15:90,781,169...90,903,569 		JBrowse link
G CHEK1 checkpoint kinase 1 involved_in
acts_upstream_of_or_within		 IEA UniProt
Ensembl		 GO_REF:0000043 GO_REF:0000107 NCBI chr11:120,446,352...120,478,207
Ensembl chr11:124,359,218...124,390,981 		JBrowse link
G CHEK2 checkpoint kinase 2 involved_in
acts_upstream_of_or_within		 ISO (PMID:16481012)
(PMID:24550317)		 UniProt
MGI		 PMID:16481012 PMID:24550317 NCBI chr22:9,757,038...9,811,171 JBrowse link
G CIB1 calcium and integrin binding 1 involved_in ISO (PMID:12011095) HGNC-UCL PMID:12011095 NCBI chr15:68,919,377...68,923,213 JBrowse link
G CIP2A cellular inhibitor of PP2A involved_in IEA Ensembl GO_REF:0000107 NCBI chr 3:105,668,385...105,714,487
Ensembl chr 3:112,606,933...112,646,345 		JBrowse link
G CLOCK clock circadian regulator involved_in IEA UniProt GO_REF:0000043 NCBI chr 4:68,391,310...68,509,813
Ensembl chr 4:75,018,898...75,066,726 		JBrowse link
G CSNK2A1 casein kinase 2 alpha 1 involved_in ISO (PMID:18411307), (PMID:18583988), (PMID:20545769), (PMID:30898438), (PMID:35597237) UniProt PMID:18411307 PMID:18583988 PMID:20545769 PMID:30898438 PMID:35597237 NCBI chr20:689,494...752,092
Ensembl chr20:456,629...521,126 		JBrowse link
G CTC1 CST telomere replication complex component 1 acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr17:43,410,385...43,433,784
Ensembl chr17:48,142,864...48,165,537 		JBrowse link
G CTLA4 cytotoxic T-lymphocyte associated protein 4 involved_in IEA Ensembl GO_REF:0000107 NCBI chr2B:91,054,917...91,106,234
Ensembl chr2B:209,239,417...209,244,498 		JBrowse link
G CUL4A cullin 4A involved_in ISO (PMID:22118460) ComplexPortal PMID:22118460 NCBI chr13:94,350,484...94,409,183
Ensembl chr13:113,428,271...113,472,701 		JBrowse link
G CYREN cell cycle regulator of NHEJ involved_in ISO (PMID:30017584) DisProt PMID:30017584 NCBI chr 7:127,130,587...127,148,824 JBrowse link
G DCLRE1A DNA cross-link repair 1A involved_in IEA UniProt GO_REF:0000043 NCBI chr10:110,433,735...110,453,565
Ensembl chr10:113,866,759...113,886,141 		JBrowse link
G DCLRE1B DNA cross-link repair 1B involved_in IEA UniProt GO_REF:0000043 NCBI chr 1:88,643,664...88,651,962
Ensembl chr 1:123,692,915...123,701,403 		JBrowse link
G DCLRE1C DNA cross-link repair 1C involved_in IEA UniProt GO_REF:0000043 NCBI chr10:14,901,335...14,956,947
Ensembl chr10:15,236,558...15,269,043 		JBrowse link
G DCUN1D5 defective in cullin neddylation 1 domain containing 5 involved_in IEA Ensembl GO_REF:0000107 NCBI chr11:97,996,643...98,038,108
Ensembl chr11:101,493,113...101,522,920 		JBrowse link
G DDB1 damage specific DNA binding protein 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr11:56,599,422...56,633,140
Ensembl chr11:59,964,235...59,997,805 		JBrowse link
G DDB2 damage specific DNA binding protein 2 involved_in IEA UniProt GO_REF:0000043 NCBI chr11:47,161,345...47,185,526
Ensembl chr11:47,714,723...47,738,761 		JBrowse link
G DDIAS DNA damage induced apoptosis suppressor acts_upstream_of_or_within ISO (PMID:17515607) MGI PMID:17515607 NCBI chr11:77,967,057...77,999,829
Ensembl chr11:81,579,505...81,635,075 		JBrowse link
G DDX11 DEAD/H-box helicase 11 involved_in ISO (PMID:23797032) UniProt PMID:23797032 NCBI chr12:55,176,165...55,207,123 JBrowse link
G DELE1 DAP3 binding cell death enhancer 1 involved_in ISO (PMID:37832546) UniProt PMID:37832546 NCBI chr 5:137,283,938...137,302,203
Ensembl chr 5:143,394,554...143,412,532 		JBrowse link
G DGCR8 DGCR8 microprocessor complex subunit involved_in IEA Ensembl GO_REF:0000107 NCBI chr22:2,841,041...2,872,325
Ensembl chr22:18,518,783...18,544,740 		JBrowse link
G DTL denticleless E3 ubiquitin protein ligase homolog involved_in IEA Ensembl GO_REF:0000107 NCBI chr 1:187,603,600...187,672,006
Ensembl chr 1:192,466,408...192,535,071 		JBrowse link
G DYNLL1 dynein light chain LC8-type 1 involved_in IEA UniProt GO_REF:0000043 NCBI chr12:118,078,401...118,080,822
Ensembl chr12:121,452,118...121,454,550 		JBrowse link
G DYRK2 dual specificity tyrosine phosphorylation regulated kinase 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chr12:21,241,325...21,260,321
Ensembl chr12:21,757,436...21,767,505 		JBrowse link
G EME1 essential meiotic structure-specific endonuclease 1 involved_in IEA UniProt GO_REF:0000043 NCBI chr17:44,467,537...44,475,883
Ensembl chr17:49,341,791...49,349,959 		JBrowse link
G EME2 essential meiotic structure-specific endonuclease subunit 2 involved_in IEA UniProt GO_REF:0000043 NCBI chr16:395,571...403,233
Ensembl chr16:1,825,622...1,829,557 		JBrowse link
G ENDOG endonuclease G involved_in ISO (PMID:33473107) UniProt PMID:33473107 NCBI chr 9:99,941,856...99,945,957 JBrowse link
G ERCC1 ERCC excision repair 1, endonuclease non-catalytic subunit acts_upstream_of_or_within
involved_in		 IEA Ensembl
UniProt		 GO_REF:0000043 GO_REF:0000107 NCBI chr19:42,356,039...42,427,754
Ensembl chr19:50,951,674...50,968,430 		JBrowse link
G ERCC2 ERCC excision repair 2, TFIIH core complex helicase subunit involved_in IEA UniProt GO_REF:0000043 GO_REF:0000117 NCBI chr19:42,298,927...42,319,816
Ensembl chr19:50,897,004...50,915,819 		JBrowse link
G ERCC3 ERCC excision repair 3, TFIIH core complex helicase subunit involved_in IEA UniProt GO_REF:0000043 NCBI chr2B:32,983,492...33,020,492
Ensembl chr2B:127,922,483...127,959,372 		JBrowse link
G ERCC4 ERCC excision repair 4, endonuclease catalytic subunit involved_in IEA UniProt GO_REF:0000043 NCBI chr16:12,848,334...12,880,480
Ensembl chr16:14,272,417...14,304,496 		JBrowse link
G ERCC5 ERCC excision repair 5, endonuclease involved_in IEA UniProt GO_REF:0000043 NCBI chr13:84,005,950...84,036,710
Ensembl chr13:103,096,344...103,174,182 		JBrowse link
G ERCC6 ERCC excision repair 6, chromatin remodeling factor acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr10:44,703,720...44,784,948 JBrowse link
G ERCC6L2 ERCC excision repair 6 like 2 involved_in ISO (PMID:37014751) UniProt PMID:37014751 NCBI chr 9:66,967,399...67,153,934
Ensembl chr 9:95,092,512...95,183,122 		JBrowse link
G ERCC8 ERCC excision repair 8, CSA ubiquitin ligase complex subunit involved_in IEA Ensembl
UniProt		 GO_REF:0000043 GO_REF:0000107 NCBI chr 5:53,053,712...53,131,563
Ensembl chr 5:54,693,987...54,765,496 		JBrowse link
G ETAA1 ETAA1 activator of ATR kinase involved_in IEA Ensembl
TreeGrafter		 GO_REF:0000107 GO_REF:0000118 NCBI chr2A:67,455,668...67,470,509
Ensembl chr2A:68,578,554...68,591,534 		JBrowse link
G EXO1 exonuclease 1 involved_in IEA UniProt GO_REF:0000043 NCBI chr 1:217,410,175...217,451,982
Ensembl chr 1:222,389,684...222,431,556 		JBrowse link
G EYA1 EYA transcriptional coactivator and phosphatase 1 involved_in IEA UniProt GO_REF:0000043 NCBI chr 8:67,728,057...68,060,069
Ensembl chr 8:69,387,769...69,551,829 		JBrowse link
G EYA2 EYA transcriptional coactivator and phosphatase 2 involved_in IEA UniProt GO_REF:0000043 NCBI chr20:43,226,621...43,520,301
Ensembl chr20:44,310,451...44,607,468 		JBrowse link
G EYA3 EYA transcriptional coactivator and phosphatase 3 involved_in IEA UniProt GO_REF:0000043 NCBI chr 1:27,230,623...27,349,355
Ensembl chr 1:28,270,116...28,386,878 		JBrowse link
G EYA4 EYA transcriptional coactivator and phosphatase 4 involved_in IEA UniProt GO_REF:0000043 NCBI chr 6:131,016,143...131,306,251
Ensembl chr 6:135,116,978...135,404,403 		JBrowse link
G FAAP20 FA core complex associated protein 20 involved_in IEA TreeGrafter GO_REF:0000118 NCBI chr 1:900,616...922,845 JBrowse link
G FAAP24 FA core complex associated protein 24 involved_in IEA UniProt GO_REF:0000043 NCBI chr19:29,895,258...29,900,531
Ensembl chr19:38,639,167...38,644,143 		JBrowse link
G FAM111A FAM111 trypsin like peptidase A involved_in IEA Ensembl GO_REF:0000107 NCBI chr11:54,359,711...54,372,132
Ensembl chr11:57,818,413...57,823,046 		JBrowse link
G FAN1 FANCD2 and FANCI associated nuclease 1 involved_in IEA UniProt GO_REF:0000043 NCBI chr15:9,395,348...9,435,434
Ensembl chr15:28,433,749...28,473,211 		JBrowse link
G FANCC FA complementation group C involved_in IEA UniProt GO_REF:0000043 NCBI chr 9:66,201,581...66,418,229
Ensembl chr 9:94,329,971...94,477,198 		JBrowse link
G FANCD2 FA complementation group D2 acts_upstream_of_or_within ISO (PMID:12893777) MGI PMID:12893777 NCBI chr 3:9,932,292...10,037,332
Ensembl chr 3:10,312,476...10,389,190 		JBrowse link
G FANCF FA complementation group F acts_upstream_of_or_within
involved_in		 ISO
IEA		 (PMID:21915857) MGI
TreeGrafter		 PMID:21915857 GO_REF:0000118 NCBI chr11:22,634,301...22,637,885
Ensembl chr11:22,544,052...22,545,176 		JBrowse link
G FANCG FA complementation group G involved_in
acts_upstream_of_or_within		 IEA TreeGrafter
Ensembl		 GO_REF:0000107 GO_REF:0000118 NCBI chr 9:34,924,399...34,931,077
Ensembl chr 9:35,730,176...35,736,648 		JBrowse link
G FANCL FA complementation group L involved_in IEA Ensembl GO_REF:0000107 NCBI chr2A:58,270,620...58,353,001
Ensembl chr2A:59,418,265...59,499,496 		JBrowse link
G FBH1 F-box DNA helicase 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr10:5,931,389...5,978,844
Ensembl chr10:5,915,713...5,962,778 		JBrowse link
G FBXO31 F-box protein 31 involved_in IEA Ensembl GO_REF:0000107 NCBI chr16:67,997,481...68,053,081
Ensembl chr16:87,322,364...87,377,104 		JBrowse link
G FBXO45 F-box protein 45 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 3:193,913,712...193,934,123
Ensembl chr 3:203,856,374...203,876,537 		JBrowse link
G FBXO5 F-box protein 5 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 6:150,793,020...150,806,008
Ensembl chr 6:155,481,753...155,494,231 		JBrowse link
G FBXW7 F-box and WD repeat domain containing 7 involved_in ISO (PMID:17873522) UniProt PMID:17873522 NCBI chr 4:144,660,676...144,874,404
Ensembl chr 4:156,312,274...156,402,351 		JBrowse link
G FEN1 flap structure-specific endonuclease 1 involved_in IEA UniProt GO_REF:0000043 NCBI chr11:57,092,270...57,096,828
Ensembl chr11:60,455,474...60,456,616 		JBrowse link
G FH fumarate hydratase involved_in ISO (PMID:20231875), (PMID:26237645) UniProt PMID:20231875 PMID:26237645 NCBI chr 1:217,059,847...217,081,795
Ensembl chr 1:222,041,142...222,064,212 		JBrowse link
G FLYWCH1 FLYWCH-type zinc finger 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr16:1,827,105...1,892,885
Ensembl chr16:3,027,656...3,064,557 		JBrowse link
G FMN2 formin 2 involved_in ISO (PMID:26287480)
(PMID:23375502)		 UniProt PMID:23375502 PMID:26287480 NCBI chr 1:215,626,889...216,023,590 JBrowse link
G FOXO1 forkhead box O1 involved_in ISO (PMID:21196578) UniProt PMID:21196578 NCBI chr13:21,763,729...21,874,279 JBrowse link
G FOXP1 forkhead box P1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 3:70,893,933...71,523,892
Ensembl chr 3:72,258,456...72,498,173 		JBrowse link
G GADD45A growth arrest and DNA damage inducible alpha involved_in IEA UniProt GO_REF:0000043 NCBI chr 1:66,925,063...66,928,222
Ensembl chr 1:68,880,912...68,884,188 		JBrowse link
G GCNA germ cell nuclear acidic peptidase involved_in IEA UniProt GO_REF:0000117 NCBI chr  X:60,843,078...60,878,840
Ensembl chr  X:70,911,941...70,930,638 		JBrowse link
G GFI1 growth factor independent 1 transcriptional repressor involved_in IEA Ensembl GO_REF:0000107 NCBI chr 1:95,139,171...95,151,054
Ensembl chr 1:93,876,245...93,883,528 		JBrowse link
G GNB1L G protein subunit beta 1 like involved_in IEA Ensembl GO_REF:0000107 NCBI chr22:2,542,925...2,616,201
Ensembl chr22:18,222,195...18,289,580 		JBrowse link
G GNL1 G protein nucleolar 1 (putative) involved_in IEA Ensembl GO_REF:0000107 NCBI chr 6:30,284,204...30,300,493
Ensembl chr 6:31,154,749...31,171,449 		JBrowse link
G GTF2H3 general transcription factor IIH subunit 3 involved_in IEA UniProt GO_REF:0000043 NCBI chr12:121,218,813...121,246,807
Ensembl chr12:125,445,381...125,473,763 		JBrowse link
G GTF2H4 general transcription factor IIH subunit 4 involved_in IEA UniProt GO_REF:0000043 NCBI chr 6:30,653,398...30,659,316
Ensembl chr 6:31,521,501...31,527,456 		JBrowse link
G GTF2H5 general transcription factor IIH subunit 5 involved_in IEA UniProt GO_REF:0000043 Ensembl chr 6:158,126,665...158,153,663 JBrowse link
G HDGFL2 HDGF like 2 involved_in IEA UniProt GO_REF:0000043 NCBI chr19:3,489,986...3,521,935
Ensembl chr19:4,440,491...4,471,212 		JBrowse link
G HELB DNA helicase B involved_in IEA Ensembl GO_REF:0000107 NCBI chr12:22,571,448...22,607,417
Ensembl chr12:23,078,732...23,114,134 		JBrowse link
G HMCES 5-hydroxymethylcytosine binding, ES cell specific involved_in IEA UniProt
InterPro
Ensembl		 GO_REF:0000002 GO_REF:0000043 GO_REF:0000107 NCBI chr 3:126,339,758...126,367,166
Ensembl chr 3:133,694,676...133,721,519 		JBrowse link
G HMGB1 high mobility group box 1 involved_in IEA UniProt GO_REF:0000043 NCBI chr13:11,737,942...11,894,923
Ensembl chr13:30,174,899...30,179,527 		JBrowse link
G HROB homologous recombination factor with OB-fold involved_in IEA Ensembl GO_REF:0000107 NCBI chr17:13,233,464...13,254,726
Ensembl chr17:13,395,473...13,409,505 		JBrowse link
G HUS1 HUS1 checkpoint clamp component acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr 7:48,606,848...48,622,194
Ensembl chr 7:48,714,668...48,731,005 		JBrowse link
G HUWE1 HECT, UBA and WWE domain containing E3 ubiquitin protein ligase 1 involved_in IEA UniProt GO_REF:0000043 NCBI chr  X:45,746,228...45,897,250
Ensembl chr  X:53,855,404...54,005,366 		JBrowse link
G IER3 immediate early response 3 acts_upstream_of_or_within ISO (PMID:20467439) MGI PMID:20467439 NCBI chr 6:30,488,162...30,489,784 JBrowse link
G IKBKG inhibitor of nuclear factor kappa B kinase regulatory subunit gamma involved_in IEA Ensembl GO_REF:0000107 NCBI chr  X:143,988,720...144,010,078
Ensembl chr  X:153,854,493...153,876,092 		JBrowse link
G IMMP2L inner mitochondrial membrane peptidase subunit 2 acts_upstream_of_or_within ISO (PMID:21824519) MGI PMID:21824519 NCBI chr 7:102,647,212...103,536,293 JBrowse link
G INIP INTS3 and NABP interacting protein involved_in IEA Ensembl
UniProt
InterPro		 GO_REF:0000002 GO_REF:0000043 GO_REF:0000104 GO_REF:0000107 NCBI chr 9:83,811,378...83,845,638
Ensembl chr 9:111,965,947...111,999,561 		JBrowse link
G INO80 INO80 complex ATPase subunit involved_in IEA UniProt GO_REF:0000043 NCBI chr15:19,920,980...20,058,117
Ensembl chr15:38,170,982...38,307,311 		JBrowse link
G INTS3 integrator complex subunit 3 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 1:129,084,681...129,130,669
Ensembl chr 1:132,714,200...132,759,842 		JBrowse link
G KAT5 lysine acetyltransferase 5 involved_in IEA Ensembl
UniProt		 GO_REF:0000043 GO_REF:0000107 NCBI chr11:61,071,118...61,078,667
Ensembl chr11:64,404,572...64,412,667 		JBrowse link
G KDM4D lysine demethylase 4D acts_upstream_of_or_within ISO (PMID:24550317) MGI PMID:24550317 NCBI chr11:89,987,537...90,013,421 JBrowse link
G KIN Kin17 DNA and RNA binding protein involved_in IEA Ensembl
TreeGrafter		 GO_REF:0000107 GO_REF:0000118 NCBI chr10:7,783,842...7,820,778
Ensembl chr10:7,768,263...7,801,350 		JBrowse link
G KNL1 kinetochore scaffold 1 acts_upstream_of_or_within ISO (PMID:31197172) MGI PMID:31197172 NCBI chr15:19,539,264...19,609,593
Ensembl chr15:37,801,705...37,860,858 		JBrowse link
G LIG1 DNA ligase 1 involved_in IEA UniProt GO_REF:0000043 NCBI chr19:45,056,737...45,110,867
Ensembl chr19:53,706,778...53,761,088 		JBrowse link
G LIG3 DNA ligase 3 involved_in IEA UniProt GO_REF:0000043 NCBI chr17:21,776,483...21,805,706
Ensembl chr17:22,074,046...22,095,220 		JBrowse link
G LIG4 DNA ligase 4 involved_in IEA UniProt GO_REF:0000043 NCBI chr13:89,336,434...89,347,418
Ensembl chr13:108,475,820...108,478,555 		JBrowse link
G LOC100970335 X-ray repair cross-complementing protein 6-like involved_in IEA UniProt GO_REF:0000043 NCBI chr  X:139,876,341...139,878,314 JBrowse link
G LOC100976978 E3 ubiquitin-protein ligase HERC2 involved_in IEA Ensembl GO_REF:0000107 NCBI chr15:1,590,558...1,800,023
Ensembl chr15:25,536,483...25,746,074 		JBrowse link
G LOC100978613 dynein light chain 1, cytoplasmic-like involved_in IEA UniProt GO_REF:0000043 NCBI chr 1:5,080,882...5,081,301 JBrowse link
G LOC100979315 phorbol-12-myristate-13-acetate-induced protein 1 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:12952892) InterPro
MGI		 PMID:12952892 GO_REF:0000002 NCBI chr18:53,286,590...53,290,913
Ensembl chr18:56,611,098...56,615,449 		JBrowse link
G LOC100987487 general transcription factor IIH subunit 2 involved_in IEA UniProt GO_REF:0000043 NCBI chr 5:44,412,653...44,445,158 JBrowse link
G LOC100989432 G/T mismatch-specific thymine DNA glycosylase-like involved_in IEA UniProt GO_REF:0000043 NCBI chr12:60,514,718...60,516,287 JBrowse link
G LOC100991754 histone PARylation factor 1 involved_in IEA Ensembl
TreeGrafter
InterPro		 GO_REF:0000002 GO_REF:0000107 GO_REF:0000118 NCBI chr 4:161,949,343...161,977,887
Ensembl chr 4:174,021,060...174,049,213 		JBrowse link
G LOC100994157 histone H2AX involved_in ISO (PMID:15149599)
(PMID:27248496)		 BHF-UCL
UniProt		 PMID:15149599 PMID:27248496 NCBI chr11:113,932,078...113,933,679 JBrowse link
G LOC100994754 serine/threonine-protein phosphatase 4 regulatory subunit 3A-like involved_in IEA TreeGrafter GO_REF:0000118 NCBI chr 4:134,180,230...134,184,350 JBrowse link
G LYN LYN proto-oncogene, Src family tyrosine kinase involved_in IEA Ensembl GO_REF:0000107 NCBI chr 8:52,318,497...52,455,741
Ensembl chr 8:49,755,708...49,825,287 		JBrowse link
G MACROD1 mono-ADP ribosylhydrolase 1 involved_in ISO (PMID:23474712) UniProt PMID:23474712 NCBI chr11:59,355,525...59,525,620 JBrowse link
G MACROD2 mono-ADP ribosylhydrolase 2 involved_in IEA Ensembl
TreeGrafter		 GO_REF:0000107 GO_REF:0000118 NCBI chr20:13,966,338...16,020,506
Ensembl chr20:13,950,260...15,997,806 		JBrowse link
G MAEL maelstrom spermatogenic transposon silencer acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr 1:142,341,646...142,442,521
Ensembl chr 1:146,195,482...146,228,669 		JBrowse link
G MAPK1 mitogen-activated protein kinase 1 acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr22:3,883,119...3,990,368
Ensembl chr22:20,365,487...20,450,335 		JBrowse link
G MAPK14 mitogen-activated protein kinase 14 acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr 6:35,586,847...35,683,041
Ensembl chr 6:36,788,233...36,871,114 		JBrowse link
G MAPK15 mitogen-activated protein kinase 15 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 8:140,468,365...140,474,604
Ensembl chr 8:143,481,567...143,492,859 		JBrowse link
G MAPK3 mitogen-activated protein kinase 3 acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 Ensembl chr16:30,489,362...30,498,017 JBrowse link
G MAPKAPK2 MAPK activated protein kinase 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 1:182,286,854...182,336,306
Ensembl chr 1:186,608,158...186,613,911 		JBrowse link
G MAPT microtubule associated protein tau involved_in ISO (PMID:21131359) ParkinsonsUK-UCL PMID:21131359 NCBI chr17:11,373,220...11,506,669
Ensembl chr17:11,458,159...11,523,129 		JBrowse link
G MBD4 methyl-CpG binding domain 4, DNA glycosylase acts_upstream_of_or_within
involved_in		 ISO
IEA		 (PMID:14562041) MGI
UniProt		 PMID:14562041 GO_REF:0000043 NCBI chr 3:126,489,125...126,498,034
Ensembl chr 3:133,839,643...133,851,450 		JBrowse link
G MCL1 MCL1 apoptosis regulator, BCL2 family member acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr 1:125,918,760...125,923,952
Ensembl chr 1:129,566,827...129,572,086 		JBrowse link
G MCM10 minichromosome maintenance 10 replication initiation factor involved_in IEA Ensembl GO_REF:0000107 NCBI chr10:13,165,811...13,215,024
Ensembl chr10:13,138,824...13,187,991 		JBrowse link
G MCM7 minichromosome maintenance complex component 7 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 7:92,128,037...92,136,976
Ensembl chr 7:105,561,591...105,570,720 		JBrowse link
G MCM8 minichromosome maintenance 8 homologous recombination repair factor involved_in IEA Ensembl GO_REF:0000107 NCBI chr20:5,945,034...5,993,725
Ensembl chr20:5,729,174...5,775,133 		JBrowse link
G MCM9 minichromosome maintenance 9 homologous recombination repair factor involved_in IEA Ensembl
UniProt		 GO_REF:0000043 GO_REF:0000107 NCBI chr 6:116,620,188...116,743,435
Ensembl chr 6:120,763,329...120,881,865 		JBrowse link
G MDC1 mediator of DNA damage checkpoint 1 involved_in IEA Ensembl
UniProt		 GO_REF:0000043 GO_REF:0000107 NCBI chr 6:30,444,570...30,462,432
Ensembl chr 6:31,314,560...31,329,243 		JBrowse link
G MEN1 menin 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr11:60,159,009...60,166,222
Ensembl chr11:63,499,962...63,507,164 		JBrowse link
G METTL3 methyltransferase 3, N6-adenosine-methyltransferase complex catalytic subunit involved_in IEA Ensembl GO_REF:0000107 NCBI chr14:2,315,868...2,329,460
Ensembl chr14:20,392,665...20,405,906 		JBrowse link
G MGMT O-6-methylguanine-DNA methyltransferase acts_upstream_of_or_within
involved_in		 ISO
IEA		 RGD
Ensembl
UniProt		 PMID:12815001 GO_REF:0000043 GO_REF:0000107 RGD:2316926 NCBI chr10:126,059,701...126,365,850
Ensembl chr10:130,305,485...130,609,422 		JBrowse link
G MLH1 mutL homolog 1 acts_upstream_of_or_within
involved_in		 ISO
IEA		 (PMID:10657972), (PMID:9560238)
(PMID:14562041), (PMID:16204034)		 MGI
UniProt		 PMID:9560238 PMID:10657972 PMID:14562041 PMID:16204034 GO_REF:0000043 NCBI chr 3:36,899,828...36,957,076
Ensembl chr 3:37,189,439...37,245,801 		JBrowse link
G MLH3 mutL homolog 3 involved_in
acts_upstream_of_or_within		 IEA UniProt
Ensembl		 GO_REF:0000043 GO_REF:0000107 NCBI chr14:55,568,033...55,603,672
Ensembl chr14:74,413,319...74,445,749 		JBrowse link
G MMS19 MMS19 homolog, cytosolic iron-sulfur assembly component involved_in IEA UniProt GO_REF:0000043 NCBI chr10:94,080,690...94,120,811
Ensembl chr10:97,574,257...97,614,146 		JBrowse link
G MMS22L MMS22 like, DNA repair protein involved_in IEA UniProt GO_REF:0000043 NCBI chr 6:94,989,906...95,127,260
Ensembl chr 6:98,861,299...99,011,773 		JBrowse link
G MNDA myeloid cell nuclear differentiation antigen involved_in IEA Ensembl GO_REF:0000107 NCBI chr 1:134,190,768...134,208,723
Ensembl chr 1:137,992,523...137,999,587 		JBrowse link
G MORC2 MORC family CW-type zinc finger 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chr22:11,912,043...11,995,497
Ensembl chr22:29,753,241...29,795,632 		JBrowse link
G MPG N-methylpurine DNA glycosylase involved_in IEA UniProt GO_REF:0000043 Ensembl chr16:70,655...76,763 JBrowse link
G MRE11 MRE11 homolog, double strand break repair nuclease involved_in
acts_upstream_of_or_within		 IEA UniProt
Ensembl		 GO_REF:0000043 GO_REF:0000107 NCBI chr11:89,418,537...89,500,705
Ensembl chr11:92,918,549...92,985,966 		JBrowse link
G MRNIP MRN complex interacting protein involved_in IEA Ensembl GO_REF:0000107 NCBI chr 5:174,989,967...175,020,550
Ensembl chr 5:182,299,016...182,340,632 		JBrowse link
G MSH2 mutS homolog 2 involved_in
acts_upstream_of_or_within		 IEA UniProt
Ensembl		 GO_REF:0000043 GO_REF:0000107 NCBI chr2A:47,524,468...47,602,376
Ensembl chr2A:48,447,207...48,554,461 		JBrowse link
G MSH3 mutS homolog 3 involved_in IEA UniProt GO_REF:0000043 NCBI chr 5:34,408,469...34,663,483
Ensembl chr 5:34,719,322...34,938,469 		JBrowse link
G MSH6 mutS homolog 6 involved_in IEA UniProt GO_REF:0000043 GO_REF:0000117 NCBI chr2A:47,901,591...47,926,662
Ensembl chr2A:48,824,350...48,849,779 		JBrowse link
G MSL2 MSL complex subunit 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 3:133,203,579...133,252,294
Ensembl chr 3:140,667,652...140,714,294 		JBrowse link
G MTREX Mtr4 exosome RNA helicase involved_in IEA Ensembl GO_REF:0000107 NCBI chr 5:58,604,582...58,722,532
Ensembl chr 5:60,227,431...60,345,303 		JBrowse link
G MUS81 MUS81 structure-specific endonuclease subunit involved_in IEA UniProt GO_REF:0000043 NCBI chr11:61,220,699...61,226,747
Ensembl chr11:64,549,840...64,555,875 		JBrowse link
G MUTYH mutY DNA glycosylase involved_in IEA UniProt GO_REF:0000043 NCBI chr 1:44,632,102...44,643,292
Ensembl chr 1:45,990,588...46,002,645 		JBrowse link
G MYC MYC proto-oncogene, bHLH transcription factor involved_in
acts_upstream_of_or_within		 ISS
IEA		 UniProt
Ensembl		 GO_REF:0000024 GO_REF:0000107 NCBI chr 8:124,387,561...124,393,551
Ensembl chr 8:127,131,512...127,136,863 		JBrowse link
G NABP1 nucleic acid binding protein 1 involved_in IEA Ensembl
UniProt		 GO_REF:0000043 GO_REF:0000107 NCBI chr2B:78,980,156...78,989,309
Ensembl chr2B:196,895,166...196,903,977 		JBrowse link
G NABP2 nucleic acid binding protein 2 involved_in IEA Ensembl
UniProt		 GO_REF:0000043 GO_REF:0000107 NCBI chr12:32,685,521...32,693,318
Ensembl chr12:32,937,017...32,944,754 		JBrowse link
G NBN nibrin involved_in IEA UniProt
InterPro		 GO_REF:0000002 GO_REF:0000043 NCBI chr 8:86,622,797...86,674,202
Ensembl chr 8:88,575,198...88,626,307 		JBrowse link
G NCOA6 nuclear receptor coactivator 6 acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr20:31,044,339...31,154,798
Ensembl chr20:32,170,583...32,247,167 		JBrowse link
G NEDD4 NEDD4 E3 ubiquitin protein ligase involved_in ISO (PMID:17996703) BHF-UCL PMID:17996703 NCBI chr15:34,798,880...34,963,823
Ensembl chr15:53,118,411...53,283,076 		JBrowse link
G NEIL1 nei like DNA glycosylase 1 involved_in IEA UniProt GO_REF:0000043 NCBI chr15:54,263,424...54,271,601
Ensembl chr15:73,858,910...73,867,474 		JBrowse link
G NEIL2 nei like DNA glycosylase 2 involved_in IEA UniProt GO_REF:0000043 NCBI chr 8:7,415,540...7,433,270 JBrowse link
G NEIL3 nei like DNA glycosylase 3 involved_in IEA UniProt GO_REF:0000043 NCBI chr 4:169,503,942...169,556,654
Ensembl chr 4:181,738,803...181,795,082 		JBrowse link
G NEK1 NIMA related kinase 1 acts_upstream_of_or_within ISO (PMID:15604234) MGI PMID:15604234 NCBI chr 4:161,618,181...161,830,332
Ensembl chr 4:173,690,074...173,902,100 		JBrowse link
G NEK4 NIMA related kinase 4 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 3:52,649,280...52,712,645
Ensembl chr 3:53,878,760...53,938,520 		JBrowse link
G NFAT5 nuclear factor of activated T cells 5 involved_in IEA Ensembl GO_REF:0000107 NCBI chr16:49,942,461...50,080,519
Ensembl chr16:69,327,470...69,462,251 		JBrowse link
G NFATC2 nuclear factor of activated T cells 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chr20:47,734,054...47,910,435
Ensembl chr20:48,858,238...49,034,007 		JBrowse link
G NHEJ1 non-homologous end joining factor 1 involved_in IEA UniProt GO_REF:0000043 NCBI chr2B:106,326,596...106,419,928
Ensembl chr2B:224,926,183...225,008,788 		JBrowse link
G NIPBL NIPBL cohesin loading factor involved_in IEA Ensembl GO_REF:0000107 NCBI chr 5:73,306,527...73,491,367
Ensembl chr 5:78,585,649...78,698,184 		JBrowse link
G NKX3-1 NK3 homeobox 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 8:22,926,145...22,930,396
Ensembl chr 8:19,863,275...19,864,942 		JBrowse link
G NOP53 NOP53 ribosome biogenesis factor involved_in ISO (PMID:27829214) UniProt PMID:27829214 NCBI chr19:44,739,739...44,751,303 JBrowse link
G NPAS2 neuronal PAS domain protein 2 involved_in IEA Ensembl
UniProt		 GO_REF:0000043 GO_REF:0000107 Ensembl chr2A:101,868,933...101,972,866 JBrowse link
G NRDE2 NRDE-2, necessary for RNA interference, domain containing involved_in IEA Ensembl GO_REF:0000107 NCBI chr14:70,895,376...70,949,969
Ensembl chr14:90,247,035...90,300,705 		JBrowse link
G NSMCE1 NSE1 homolog, SMC5-SMC6 complex component involved_in IEA Ensembl
UniProt		 GO_REF:0000043 GO_REF:0000107 Ensembl chr16:27,598,382...27,642,488 JBrowse link
G NSMCE4A NSE4 homolog A, SMC5-SMC6 complex component involved_in ISO (PMID:18086888) UniProt PMID:18086888 NCBI chr10:118,532,358...118,550,097 JBrowse link
G NTHL1 nth like DNA glycosylase 1 involved_in IEA UniProt GO_REF:0000043 NCBI chr16:655,433...663,521
Ensembl chr16:2,127,858...2,135,656 		JBrowse link
G NUGGC nuclear GTPase, germinal center associated acts_upstream_of_or_within ISO (PMID:22833677) MGI PMID:22833677 NCBI chr 8:27,299,051...27,351,350
Ensembl chr 8:24,500,131...24,551,201 		JBrowse link
G NUPR2 nuclear protein 2, transcriptional regulator involved_in ISO (PMID:25899918) UniProt PMID:25899918 NCBI chr 7:56,727,702...56,729,433 JBrowse link
G OARD1 O-acyl-ADP-ribose deacylase 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 6:40,655,255...40,662,476
Ensembl chr 6:41,963,670...41,969,451 		JBrowse link
G OGG1 8-oxoguanine DNA glycosylase acts_upstream_of_or_within
involved_in		 IEA Ensembl
UniProt		 GO_REF:0000043 GO_REF:0000107 NCBI chr 3:9,702,311...9,742,283
Ensembl chr 3:9,940,955...9,947,335 		JBrowse link
G OTUB1 OTU deubiquitinase, ubiquitin aldehyde binding 1 involved_in ISO (PMID:20725033) UniProt PMID:20725033 NCBI chr11:59,342,820...59,355,386
Ensembl chr11:62,690,542...62,706,542 		JBrowse link
G PAGR1 PAXIP1 associated glutamate rich protein 1 involved_in ISO (PMID:19124460) UniProt PMID:19124460 Ensembl chr16:30,186,326...30,190,654 JBrowse link
G PAK1 p21 (RAC1) activated kinase 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr11:72,372,577...72,524,817
Ensembl chr11:76,015,998...76,104,197 		JBrowse link
G PARG poly(ADP-ribose) glycohydrolase acts_upstream_of_or_within ISO (PMID:15282315) MGI PMID:15282315 NCBI chr10:44,290,391...44,420,184 JBrowse link
G PARP1 poly(ADP-ribose) polymerase 1 acts_upstream_of_or_within
involved_in		 ISO
IEA		 (PMID:24550317) MGI
UniProt
Ensembl
RGD		 PMID:15857403 PMID:24550317 GO_REF:0000043 GO_REF:0000107 GO_REF:0000117 RGD:1601082 NCBI chr 1:201,820,355...201,867,673
Ensembl chr 1:206,812,981...206,860,356 		JBrowse link
G PARP2 poly(ADP-ribose) polymerase 2 involved_in IEA UniProt
Ensembl		 GO_REF:0000043 GO_REF:0000107 GO_REF:0000117 NCBI chr14:1,215,727...1,230,006
Ensembl chr14:19,269,046...19,282,853 		JBrowse link
G PARP3 poly(ADP-ribose) polymerase family member 3 involved_in IEA UniProt GO_REF:0000043 GO_REF:0000117 NCBI chr 3:51,883,695...51,890,266
Ensembl chr 3:53,112,494...53,119,053 		JBrowse link
G PARPBP PARP1 binding protein involved_in IEA UniProt GO_REF:0000043 NCBI chr12:99,707,641...99,784,993
Ensembl chr12:103,105,117...103,182,366 		JBrowse link
G PAXIP1 PAX interacting protein 1 involved_in
acts_upstream_of_or_within		 IEA UniProt
Ensembl		 GO_REF:0000043 GO_REF:0000107 NCBI chr 7:146,546,658...146,605,912
Ensembl chr 7:158,276,798...158,330,911 		JBrowse link
G PAXX PAXX non-homologous end joining factor involved_in IEA Ensembl GO_REF:0000107 NCBI chr 9:108,052,793...108,055,298
Ensembl chr 9:137,021,230...137,022,805 		JBrowse link
G PCLAF PCNA clamp associated factor involved_in IEA InterPro
UniProt
Ensembl		 GO_REF:0000002 GO_REF:0000043 GO_REF:0000107 NCBI chr15:43,311,115...43,331,979
Ensembl chr15:61,602,830...61,617,303 		JBrowse link
G PHF13 PHD finger protein 13 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 1:5,377,740...5,388,024
Ensembl chr 1:6,631,621...6,639,972 		JBrowse link
G PIAS1 protein inhibitor of activated STAT 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr15:47,006,718...47,141,035
Ensembl chr15:65,276,530...65,410,105 		JBrowse link
G PIDD1 p53-induced death domain protein 1 involved_in IEA InterPro
Ensembl		 GO_REF:0000002 GO_REF:0000107 NCBI chr11:816,629...827,295
Ensembl chr11:860,899...867,436 		JBrowse link
G PIERCE1 piercer of microtubule wall 1 acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr 9:106,635,911...106,641,274
Ensembl chr 9:135,628,471...135,633,837 		JBrowse link
G PIF1 PIF1 5'-to-3' DNA helicase involved_in IEA UniProt GO_REF:0000043 NCBI chr15:43,756,605...43,766,631
Ensembl chr15:62,041,461...62,052,311 		JBrowse link
G PLK3 polo like kinase 3 involved_in IEA Ensembl
TreeGrafter		 GO_REF:0000107 GO_REF:0000118 NCBI chr 1:44,104,564...44,110,162
Ensembl chr 1:45,470,016...45,476,021 		JBrowse link
G PLK5 polo like kinase 5 (inactive) involved_in IEA TreeGrafter GO_REF:0000118 Ensembl chr19:1,497,953...1,505,995 JBrowse link
G PMS1 PMS1 homolog 1, mismatch repair system component involved_in IEA UniProt GO_REF:0000043 NCBI chr2B:77,090,215...77,180,724
Ensembl chr2B:195,010,233...195,100,492 		JBrowse link
G PMS2 PMS1 homolog 2, mismatch repair system component involved_in
acts_upstream_of_or_within		 IEA UniProt
Ensembl		 GO_REF:0000043 GO_REF:0000107 GO_REF:0000117 NCBI chr 7:7,433,031...7,459,560
Ensembl chr 7:6,167,403...6,202,984 		JBrowse link
G PNKP polynucleotide kinase 3'-phosphatase involved_in IEA UniProt GO_REF:0000043 NCBI chr19:46,874,216...46,880,954
Ensembl chr19:55,790,048...55,796,762 		JBrowse link
G POLB DNA polymerase beta involved_in IEA Ensembl
UniProt		 GO_REF:0000043 GO_REF:0000107 NCBI chr 8:41,582,370...41,615,950
Ensembl chr 8:39,026,991...39,060,464 		JBrowse link
G POLE3 DNA polymerase epsilon 3, accessory subunit involved_in IEA TreeGrafter GO_REF:0000118 NCBI chr 9:84,509,237...84,512,651
Ensembl chr 9:112,879,047...112,882,951 		JBrowse link
G POLH DNA polymerase eta involved_in IEA UniProt GO_REF:0000043 NCBI chr 6:43,168,195...43,205,811
Ensembl chr 6:44,462,225...44,495,704 		JBrowse link
G POLK DNA polymerase kappa involved_in IEA Ensembl
UniProt		 GO_REF:0000043 GO_REF:0000107 GO_REF:0000117 NCBI chr 5:39,700,659...39,788,727
Ensembl chr 5:40,311,526...40,401,003 		JBrowse link
G POLL DNA polymerase lambda involved_in IEA UniProt GO_REF:0000043 NCBI chr10:98,181,049...98,190,463
Ensembl chr10:101,653,978...101,663,360 		JBrowse link
G POLM DNA polymerase mu involved_in IEA UniProt GO_REF:0000043 NCBI chr 7:44,785,797...44,796,624
Ensembl chr 7:44,852,594...44,862,816 		JBrowse link
G POLQ DNA polymerase theta involved_in IEA Ensembl GO_REF:0000107 NCBI chr 3:118,535,968...118,648,275
Ensembl chr 3:125,446,829...125,559,283 		JBrowse link
G PPP4R3A protein phosphatase 4 regulatory subunit 3A involved_in IEA TreeGrafter GO_REF:0000118 NCBI chr14:72,083,948...72,137,158 JBrowse link
G PPP4R3B protein phosphatase 4 regulatory subunit 3B involved_in IEA TreeGrafter GO_REF:0000118 NCBI chr2A:55,699,379...55,775,193
Ensembl chr2A:56,842,926...56,914,393 		JBrowse link
G PPP4R3C protein phosphatase 4 regulatory subunit 3C involved_in IEA TreeGrafter GO_REF:0000118 NCBI chr  X:20,054,934...20,058,418
Ensembl chr  X:27,411,142...27,414,318 		JBrowse link
G PRAP1 proline rich acidic protein 1 involved_in IEA Ensembl GO_REF:0000107 Ensembl chr10:134,248,728...134,268,442 JBrowse link
G PRKCD protein kinase C delta involved_in IEA Ensembl GO_REF:0000107 NCBI chr 3:53,104,137...53,135,588
Ensembl chr 3:54,330,328...54,357,910 		JBrowse link
G PRKDC protein kinase, DNA-activated, catalytic subunit involved_in IEA Ensembl
UniProt		 GO_REF:0000043 GO_REF:0000107 NCBI chr 8:44,201,391...44,386,803
Ensembl chr 8:41,593,029...41,778,299 		JBrowse link
G PRMT1 protein arginine methyltransferase 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr19:46,691,795...46,705,179
Ensembl chr19:55,610,938...55,623,135 		JBrowse link
G PRPF19 pre-mRNA processing factor 19 involved_in IEA UniProt GO_REF:0000043 NCBI chr11:56,153,965...56,169,821
Ensembl chr11:59,595,120...59,607,828 		JBrowse link
G PSEN1 presenilin 1 involved_in
acts_upstream_of_or_within		 IEA Ensembl GO_REF:0000107 NCBI chr14:53,718,299...53,802,684
Ensembl chr14:72,579,024...72,663,876 		JBrowse link
G PSME4 proteasome activator subunit 4 involved_in IEA Ensembl
UniProt		 GO_REF:0000043 GO_REF:0000107 NCBI chr2A:54,007,224...54,113,557
Ensembl chr2A:54,919,094...55,024,551 		JBrowse link
G RAD1 RAD1 checkpoint DNA exonuclease involved_in IEA UniProt GO_REF:0000043 NCBI chr 5:75,452,153...75,465,022
Ensembl chr 5:80,732,954...80,744,448 		JBrowse link
G RAD17 RAD17 checkpoint clamp loader component involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:15297881) Ensembl
UniProt
MGI		 PMID:15297881 GO_REF:0000043 GO_REF:0000107 NCBI chr 5:44,586,083...44,630,719
Ensembl chr 5:46,156,294...46,202,197 		JBrowse link
G RAD18 RAD18 E3 ubiquitin protein ligase acts_upstream_of_or_within
involved_in		 ISO
IEA		 (PMID:25023518)
(PMID:12509447)		 MGI
UniProt
Ensembl		 PMID:12509447 PMID:25023518 GO_REF:0000043 GO_REF:0000107 GO_REF:0000117 NCBI chr 3:8,832,910...8,918,067
Ensembl chr 3:9,076,500...9,161,585 		JBrowse link
G RAD23A RAD23 homolog A, nucleotide excision repair protein involved_in
acts_upstream_of_or_within		 IEA UniProt
Ensembl		 GO_REF:0000043 GO_REF:0000107 NCBI chr19:12,508,232...12,516,068
Ensembl chr19:13,250,718...13,258,482 		JBrowse link
G RAD23B RAD23 homolog B, nucleotide excision repair protein acts_upstream_of_or_within
involved_in		 ISO
IEA		 (PMID:12815074) MGI
UniProt		 PMID:12815074 GO_REF:0000043 NCBI chr 9:78,433,461...78,482,157
Ensembl chr 9:106,622,377...106,670,317 		JBrowse link
G RAD50 RAD50 double strand break repair protein acts_upstream_of_or_within
involved_in		 ISO
IEA		 cyclophosphamide RGD
Ensembl
UniProt		 PMID:11056294 GO_REF:0000043 GO_REF:0000107 RGD:727220 NCBI chr 5:127,972,630...128,059,911
Ensembl chr 5:134,134,495...134,222,261 		JBrowse link
G RAD51 RAD51 recombinase involved_in IEA Ensembl
UniProt		 GO_REF:0000043 GO_REF:0000107 NCBI chr15:19,638,310...19,672,474
Ensembl chr15:37,891,056...37,925,207 		JBrowse link
G RAD51AP1 RAD51 associated protein 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr12:4,657,972...4,679,232
Ensembl chr12:4,578,621...4,599,879 		JBrowse link
G RAD51C RAD51 paralog C involved_in IEA UniProt GO_REF:0000043 NCBI chr17:52,769,446...52,808,467
Ensembl chr17:57,621,552...57,660,701 		JBrowse link
G RAD51D RAD51 paralog D acts_upstream_of_or_within
involved_in		 IEA Ensembl
UniProt		 GO_REF:0000043 GO_REF:0000107 NCBI chr17:21,666,236...21,693,886
Ensembl chr17:21,958,212...21,978,406 		JBrowse link
G RAD52 RAD52 homolog, DNA repair protein involved_in IEA UniProt GO_REF:0000043 NCBI chr12:986,372...1,066,708
Ensembl chr12:946,825...985,668 		JBrowse link
G RAD54B RAD54 homolog B acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr 8:90,995,229...91,098,149
Ensembl chr 8:92,939,535...93,034,060 		JBrowse link
G RAD54L RAD54 like acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr 1:45,549,586...45,581,711
Ensembl chr 1:46,905,598...46,936,259 		JBrowse link
G RAD9A RAD9 checkpoint clamp component A involved_in IEA Ensembl GO_REF:0000107 NCBI chr11:62,675,480...62,756,886
Ensembl chr11:66,061,208...66,068,214 		JBrowse link
G RASSF1 Ras association domain family member 1 involved_in ISO (PMID:18566590) UniProt PMID:18566590 NCBI chr 3:50,255,897...50,267,042
Ensembl chr 3:51,491,548...51,502,392 		JBrowse link
G RBBP5 RB binding protein 5, histone lysine methyltransferase complex subunit acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr 1:180,688,220...180,724,087
Ensembl chr 1:184,974,254...185,010,065 		JBrowse link
G RBBP6 RB binding protein 6, ubiquitin ligase involved_in IEA Ensembl GO_REF:0000107 Ensembl chr16:24,787,210...24,818,989 JBrowse link
G RBBP8 RB binding protein 8, endonuclease involved_in IEA UniProt GO_REF:0000043 NCBI chr18:16,181,652...16,274,597
Ensembl chr18:19,811,989...19,903,522 		JBrowse link
G RBM24 RNA binding motif protein 24 involved_in ISO (PMID:24356969) UniProt PMID:24356969 NCBI chr 6:17,140,450...17,153,035 JBrowse link
G RBX1 ring-box 1 involved_in ISO (PMID:22118460) ComplexPortal PMID:22118460 NCBI chr22:21,845,351...21,866,627
Ensembl chr22:39,941,405...39,962,175 		JBrowse link
G REV1 REV1 DNA directed polymerase involved_in IEA UniProt GO_REF:0000043 NCBI chr2A:99,808,519...99,897,989
Ensembl chr2A:100,329,475...100,418,678 		JBrowse link
G REV3L REV3 like, DNA directed polymerase zeta catalytic subunit involved_in IEA UniProt GO_REF:0000043 NCBI chr 6:109,104,341...109,291,268
Ensembl chr 6:113,181,759...113,367,625 		JBrowse link
G RFWD3 ring finger and WD repeat domain 3 involved_in IEA Ensembl
UniProt		 GO_REF:0000043 GO_REF:0000107 NCBI chr16:55,187,178...55,233,265
Ensembl chr16:74,541,450...74,586,951 		JBrowse link
G RIF1 replication timing regulatory factor 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr2B:38,721,658...38,818,488
Ensembl chr2B:155,985,960...156,052,926 		JBrowse link
G RNF138 ring finger protein 138 involved_in IEA UniProt GO_REF:0000043 NCBI chr18:25,300,480...25,340,010 JBrowse link
G RNF168 ring finger protein 168 involved_in IEA Ensembl
UniProt		 GO_REF:0000043 GO_REF:0000107 NCBI chr 3:193,814,785...193,848,620
Ensembl chr 3:203,756,589...203,790,687 		JBrowse link
G RNF169 ring finger protein 169 involved_in IEA Ensembl
UniProt		 GO_REF:0000043 GO_REF:0000107 NCBI chr11:69,821,842...69,909,297
Ensembl chr11:73,126,127...73,207,340 		JBrowse link
G RNF8 ring finger protein 8 involved_in IEA Ensembl
UniProt
InterPro		 GO_REF:0000002 GO_REF:0000043 GO_REF:0000104 GO_REF:0000107 NCBI chr 6:36,918,705...36,955,380
Ensembl chr 6:38,108,414...38,145,949 		JBrowse link
G RPA1 replication protein A1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr17:1,813,610...1,886,093
Ensembl chr17:1,705,380...1,775,596 		JBrowse link
G RPS3 ribosomal protein S3 involved_in ISO PMID:20605787
(PMID:17560175)		 UniProt PMID:17560175 PMID:20605787 RGD:10402036 NCBI chr11:70,460,702...70,466,909
Ensembl chr11:73,762,794...73,768,982 		JBrowse link
G RTEL1 regulator of telomere elongation helicase 1 involved_in IEA UniProt GO_REF:0000043 Ensembl chr20:61,581,331...61,618,718 JBrowse link
G RUVBL1 RuvB like AAA ATPase 1 involved_in IEA UniProt GO_REF:0000043 NCBI chr 3:125,120,524...125,200,859
Ensembl chr 3:132,486,229...132,528,918 		JBrowse link
G RUVBL2 RuvB like AAA ATPase 2 involved_in IEA UniProt GO_REF:0000043 NCBI chr19:45,995,394...46,017,835
Ensembl chr19:54,739,474...54,761,407 		JBrowse link
G SAMHD1 SAM and HD domain containing deoxynucleoside triphosphate triphosphohydrolase 1 involved_in IEA Ensembl
UniProt		 GO_REF:0000043 GO_REF:0000107 NCBI chr20:33,224,200...33,282,018
Ensembl chr20:34,341,367...34,398,314 		JBrowse link
G SETD7 SET domain containing 7, histone lysine methyltransferase acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr 4:131,869,999...131,921,342
Ensembl chr 4:143,167,190...143,227,732 		JBrowse link
G SETX senataxin involved_in IEA Ensembl GO_REF:0000107 NCBI chr 9:103,381,356...103,474,902
Ensembl chr 9:132,016,767...132,109,665 		JBrowse link
G SFPQ splicing factor proline and glutamine rich acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr 1:34,444,105...34,461,012
Ensembl chr 1:35,632,917...35,641,551 		JBrowse link
G SFR1 SWI5 dependent homologous recombination repair protein 1 involved_in IEA UniProt GO_REF:0000043 NCBI chr10:100,721,780...100,726,204
Ensembl chr10:104,180,672...104,184,880 		JBrowse link
G SGK1 serum/glucocorticoid regulated kinase 1 acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr 6:131,936,397...132,082,670
Ensembl chr 6:136,033,851...136,180,121 		JBrowse link
G SHPRH SNF2 histone linker PHD RING helicase involved_in
acts_upstream_of_or_within		 IEA TreeGrafter
Ensembl		 GO_REF:0000107 GO_REF:0000118 NCBI chr 6:143,628,076...143,751,370
Ensembl chr 6:148,388,329...148,457,023 		JBrowse link
G SIRT1 sirtuin 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr10:64,368,878...64,401,684
Ensembl chr10:66,681,598...66,715,069 		JBrowse link
G SIRT4 sirtuin 4 involved_in IEA Ensembl GO_REF:0000107 NCBI chr12:117,867,453...117,887,968
Ensembl chr12:121,241,112...121,261,777 		JBrowse link
G SIRT7 sirtuin 7 involved_in IEA Ensembl GO_REF:0000107 NCBI chr17:76,317,560...76,323,761
Ensembl chr17:82,020,077...82,026,289 		JBrowse link
G SLC25A16 solute carrier family 25 member 16 involved_in IEA UniProt GO_REF:0000043 NCBI chr10:64,898,024...64,956,541
Ensembl chr10:67,506,006...67,549,308
Ensembl chr10:67,506,006...67,549,308 		JBrowse link
G SLF1 SMC5-SMC6 complex localization factor 1 involved_in IEA Ensembl
TreeGrafter		 GO_REF:0000107 GO_REF:0000118 NCBI chr 5:20,660,101...20,757,072
Ensembl chr 5:20,817,614...20,884,453 		JBrowse link
G SLF2 SMC5-SMC6 complex localization factor 2 involved_in IEA Ensembl
TreeGrafter		 GO_REF:0000107 GO_REF:0000118 NCBI chr10:97,511,398...97,566,386
Ensembl chr10:100,989,044...101,042,730 		JBrowse link
G SLFN11 schlafen family member 11 involved_in IEA Ensembl GO_REF:0000107 NCBI chr17:21,412,361...21,436,650
Ensembl chr17:21,715,569...21,727,019 		JBrowse link
G SLX1A SLX1 homolog A, structure-specific endonuclease subunit involved_in IEA UniProt GO_REF:0000043
G SLX4 SLX4 structure-specific endonuclease subunit involved_in IEA UniProt GO_REF:0000043 NCBI chr16:2,502,334...2,532,172
Ensembl chr16:3,678,018...3,707,842 		JBrowse link
G SMARCAD1 SNF2 related chromatin remodeling ATPase with DExD box 1 involved_in IEA UniProt GO_REF:0000043 NCBI chr 4:86,567,722...86,651,527
Ensembl chr 4:97,240,614...97,324,366 		JBrowse link
G SMARCAL1 SNF2 related chromatin remodeling annealing helicase 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr2B:103,672,934...103,743,802
Ensembl chr2B:222,276,353...222,347,258 		JBrowse link
G SMC1A structural maintenance of chromosomes 1A involved_in IEA UniProt GO_REF:0000043 NCBI chr  X:45,576,100...45,637,314
Ensembl chr  X:53,697,154...53,745,636 		JBrowse link
G SMC5 structural maintenance of chromosomes 5 involved_in ISO (PMID:11408570), (PMID:25931565) UniProt PMID:11408570 PMID:25931565 NCBI chr 9:54,446,863...54,543,249 JBrowse link
G SMC6 structural maintenance of chromosomes 6 involved_in IEA Ensembl
UniProt		 GO_REF:0000043 GO_REF:0000107 NCBI chr2A:17,648,371...17,735,910
Ensembl chr2A:17,776,276...17,854,052 		JBrowse link
G SMG1 SMG1 nonsense mediated mRNA decay associated PI3K related kinase involved_in ISO (PMID:15175154) UniProt PMID:15175154 NCBI chr16:19,433,999...19,475,539 JBrowse link
G SMUG1 single-strand-selective monofunctional uracil-DNA glycosylase 1 involved_in IEA UniProt GO_REF:0000043 NCBI chr12:34,564,624...34,572,063
Ensembl chr12:35,288,412...35,296,670 		JBrowse link
G SPDYA speedy/RINGO cell cycle regulator family member A involved_in IEA Ensembl GO_REF:0000107 NCBI chr2A:28,817,415...28,857,149
Ensembl chr2A:28,897,109...28,936,165 		JBrowse link
G SPIDR scaffold protein involved in DNA repair involved_in IEA Ensembl GO_REF:0000107 NCBI chr 8:43,691,454...44,166,259
Ensembl chr 8:41,083,964...41,558,170 		JBrowse link
G SPINDOC spindlin interactor and repressor of chromatin binding involved_in IEA Ensembl GO_REF:0000107 NCBI chr11:59,171,031...59,185,006
Ensembl chr11:62,521,573...62,535,275 		JBrowse link
G SPRTN SprT-like N-terminal domain involved_in IEA Ensembl
UniProt
TreeGrafter
InterPro		 GO_REF:0000002 GO_REF:0000043 GO_REF:0000107 GO_REF:0000117 GO_REF:0000118 NCBI chr 1:206,889,897...206,906,047
Ensembl chr 1:211,914,082...211,931,093 		JBrowse link
G SSRP1 structure specific recognition protein 1 involved_in IEA UniProt GO_REF:0000043 NCBI chr11:52,567,420...52,577,324
Ensembl chr 3:160,057,285...160,068,177 		JBrowse link
G STK11 serine/threonine kinase 11 involved_in IEA Ensembl GO_REF:0000107 Ensembl chr19:1,188,537...1,210,677 JBrowse link
G STK38 serine/threonine kinase 38 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 6:36,056,585...36,110,531
Ensembl chr 6:37,255,183...37,308,102 		JBrowse link
G STXBP4 syntaxin binding protein 4 involved_in IEA Ensembl GO_REF:0000107 NCBI chr17:49,058,071...49,253,448
Ensembl chr17:53,923,387...54,118,415 		JBrowse link
G SUPT16H SPT16 homolog, facilitates chromatin remodeling subunit involved_in IEA UniProt GO_REF:0000043 NCBI chr14:2,169,169...2,201,911
Ensembl chr14:20,247,325...20,280,074 		JBrowse link
G SUSD6 sushi domain containing 6 involved_in IEA Ensembl
TreeGrafter		 GO_REF:0000107 GO_REF:0000118 NCBI chr14:50,205,634...50,309,054
Ensembl chr14:69,123,618...69,180,370 		JBrowse link
G SUV39H1 SUV39H1 histone lysine methyltransferase acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr  X:40,993,911...41,007,362
Ensembl chr  X:48,855,494...48,868,131 		JBrowse link
G SWI5 SWI5 homologous recombination repair protein involved_in IEA UniProt GO_REF:0000043 NCBI chr 9:99,396,439...99,410,054
Ensembl chr 9:128,064,569...128,078,380 		JBrowse link
G TAF1 TATA-box binding protein associated factor 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr  X:60,630,137...60,729,904
Ensembl chr  X:70,684,217...70,782,323 		JBrowse link
G TANK TRAF family member associated NFKB activator involved_in IEA Ensembl GO_REF:0000107 NCBI chr2B:48,426,036...48,525,265
Ensembl chr2B:165,820,833...165,896,438 		JBrowse link
G TAOK1 TAO kinase 1 involved_in IEA Ensembl
UniProt		 GO_REF:0000043 GO_REF:0000107 NCBI chr17:27,222,725...27,385,713
Ensembl chr17:27,746,797...27,840,623 		JBrowse link
G TAOK2 TAO kinase 2 involved_in IEA Ensembl GO_REF:0000107 Ensembl chr16:30,347,229...30,366,743 JBrowse link
G TAOK3 TAO kinase 3 involved_in IEA Ensembl
UniProt		 GO_REF:0000043 GO_REF:0000107 NCBI chr12:115,730,619...115,954,149
Ensembl chr12:119,109,642...119,226,502 		JBrowse link
G TDG thymine DNA glycosylase involved_in IEA UniProt GO_REF:0000043 NCBI chr12:101,543,945...101,567,035
Ensembl chr12:104,938,519...104,961,284 		JBrowse link
G TDP1 tyrosyl-DNA phosphodiesterase 1 involved_in IEA UniProt GO_REF:0000043 NCBI chr14:70,574,066...70,662,562
Ensembl chr14:89,926,462...90,014,802 		JBrowse link
G TDP2 tyrosyl-DNA phosphodiesterase 2 involved_in IEA UniProt GO_REF:0000043 NCBI chr 6:24,487,551...24,505,268
Ensembl chr 6:24,819,494...24,837,189 		JBrowse link
G TFDP3 transcription factor Dp family member 3 involved_in ISO (PMID:20559320) UniProt PMID:20559320 NCBI chr  X:122,356,501...122,358,710 JBrowse link
G TIGAR TP53 induced glycolysis regulatory phosphatase involved_in IEA Ensembl GO_REF:0000107 NCBI chr12:4,429,945...4,462,142
Ensembl chr12:4,353,272...4,385,380 		JBrowse link
G TIMELESS timeless circadian regulator involved_in IEA Ensembl GO_REF:0000107 NCBI chr12:32,465,529...32,497,581
Ensembl chr12:32,718,649...32,750,728 		JBrowse link
G TIPIN TIMELESS interacting protein involved_in IEA UniProt
InterPro		 GO_REF:0000002 GO_REF:0000043 NCBI chr15:45,290,350...45,310,335
Ensembl chr15:63,566,463...63,585,717 		JBrowse link
G TLK2 tousled like kinase 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chr17:56,542,670...56,678,294
Ensembl chr17:61,689,998...61,830,394 		JBrowse link
G TONSL tonsoku like, DNA repair protein involved_in IEA UniProt GO_REF:0000043 NCBI chr 8:141,195,959...141,211,849
Ensembl chr 8:144,185,674...144,201,040 		JBrowse link
G TOP2A DNA topoisomerase II alpha involved_in IEA Ensembl GO_REF:0000107 NCBI chr17:16,872,169...16,901,605
Ensembl chr17:17,097,778...17,126,207 		JBrowse link
G TOPBP1 DNA topoisomerase II binding protein 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 3:130,667,998...130,729,569
Ensembl chr 3:138,143,893...138,203,363 		JBrowse link
G TOPORS TOP1 binding arginine/serine rich protein, E3 ubiquitin ligase involved_in
acts_upstream_of_or_within		 IEA Ensembl GO_REF:0000107 NCBI chr 9:32,314,850...32,327,067
Ensembl chr 9:33,124,730...33,135,129 		JBrowse link
G TP53 tumor protein p53 acts_upstream_of_or_within
involved_in		 IEA
ISO		 (PMID:24356969)
(PMID:15710329), (PMID:17938203), (PMID:30089260)		 Ensembl
UniProt
BHF-UCL		 PMID:15710329 PMID:17938203 PMID:24356969 PMID:30089260 GO_REF:0000107 NCBI chr17:7,699,449...7,717,812
Ensembl chr17:7,684,922...7,706,120 		JBrowse link
G TP53BP1 tumor protein p53 binding protein 1 involved_in
acts_upstream_of_or_within		 IEA UniProt
Ensembl		 GO_REF:0000043 GO_REF:0000107 NCBI chr15:22,364,696...22,472,499
Ensembl chr15:40,519,012...40,626,741 		JBrowse link
G TP63 tumor protein p63 involved_in ISO (PMID:19451233) UniProt PMID:19451233 NCBI chr 3:186,651,879...186,918,300
Ensembl chr 3:195,199,167...195,474,104 		JBrowse link
G TP73 tumor protein p73 involved_in
acts_upstream_of_or_within		 IEA Ensembl GO_REF:0000107 NCBI chr 1:2,323,399...2,405,295
Ensembl chr 1:3,476,064...3,529,206 		JBrowse link
G TRAIP TRAF interacting protein involved_in IEA Ensembl GO_REF:0000107 NCBI chr 3:49,760,528...49,789,637
Ensembl chr 3:50,996,647...51,025,241 		JBrowse link
G TREX1 three prime repair exonuclease 1 acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr 3:48,387,762...48,389,693
Ensembl chr 3:49,470,222...49,471,331 		JBrowse link
G TRIP12 thyroid hormone receptor interactor 12 involved_in IEA TreeGrafter
UniProt		 GO_REF:0000043 GO_REF:0000118 NCBI chr2B:117,013,343...117,175,296
Ensembl chr2B:235,820,182...235,979,780 		JBrowse link
G TTC5 tetratricopeptide repeat domain 5 involved_in IEA Ensembl GO_REF:0000107 NCBI chr14:1,163,280...1,180,212
Ensembl chr14:19,216,993...19,233,797 		JBrowse link
G UBA1 ubiquitin like modifier activating enzyme 1 involved_in IEA Ensembl
TreeGrafter		 GO_REF:0000107 GO_REF:0000118 NCBI chr  X:39,627,753...39,652,023
Ensembl chr  X:47,493,331...47,509,654 		JBrowse link
G UBA7 ubiquitin like modifier activating enzyme 7 involved_in IEA TreeGrafter GO_REF:0000118 NCBI chr 3:49,737,015...49,745,783
Ensembl chr 3:50,973,211...50,981,997 		JBrowse link
G UBE2A ubiquitin conjugating enzyme E2 A involved_in IEA Ensembl GO_REF:0000107 NCBI chr  X:108,606,271...108,617,000
Ensembl chr  X:119,034,235...119,049,655 		JBrowse link
G UBE2B ubiquitin conjugating enzyme E2 B involved_in IEA Ensembl GO_REF:0000107 NCBI chr 5:129,775,011...129,794,853
Ensembl chr 5:135,925,217...135,944,609 		JBrowse link
G UBE2E2 ubiquitin conjugating enzyme E2 E2 acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr 3:23,121,699...23,502,329
Ensembl chr 3:23,446,158...23,825,277 		JBrowse link
G UBE2T ubiquitin conjugating enzyme E2 T involved_in IEA Ensembl GO_REF:0000107 NCBI chr 1:177,929,298...177,939,027
Ensembl chr 1:182,227,166...182,236,712 		JBrowse link
G UBQLN4 ubiquilin 4 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 1:131,374,635...131,395,986
Ensembl chr 1:135,209,490...135,225,666 		JBrowse link
G UBR5 ubiquitin protein ligase E3 component n-recognin 5 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 8:98,904,557...99,064,121
Ensembl chr 8:101,067,435...101,224,913 		JBrowse link
G UFL1 UFM1 specific ligase 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 6:94,356,440...94,389,920
Ensembl chr 6:98,242,756...98,274,377 		JBrowse link
G UIMC1 ubiquitin interaction motif containing 1 involved_in IEA UniProt GO_REF:0000043 NCBI chr 5:172,205,958...172,321,758
Ensembl chr 5:179,271,577...179,374,229 		JBrowse link
G UNG uracil DNA glycosylase involved_in IEA UniProt GO_REF:0000043 NCBI chr12:106,674,073...106,687,054
Ensembl chr12:110,067,879...110,080,891 		JBrowse link
G USP10 ubiquitin specific peptidase 10 involved_in IEA Ensembl
UniProt		 GO_REF:0000043 GO_REF:0000107 NCBI chr16:65,367,463...65,447,549
Ensembl chr16:84,712,913...84,787,714 		JBrowse link
G USP16 ubiquitin specific peptidase 16 involved_in IEA Ensembl GO_REF:0000107 NCBI chr21:15,455,805...15,487,853
Ensembl chr21:28,843,749...28,876,267 		JBrowse link
G USP28 ubiquitin specific peptidase 28 involved_in ISO (PMID:17873522) UniProt PMID:17873522 NCBI chr11:108,676,566...108,754,372
Ensembl chr11:112,517,693...112,595,585 		JBrowse link
G USP47 ubiquitin specific peptidase 47 involved_in IEA Ensembl GO_REF:0000107 NCBI chr11:12,009,770...12,127,425
Ensembl chr11:11,703,617...11,821,074 		JBrowse link
G USP51 ubiquitin specific peptidase 51 involved_in ISO (PMID:27083998), (PMID:34188037) UniProt PMID:27083998 PMID:34188037 NCBI chr  X:47,747,547...47,753,119 JBrowse link
G VAV3 vav guanine nucleotide exchange factor 3 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 1:110,101,651...110,531,294
Ensembl chr 1:109,210,813...109,617,658 		JBrowse link
G VCP valosin containing protein involved_in IEA Ensembl
UniProt		 GO_REF:0000043 GO_REF:0000107 NCBI chr 9:34,907,147...34,923,227
Ensembl chr 9:35,712,937...35,729,588 		JBrowse link
G VCPIP1 valosin containing protein interacting protein 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 8:63,173,116...63,210,119
Ensembl chr 8:64,842,479...64,874,818 		JBrowse link
G VRK1 VRK serine/threonine kinase 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr14:77,429,970...77,514,217
Ensembl chr14:96,756,397...96,831,954 		JBrowse link
G WAC WW domain containing adaptor with coiled-coil involved_in IEA Ensembl GO_REF:0000107 NCBI chr10:28,685,294...28,777,176
Ensembl chr10:29,042,331...29,130,591 		JBrowse link
G WDR48 WD repeat domain 48 acts_upstream_of_or_within
involved_in		 IEA Ensembl GO_REF:0000107 NCBI chr 3:38,948,440...38,992,872
Ensembl chr 3:39,228,920...39,273,300 		JBrowse link
G WDR76 WD repeat domain 76 involved_in IEA Ensembl GO_REF:0000107 NCBI chr15:22,786,956...22,828,496
Ensembl chr15:40,877,721...40,918,519 		JBrowse link
G WRN WRN RecQ like helicase involved_in IEA Ensembl GO_REF:0000107 NCBI chr 8:30,353,643...30,492,978
Ensembl chr 8:27,541,145...27,679,855 		JBrowse link
G XIAP X-linked inhibitor of apoptosis involved_in IEA Ensembl GO_REF:0000107 NCBI chr  X:113,052,164...113,105,160
Ensembl chr  X:123,232,643...123,278,606 		JBrowse link
G XPA XPA, DNA damage recognition and repair factor involved_in IEA UniProt GO_REF:0000043 NCBI chr 9:68,726,723...68,788,049
Ensembl chr 9:96,886,795...96,909,254 		JBrowse link
G XPC XPC complex subunit, DNA damage recognition and repair factor involved_in
acts_upstream_of_or_within		 IEA UniProt
Ensembl		 GO_REF:0000043 GO_REF:0000107 NCBI chr 3:14,063,499...14,097,023
Ensembl chr 3:14,403,958...14,437,377 		JBrowse link
G XRCC1 X-ray repair cross complementing 1 involved_in ISO
IEA		 RGD
UniProt		 PMID:11056294 GO_REF:0000043 RGD:727220 NCBI chr19:40,485,052...40,522,188
Ensembl chr19:49,094,014...49,125,520 		JBrowse link
G XRCC2 X-ray repair cross complementing 2 acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr 7:144,229,031...144,256,854
Ensembl chr 7:156,378,685...156,406,516 		JBrowse link
G XRCC3 X-ray repair cross complementing 3 involved_in IEA UniProt GO_REF:0000043 NCBI chr14:84,323,644...84,341,763
Ensembl chr14:104,131,903...104,149,037 		JBrowse link
G XRCC4 X-ray repair cross complementing 4 involved_in IEA UniProt GO_REF:0000043 NCBI chr 5:31,927,463...32,202,394
Ensembl chr 5:32,246,320...32,521,490 		JBrowse link
G XRCC5 X-ray repair cross complementing 5 involved_in IEA Ensembl
UniProt		 GO_REF:0000043 GO_REF:0000107 NCBI chr2B:103,371,459...103,468,419
Ensembl chr2B:221,972,742...222,071,235 		JBrowse link
G XRCC6 X-ray repair cross complementing 6 acts_upstream_of_or_within
involved_in		 ISO
IEA		 (PMID:15979950) MGI
UniProt		 PMID:15979950 GO_REF:0000043 NCBI chr22:22,516,281...22,557,379
Ensembl chr22:40,603,038...40,643,314 		JBrowse link
G YAP1 Yes1 associated transcriptional regulator involved_in IEA Ensembl GO_REF:0000107 NCBI chr11:97,061,367...97,186,961
Ensembl chr11:100,552,424...100,681,301 		JBrowse link
G YY1 YY1 transcription factor involved_in ISO (PMID:18026119) UniProt PMID:18026119 NCBI chr14:80,859,491...80,903,651 JBrowse link
G ZBTB1 zinc finger and BTB domain containing 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr14:45,085,146...45,114,965
Ensembl chr14:63,354,458...63,359,403 		JBrowse link
G ZBTB38 zinc finger and BTB domain containing 38 involved_in ISO (PMID:24726359) UniProt PMID:24726359 NCBI chr 3:138,401,279...138,481,969 JBrowse link
G ZBTB4 zinc finger and BTB domain containing 4 involved_in IEA Ensembl GO_REF:0000107 NCBI chr17:7,491,971...7,516,823
Ensembl chr17:7,477,848...7,497,062 		JBrowse link
G ZBTB40 zinc finger and BTB domain containing 40 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 1:21,635,197...21,714,180
Ensembl chr 1:22,622,663...22,658,963 		JBrowse link
G ZC3H12A zinc finger CCCH-type containing 12A involved_in IEA Ensembl GO_REF:0000107 NCBI chr 1:36,743,341...36,753,261
Ensembl chr 1:38,093,917...38,103,556 		JBrowse link
G ZDHHC16 zDHHC palmitoyltransferase 16 involved_in IEA Ensembl GO_REF:0000107 NCBI chr10:94,068,816...94,079,732
Ensembl chr10:97,562,379...97,573,305 		JBrowse link
G ZMPSTE24 zinc metallopeptidase STE24 acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr 1:39,545,264...39,589,721
Ensembl chr 1:40,869,076...40,912,747 		JBrowse link
G ZNF385A zinc finger protein 385A involved_in IEA Ensembl GO_REF:0000107 NCBI chr12:34,353,975...34,376,172
Ensembl chr12:35,080,820...35,102,248 		JBrowse link
G ZNF432 zinc finger protein 432 involved_in IEA Ensembl GO_REF:0000107 NCBI chr19:48,976,100...48,994,895
Ensembl chr19:57,856,875...57,872,510 		JBrowse link
G ZRANB3 zinc finger RANBP2-type containing 3 involved_in IEA Ensembl GO_REF:0000107 NCBI chr2B:24,331,731...24,665,652
Ensembl chr2B:139,234,909...139,577,193 		JBrowse link
base-excision repair term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G APEX1 apurinic/apyrimidinic endodeoxyribonuclease 1 involved_in IEA TreeGrafter
Ensembl		 GO_REF:0000107 GO_REF:0000118 NCBI chr14:1,329,745...1,332,315
Ensembl chr14:19,381,911...19,384,542 		JBrowse link
G APEX2 apurinic/apyrimidinic endodeoxyribonuclease 2 involved_in IEA TreeGrafter GO_REF:0000118 NCBI chr  X:47,210,552...47,218,320
Ensembl chr  X:55,442,599...55,450,402 		JBrowse link
G ERCC6 ERCC excision repair 6, chromatin remodeling factor involved_in IEA Ensembl GO_REF:0000107 NCBI chr10:44,703,720...44,784,948 JBrowse link
G FEN1 flap structure-specific endonuclease 1 involved_in IEA UniProt GO_REF:0000104 NCBI chr11:57,092,270...57,096,828
Ensembl chr11:60,455,474...60,456,616 		JBrowse link
G HMGA1 high mobility group AT-hook 1 involved_in ISO (PMID:19465398) UniProt PMID:19465398 NCBI chr 6:33,807,171...33,816,603 JBrowse link
G HMGA2 high mobility group AT-hook 2 involved_in ISO (PMID:19465398) UniProt PMID:19465398 NCBI chr12:22,954,946...23,096,623 JBrowse link
G HMGB1 high mobility group box 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr13:11,737,942...11,894,923
Ensembl chr13:30,174,899...30,179,527 		JBrowse link
G HUWE1 HECT, UBA and WWE domain containing E3 ubiquitin protein ligase 1 involved_in IEA Ensembl
TreeGrafter		 GO_REF:0000107 GO_REF:0000118 NCBI chr  X:45,746,228...45,897,250
Ensembl chr  X:53,855,404...54,005,366 		JBrowse link
G LIG1 DNA ligase 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr19:45,056,737...45,110,867
Ensembl chr19:53,706,778...53,761,088 		JBrowse link
G LIG3 DNA ligase 3 involved_in IEA Ensembl GO_REF:0000107 NCBI chr17:21,776,483...21,805,706
Ensembl chr17:22,074,046...22,095,220 		JBrowse link
G LIG4 DNA ligase 4 involved_in IEA Ensembl GO_REF:0000107 NCBI chr13:89,336,434...89,347,418
Ensembl chr13:108,475,820...108,478,555 		JBrowse link
G MPG N-methylpurine DNA glycosylase involved_in
acts_upstream_of_or_within		 IEA InterPro
Ensembl
TreeGrafter		 GO_REF:0000002 GO_REF:0000107 GO_REF:0000118 Ensembl chr16:70,655...76,763 JBrowse link
G MUTYH mutY DNA glycosylase involved_in IEA UniProt
TreeGrafter
InterPro		 GO_REF:0000002 GO_REF:0000104 GO_REF:0000118 NCBI chr 1:44,632,102...44,643,292
Ensembl chr 1:45,990,588...46,002,645 		JBrowse link
G NEIL1 nei like DNA glycosylase 1 involved_in IEA Ensembl
TreeGrafter
InterPro		 GO_REF:0000002 GO_REF:0000107 GO_REF:0000118 NCBI chr15:54,263,424...54,271,601
Ensembl chr15:73,858,910...73,867,474 		JBrowse link
G NEIL2 nei like DNA glycosylase 2 involved_in IEA InterPro GO_REF:0000002 NCBI chr 8:7,415,540...7,433,270 JBrowse link
G NEIL3 nei like DNA glycosylase 3 involved_in IEA InterPro
TreeGrafter
Ensembl		 GO_REF:0000002 GO_REF:0000107 GO_REF:0000118 NCBI chr 4:169,503,942...169,556,654
Ensembl chr 4:181,738,803...181,795,082 		JBrowse link
G NTHL1 nth like DNA glycosylase 1 involved_in IEA InterPro GO_REF:0000002 NCBI chr16:655,433...663,521
Ensembl chr16:2,127,858...2,135,656 		JBrowse link
G OGG1 8-oxoguanine DNA glycosylase acts_upstream_of_or_within
involved_in		 ISO
IEA		 RGD
Ensembl
InterPro		 PMID:9801319 GO_REF:0000002 GO_REF:0000107 RGD:729091 NCBI chr 3:9,702,311...9,742,283
Ensembl chr 3:9,940,955...9,947,335 		JBrowse link
G PARP1 poly(ADP-ribose) polymerase 1 acts_upstream_of_or_within ISO (PMID:11948190) MGI PMID:11948190 NCBI chr 1:201,820,355...201,867,673
Ensembl chr 1:206,812,981...206,860,356 		JBrowse link
G PARP2 poly(ADP-ribose) polymerase 2 acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr14:1,215,727...1,230,006
Ensembl chr14:19,269,046...19,282,853 		JBrowse link
G POLB DNA polymerase beta involved_in IEA Ensembl
TreeGrafter		 GO_REF:0000107 GO_REF:0000118 NCBI chr 8:41,582,370...41,615,950
Ensembl chr 8:39,026,991...39,060,464 		JBrowse link
G POLG DNA polymerase gamma, catalytic subunit involved_in IEA Ensembl GO_REF:0000107 NCBI chr15:68,008,214...68,028,241
Ensembl chr15:87,214,451...87,234,739 		JBrowse link
G POLQ DNA polymerase theta involved_in IEA Ensembl GO_REF:0000107 NCBI chr 3:118,535,968...118,648,275
Ensembl chr 3:125,446,829...125,559,283 		JBrowse link
G RPA1 replication protein A1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr17:1,813,610...1,886,093
Ensembl chr17:1,705,380...1,775,596 		JBrowse link
G RPA2 replication protein A2 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 1:27,151,784...27,175,110
Ensembl chr 1:28,191,731...28,214,666 		JBrowse link
G RPA3 replication protein A3 involved_in IEA Ensembl
TreeGrafter		 GO_REF:0000107 GO_REF:0000118 NCBI chr 7:8,361,623...8,365,098
Ensembl chr 7:7,713,629...7,717,169 		JBrowse link
G RPS3 ribosomal protein S3 involved_in ISO (PMID:15518571) GO_Central PMID:15518571 NCBI chr11:70,460,702...70,466,909
Ensembl chr11:73,762,794...73,768,982 		JBrowse link
G SIRT6 sirtuin 6 involved_in ISO (PMID:16439206) CACAO PMID:16439206 NCBI chr19:3,196,092...3,204,602
Ensembl chr19:4,146,057...4,154,126 		JBrowse link
G SLC25A16 solute carrier family 25 member 16 involved_in IEA Ensembl GO_REF:0000107 NCBI chr10:64,898,024...64,956,541
Ensembl chr10:67,506,006...67,549,308
Ensembl chr10:67,506,006...67,549,308 		JBrowse link
G SMUG1 single-strand-selective monofunctional uracil-DNA glycosylase 1 involved_in IEA InterPro
Ensembl		 GO_REF:0000002 GO_REF:0000107 NCBI chr12:34,564,624...34,572,063
Ensembl chr12:35,288,412...35,296,670 		JBrowse link
G TDG thymine DNA glycosylase involved_in IEA Ensembl GO_REF:0000107 NCBI chr12:101,543,945...101,567,035
Ensembl chr12:104,938,519...104,961,284 		JBrowse link
G UNG uracil DNA glycosylase involved_in ISO
IEA		 RGD
UniProt
InterPro		 PMID:12167490 GO_REF:0000002 GO_REF:0000104 RGD:634481 NCBI chr12:106,674,073...106,687,054
Ensembl chr12:110,067,879...110,080,891 		JBrowse link
G USP47 ubiquitin specific peptidase 47 involved_in IEA Ensembl GO_REF:0000107 NCBI chr11:12,009,770...12,127,425
Ensembl chr11:11,703,617...11,821,074 		JBrowse link
G WRN WRN RecQ like helicase involved_in IEA Ensembl GO_REF:0000107 NCBI chr 8:30,353,643...30,492,978
Ensembl chr 8:27,541,145...27,679,855 		JBrowse link
G XPA XPA, DNA damage recognition and repair factor involved_in IEA TreeGrafter GO_REF:0000118 NCBI chr 9:68,726,723...68,788,049
Ensembl chr 9:96,886,795...96,909,254 		JBrowse link
G XRCC1 X-ray repair cross complementing 1 involved_in ISO
IEA		 RGD
TreeGrafter
Ensembl
InterPro		 PMID:17412650 GO_REF:0000002 GO_REF:0000107 GO_REF:0000118 RGD:2302580 NCBI chr19:40,485,052...40,522,188
Ensembl chr19:49,094,014...49,125,520 		JBrowse link
G XRCC4 X-ray repair cross complementing 4 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 5:31,927,463...32,202,394
Ensembl chr 5:32,246,320...32,521,490 		JBrowse link
base-excision repair, AP site formation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ERCC5 ERCC excision repair 5, endonuclease involved_in ISO (PMID:9927729) UniProt PMID:9927729 NCBI chr13:84,005,950...84,036,710
Ensembl chr13:103,096,344...103,174,182 		JBrowse link
G LOC100989432 G/T mismatch-specific thymine DNA glycosylase-like involved_in IEA InterPro
TreeGrafter		 GO_REF:0000002 GO_REF:0000118 NCBI chr12:60,514,718...60,516,287 JBrowse link
G NTHL1 nth like DNA glycosylase 1 involved_in IEA InterPro
TreeGrafter
UniProt
Ensembl		 GO_REF:0000002 GO_REF:0000104 GO_REF:0000107 GO_REF:0000118 NCBI chr16:655,433...663,521
Ensembl chr16:2,127,858...2,135,656 		JBrowse link
G OGG1 8-oxoguanine DNA glycosylase involved_in IEA TreeGrafter GO_REF:0000118 NCBI chr 3:9,702,311...9,742,283
Ensembl chr 3:9,940,955...9,947,335 		JBrowse link
G TDG thymine DNA glycosylase involved_in IEA InterPro
TreeGrafter		 GO_REF:0000002 GO_REF:0000118 NCBI chr12:101,543,945...101,567,035
Ensembl chr12:104,938,519...104,961,284 		JBrowse link
base-excision repair, AP site formation via deaminated base removal term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G UNG uracil DNA glycosylase involved_in IEA Ensembl
TreeGrafter		 GO_REF:0000107 GO_REF:0000118 NCBI chr12:106,674,073...106,687,054
Ensembl chr12:110,067,879...110,080,891 		JBrowse link
base-excision repair, gap-filling term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G PCNA proliferating cell nuclear antigen acts_upstream_of_or_within ISO (PMID:15177179) MGI PMID:15177179 NCBI chr20:5,134,930...5,146,603
Ensembl chr20:4,927,731...4,939,440 		JBrowse link
G POLB DNA polymerase beta acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr 8:41,582,370...41,615,950
Ensembl chr 8:39,026,991...39,060,464 		JBrowse link
G POLD1 DNA polymerase delta 1, catalytic subunit involved_in
acts_upstream_of_or_within		 IEA TreeGrafter
Ensembl		 GO_REF:0000107 GO_REF:0000118 NCBI chr19:47,347,919...47,381,772
Ensembl chr19:56,251,356...56,297,611 		JBrowse link
G POLE DNA polymerase epsilon, catalytic subunit involved_in IEA Ensembl
TreeGrafter		 GO_REF:0000107 GO_REF:0000118 NCBI chr12:129,975,750...130,038,402
Ensembl chr12:134,695,976...134,758,650 		JBrowse link
G POLG DNA polymerase gamma, catalytic subunit acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr15:68,008,214...68,028,241
Ensembl chr15:87,214,451...87,234,739 		JBrowse link
G POLL DNA polymerase lambda involved_in IEA Ensembl GO_REF:0000107 NCBI chr10:98,181,049...98,190,463
Ensembl chr10:101,653,978...101,663,360 		JBrowse link
G SPIB Spi-B transcription factor involved_in IEA TreeGrafter GO_REF:0000118 NCBI chr19:47,382,653...47,395,178
Ensembl chr19:56,251,356...56,297,611 		JBrowse link
broken chromosome clustering term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G CIP2A cellular inhibitor of PP2A involved_in IEA Ensembl GO_REF:0000107 NCBI chr 3:105,668,385...105,714,487
Ensembl chr 3:112,606,933...112,646,345 		JBrowse link
G TOPBP1 DNA topoisomerase II binding protein 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 3:130,667,998...130,729,569
Ensembl chr 3:138,143,893...138,203,363 		JBrowse link
DNA alkylation repair term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ALKBH2 alkB homolog 2, alpha-ketoglutarate dependent dioxygenase involved_in IEA Ensembl
TreeGrafter		 GO_REF:0000107 GO_REF:0000118 NCBI chr12:106,664,678...106,670,558
Ensembl chr12:110,058,507...110,063,946 		JBrowse link
G ALKBH3 alkB homolog 3, alpha-ketoglutarate dependent dioxygenase involved_in IEA InterPro
Ensembl		 GO_REF:0000002 GO_REF:0000107 NCBI chr11:43,841,083...43,880,608
Ensembl chr11:44,336,655...44,376,057 		JBrowse link
G ASCC1 activating signal cointegrator 1 complex subunit 1 involved_in IEA InterPro GO_REF:0000002 NCBI chr10:68,646,113...68,740,097
Ensembl chr10:71,082,355...71,207,096 		JBrowse link
G ASCC3 activating signal cointegrator 1 complex subunit 3 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 6:98,345,023...98,720,332
Ensembl chr 6:102,224,820...102,599,521 		JBrowse link
G FTO FTO alpha-ketoglutarate dependent dioxygenase involved_in IEA InterPro
Ensembl		 GO_REF:0000002 GO_REF:0000107 NCBI chr16:33,939,300...34,343,419
Ensembl chr16:53,023,425...53,490,231 		JBrowse link
G MGMT O-6-methylguanine-DNA methyltransferase acts_upstream_of_or_within ISO
IEA		 RGD
Ensembl		 PMID:15025514 GO_REF:0000107 RGD:2316914 NCBI chr10:126,059,701...126,365,850
Ensembl chr10:130,305,485...130,609,422 		JBrowse link
G OTUD4 OTU deubiquitinase 4 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 4:137,480,809...137,527,651
Ensembl chr 4:149,135,900...149,182,476 		JBrowse link
G USP7 ubiquitin specific peptidase 7 involved_in IEA Ensembl GO_REF:0000107 NCBI chr16:7,825,332...7,895,095
Ensembl chr16:9,065,858...9,106,146 		JBrowse link
G USP9X ubiquitin specific peptidase 9 X-linked involved_in IEA Ensembl GO_REF:0000107 NCBI chr  X:33,535,543...33,683,220
Ensembl chr  X:41,232,041...41,379,910 		JBrowse link
DNA damage checkpoint signaling term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ATM ATM serine/threonine kinase involved_in
acts_upstream_of_or_within		 IEA Ensembl GO_REF:0000107 NCBI chr11:103,109,979...103,256,405
Ensembl chr11:106,584,228...106,727,041 		JBrowse link
G ATR ATR serine/threonine kinase involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:12937170) Ensembl
TreeGrafter
MGI		 PMID:12937170 GO_REF:0000107 GO_REF:0000118 NCBI chr 3:139,482,606...139,612,274
Ensembl chr 3:147,075,185...147,196,261 		JBrowse link
G ATRIP ATR interacting protein involved_in IEA InterPro GO_REF:0000002 NCBI chr 3:48,368,775...48,387,698
Ensembl chr 3:49,450,991...49,469,351 		JBrowse link
G CDC5L cell division cycle 5 like involved_in IEA Ensembl GO_REF:0000107 NCBI chr 6:43,983,840...44,043,029
Ensembl chr 6:45,265,845...45,326,383 		JBrowse link
G CHEK1 checkpoint kinase 1 involved_in
acts_upstream_of_or_within		 IEA InterPro
Ensembl		 GO_REF:0000002 GO_REF:0000107 NCBI chr11:120,446,352...120,478,207
Ensembl chr11:124,359,218...124,390,981 		JBrowse link
G CHEK2 checkpoint kinase 2 ISO RGD PMID:10435585 RGD:633752 NCBI chr22:9,757,038...9,811,171 JBrowse link
G CLOCK clock circadian regulator involved_in IEA Ensembl GO_REF:0000107 NCBI chr 4:68,391,310...68,509,813
Ensembl chr 4:75,018,898...75,066,726 		JBrowse link
G CLSPN claspin involved_in IEA Ensembl GO_REF:0000107 NCBI chr 1:34,991,082...35,040,515
Ensembl chr 1:36,182,726...36,218,544 		JBrowse link
G DONSON DNA replication fork stabilization factor DONSON involved_in IEA Ensembl GO_REF:0000107 NCBI chr21:19,944,692...19,956,140
Ensembl chr21:33,317,841...33,328,132 		JBrowse link
G DOT1L DOT1 like histone lysine methyltransferase involved_in IEA UniProt
TreeGrafter		 GO_REF:0000104 GO_REF:0000118 NCBI chr19:1,173,915...1,243,633
Ensembl chr19:2,147,031...2,210,039 		JBrowse link
G DTX3L deltex E3 ubiquitin ligase 3L involved_in IEA Ensembl GO_REF:0000107 NCBI chr 3:119,654,019...119,664,918
Ensembl chr 3:126,558,924...126,569,807 		JBrowse link
G E2F1 E2F transcription factor 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr20:29,963,083...29,973,860
Ensembl chr20:31,103,764...31,110,604 		JBrowse link
G EIF2AK4 eukaryotic translation initiation factor 2 alpha kinase 4 involved_in IEA InterPro GO_REF:0000002 NCBI chr15:18,871,867...18,973,380
Ensembl chr15:37,120,044...37,229,211 		JBrowse link
G ERCC6 ERCC excision repair 6, chromatin remodeling factor involved_in IEA Ensembl GO_REF:0000107 NCBI chr10:44,703,720...44,784,948 JBrowse link
G GNB1L G protein subunit beta 1 like involved_in IEA Ensembl GO_REF:0000107 NCBI chr22:2,542,925...2,616,201
Ensembl chr22:18,222,195...18,289,580 		JBrowse link
G HINFP histone H4 transcription factor involved_in IEA Ensembl GO_REF:0000107 NCBI chr11:113,959,670...113,973,781
Ensembl chr11:117,888,855...117,902,184 		JBrowse link
G HUS1 HUS1 checkpoint clamp component involved_in
acts_upstream_of_or_within		 IEA InterPro
Ensembl		 GO_REF:0000002 GO_REF:0000107 NCBI chr 7:48,606,848...48,622,194
Ensembl chr 7:48,714,668...48,731,005 		JBrowse link
G HUS1B HUS1 checkpoint clamp component B involved_in IEA InterPro GO_REF:0000002 NCBI chr 6:466,508...469,590
Ensembl chr 6:601,288...602,124 		JBrowse link
G INTS7 integrator complex subunit 7 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 1:187,508,066...187,603,567
Ensembl chr 1:192,372,016...192,466,510 		JBrowse link
G LOC100994157 histone H2AX involved_in
NOT|acts_upstream_of_or_within		 ISO (PMID:17974976)
(PMID:11934988)		 UniProt
MGI		 PMID:11934988 PMID:17974976 NCBI chr11:113,932,078...113,933,679 JBrowse link
G LYN LYN proto-oncogene, Src family tyrosine kinase involved_in IEA Ensembl GO_REF:0000107 NCBI chr 8:52,318,497...52,455,741
Ensembl chr 8:49,755,708...49,825,287 		JBrowse link
G MAP3K20 mitogen-activated protein kinase kinase kinase 20 involved_in IEA Ensembl GO_REF:0000107 NCBI chr2B:60,362,635...60,555,445
Ensembl chr2B:177,818,344...178,010,556 		JBrowse link
G MAPK14 mitogen-activated protein kinase 14 acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr 6:35,586,847...35,683,041
Ensembl chr 6:36,788,233...36,871,114 		JBrowse link
G NBN nibrin acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr 8:86,622,797...86,674,202
Ensembl chr 8:88,575,198...88,626,307 		JBrowse link
G PARP9 poly(ADP-ribose) polymerase family member 9 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 3:119,617,722...119,655,039
Ensembl chr 3:126,522,859...126,559,647 		JBrowse link
G PRPF19 pre-mRNA processing factor 19 involved_in IEA Ensembl GO_REF:0000107 NCBI chr11:56,153,965...56,169,821
Ensembl chr11:59,595,120...59,607,828 		JBrowse link
G PTPN11 protein tyrosine phosphatase non-receptor type 11 acts_upstream_of_or_within ISO (PMID:12937170) MGI PMID:12937170 NCBI chr12:110,016,364...110,107,462
Ensembl chr12:113,435,669...113,503,762 		JBrowse link
G RAD1 RAD1 checkpoint DNA exonuclease involved_in IEA Ensembl
TreeGrafter
InterPro		 GO_REF:0000002 GO_REF:0000107 GO_REF:0000118 NCBI chr 5:75,452,153...75,465,022
Ensembl chr 5:80,732,954...80,744,448 		JBrowse link
G RAD17 RAD17 checkpoint clamp loader component involved_in IEA InterPro
TreeGrafter		 GO_REF:0000002 GO_REF:0000118 NCBI chr 5:44,586,083...44,630,719
Ensembl chr 5:46,156,294...46,202,197 		JBrowse link
G RAD9A RAD9 checkpoint clamp component A involved_in IEA Ensembl
InterPro		 GO_REF:0000002 GO_REF:0000107 NCBI chr11:62,675,480...62,756,886
Ensembl chr11:66,061,208...66,068,214 		JBrowse link
G RAD9B RAD9 checkpoint clamp component B involved_in IEA InterPro GO_REF:0000002 NCBI chr12:108,072,061...108,103,338
Ensembl chr12:111,467,845...111,498,350 		JBrowse link
G RHNO1 RAD9-HUS1-RAD1 interacting nuclear orphan 1 involved_in IEA InterPro
TreeGrafter
Ensembl		 GO_REF:0000002 GO_REF:0000107 GO_REF:0000118 NCBI chr12:2,999,089...3,011,911
Ensembl chr12:2,930,957...2,943,419 		JBrowse link
G RPA4 replication protein A4 involved_in ISO (PMID:19942684) UniProt PMID:19942684 NCBI chr  X:86,114,330...86,116,687 JBrowse link
G STK38 serine/threonine kinase 38 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 6:36,056,585...36,110,531
Ensembl chr 6:37,255,183...37,308,102 		JBrowse link
G TIPIN TIMELESS interacting protein acts_upstream_of_or_within ISO (PMID:17141802) MGI PMID:17141802 NCBI chr15:45,290,350...45,310,335
Ensembl chr15:63,566,463...63,585,717 		JBrowse link
G TIPRL TOR signaling pathway regulator involved_in IEA Ensembl GO_REF:0000107 NCBI chr 1:143,666,013...143,689,490
Ensembl chr 1:147,391,890...147,415,425 		JBrowse link
G TOPBP1 DNA topoisomerase II binding protein 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 3:130,667,998...130,729,569
Ensembl chr 3:138,143,893...138,203,363 		JBrowse link
G TP53BP1 tumor protein p53 binding protein 1 involved_in IEA TreeGrafter GO_REF:0000118 NCBI chr15:22,364,696...22,472,499
Ensembl chr15:40,519,012...40,626,741 		JBrowse link
G TREX1 three prime repair exonuclease 1 acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr 3:48,387,762...48,389,693
Ensembl chr 3:49,470,222...49,471,331 		JBrowse link
G UFL1 UFM1 specific ligase 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 6:94,356,440...94,389,920
Ensembl chr 6:98,242,756...98,274,377 		JBrowse link
G USP28 ubiquitin specific peptidase 28 involved_in IEA TreeGrafter GO_REF:0000118 NCBI chr11:108,676,566...108,754,372
Ensembl chr11:112,517,693...112,595,585 		JBrowse link
DNA damage response, signal transduction by p53 class mediator term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ACER2 alkaline ceramidase 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 9:19,216,891...19,262,477
Ensembl chr 9:19,709,402...19,750,896 		JBrowse link
G ATRX ATRX chromatin remodeler involved_in IEA Ensembl GO_REF:0000107 NCBI chr  X:66,682,968...66,969,421
Ensembl chr  X:76,795,574...77,083,486 		JBrowse link
G BATF basic leucine zipper ATF-like transcription factor involved_in IEA Ensembl GO_REF:0000107 NCBI chr14:56,075,768...56,100,749
Ensembl chr14:74,919,115...74,943,652 		JBrowse link
G BCL3 BCL3 transcription coactivator involved_in IEA Ensembl GO_REF:0000107 NCBI chr19:41,696,162...41,708,485
Ensembl chr19:50,304,171...50,313,005 		JBrowse link
G BRCA2 BRCA2 DNA repair associated acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr13:13,574,422...13,658,967
Ensembl chr13:32,010,066...32,091,332 		JBrowse link
G CASP2 caspase 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 7:135,283,072...135,307,855
Ensembl chr 7:147,773,749...147,792,958 		JBrowse link
G CDKN1A cyclin dependent kinase inhibitor 1A acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr 6:36,241,405...36,250,032
Ensembl chr 6:37,436,990...37,445,599 		JBrowse link
G CHEK2 checkpoint kinase 2 acts_upstream_of_or_within ISO (PMID:10710310) MGI PMID:10710310 NCBI chr22:9,757,038...9,811,171 JBrowse link
G CRADD CASP2 and RIPK1 domain containing adaptor with death domain involved_in ISO (PMID:21726810) UniProt PMID:21726810 NCBI chr12:91,220,813...91,593,799 JBrowse link
G E2F7 E2F transcription factor 7 involved_in IEA Ensembl GO_REF:0000107 NCBI chr12:74,540,049...74,582,561
Ensembl chr12:77,388,950...77,433,262 		JBrowse link
G FOXM1 forkhead box M1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr12:2,978,400...2,999,077
Ensembl chr12:2,910,028...2,930,503 		JBrowse link
G FOXO3 forkhead box O3 acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr 6:106,360,519...106,485,676
Ensembl chr 6:110,406,266...110,516,272 		JBrowse link
G HIPK2 homeodomain interacting protein kinase 2 involved_in ISO (PMID:14647468) BHF-UCL PMID:14647468 NCBI chr 7:131,506,711...131,722,943 JBrowse link
G KAT5 lysine acetyltransferase 5 involved_in IEA Ensembl GO_REF:0000107 NCBI chr11:61,071,118...61,078,667
Ensembl chr11:64,404,572...64,412,667 		JBrowse link
G MDM2 MDM2 proto-oncogene involved_in IEA Ensembl GO_REF:0000107 NCBI chr12:66,322,340...66,357,010
Ensembl chr12:69,102,084...69,133,278 		JBrowse link
G MDM4 MDM4 regulator of p53 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 1:180,117,364...180,151,144
Ensembl chr 1:184,406,124...184,439,344 		JBrowse link
G MIF macrophage migration inhibitory factor acts_upstream_of_or_within ISO (PMID:12878730) MGI PMID:12878730 NCBI chr22:4,646,986...4,647,831
Ensembl chr22:22,730,807...22,732,009 		JBrowse link
G MUC1 mucin 1, cell surface associated involved_in ISO (PMID:15710329) BHF-UCL PMID:15710329 NCBI chr 1:130,533,508...130,537,866
Ensembl chr 1:134,141,969...134,145,850 		JBrowse link
G MYO6 myosin VI involved_in IEA Ensembl GO_REF:0000107 NCBI chr 6:73,593,794...73,764,352
Ensembl chr 6:76,951,634...77,048,796 		JBrowse link
G NDRG1 N-myc downstream regulated 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 8:129,891,918...129,952,489
Ensembl chr 8:132,866,245...132,926,514 		JBrowse link
G NDUFS6 NADH:ubiquinone oxidoreductase subunit S6 acts_upstream_of_or_within ISO (PMID:33323934) MGI PMID:33323934 NCBI chr 5:2,132,177...2,147,226
Ensembl chr 5:1,854,644...1,869,711 		JBrowse link
G PAXIP1 PAX interacting protein 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 7:146,546,658...146,605,912
Ensembl chr 7:158,276,798...158,330,911 		JBrowse link
G PCBP4 poly(rC) binding protein 4 involved_in ISO (PMID:10891498) UniProt PMID:10891498 NCBI chr 3:51,898,857...51,908,932
Ensembl chr 3:53,127,448...53,137,293 		JBrowse link
G PIDD1 p53-induced death domain protein 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr11:816,629...827,295
Ensembl chr11:860,899...867,436 		JBrowse link
G PML PML nuclear body scaffold involved_in ISO (PMID:15626733) UniProt PMID:15626733 NCBI chr15:52,903,874...52,955,151
Ensembl chr15:71,658,884...71,710,883 		JBrowse link
G PPM1D protein phosphatase, Mg2+/Mn2+ dependent 1D acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr17:54,698,338...54,761,889
Ensembl chr17:59,824,566...59,887,015 		JBrowse link
G PPP2R5C protein phosphatase 2 regulatory subunit B'gamma involved_in ISO (PMID:17245430) UniProt PMID:17245430 NCBI chr14:82,383,086...82,549,822
Ensembl chr14:102,206,396...102,372,978 		JBrowse link
G PRAP1 proline rich acidic protein 1 involved_in IEA Ensembl GO_REF:0000107 Ensembl chr10:134,248,728...134,268,442 JBrowse link
G RBM38 RNA binding motif protein 38 involved_in ISO (PMID:17050675) UniProt PMID:17050675 NCBI chr20:53,731,641...53,749,688 JBrowse link
G RPL26 ribosomal protein L26 involved_in ISO (PMID:16213212) CAFA PMID:16213212 NCBI chr17:43,274,839...43,282,606
Ensembl chr17:48,009,198...48,015,977 		JBrowse link
G RPS27L ribosomal protein S27 like involved_in ISO (PMID:18056458) UniProt PMID:18056458 NCBI chr15:42,101,137...42,105,019
Ensembl chr15:60,397,131...60,400,643 		JBrowse link
G RPS6KA6 ribosomal protein S6 kinase A6 involved_in IEA Ensembl GO_REF:0000107 NCBI chr  X:73,131,457...73,261,906
Ensembl chr  X:83,243,957...83,373,194 		JBrowse link
G SESN2 sestrin 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 1:27,518,248...27,541,264
Ensembl chr 1:28,555,072...28,577,931 		JBrowse link
G SP100 SP100 nuclear antigen involved_in IEA Ensembl GO_REF:0000107 NCBI chr2B:117,673,152...117,799,911
Ensembl chr2B:236,496,446...236,601,096 		JBrowse link
G TFAP4 transcription factor AP-4 involved_in IEA Ensembl GO_REF:0000107 NCBI chr16:3,176,129...3,226,404
Ensembl chr16:4,348,929...4,368,525 		JBrowse link
G TP53 tumor protein p53 involved_in
acts_upstream_of_or_within		 IEA Ensembl GO_REF:0000107 NCBI chr17:7,699,449...7,717,812
Ensembl chr17:7,684,922...7,706,120 		JBrowse link
G TRIAP1 TP53 regulated inhibitor of apoptosis 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr12:118,025,599...118,028,045
Ensembl chr12:121,400,063...121,402,506 		JBrowse link
G USP10 ubiquitin specific peptidase 10 involved_in IEA Ensembl
TreeGrafter		 GO_REF:0000107 GO_REF:0000118 NCBI chr16:65,367,463...65,447,549
Ensembl chr16:84,712,913...84,787,714 		JBrowse link
DNA damage response, signal transduction resulting in transcription term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G MAD2L2 mitotic arrest deficient 2 like 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 1:10,436,532...10,454,023
Ensembl chr 1:11,654,963...11,661,526 		JBrowse link
DNA double-strand break processing term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ATM ATM serine/threonine kinase involved_in IEA Ensembl GO_REF:0000107 NCBI chr11:103,109,979...103,256,405
Ensembl chr11:106,584,228...106,727,041 		JBrowse link
G BLM BLM RecQ like helicase involved_in IEA Ensembl GO_REF:0000107 NCBI chr15:69,407,248...69,508,070
Ensembl chr15:88,607,157...88,707,864 		JBrowse link
G EXD2 exonuclease 3'-5' domain containing 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chr14:49,783,072...49,835,645
Ensembl chr14:68,656,669...68,707,834 		JBrowse link
G LOC100986203 histone-lysine N-methyltransferase SETMAR involved_in IEA Ensembl
TreeGrafter		 GO_REF:0000107 GO_REF:0000118 NCBI chr 3:4,256,539...4,271,593
Ensembl chr 3:4,357,890...4,371,791 		JBrowse link
G MRE11 MRE11 homolog, double strand break repair nuclease involved_in IEA Ensembl GO_REF:0000107 NCBI chr11:89,418,537...89,500,705
Ensembl chr11:92,918,549...92,985,966 		JBrowse link
G NBN nibrin involved_in IEA Ensembl GO_REF:0000107 NCBI chr 8:86,622,797...86,674,202
Ensembl chr 8:88,575,198...88,626,307 		JBrowse link
G RAD50 RAD50 double strand break repair protein involved_in IEA Ensembl GO_REF:0000107 NCBI chr 5:127,972,630...128,059,911
Ensembl chr 5:134,134,495...134,222,261 		JBrowse link
G SLC25A16 solute carrier family 25 member 16 involved_in IEA Ensembl GO_REF:0000107 NCBI chr10:64,898,024...64,956,541
Ensembl chr10:67,506,006...67,549,308
Ensembl chr10:67,506,006...67,549,308 		JBrowse link
G SMARCAD1 SNF2 related chromatin remodeling ATPase with DExD box 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 4:86,567,722...86,651,527
Ensembl chr 4:97,240,614...97,324,366 		JBrowse link
G UBE2N ubiquitin conjugating enzyme E2 N acts_upstream_of ISO (PMID:17349954) HGNC-UCL PMID:17349954 NCBI chr12:90,951,446...90,984,075 JBrowse link
G UBE2V2 ubiquitin conjugating enzyme E2 V2 involved_in ISO (PMID:17349954) HGNC-UCL PMID:17349954 NCBI chr 8:44,435,496...44,488,517
Ensembl chr 8:41,856,429...41,878,320 		JBrowse link
DNA double-strand break processing involved in repair via single-strand annealing term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G HELQ helicase, POLQ like involved_in IEA Ensembl GO_REF:0000107 NCBI chr 4:40,740,392...40,788,907
Ensembl chr 4:46,586,882...46,635,108 		JBrowse link
G RAD52 RAD52 homolog, DNA repair protein acts_upstream_of_or_within
involved_in		 IEA
ISO		 (PMID:22912580) Ensembl
CACAO		 PMID:22912580 GO_REF:0000107 NCBI chr12:986,372...1,066,708
Ensembl chr12:946,825...985,668 		JBrowse link
G RBBP8 RB binding protein 8, endonuclease involved_in IEA Ensembl
TreeGrafter		 GO_REF:0000107 GO_REF:0000118 NCBI chr18:16,181,652...16,274,597
Ensembl chr18:19,811,989...19,903,522 		JBrowse link
G RNF138 ring finger protein 138 involved_in IEA TreeGrafter GO_REF:0000118 NCBI chr18:25,300,480...25,340,010 JBrowse link
G RNF138 ring finger protein 138 involved_in IEA TreeGrafter GO_REF:0000118 Ensembl chr18:28,897,138...28,932,652 JBrowse link
G SLX1A SLX1 homolog A, structure-specific endonuclease subunit involved_in ISO (PMID:19595721) UniProt PMID:19595721
G SLX4 SLX4 structure-specific endonuclease subunit involved_in IEA Ensembl GO_REF:0000107 NCBI chr16:2,502,334...2,532,172
Ensembl chr16:3,678,018...3,707,842 		JBrowse link
DNA recombinase assembly term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G DMC1 DNA meiotic recombinase 1 involved_in IEA TreeGrafter GO_REF:0000118 NCBI chr22:19,433,989...19,485,804
Ensembl chr22:37,253,609...37,305,769 		JBrowse link
G RAD51 RAD51 recombinase involved_in IEA Ensembl
TreeGrafter		 GO_REF:0000107 GO_REF:0000118 NCBI chr15:19,638,310...19,672,474
Ensembl chr15:37,891,056...37,925,207 		JBrowse link
G RAD52 RAD52 homolog, DNA repair protein involved_in IEA InterPro GO_REF:0000002 NCBI chr12:986,372...1,066,708
Ensembl chr12:946,825...985,668 		JBrowse link
DNA repair term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ABRAXAS1 abraxas 1, BRCA1 A complex subunit involved_in IEA UniProt GO_REF:0000043 NCBI chr 4:40,711,139...40,736,763
Ensembl chr 4:46,556,892...46,581,573 		JBrowse link
G ADPRS ADP-ribosylserine hydrolase involved_in IEA Ensembl GO_REF:0000107 NCBI chr 1:35,354,721...35,360,029
Ensembl chr 1:36,529,051...36,534,235 		JBrowse link
G ALKBH1 alkB homolog 1, histone H2A dioxygenase involved_in IEA UniProt
Ensembl		 GO_REF:0000043 GO_REF:0000107 NCBI chr14:58,227,094...58,262,107
Ensembl chr14:77,428,033...77,462,905 		JBrowse link
G ALKBH2 alkB homolog 2, alpha-ketoglutarate dependent dioxygenase involved_in IEA InterPro GO_REF:0000002 NCBI chr12:106,664,678...106,670,558
Ensembl chr12:110,058,507...110,063,946 		JBrowse link
G ALKBH3 alkB homolog 3, alpha-ketoglutarate dependent dioxygenase involved_in IEA TreeGrafter
InterPro		 GO_REF:0000002 GO_REF:0000118 NCBI chr11:43,841,083...43,880,608
Ensembl chr11:44,336,655...44,376,057 		JBrowse link
G ANKLE1 ankyrin repeat and LEM domain containing 1 NOT|involved_in ISO (PMID:27010503) UniProt PMID:27010503 NCBI chr19:16,769,670...16,775,114
Ensembl chr19:17,744,570...17,750,070 		JBrowse link
G APEX1 apurinic/apyrimidinic endodeoxyribonuclease 1 involved_in IEA
ISS		 InterPro
Ensembl
UniProt		 GO_REF:0000002 GO_REF:0000024 GO_REF:0000043 GO_REF:0000107 NCBI chr14:1,329,745...1,332,315
Ensembl chr14:19,381,911...19,384,542 		JBrowse link
G APEX2 apurinic/apyrimidinic endodeoxyribonuclease 2 involved_in IEA InterPro
UniProt		 GO_REF:0000002 GO_REF:0000043 NCBI chr  X:47,210,552...47,218,320
Ensembl chr  X:55,442,599...55,450,402 		JBrowse link
G APLF aprataxin and PNKP like factor involved_in IEA Ensembl
UniProt		 GO_REF:0000043 GO_REF:0000107 NCBI chr2A:68,509,314...68,629,192
Ensembl chr2A:69,632,459...69,744,611 		JBrowse link
G APTX aprataxin involved_in IEA UniProt GO_REF:0000043 NCBI chr 9:32,747,409...32,819,270
Ensembl chr 9:33,556,419...33,585,060 		JBrowse link
G ASF1A anti-silencing function 1A histone chaperone acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr 6:116,702,314...116,717,445
Ensembl chr 6:120,843,461...120,858,471 		JBrowse link
G ATM ATM serine/threonine kinase involved_in
acts_upstream_of_or_within		 IEA InterPro
Ensembl		 GO_REF:0000002 GO_REF:0000107 NCBI chr11:103,109,979...103,256,405
Ensembl chr11:106,584,228...106,727,041 		JBrowse link
G ATR ATR serine/threonine kinase involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:15364958) UniProt
TreeGrafter
MGI		 PMID:15364958 GO_REF:0000043 GO_REF:0000118 NCBI chr 3:139,482,606...139,612,274
Ensembl chr 3:147,075,185...147,196,261 		JBrowse link
G ATRIP ATR interacting protein involved_in IEA TreeGrafter GO_REF:0000118 NCBI chr 3:48,368,775...48,387,698
Ensembl chr 3:49,450,991...49,469,351 		JBrowse link
G ATRX ATRX chromatin remodeler involved_in IEA UniProt GO_REF:0000043 NCBI chr  X:66,682,968...66,969,421
Ensembl chr  X:76,795,574...77,083,486 		JBrowse link
G BABAM1 BRISC and BRCA1 A complex member 1 involved_in IEA UniProt GO_REF:0000043 NCBI chr19:16,755,518...16,767,634
Ensembl chr19:17,729,568...17,742,447 		JBrowse link
G BABAM2 BRISC and BRCA1 A complex member 2 involved_in IEA UniProt GO_REF:0000043 NCBI chr2A:27,884,907...28,338,302
Ensembl chr2A:27,974,917...28,420,519 		JBrowse link
G BACH1 BTB domain and CNC homolog 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr21:15,738,343...16,036,760
Ensembl chr21:29,126,107...29,173,835 		JBrowse link
G BCCIP BRCA2 and CDKN1A interacting protein involved_in IEA UniProt GO_REF:0000043 NCBI chr10:122,384,665...122,414,636
Ensembl chr10:126,648,677...126,678,863 		JBrowse link
G BIVM basic, immunoglobulin-like variable motif containing involved_in IEA UniProt GO_REF:0000043 GO_REF:0000117 NCBI chr13:83,959,365...84,002,223
Ensembl chr13:103,096,344...103,174,182 		JBrowse link
G BLM BLM RecQ like helicase involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:15364958) InterPro
TreeGrafter
MGI
UniProt		 PMID:15364958 GO_REF:0000002 GO_REF:0000117 GO_REF:0000118 NCBI chr15:69,407,248...69,508,070
Ensembl chr15:88,607,157...88,707,864 		JBrowse link
G BRCA1 BRCA1 DNA repair associated involved_in IEA InterPro
UniProt		 GO_REF:0000002 GO_REF:0000043 NCBI chr17:14,197,946...14,279,064
Ensembl chr17:14,428,526...14,506,815 		JBrowse link
G BRCA2 BRCA2 DNA repair associated involved_in IEA UniProt
InterPro		 GO_REF:0000002 GO_REF:0000043 NCBI chr13:13,574,422...13,658,967
Ensembl chr13:32,010,066...32,091,332 		JBrowse link
G BRCC3 BRCA1/BRCA2-containing complex subunit 3 involved_in IEA InterPro GO_REF:0000002 NCBI chr  X:144,550,320...144,592,795
Ensembl chr  X:154,389,283...154,428,669 		JBrowse link
G CDK2 cyclin dependent kinase 2 involved_in IEA UniProt GO_REF:0000043 NCBI chr12:32,940,225...32,946,236
Ensembl chr12:33,189,934...33,195,945 		JBrowse link
G CENPS centromere protein S involved_in IEA UniProt GO_REF:0000043 NCBI chr 1:9,190,303...9,211,812 JBrowse link
G CENPX centromere protein X involved_in IEA UniProt
InterPro		 GO_REF:0000002 GO_REF:0000043 NCBI chr17:76,423,317...76,427,577
Ensembl chr17:82,128,636...82,132,831 		JBrowse link
G CHAF1A chromatin assembly factor 1 subunit A involved_in IEA UniProt GO_REF:0000043 NCBI chr19:3,425,182...3,461,646
Ensembl chr19:4,375,379...4,409,339 		JBrowse link
G CHD1L chromodomain helicase DNA binding protein 1 like involved_in IEA InterPro GO_REF:0000002 NCBI chr 1:122,595,246...122,720,788
Ensembl chr 1:112,809,274...112,862,219 		JBrowse link
G CHEK1 checkpoint kinase 1 involved_in
acts_upstream_of_or_within		 IEA Ensembl GO_REF:0000107 NCBI chr11:120,446,352...120,478,207
Ensembl chr11:124,359,218...124,390,981 		JBrowse link
G CHRNA4 cholinergic receptor nicotinic alpha 4 subunit involved_in IEA Ensembl GO_REF:0000107 NCBI chr20:59,730,759...59,748,678
Ensembl chr20:61,270,631...61,283,005 		JBrowse link
G DCLRE1A DNA cross-link repair 1A involved_in IEA UniProt
InterPro		 GO_REF:0000002 GO_REF:0000043 NCBI chr10:110,433,735...110,453,565
Ensembl chr10:113,866,759...113,886,141 		JBrowse link
G DCLRE1B DNA cross-link repair 1B involved_in IEA UniProt GO_REF:0000043 NCBI chr 1:88,643,664...88,651,962
Ensembl chr 1:123,692,915...123,701,403 		JBrowse link
G DCLRE1C DNA cross-link repair 1C involved_in IEA UniProt GO_REF:0000043 NCBI chr10:14,901,335...14,956,947
Ensembl chr10:15,236,558...15,269,043 		JBrowse link
G DDB2 damage specific DNA binding protein 2 involved_in IEA InterPro
TreeGrafter
UniProt		 GO_REF:0000002 GO_REF:0000043 GO_REF:0000118 NCBI chr11:47,161,345...47,185,526
Ensembl chr11:47,714,723...47,738,761 		JBrowse link
G DMAP1 DNA methyltransferase 1 associated protein 1 involved_in IEA InterPro GO_REF:0000002 NCBI chr 1:43,516,839...43,524,206
Ensembl chr 1:44,886,307...44,893,598 		JBrowse link
G DMC1 DNA meiotic recombinase 1 involved_in IEA InterPro GO_REF:0000002 NCBI chr22:19,433,989...19,485,804
Ensembl chr22:37,253,609...37,305,769 		JBrowse link
G DNTT DNA nucleotidylexotransferase involved_in IEA InterPro GO_REF:0000002 NCBI chr10:92,916,783...92,958,216
Ensembl chr10:96,423,819...96,457,742 		JBrowse link
G DOT1L DOT1 like histone lysine methyltransferase involved_in IEA UniProt
TreeGrafter		 GO_REF:0000104 GO_REF:0000118 NCBI chr19:1,173,915...1,243,633
Ensembl chr19:2,147,031...2,210,039 		JBrowse link
G EEPD1 endonuclease/exonuclease/phosphatase family domain containing 1 involved_in IEA InterPro GO_REF:0000002 NCBI chr 7:36,780,705...36,923,248
Ensembl chr 7:37,012,129...37,153,307 		JBrowse link
G EME1 essential meiotic structure-specific endonuclease 1 involved_in IEA UniProt
InterPro		 GO_REF:0000002 GO_REF:0000043 NCBI chr17:44,467,537...44,475,883
Ensembl chr17:49,341,791...49,349,959 		JBrowse link
G EME2 essential meiotic structure-specific endonuclease subunit 2 involved_in IEA InterPro
UniProt		 GO_REF:0000002 GO_REF:0000043 NCBI chr16:395,571...403,233
Ensembl chr16:1,825,622...1,829,557 		JBrowse link
G ENDOV endonuclease V involved_in IEA InterPro GO_REF:0000002 NCBI chr17:74,843,661...74,865,960
Ensembl chr17:80,576,450...80,591,856 		JBrowse link
G ERCC1 ERCC excision repair 1, endonuclease non-catalytic subunit involved_in
acts_upstream_of_or_within		 IEA InterPro
Ensembl
UniProt		 GO_REF:0000002 GO_REF:0000043 GO_REF:0000107 NCBI chr19:42,356,039...42,427,754
Ensembl chr19:50,951,674...50,968,430 		JBrowse link
G ERCC2 ERCC excision repair 2, TFIIH core complex helicase subunit involved_in
acts_upstream_of_or_within		 IEA UniProt
Ensembl		 GO_REF:0000043 GO_REF:0000107 NCBI chr19:42,298,927...42,319,816
Ensembl chr19:50,897,004...50,915,819 		JBrowse link
G ERCC3 ERCC excision repair 3, TFIIH core complex helicase subunit involved_in IEA Ensembl
UniProt		 GO_REF:0000043 GO_REF:0000107 NCBI chr2B:32,983,492...33,020,492
Ensembl chr2B:127,922,483...127,959,372 		JBrowse link
G ERCC4 ERCC excision repair 4, endonuclease catalytic subunit involved_in
acts_upstream_of_or_within		 IEA InterPro
Ensembl
UniProt		 GO_REF:0000002 GO_REF:0000043 GO_REF:0000107 GO_REF:0000117 NCBI chr16:12,848,334...12,880,480
Ensembl chr16:14,272,417...14,304,496 		JBrowse link
G ERCC5 ERCC excision repair 5, endonuclease involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:15082767) UniProt
MGI		 PMID:15082767 GO_REF:0000043 GO_REF:0000117 NCBI chr13:84,005,950...84,036,710
Ensembl chr13:103,096,344...103,174,182 		JBrowse link
G ERCC6 ERCC excision repair 6, chromatin remodeling factor acts_upstream_of_or_within
involved_in		 IEA
ISO		 (PMID:26218421) Ensembl
UniProt		 PMID:26218421 GO_REF:0000107 NCBI chr10:44,703,720...44,784,948 JBrowse link
G ERCC8 ERCC excision repair 8, CSA ubiquitin ligase complex subunit involved_in IEA UniProt GO_REF:0000043 NCBI chr 5:53,053,712...53,131,563
Ensembl chr 5:54,693,987...54,765,496 		JBrowse link
G EXO1 exonuclease 1 involved_in IEA UniProt GO_REF:0000043 GO_REF:0000104 NCBI chr 1:217,410,175...217,451,982
Ensembl chr 1:222,389,684...222,431,556 		JBrowse link
G EYA1 EYA transcriptional coactivator and phosphatase 1 involved_in IEA UniProt GO_REF:0000043 NCBI chr 8:67,728,057...68,060,069
Ensembl chr 8:69,387,769...69,551,829 		JBrowse link
G EYA2 EYA transcriptional coactivator and phosphatase 2 involved_in IEA UniProt GO_REF:0000043 NCBI chr20:43,226,621...43,520,301
Ensembl chr20:44,310,451...44,607,468 		JBrowse link
G EYA3 EYA transcriptional coactivator and phosphatase 3 involved_in IEA UniProt GO_REF:0000043 NCBI chr 1:27,230,623...27,349,355
Ensembl chr 1:28,270,116...28,386,878 		JBrowse link
G EYA4 EYA transcriptional coactivator and phosphatase 4 involved_in IEA UniProt GO_REF:0000043 NCBI chr 6:131,016,143...131,306,251
Ensembl chr 6:135,116,978...135,404,403 		JBrowse link
G FAAP24 FA core complex associated protein 24 involved_in IEA UniProt GO_REF:0000043 NCBI chr19:29,895,258...29,900,531
Ensembl chr19:38,639,167...38,644,143 		JBrowse link
G FAN1 FANCD2 and FANCI associated nuclease 1 involved_in IEA UniProt
InterPro
Ensembl		 GO_REF:0000002 GO_REF:0000043 GO_REF:0000107 NCBI chr15:9,395,348...9,435,434
Ensembl chr15:28,433,749...28,473,211 		JBrowse link
G FANCC FA complementation group C involved_in IEA UniProt GO_REF:0000043 NCBI chr 9:66,201,581...66,418,229
Ensembl chr 9:94,329,971...94,477,198 		JBrowse link
G FANCD2 FA complementation group D2 involved_in IEA InterPro GO_REF:0000002 NCBI chr 3:9,932,292...10,037,332
Ensembl chr 3:10,312,476...10,389,190 		JBrowse link
G FANCI FA complementation group I involved_in IEA InterPro GO_REF:0000002 NCBI chr15:67,935,882...68,009,033
Ensembl chr15:87,142,871...87,215,271 		JBrowse link
G FANCL FA complementation group L involved_in IEA Ensembl
TreeGrafter		 GO_REF:0000107 GO_REF:0000118 NCBI chr2A:58,270,620...58,353,001
Ensembl chr2A:59,418,265...59,499,496 		JBrowse link
G FANCM FA complementation group M involved_in IEA UniProt
InterPro		 GO_REF:0000002 GO_REF:0000117 NCBI chr14:25,752,295...25,817,001
Ensembl chr14:44,080,146...44,143,958 		JBrowse link
G FBH1 F-box DNA helicase 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr10:5,931,389...5,978,844
Ensembl chr10:5,915,713...5,962,778 		JBrowse link
G FEN1 flap structure-specific endonuclease 1 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:12861020) UniProt
MGI		 PMID:12861020 GO_REF:0000043 NCBI chr11:57,092,270...57,096,828
Ensembl chr11:60,455,474...60,456,616 		JBrowse link
G FMR1 fragile X messenger ribonucleoprotein 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr  X:136,937,889...136,976,828
Ensembl chr  X:147,365,748...147,405,321 		JBrowse link
G GTF2H3 general transcription factor IIH subunit 3 involved_in IEA UniProt GO_REF:0000043 NCBI chr12:121,218,813...121,246,807
Ensembl chr12:125,445,381...125,473,763 		JBrowse link
G GTF2H4 general transcription factor IIH subunit 4 involved_in IEA UniProt GO_REF:0000043 NCBI chr 6:30,653,398...30,659,316
Ensembl chr 6:31,521,501...31,527,456 		JBrowse link
G GTF2H5 general transcription factor IIH subunit 5 involved_in IEA UniProt GO_REF:0000043 Ensembl chr 6:158,126,665...158,153,663 JBrowse link
G HDAC9 histone deacetylase 9 acts_upstream_of_or_within ISO (PMID:21746928) MGI PMID:21746928 NCBI chr 7:18,740,580...19,653,615
Ensembl chr 7:18,138,761...18,970,717 		JBrowse link
G HDGFL2 HDGF like 2 involved_in IEA UniProt GO_REF:0000043 NCBI chr19:3,489,986...3,521,935
Ensembl chr19:4,440,491...4,471,212 		JBrowse link
G HINFP histone H4 transcription factor involved_in IEA Ensembl GO_REF:0000107 NCBI chr11:113,959,670...113,973,781
Ensembl chr11:117,888,855...117,902,184 		JBrowse link
G HLTF helicase like transcription factor involved_in IEA TreeGrafter GO_REF:0000118 NCBI chr 3:146,054,371...146,111,150
Ensembl chr 3:153,632,319...153,688,951 		JBrowse link
G HMGB1 high mobility group box 1 involved_in IEA UniProt GO_REF:0000043 NCBI chr13:11,737,942...11,894,923
Ensembl chr13:30,174,899...30,179,527 		JBrowse link
G HSPA1A heat shock protein family A (Hsp70) member 1A acts_upstream_of_or_within ISO (PMID:14701760) MGI PMID:14701760 NCBI chr 6:31,476,710...31,491,411 JBrowse link
G HUWE1 HECT, UBA and WWE domain containing E3 ubiquitin protein ligase 1 involved_in IEA UniProt GO_REF:0000043 NCBI chr  X:45,746,228...45,897,250
Ensembl chr  X:53,855,404...54,005,366 		JBrowse link
G INIP INTS3 and NABP interacting protein involved_in IEA InterPro
TreeGrafter
UniProt
Ensembl		 GO_REF:0000002 GO_REF:0000043 GO_REF:0000104 GO_REF:0000107 GO_REF:0000118 NCBI chr 9:83,811,378...83,845,638
Ensembl chr 9:111,965,947...111,999,561 		JBrowse link
G INO80 INO80 complex ATPase subunit involved_in IEA UniProt
TreeGrafter
InterPro		 GO_REF:0000002 GO_REF:0000043 GO_REF:0000104 GO_REF:0000118 NCBI chr15:19,920,980...20,058,117
Ensembl chr15:38,170,982...38,307,311 		JBrowse link
G INTS3 integrator complex subunit 3 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 1:129,084,681...129,130,669
Ensembl chr 1:132,714,200...132,759,842 		JBrowse link
G KAT5 lysine acetyltransferase 5 involved_in IEA UniProt GO_REF:0000043 NCBI chr11:61,071,118...61,078,667
Ensembl chr11:64,404,572...64,412,667 		JBrowse link
G KIF22 kinesin family member 22 involved_in IEA InterPro GO_REF:0000002 Ensembl chr16:30,161,702...30,177,170 JBrowse link
G KMT5B lysine methyltransferase 5B involved_in IEA Ensembl GO_REF:0000107 NCBI chr11:63,239,796...63,297,113
Ensembl chr11:66,549,230...66,581,475 		JBrowse link
G KMT5C lysine methyltransferase 5C involved_in IEA Ensembl GO_REF:0000107 NCBI chr19:52,381,963...52,390,507
Ensembl chr19:61,073,396...61,078,717 		JBrowse link
G LIG1 DNA ligase 1 NOT|acts_upstream_of_or_within
involved_in		 ISO
IEA		 (PMID:11896201)
(PMID:21390131)		 RGD
MGI
UniProt
InterPro		 PMID:1730240 PMID:11896201 PMID:21390131 GO_REF:0000002 GO_REF:0000043 GO_REF:0000117 RGD:724410 NCBI chr19:45,056,737...45,110,867
Ensembl chr19:53,706,778...53,761,088 		JBrowse link
G LIG3 DNA ligase 3 involved_in IEA UniProt
InterPro		 GO_REF:0000002 GO_REF:0000043 GO_REF:0000117 NCBI chr17:21,776,483...21,805,706
Ensembl chr17:22,074,046...22,095,220 		JBrowse link
G LIG4 DNA ligase 4 involved_in
acts_upstream_of_or_within		 IEA UniProt
Ensembl
InterPro		 GO_REF:0000002 GO_REF:0000043 GO_REF:0000107 GO_REF:0000117 NCBI chr13:89,336,434...89,347,418
Ensembl chr13:108,475,820...108,478,555 		JBrowse link
G LOC100970335 X-ray repair cross-complementing protein 6-like involved_in IEA UniProt GO_REF:0000043 NCBI chr  X:139,876,341...139,878,314 JBrowse link
G LOC100971447 E1A-binding protein p400 involved_in IEA TreeGrafter GO_REF:0000118 NCBI chr12:129,606,823...129,737,179
Ensembl chr12:134,045,829...134,163,185 		JBrowse link
G LOC100974858 core histone macro-H2A.1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 5:130,727,065...130,791,932
Ensembl chr 5:136,868,521...136,933,834 		JBrowse link
G LOC100987487 general transcription factor IIH subunit 2 involved_in IEA UniProt
InterPro		 GO_REF:0000002 GO_REF:0000043 NCBI chr 5:44,412,653...44,445,158 JBrowse link
G LOC100989432 G/T mismatch-specific thymine DNA glycosylase-like involved_in IEA UniProt GO_REF:0000043 NCBI chr12:60,514,718...60,516,287 JBrowse link
G LOC100991754 histone PARylation factor 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 4:161,949,343...161,977,887
Ensembl chr 4:174,021,060...174,049,213 		JBrowse link
G LOC100994157 histone H2AX acts_upstream_of_or_within ISO (PMID:11934988)
(PMID:15364958)		 MGI PMID:11934988 PMID:15364958 NCBI chr11:113,932,078...113,933,679 JBrowse link
G LOC103785403 putative EP400-like protein involved_in IEA TreeGrafter GO_REF:0000118 NCBI chr12:129,742,208...129,785,719 JBrowse link
G MBD4 methyl-CpG binding domain 4, DNA glycosylase involved_in IEA InterPro
UniProt		 GO_REF:0000002 GO_REF:0000043 NCBI chr 3:126,489,125...126,498,034
Ensembl chr 3:133,839,643...133,851,450 		JBrowse link
G MCM9 minichromosome maintenance 9 homologous recombination repair factor involved_in IEA UniProt GO_REF:0000043 NCBI chr 6:116,620,188...116,743,435
Ensembl chr 6:120,763,329...120,881,865 		JBrowse link
G MDC1 mediator of DNA damage checkpoint 1 involved_in IEA UniProt GO_REF:0000043 NCBI chr 6:30,444,570...30,462,432
Ensembl chr 6:31,314,560...31,329,243 		JBrowse link
G MGME1 mitochondrial genome maintenance exonuclease 1 involved_in IEA UniProt GO_REF:0000117 NCBI chr20:17,928,751...17,950,907
Ensembl chr20:17,907,241...17,929,214 		JBrowse link
G MGMT O-6-methylguanine-DNA methyltransferase involved_in
acts_upstream_of_or_within		 IEA InterPro
Ensembl
TreeGrafter
UniProt		 GO_REF:0000002 GO_REF:0000043 GO_REF:0000107 GO_REF:0000118 NCBI chr10:126,059,701...126,365,850
Ensembl chr10:130,305,485...130,609,422 		JBrowse link
G MLH1 mutL homolog 1 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:13679151)
(PMID:15480418)		 UniProt
MGI		 PMID:13679151 PMID:15480418 GO_REF:0000043 NCBI chr 3:36,899,828...36,957,076
Ensembl chr 3:37,189,439...37,245,801 		JBrowse link
G MMS19 MMS19 homolog, cytosolic iron-sulfur assembly component involved_in IEA UniProt GO_REF:0000043 GO_REF:0000104 NCBI chr10:94,080,690...94,120,811
Ensembl chr10:97,574,257...97,614,146 		JBrowse link
G MMS22L MMS22 like, DNA repair protein involved_in IEA UniProt GO_REF:0000043 NCBI chr 6:94,989,906...95,127,260
Ensembl chr 6:98,861,299...99,011,773 		JBrowse link
G MNAT1 MNAT1 component of CDK activating kinase involved_in IEA TreeGrafter GO_REF:0000118 NCBI chr14:41,342,530...41,576,690
Ensembl chr14:59,603,209...59,835,408 		JBrowse link
G MPG N-methylpurine DNA glycosylase involved_in IEA UniProt GO_REF:0000043 Ensembl chr16:70,655...76,763 JBrowse link
G MRE11 MRE11 homolog, double strand break repair nuclease involved_in IEA UniProt GO_REF:0000043 NCBI chr11:89,418,537...89,500,705
Ensembl chr11:92,918,549...92,985,966 		JBrowse link
G MSH2 mutS homolog 2 involved_in
acts_upstream_of_or_within		 IEA UniProt
Ensembl		 GO_REF:0000043 GO_REF:0000107 NCBI chr2A:47,524,468...47,602,376
Ensembl chr2A:48,447,207...48,554,461 		JBrowse link
G MSH3 mutS homolog 3 involved_in IEA Ensembl
UniProt		 GO_REF:0000043 GO_REF:0000107 NCBI chr 5:34,408,469...34,663,483
Ensembl chr 5:34,719,322...34,938,469 		JBrowse link
G MSH6 mutS homolog 6 involved_in IEA Ensembl
UniProt		 GO_REF:0000043 GO_REF:0000107 NCBI chr2A:47,901,591...47,926,662
Ensembl chr2A:48,824,350...48,849,779 		JBrowse link
G MUS81 MUS81 structure-specific endonuclease subunit involved_in IEA UniProt
Ensembl		 GO_REF:0000043 GO_REF:0000107 GO_REF:0000117 NCBI chr11:61,220,699...61,226,747
Ensembl chr11:64,549,840...64,555,875 		JBrowse link
G MUTYH mutY DNA glycosylase involved_in IEA UniProt
InterPro		 GO_REF:0000002 GO_REF:0000043 NCBI chr 1:44,632,102...44,643,292
Ensembl chr 1:45,990,588...46,002,645 		JBrowse link
G NABP1 nucleic acid binding protein 1 involved_in IEA Ensembl
UniProt		 GO_REF:0000043 GO_REF:0000107 NCBI chr2B:78,980,156...78,989,309
Ensembl chr2B:196,895,166...196,903,977 		JBrowse link
G NABP2 nucleic acid binding protein 2 involved_in IEA UniProt
Ensembl		 GO_REF:0000043 GO_REF:0000107 NCBI chr12:32,685,521...32,693,318
Ensembl chr12:32,937,017...32,944,754 		JBrowse link
G NBN nibrin involved_in IEA UniProt
InterPro		 GO_REF:0000002 GO_REF:0000043 NCBI chr 8:86,622,797...86,674,202
Ensembl chr 8:88,575,198...88,626,307 		JBrowse link
G NEIL1 nei like DNA glycosylase 1 involved_in
acts_upstream_of_or_within		 IEA UniProt
Ensembl		 GO_REF:0000043 GO_REF:0000107 GO_REF:0000117 NCBI chr15:54,263,424...54,271,601
Ensembl chr15:73,858,910...73,867,474 		JBrowse link
G NEIL2 nei like DNA glycosylase 2 involved_in IEA UniProt GO_REF:0000043 NCBI chr 8:7,415,540...7,433,270 JBrowse link
G NEIL3 nei like DNA glycosylase 3 involved_in IEA UniProt
InterPro		 GO_REF:0000002 GO_REF:0000043 GO_REF:0000117 NCBI chr 4:169,503,942...169,556,654
Ensembl chr 4:181,738,803...181,795,082 		JBrowse link
G NHEJ1 non-homologous end joining factor 1 involved_in IEA UniProt GO_REF:0000043 NCBI chr2B:106,326,596...106,419,928
Ensembl chr2B:224,926,183...225,008,788 		JBrowse link
G NME3 NME/NM23 nucleoside diphosphate kinase 3 involved_in IEA Ensembl GO_REF:0000107 NCBI chr16:392,694...394,106
Ensembl chr16:1,822,719...1,824,147 		JBrowse link
G NOP53 NOP53 ribosome biogenesis factor involved_in ISO (PMID:21741933) UniProt PMID:21741933 NCBI chr19:44,739,739...44,751,303 JBrowse link
G NPM1 nucleophosmin 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 5:166,735,904...166,756,321
Ensembl chr 5:173,490,197...173,510,656 		JBrowse link
G NSMCE1 NSE1 homolog, SMC5-SMC6 complex component involved_in IEA UniProt
InterPro		 GO_REF:0000002 GO_REF:0000043 GO_REF:0000104 Ensembl chr16:27,598,382...27,642,488 JBrowse link
G NSMCE3 NSE3 homolog, SMC5-SMC6 complex component involved_in IEA Ensembl GO_REF:0000107 NCBI chr15:550,856...552,543
Ensembl chr15:27,027,373...27,028,285 		JBrowse link
G NTHL1 nth like DNA glycosylase 1 involved_in IEA UniProt
InterPro		 GO_REF:0000002 GO_REF:0000043 GO_REF:0000117 NCBI chr16:655,433...663,521
Ensembl chr16:2,127,858...2,135,656 		JBrowse link
G OGG1 8-oxoguanine DNA glycosylase involved_in
acts_upstream_of_or_within		 IEA UniProt
InterPro
Ensembl		 GO_REF:0000002 GO_REF:0000043 GO_REF:0000107 GO_REF:0000117 NCBI chr 3:9,702,311...9,742,283
Ensembl chr 3:9,940,955...9,947,335 		JBrowse link
G PARK7 Parkinsonism associated deglycase involved_in IEA Ensembl GO_REF:0000107 NCBI chr 1:6,722,260...6,745,915
Ensembl chr 1:7,969,280...7,993,271 		JBrowse link
G PARP1 poly(ADP-ribose) polymerase 1 involved_in IEA UniProt
Ensembl		 GO_REF:0000043 GO_REF:0000107 NCBI chr 1:201,820,355...201,867,673
Ensembl chr 1:206,812,981...206,860,356 		JBrowse link
G PARP2 poly(ADP-ribose) polymerase 2 involved_in IEA UniProt
Ensembl		 GO_REF:0000043 GO_REF:0000107 NCBI chr14:1,215,727...1,230,006
Ensembl chr14:19,269,046...19,282,853 		JBrowse link
G PARP3 poly(ADP-ribose) polymerase family member 3 involved_in IEA UniProt GO_REF:0000043 NCBI chr 3:51,883,695...51,890,266
Ensembl chr 3:53,112,494...53,119,053 		JBrowse link
G PARPBP PARP1 binding protein involved_in IEA UniProt GO_REF:0000043 NCBI chr12:99,707,641...99,784,993
Ensembl chr12:103,105,117...103,182,366 		JBrowse link
G PCLAF PCNA clamp associated factor involved_in IEA UniProt GO_REF:0000043 NCBI chr15:43,311,115...43,331,979
Ensembl chr15:61,602,830...61,617,303 		JBrowse link
G PDS5A PDS5 cohesin associated factor A involved_in IEA TreeGrafter GO_REF:0000118 NCBI chr 4:34,149,622...34,303,065
Ensembl chr 4:40,002,869...40,156,698 		JBrowse link
G PDS5B PDS5 cohesin associated factor B involved_in IEA TreeGrafter GO_REF:0000118 NCBI chr13:13,843,910...14,033,043
Ensembl chr13:32,337,765...32,462,333 		JBrowse link
G PIF1 PIF1 5'-to-3' DNA helicase involved_in IEA UniProt
InterPro		 GO_REF:0000002 GO_REF:0000043 GO_REF:0000104 NCBI chr15:43,756,605...43,766,631
Ensembl chr15:62,041,461...62,052,311 		JBrowse link
G PMS2 PMS1 homolog 2, mismatch repair system component acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr 7:7,433,031...7,459,560
Ensembl chr 7:6,167,403...6,202,984 		JBrowse link
G PNKP polynucleotide kinase 3'-phosphatase involved_in IEA Ensembl
UniProt
TreeGrafter
InterPro		 GO_REF:0000002 GO_REF:0000043 GO_REF:0000107 GO_REF:0000118 NCBI chr19:46,874,216...46,880,954
Ensembl chr19:55,790,048...55,796,762 		JBrowse link
G POLA1 DNA polymerase alpha 1, catalytic subunit NOT|involved_in ISO (PMID:3335506)
(PMID:11470886)		 UniProt PMID:3335506 PMID:11470886 NCBI chr  X:17,290,805...17,592,163
Ensembl chr  X:24,657,878...24,960,231 		JBrowse link
G POLB DNA polymerase beta involved_in IEA InterPro
UniProt		 GO_REF:0000002 GO_REF:0000043 NCBI chr 8:41,582,370...41,615,950
Ensembl chr 8:39,026,991...39,060,464 		JBrowse link
G POLD1 DNA polymerase delta 1, catalytic subunit involved_in IEA UniProt GO_REF:0000043 NCBI chr19:47,347,919...47,381,772
Ensembl chr19:56,251,356...56,297,611 		JBrowse link
G POLD2 DNA polymerase delta 2, accessory subunit involved_in IEA UniProt GO_REF:0000043 NCBI chr 7:44,829,040...44,837,928
Ensembl chr 7:44,896,320...44,905,393 		JBrowse link
G POLE DNA polymerase epsilon, catalytic subunit involved_in IEA InterPro GO_REF:0000002 NCBI chr12:129,975,750...130,038,402
Ensembl chr12:134,695,976...134,758,650 		JBrowse link
G POLG DNA polymerase gamma, catalytic subunit involved_in IEA UniProt GO_REF:0000117 NCBI chr15:68,008,214...68,028,241
Ensembl chr15:87,214,451...87,234,739 		JBrowse link
G POLH DNA polymerase eta involved_in IEA InterPro
UniProt		 GO_REF:0000002 GO_REF:0000043 NCBI chr 6:43,168,195...43,205,811
Ensembl chr 6:44,462,225...44,495,704 		JBrowse link
G POLI DNA polymerase iota involved_in IEA InterPro GO_REF:0000002 NCBI chr18:47,653,545...47,706,614
Ensembl chr18:50,990,959...51,019,666 		JBrowse link
G POLK DNA polymerase kappa involved_in
acts_upstream_of_or_within		 IEA InterPro
Ensembl
UniProt		 GO_REF:0000002 GO_REF:0000043 GO_REF:0000107 NCBI chr 5:39,700,659...39,788,727
Ensembl chr 5:40,311,526...40,401,003 		JBrowse link
G POLL DNA polymerase lambda involved_in IEA UniProt
InterPro		 GO_REF:0000002 GO_REF:0000043 NCBI chr10:98,181,049...98,190,463
Ensembl chr10:101,653,978...101,663,360 		JBrowse link
G POLM DNA polymerase mu involved_in IEA InterPro
UniProt		 GO_REF:0000002 GO_REF:0000043 NCBI chr 7:44,785,797...44,796,624
Ensembl chr 7:44,852,594...44,862,816 		JBrowse link
G POLQ DNA polymerase theta acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr 3:118,535,968...118,648,275
Ensembl chr 3:125,446,829...125,559,283 		JBrowse link
G PRKDC protein kinase, DNA-activated, catalytic subunit involved_in IEA UniProt
InterPro		 GO_REF:0000002 GO_REF:0000043 NCBI chr 8:44,201,391...44,386,803
Ensembl chr 8:41,593,029...41,778,299 		JBrowse link
G PRPF19 pre-mRNA processing factor 19 involved_in IEA UniProt GO_REF:0000043 NCBI chr11:56,153,965...56,169,821
Ensembl chr11:59,595,120...59,607,828 		JBrowse link
G PSME4 proteasome activator subunit 4 involved_in IEA UniProt
Ensembl		 GO_REF:0000043 GO_REF:0000107 NCBI chr2A:54,007,224...54,113,557
Ensembl chr2A:54,919,094...55,024,551 		JBrowse link
G PWWP3A PWWP domain containing 3A, DNA repair factor involved_in IEA Ensembl
TreeGrafter		 GO_REF:0000107 GO_REF:0000118 Ensembl chr19:1,331,312...1,352,260 JBrowse link
G RAD1 RAD1 checkpoint DNA exonuclease involved_in IEA TreeGrafter
UniProt		 GO_REF:0000043 GO_REF:0000118 NCBI chr 5:75,452,153...75,465,022
Ensembl chr 5:80,732,954...80,744,448 		JBrowse link
G RAD17 RAD17 checkpoint clamp loader component involved_in IEA InterPro
TreeGrafter		 GO_REF:0000002 GO_REF:0000118 NCBI chr 5:44,586,083...44,630,719
Ensembl chr 5:46,156,294...46,202,197 		JBrowse link
G RAD18 RAD18 E3 ubiquitin protein ligase involved_in IEA UniProt
InterPro		 GO_REF:0000002 GO_REF:0000043 NCBI chr 3:8,832,910...8,918,067
Ensembl chr 3:9,076,500...9,161,585 		JBrowse link
G RAD23A RAD23 homolog A, nucleotide excision repair protein involved_in IEA UniProt GO_REF:0000043 NCBI chr19:12,508,232...12,516,068
Ensembl chr19:13,250,718...13,258,482 		JBrowse link
G RAD23B RAD23 homolog B, nucleotide excision repair protein involved_in IEA UniProt GO_REF:0000043 NCBI chr 9:78,433,461...78,482,157
Ensembl chr 9:106,622,377...106,670,317 		JBrowse link
G RAD50 RAD50 double strand break repair protein involved_in IEA InterPro
UniProt
Ensembl		 GO_REF:0000002 GO_REF:0000043 GO_REF:0000107 NCBI chr 5:127,972,630...128,059,911
Ensembl chr 5:134,134,495...134,222,261 		JBrowse link
G RAD51 RAD51 recombinase involved_in IEA InterPro
UniProt		 GO_REF:0000002 GO_REF:0000043 GO_REF:0000117 NCBI chr15:19,638,310...19,672,474
Ensembl chr15:37,891,056...37,925,207 		JBrowse link
G RAD51B RAD51 paralog B involved_in IEA InterPro GO_REF:0000002 NCBI chr14:48,399,345...49,314,577
Ensembl chr14:67,281,148...68,110,693 		JBrowse link
G RAD51C RAD51 paralog C involved_in IEA Ensembl
UniProt
InterPro		 GO_REF:0000002 GO_REF:0000043 GO_REF:0000107 NCBI chr17:52,769,446...52,808,467
Ensembl chr17:57,621,552...57,660,701 		JBrowse link
G RAD51D RAD51 paralog D involved_in IEA InterPro
UniProt		 GO_REF:0000002 GO_REF:0000043 GO_REF:0000117 NCBI chr17:21,666,236...21,693,886
Ensembl chr17:21,958,212...21,978,406 		JBrowse link
G RAD52 RAD52 homolog, DNA repair protein involved_in IEA InterPro
UniProt		 GO_REF:0000002 GO_REF:0000043 NCBI chr12:986,372...1,066,708
Ensembl chr12:946,825...985,668 		JBrowse link
G RAD9A RAD9 checkpoint clamp component A involved_in IEA InterPro
TreeGrafter
UniProt		 GO_REF:0000002 GO_REF:0000104 GO_REF:0000118 NCBI chr11:62,675,480...62,756,886
Ensembl chr11:66,061,208...66,068,214 		JBrowse link
G RAD9B RAD9 checkpoint clamp component B involved_in IEA InterPro
TreeGrafter
UniProt		 GO_REF:0000002 GO_REF:0000104 GO_REF:0000118 NCBI chr12:108,072,061...108,103,338
Ensembl chr12:111,467,845...111,498,350 		JBrowse link
G RBBP8 RB binding protein 8, endonuclease involved_in IEA InterPro
UniProt		 GO_REF:0000002 GO_REF:0000043 NCBI chr18:16,181,652...16,274,597
Ensembl chr18:19,811,989...19,903,522 		JBrowse link
G RDM1 RAD52 motif containing 1 involved_in IEA UniProt GO_REF:0000117 NCBI chr17:20,865,264...20,877,943
Ensembl chr17:21,160,867...21,173,503 		JBrowse link
G RECQL RecQ like helicase involved_in IEA UniProt
TreeGrafter		 GO_REF:0000117 GO_REF:0000118 NCBI chr12:64,796,383...64,829,165
Ensembl chr12:67,400,315...67,432,724 		JBrowse link
G RECQL4 RecQ like helicase 4 involved_in IEA UniProt
TreeGrafter		 GO_REF:0000117 GO_REF:0000118 Ensembl chr 8:144,267,101...144,276,985 JBrowse link
G RECQL5 RecQ like helicase 5 involved_in IEA Ensembl
TreeGrafter
UniProt		 GO_REF:0000107 GO_REF:0000117 GO_REF:0000118 NCBI chr17:69,577,778...69,618,068
Ensembl chr17:75,128,325...75,168,254 		JBrowse link
G REV1 REV1 DNA directed polymerase involved_in IEA UniProt
InterPro		 GO_REF:0000002 GO_REF:0000043 NCBI chr2A:99,808,519...99,897,989
Ensembl chr2A:100,329,475...100,418,678 		JBrowse link
G REV3L REV3 like, DNA directed polymerase zeta catalytic subunit involved_in
acts_upstream_of_or_within		 IEA UniProt
InterPro
Ensembl		 GO_REF:0000002 GO_REF:0000043 GO_REF:0000107 NCBI chr 6:109,104,341...109,291,268
Ensembl chr 6:113,181,759...113,367,625 		JBrowse link
G REXO4 REX4 homolog, 3'-5' exonuclease involved_in IEA Ensembl GO_REF:0000107 NCBI chr 9:104,528,838...104,540,813
Ensembl chr 9:133,140,392...133,152,413 		JBrowse link
G RFC1 replication factor C subunit 1 involved_in IEA InterPro GO_REF:0000002 NCBI chr 4:33,618,590...33,695,999
Ensembl chr 4:39,471,719...39,548,548 		JBrowse link
G RFC2 replication factor C subunit 2 involved_in IEA TreeGrafter GO_REF:0000118 Ensembl chr 7:81,378,937...81,401,937 JBrowse link
G RFC3 replication factor C subunit 3 involved_in IEA TreeGrafter GO_REF:0000118 NCBI chr13:15,073,464...15,220,646
Ensembl chr13:33,503,439...33,523,403 		JBrowse link
G RFC4 replication factor C subunit 4 involved_in IEA TreeGrafter GO_REF:0000118 NCBI chr 3:183,824,865...183,841,895
Ensembl chr 3:192,290,639...192,307,839 		JBrowse link
G RFC5 replication factor C subunit 5 involved_in IEA TreeGrafter GO_REF:0000118 NCBI chr12:115,595,398...115,611,442
Ensembl chr12:118,973,560...118,990,308 		JBrowse link
G RFWD3 ring finger and WD repeat domain 3 involved_in IEA UniProt GO_REF:0000043 NCBI chr16:55,187,178...55,233,265
Ensembl chr16:74,541,450...74,586,951 		JBrowse link
G RMI2 RecQ mediated genome instability 2 involved_in IEA TreeGrafter GO_REF:0000118 NCBI chr16:10,286,136...10,292,377
Ensembl chr16:11,480,066...11,513,561 		JBrowse link
G RNF138 ring finger protein 138 involved_in IEA UniProt GO_REF:0000043 NCBI chr18:25,300,480...25,340,010 JBrowse link
G RNF168 ring finger protein 168 involved_in IEA UniProt GO_REF:0000043 NCBI chr 3:193,814,785...193,848,620
Ensembl chr 3:203,756,589...203,790,687 		JBrowse link
G RNF8 ring finger protein 8 involved_in IEA UniProt GO_REF:0000043 NCBI chr 6:36,918,705...36,955,380
Ensembl chr 6:38,108,414...38,145,949 		JBrowse link
G RPA1 replication protein A1 involved_in IEA InterPro
Ensembl		 GO_REF:0000002 GO_REF:0000107 NCBI chr17:1,813,610...1,886,093
Ensembl chr17:1,705,380...1,775,596 		JBrowse link
G RPA2 replication protein A2 involved_in IEA InterPro GO_REF:0000002 NCBI chr 1:27,151,784...27,175,110
Ensembl chr 1:28,191,731...28,214,666 		JBrowse link
G RPA3 replication protein A3 involved_in IEA InterPro
Ensembl		 GO_REF:0000002 GO_REF:0000107 NCBI chr 7:8,361,623...8,365,098
Ensembl chr 7:7,713,629...7,717,169 		JBrowse link
G RPA4 replication protein A4 involved_in ISO (PMID:20545304) ComplexPortal PMID:20545304 NCBI chr  X:86,114,330...86,116,687 JBrowse link
G RPS3 ribosomal protein S3 involved_in ISO (PMID:19059439) UniProt PMID:19059439 NCBI chr11:70,460,702...70,466,909
Ensembl chr11:73,762,794...73,768,982 		JBrowse link
G RRM1 ribonucleotide reductase catalytic subunit M1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr11:3,956,528...3,999,205
Ensembl chr11:4,068,119...4,110,474 		JBrowse link
G RRM2B ribonucleotide reductase regulatory TP53 inducible subunit M2B involved_in
acts_upstream_of_or_within		 IEA Ensembl GO_REF:0000107 NCBI chr 8:98,854,101...98,890,365
Ensembl chr 8:101,019,699...101,052,056 		JBrowse link
G RTEL1 regulator of telomere elongation helicase 1 involved_in IEA UniProt
InterPro		 GO_REF:0000002 GO_REF:0000043 GO_REF:0000104 Ensembl chr20:61,581,331...61,618,718 JBrowse link
G RUVBL1 RuvB like AAA ATPase 1 involved_in IEA UniProt GO_REF:0000043 NCBI chr 3:125,120,524...125,200,859
Ensembl chr 3:132,486,229...132,528,918 		JBrowse link
G RUVBL2 RuvB like AAA ATPase 2 involved_in IEA UniProt GO_REF:0000043 NCBI chr19:45,995,394...46,017,835
Ensembl chr19:54,739,474...54,761,407 		JBrowse link
G SAMHD1 SAM and HD domain containing deoxynucleoside triphosphate triphosphohydrolase 1 involved_in IEA UniProt GO_REF:0000043 NCBI chr20:33,224,200...33,282,018
Ensembl chr20:34,341,367...34,398,314 		JBrowse link
G SFR1 SWI5 dependent homologous recombination repair protein 1 involved_in IEA UniProt GO_REF:0000043 NCBI chr10:100,721,780...100,726,204
Ensembl chr10:104,180,672...104,184,880 		JBrowse link
G SLC25A16 solute carrier family 25 member 16 involved_in IEA UniProt GO_REF:0000043 NCBI chr10:64,898,024...64,956,541
Ensembl chr10:67,506,006...67,549,308
Ensembl chr10:67,506,006...67,549,308 		JBrowse link
G SLX1A SLX1 homolog A, structure-specific endonuclease subunit involved_in IEA InterPro
UniProt		 GO_REF:0000002 GO_REF:0000043 GO_REF:0000104
G SLX4 SLX4 structure-specific endonuclease subunit involved_in IEA InterPro
Ensembl
UniProt		 GO_REF:0000002 GO_REF:0000043 GO_REF:0000107 NCBI chr16:2,502,334...2,532,172
Ensembl chr16:3,678,018...3,707,842 		JBrowse link
G SMARCA5 SNF2 related chromatin remodeling ATPase 5 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 4:135,874,888...135,917,096
Ensembl chr 4:147,174,060...147,214,809 		JBrowse link
G SMARCAD1 SNF2 related chromatin remodeling ATPase with DExD box 1 involved_in IEA UniProt GO_REF:0000043 NCBI chr 4:86,567,722...86,651,527
Ensembl chr 4:97,240,614...97,324,366 		JBrowse link
G SMARCAL1 SNF2 related chromatin remodeling annealing helicase 1 involved_in IEA TreeGrafter GO_REF:0000118 NCBI chr2B:103,672,934...103,743,802
Ensembl chr2B:222,276,353...222,347,258 		JBrowse link
G SMC1A structural maintenance of chromosomes 1A involved_in IEA UniProt GO_REF:0000043 NCBI chr  X:45,576,100...45,637,314
Ensembl chr  X:53,697,154...53,745,636 		JBrowse link
G SMC6 structural maintenance of chromosomes 6 involved_in IEA UniProt GO_REF:0000043 NCBI chr2A:17,648,371...17,735,910
Ensembl chr2A:17,776,276...17,854,052 		JBrowse link
G SMUG1 single-strand-selective monofunctional uracil-DNA glycosylase 1 involved_in ISO
IEA		 RGD
UniProt		 PMID:12718542 GO_REF:0000043 RGD:2317001 NCBI chr12:34,564,624...34,572,063
Ensembl chr12:35,288,412...35,296,670 		JBrowse link
G SPIB Spi-B transcription factor involved_in IEA UniProt GO_REF:0000043 NCBI chr19:47,382,653...47,395,178
Ensembl chr19:56,251,356...56,297,611 		JBrowse link
G SPRTN SprT-like N-terminal domain involved_in IEA InterPro
UniProt		 GO_REF:0000002 GO_REF:0000043 NCBI chr 1:206,889,897...206,906,047
Ensembl chr 1:211,914,082...211,931,093 		JBrowse link
G SSRP1 structure specific recognition protein 1 involved_in IEA UniProt GO_REF:0000043 NCBI chr11:52,567,420...52,577,324
Ensembl chr 3:160,057,285...160,068,177 		JBrowse link
G SUPT16H SPT16 homolog, facilitates chromatin remodeling subunit involved_in IEA UniProt GO_REF:0000043 GO_REF:0000104 NCBI chr14:2,169,169...2,201,911
Ensembl chr14:20,247,325...20,280,074 		JBrowse link
G SWI5 SWI5 homologous recombination repair protein involved_in IEA UniProt GO_REF:0000043 NCBI chr 9:99,396,439...99,410,054
Ensembl chr 9:128,064,569...128,078,380 		JBrowse link
G TAOK1 TAO kinase 1 involved_in IEA UniProt GO_REF:0000043 NCBI chr17:27,222,725...27,385,713
Ensembl chr17:27,746,797...27,840,623 		JBrowse link
G TAOK3 TAO kinase 3 involved_in IEA UniProt GO_REF:0000043 NCBI chr12:115,730,619...115,954,149
Ensembl chr12:119,109,642...119,226,502 		JBrowse link
G TDG thymine DNA glycosylase involved_in IEA UniProt GO_REF:0000043 NCBI chr12:101,543,945...101,567,035
Ensembl chr12:104,938,519...104,961,284 		JBrowse link
G TDP1 tyrosyl-DNA phosphodiesterase 1 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:21390131) UniProt
TreeGrafter
MGI
InterPro
Ensembl		 PMID:21390131 GO_REF:0000002 GO_REF:0000043 GO_REF:0000107 GO_REF:0000118 NCBI chr14:70,574,066...70,662,562
Ensembl chr14:89,926,462...90,014,802 		JBrowse link
G TDP2 tyrosyl-DNA phosphodiesterase 2 involved_in IEA UniProt GO_REF:0000043 NCBI chr 6:24,487,551...24,505,268
Ensembl chr 6:24,819,494...24,837,189 		JBrowse link
G TIMELESS timeless circadian regulator involved_in IEA TreeGrafter GO_REF:0000118 NCBI chr12:32,465,529...32,497,581
Ensembl chr12:32,718,649...32,750,728 		JBrowse link
G TONSL tonsoku like, DNA repair protein involved_in IEA UniProt GO_REF:0000043 NCBI chr 8:141,195,959...141,211,849
Ensembl chr 8:144,185,674...144,201,040 		JBrowse link
G TOP3A DNA topoisomerase III alpha involved_in IEA TreeGrafter GO_REF:0000118 NCBI chr17:32,814,448...32,858,076
Ensembl chr17:37,897,037...37,936,135 		JBrowse link
G TOP3B DNA topoisomerase III beta involved_in IEA TreeGrafter GO_REF:0000118 NCBI chr22:4,076,295...4,102,086
Ensembl chr22:20,557,248...20,583,464 		JBrowse link
G TP53BP1 tumor protein p53 binding protein 1 acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr15:22,364,696...22,472,499
Ensembl chr15:40,519,012...40,626,741 		JBrowse link
G TRIM28 tripartite motif containing 28 involved_in IEA Ensembl GO_REF:0000107 NCBI chr19:55,557,130...55,563,802
Ensembl chr19:64,371,477...64,377,144 		JBrowse link
G TRIP12 thyroid hormone receptor interactor 12 involved_in IEA UniProt GO_REF:0000043 NCBI chr2B:117,013,343...117,175,296
Ensembl chr2B:235,820,182...235,979,780 		JBrowse link
G TRRAP transformation/transcription domain associated protein involved_in IEA TreeGrafter GO_REF:0000118 NCBI chr 7:90,845,518...90,981,700
Ensembl chr 7:104,351,320...104,486,722 		JBrowse link
G TTF2 transcription termination factor 2 involved_in IEA TreeGrafter GO_REF:0000118 NCBI chr 1:85,417,804...85,459,440
Ensembl chr 1:120,413,049...120,454,630 		JBrowse link
G UBE2A ubiquitin conjugating enzyme E2 A involved_in IEA Ensembl GO_REF:0000107 NCBI chr  X:108,606,271...108,617,000
Ensembl chr  X:119,034,235...119,049,655 		JBrowse link
G UBE2B ubiquitin conjugating enzyme E2 B involved_in IEA Ensembl GO_REF:0000107 NCBI chr 5:129,775,011...129,794,853
Ensembl chr 5:135,925,217...135,944,609 		JBrowse link
G UBE2T ubiquitin conjugating enzyme E2 T involved_in IEA Ensembl GO_REF:0000107 NCBI chr 1:177,929,298...177,939,027
Ensembl chr 1:182,227,166...182,236,712 		JBrowse link
G UIMC1 ubiquitin interaction motif containing 1 involved_in IEA UniProt
InterPro		 GO_REF:0000002 GO_REF:0000043 NCBI chr 5:172,205,958...172,321,758
Ensembl chr 5:179,271,577...179,374,229 		JBrowse link
G UNG uracil DNA glycosylase involved_in IEA UniProt
InterPro		 GO_REF:0000002 GO_REF:0000043 NCBI chr12:106,674,073...106,687,054
Ensembl chr12:110,067,879...110,080,891 		JBrowse link
G UPF1 UPF1 RNA helicase and ATPase involved_in IEA Ensembl GO_REF:0000107 NCBI chr19:18,269,878...18,306,199
Ensembl chr19:19,292,725...19,313,224 		JBrowse link
G USP10 ubiquitin specific peptidase 10 involved_in IEA UniProt GO_REF:0000043 NCBI chr16:65,367,463...65,447,549
Ensembl chr16:84,712,913...84,787,714 		JBrowse link
G USP3 ubiquitin specific peptidase 3 involved_in IEA Ensembl GO_REF:0000107 NCBI chr15:42,450,782...42,541,162
Ensembl chr15:60,746,406...60,830,535 		JBrowse link
G USP45 ubiquitin specific peptidase 45 acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr 6:97,273,498...97,356,749
Ensembl chr 6:101,155,903...101,238,682 		JBrowse link
G UVRAG UV radiation resistance associated involved_in IEA Ensembl GO_REF:0000107 NCBI chr11:70,870,341...71,197,559
Ensembl chr11:74,172,919...74,496,046 		JBrowse link
G VCP valosin containing protein involved_in IEA UniProt GO_REF:0000043 NCBI chr 9:34,907,147...34,923,227
Ensembl chr 9:35,712,937...35,729,588 		JBrowse link
G WDHD1 WD repeat and HMG-box DNA binding protein 1 involved_in IEA TreeGrafter GO_REF:0000118 NCBI chr14:35,528,981...35,614,145
Ensembl chr14:53,807,684...53,889,703 		JBrowse link
G WRN WRN RecQ like helicase involved_in IEA InterPro
TreeGrafter
UniProt		 GO_REF:0000002 GO_REF:0000117 GO_REF:0000118 NCBI chr 8:30,353,643...30,492,978
Ensembl chr 8:27,541,145...27,679,855 		JBrowse link
G XPA XPA, DNA damage recognition and repair factor involved_in
acts_upstream_of_or_within		 IEA UniProt
Ensembl		 GO_REF:0000043 GO_REF:0000107 NCBI chr 9:68,726,723...68,788,049
Ensembl chr 9:96,886,795...96,909,254 		JBrowse link
G XPC XPC complex subunit, DNA damage recognition and repair factor involved_in
acts_upstream_of_or_within		 IEA UniProt
Ensembl		 GO_REF:0000043 GO_REF:0000107 GO_REF:0000117 NCBI chr 3:14,063,499...14,097,023
Ensembl chr 3:14,403,958...14,437,377 		JBrowse link
G XRCC1 X-ray repair cross complementing 1 involved_in
acts_upstream_of_or_within		 IEA UniProt
Ensembl		 GO_REF:0000043 GO_REF:0000107 NCBI chr19:40,485,052...40,522,188
Ensembl chr19:49,094,014...49,125,520 		JBrowse link
G XRCC2 X-ray repair cross complementing 2 involved_in IEA Ensembl
InterPro		 GO_REF:0000002 GO_REF:0000107 NCBI chr 7:144,229,031...144,256,854
Ensembl chr 7:156,378,685...156,406,516 		JBrowse link
G XRCC3 X-ray repair cross complementing 3 involved_in IEA InterPro
UniProt
Ensembl		 GO_REF:0000002 GO_REF:0000043 GO_REF:0000107 NCBI chr14:84,323,644...84,341,763
Ensembl chr14:104,131,903...104,149,037 		JBrowse link
G XRCC4 X-ray repair cross complementing 4 involved_in IEA UniProt GO_REF:0000043 NCBI chr 5:31,927,463...32,202,394
Ensembl chr 5:32,246,320...32,521,490 		JBrowse link
G XRCC5 X-ray repair cross complementing 5 involved_in IEA UniProt GO_REF:0000043 GO_REF:0000104 NCBI chr2B:103,371,459...103,468,419
Ensembl chr2B:221,972,742...222,071,235 		JBrowse link
G XRCC6 X-ray repair cross complementing 6 involved_in IEA UniProt GO_REF:0000043 NCBI chr22:22,516,281...22,557,379
Ensembl chr22:40,603,038...40,643,314 		JBrowse link
G ZBTB1 zinc finger and BTB domain containing 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr14:45,085,146...45,114,965
Ensembl chr14:63,354,458...63,359,403 		JBrowse link
G ZMPSTE24 zinc metallopeptidase STE24 acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr 1:39,545,264...39,589,721
Ensembl chr 1:40,869,076...40,912,747 		JBrowse link
G ZNF668 zinc finger protein 668 involved_in IEA Ensembl GO_REF:0000107 NCBI chr16:23,893,617...23,906,552
Ensembl chr16:31,425,412...31,442,494 		JBrowse link
G ZRANB3 zinc finger RANBP2-type containing 3 involved_in IEA Ensembl
TreeGrafter		 GO_REF:0000107 GO_REF:0000118 NCBI chr2B:24,331,731...24,665,652
Ensembl chr2B:139,234,909...139,577,193 		JBrowse link
DNA repair-dependent chromatin remodeling term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G APBB1 amyloid beta precursor protein binding family B member 1 involved_in ISO PMID:19282473 UniProt PMID:19282473 RGD:8553580 NCBI chr11:6,526,477...6,550,509
Ensembl chr11:6,209,812...6,225,972 		JBrowse link
G APLF aprataxin and PNKP like factor involved_in IEA Ensembl GO_REF:0000107 NCBI chr2A:68,509,314...68,629,192
Ensembl chr2A:69,632,459...69,744,611 		JBrowse link
G ASF1A anti-silencing function 1A histone chaperone involved_in IEA Ensembl GO_REF:0000107 NCBI chr 6:116,702,314...116,717,445
Ensembl chr 6:120,843,461...120,858,471 		JBrowse link
G BABAM1 BRISC and BRCA1 A complex member 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr19:16,755,518...16,767,634
Ensembl chr19:17,729,568...17,742,447 		JBrowse link
G BRCC3 BRCA1/BRCA2-containing complex subunit 3 involved_in IEA Ensembl GO_REF:0000107 NCBI chr  X:144,550,320...144,592,795
Ensembl chr  X:154,389,283...154,428,669 		JBrowse link
G DTX3L deltex E3 ubiquitin ligase 3L involved_in IEA Ensembl GO_REF:0000107 NCBI chr 3:119,654,019...119,664,918
Ensembl chr 3:126,558,924...126,569,807 		JBrowse link
G HDAC3 histone deacetylase 3 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 5:136,981,790...136,997,786
Ensembl chr 5:143,094,406...143,110,322 		JBrowse link
G HDGFL2 HDGF like 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chr19:3,489,986...3,521,935
Ensembl chr19:4,440,491...4,471,212 		JBrowse link
G KAT5 lysine acetyltransferase 5 involved_in IEA Ensembl GO_REF:0000107 NCBI chr11:61,071,118...61,078,667
Ensembl chr11:64,404,572...64,412,667 		JBrowse link
G KDM1A lysine demethylase 1A acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr 1:22,205,624...22,269,571
Ensembl chr 1:23,153,066...23,217,692 		JBrowse link
G LOC100991754 histone PARylation factor 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 4:161,949,343...161,977,887
Ensembl chr 4:174,021,060...174,049,213 		JBrowse link
G PARP2 poly(ADP-ribose) polymerase 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chr14:1,215,727...1,230,006
Ensembl chr14:19,269,046...19,282,853 		JBrowse link
G PHF1 PHD finger protein 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 6:32,990,080...32,995,785
Ensembl chr 6:34,101,371...34,107,124 		JBrowse link
G RNF168 ring finger protein 168 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 3:193,814,785...193,848,620
Ensembl chr 3:203,756,589...203,790,687 		JBrowse link
G RNF8 ring finger protein 8 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 6:36,918,705...36,955,380
Ensembl chr 6:38,108,414...38,145,949 		JBrowse link
G SIRT1 sirtuin 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr10:64,368,878...64,401,684
Ensembl chr10:66,681,598...66,715,069 		JBrowse link
G SIRT6 sirtuin 6 involved_in ISO (PMID:32584788) UniProt PMID:32584788 NCBI chr19:3,196,092...3,204,602
Ensembl chr19:4,146,057...4,154,126 		JBrowse link
G SIRT7 sirtuin 7 involved_in IEA Ensembl GO_REF:0000107 NCBI chr17:76,317,560...76,323,761
Ensembl chr17:82,020,077...82,026,289 		JBrowse link
G TRIP12 thyroid hormone receptor interactor 12 involved_in ISO (PMID:22884692) UniProt PMID:22884692 NCBI chr2B:117,013,343...117,175,296
Ensembl chr2B:235,820,182...235,979,780 		JBrowse link
G UBR5 ubiquitin protein ligase E3 component n-recognin 5 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 8:98,904,557...99,064,121
Ensembl chr 8:101,067,435...101,224,913 		JBrowse link
G UIMC1 ubiquitin interaction motif containing 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 5:172,205,958...172,321,758
Ensembl chr 5:179,271,577...179,374,229 		JBrowse link
G USP3 ubiquitin specific peptidase 3 involved_in IEA Ensembl GO_REF:0000107 NCBI chr15:42,450,782...42,541,162
Ensembl chr15:60,746,406...60,830,535 		JBrowse link
G USP51 ubiquitin specific peptidase 51 involved_in ISO (PMID:27083998) UniProt PMID:27083998 NCBI chr  X:47,747,547...47,753,119 JBrowse link
DNA replication proofreading term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G POLD1 DNA polymerase delta 1, catalytic subunit involved_in
acts_upstream_of_or_within		 IEA TreeGrafter
Ensembl		 GO_REF:0000107 GO_REF:0000118 NCBI chr19:47,347,919...47,381,772
Ensembl chr19:56,251,356...56,297,611 		JBrowse link
G POLE DNA polymerase epsilon, catalytic subunit involved_in IEA TreeGrafter GO_REF:0000118 NCBI chr12:129,975,750...130,038,402
Ensembl chr12:134,695,976...134,758,650 		JBrowse link
G POLG DNA polymerase gamma, catalytic subunit involved_in IEA Ensembl GO_REF:0000107 NCBI chr15:68,008,214...68,028,241
Ensembl chr15:87,214,451...87,234,739 		JBrowse link
G SPIB Spi-B transcription factor involved_in IEA TreeGrafter GO_REF:0000118 NCBI chr19:47,382,653...47,395,178
Ensembl chr19:56,251,356...56,297,611 		JBrowse link
DNA synthesis involved in DNA repair term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G CDKN2D cyclin dependent kinase inhibitor 2D involved_in ISO (PMID:15750620) BHF-UCL PMID:15750620 NCBI chr19:10,118,302...10,120,957 JBrowse link
G HROB homologous recombination factor with OB-fold involved_in IEA Ensembl GO_REF:0000107 NCBI chr17:13,233,464...13,254,726
Ensembl chr17:13,395,473...13,409,505 		JBrowse link
G NYNRIN NYN domain and retroviral integrase containing involved_in IEA UniProt GO_REF:0000117 NCBI chr14:5,174,889...5,195,706
Ensembl chr14:23,298,139...23,318,905 		JBrowse link
G POLA1 DNA polymerase alpha 1, catalytic subunit involved_in IEA UniProt GO_REF:0000117 NCBI chr  X:17,290,805...17,592,163
Ensembl chr  X:24,657,878...24,960,231 		JBrowse link
G POLD1 DNA polymerase delta 1, catalytic subunit involved_in IEA Ensembl
UniProt		 GO_REF:0000107 GO_REF:0000117 NCBI chr19:47,347,919...47,381,772
Ensembl chr19:56,251,356...56,297,611 		JBrowse link
G POLD4 DNA polymerase delta 4, accessory subunit involved_in IEA InterPro
TreeGrafter		 GO_REF:0000002 GO_REF:0000118 NCBI chr11:62,709,988...62,712,038
Ensembl chr11:66,022,395...66,024,442 		JBrowse link
G POLE DNA polymerase epsilon, catalytic subunit involved_in IEA Ensembl
UniProt		 GO_REF:0000107 GO_REF:0000117 NCBI chr12:129,975,750...130,038,402
Ensembl chr12:134,695,976...134,758,650 		JBrowse link
G POLH DNA polymerase eta involved_in IEA Ensembl GO_REF:0000107 NCBI chr 6:43,168,195...43,205,811
Ensembl chr 6:44,462,225...44,495,704 		JBrowse link
G POLN DNA polymerase nu involved_in IEA UniProt GO_REF:0000117 NCBI chr 4:2,214,154...2,385,094
Ensembl chr 4:2,122,309...2,292,431 		JBrowse link
G POLQ DNA polymerase theta involved_in IEA UniProt GO_REF:0000117 NCBI chr 3:118,535,968...118,648,275
Ensembl chr 3:125,446,829...125,559,283 		JBrowse link
G REV3L REV3 like, DNA directed polymerase zeta catalytic subunit involved_in IEA UniProt GO_REF:0000117 NCBI chr 6:109,104,341...109,291,268
Ensembl chr 6:113,181,759...113,367,625 		JBrowse link
G SIRT1 sirtuin 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr10:64,368,878...64,401,684
Ensembl chr10:66,681,598...66,715,069 		JBrowse link
G SPIB Spi-B transcription factor involved_in IEA UniProt GO_REF:0000117 NCBI chr19:47,382,653...47,395,178
Ensembl chr19:56,251,356...56,297,611 		JBrowse link
G WRN WRN RecQ like helicase involved_in IEA Ensembl GO_REF:0000107 NCBI chr 8:30,353,643...30,492,978
Ensembl chr 8:27,541,145...27,679,855 		JBrowse link
G WRNIP1 WRN helicase interacting protein 1 involved_in IEA Ensembl
TreeGrafter		 GO_REF:0000107 GO_REF:0000118 NCBI chr 6:2,587,170...2,608,179
Ensembl chr 6:2,691,235...2,711,062 		JBrowse link
DNA synthesis involved in UV-damage excision repair term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G POLA1 DNA polymerase alpha 1, catalytic subunit NOT|involved_in ISO (PMID:1730053) UniProt PMID:1730053 NCBI chr  X:17,290,805...17,592,163
Ensembl chr  X:24,657,878...24,960,231 		JBrowse link
G POLD3 DNA polymerase delta 3, accessory subunit involved_in IEA TreeGrafter GO_REF:0000118 NCBI chr11:69,665,642...69,715,879
Ensembl chr11:72,969,844...73,018,295 		JBrowse link
G TREX1 three prime repair exonuclease 1 acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr 3:48,387,762...48,389,693
Ensembl chr 3:49,470,222...49,471,331 		JBrowse link
double-strand break repair term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ABRAXAS1 abraxas 1, BRCA1 A complex subunit involved_in IEA Ensembl GO_REF:0000107 NCBI chr 4:40,711,139...40,736,763
Ensembl chr 4:46,556,892...46,581,573 		JBrowse link
G ACTR5 actin related protein 5 involved_in IEA Ensembl GO_REF:0000107 NCBI chr20:35,073,297...35,097,955
Ensembl chr20:36,181,343...36,204,996 		JBrowse link
G APBB1 amyloid beta precursor protein binding family B member 1 involved_in ISO (PMID:17121854) UniProt PMID:17121854 NCBI chr11:6,526,477...6,550,509
Ensembl chr11:6,209,812...6,225,972 		JBrowse link
G APLF aprataxin and PNKP like factor involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:21211721) InterPro
TreeGrafter
MGI
Ensembl		 PMID:21211721 GO_REF:0000002 GO_REF:0000107 GO_REF:0000118 NCBI chr2A:68,509,314...68,629,192
Ensembl chr2A:69,632,459...69,744,611 		JBrowse link
G ATM ATM serine/threonine kinase involved_in IEA Ensembl GO_REF:0000107 NCBI chr11:103,109,979...103,256,405
Ensembl chr11:106,584,228...106,727,041 		JBrowse link
G ATR ATR serine/threonine kinase involved_in IEA Ensembl GO_REF:0000107 NCBI chr 3:139,482,606...139,612,274
Ensembl chr 3:147,075,185...147,196,261 		JBrowse link
G BABAM1 BRISC and BRCA1 A complex member 1 involved_in IEA Ensembl
TreeGrafter		 GO_REF:0000107 GO_REF:0000118 NCBI chr19:16,755,518...16,767,634
Ensembl chr19:17,729,568...17,742,447 		JBrowse link
G BABAM2 BRISC and BRCA1 A complex member 2 involved_in IEA UniProt
TreeGrafter
Ensembl		 GO_REF:0000104 GO_REF:0000107 GO_REF:0000118 NCBI chr2A:27,884,907...28,338,302
Ensembl chr2A:27,974,917...28,420,519 		JBrowse link
G BEND2 BEN domain containing 2 acts_upstream_of_or_within ISO (PMID:35613276) MGI PMID:35613276 NCBI chr  X:10,786,031...10,844,265
Ensembl chr  X:18,151,097...18,208,838 		JBrowse link
G BRCA1 BRCA1 DNA repair associated involved_in IEA Ensembl GO_REF:0000107 NCBI chr17:14,197,946...14,279,064
Ensembl chr17:14,428,526...14,506,815 		JBrowse link
G BRCA2 BRCA2 DNA repair associated involved_in
acts_upstream_of_or_within		 IEA Ensembl GO_REF:0000107 NCBI chr13:13,574,422...13,658,967
Ensembl chr13:32,010,066...32,091,332 		JBrowse link
G BRCC3 BRCA1/BRCA2-containing complex subunit 3 involved_in IEA UniProt
Ensembl		 GO_REF:0000104 GO_REF:0000107 NCBI chr  X:144,550,320...144,592,795
Ensembl chr  X:154,389,283...154,428,669 		JBrowse link
G CHEK2 checkpoint kinase 2 involved_in ISO (PMID:18317453) UniProt PMID:18317453 NCBI chr22:9,757,038...9,811,171 JBrowse link
G CSNK2A1 casein kinase 2 alpha 1 involved_in ISO (PMID:22325354) UniProt PMID:22325354 NCBI chr20:689,494...752,092
Ensembl chr20:456,629...521,126 		JBrowse link
G CSNK2A2 casein kinase 2 alpha 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chr16:38,426,399...38,466,575
Ensembl chr16:57,557,270...57,596,218 		JBrowse link
G DCLRE1C DNA cross-link repair 1C acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr10:14,901,335...14,956,947
Ensembl chr10:15,236,558...15,269,043 		JBrowse link
G DDX1 DEAD-box helicase 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr2A:15,582,499...15,619,751
Ensembl chr2A:15,716,044...15,753,623 		JBrowse link
G DTX3L deltex E3 ubiquitin ligase 3L involved_in IEA Ensembl GO_REF:0000107 NCBI chr 3:119,654,019...119,664,918
Ensembl chr 3:126,558,924...126,569,807 		JBrowse link
G EME1 essential meiotic structure-specific endonuclease 1 involved_in IEA Ensembl
TreeGrafter		 GO_REF:0000107 GO_REF:0000118 NCBI chr17:44,467,537...44,475,883
Ensembl chr17:49,341,791...49,349,959 		JBrowse link
G EME2 essential meiotic structure-specific endonuclease subunit 2 involved_in IEA Ensembl
TreeGrafter		 GO_REF:0000107 GO_REF:0000118 NCBI chr16:395,571...403,233
Ensembl chr16:1,825,622...1,829,557 		JBrowse link
G ERCC1 ERCC excision repair 1, endonuclease non-catalytic subunit involved_in
acts_upstream_of_or_within
NOT|acts_upstream_of_or_within		 IEA
ISO		 (PMID:11707424) UniProt
Ensembl
MGI		 PMID:11707424 GO_REF:0000107 GO_REF:0000117 NCBI chr19:42,356,039...42,427,754
Ensembl chr19:50,951,674...50,968,430 		JBrowse link
G ESCO2 establishment of sister chromatid cohesion N-acetyltransferase 2 acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr 8:27,049,858...27,080,396
Ensembl chr 8:24,251,557...24,284,001 		JBrowse link
G EXD2 exonuclease 3'-5' domain containing 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chr14:49,783,072...49,835,645
Ensembl chr14:68,656,669...68,707,834 		JBrowse link
G EYA1 EYA transcriptional coactivator and phosphatase 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 8:67,728,057...68,060,069
Ensembl chr 8:69,387,769...69,551,829 		JBrowse link
G EYA3 EYA transcriptional coactivator and phosphatase 3 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 1:27,230,623...27,349,355
Ensembl chr 1:28,270,116...28,386,878 		JBrowse link
G GGN gametogenetin involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:23451117) InterPro
MGI		 PMID:23451117 GO_REF:0000002 NCBI chr19:35,477,933...35,482,380
Ensembl chr19:44,049,853...44,052,795 		JBrowse link
G HMGB1 high mobility group box 1 involved_in ISO PMID:10866811 UniProt PMID:10866811 RGD:10449519 NCBI chr13:11,737,942...11,894,923
Ensembl chr13:30,174,899...30,179,527 		JBrowse link
G INO80 INO80 complex ATPase subunit involved_in IEA Ensembl GO_REF:0000107 NCBI chr15:19,920,980...20,058,117
Ensembl chr15:38,170,982...38,307,311 		JBrowse link
G KAT5 lysine acetyltransferase 5 involved_in IEA Ensembl GO_REF:0000107 NCBI chr11:61,071,118...61,078,667
Ensembl chr11:64,404,572...64,412,667 		JBrowse link
G LIG3 DNA ligase 3 involved_in IEA Ensembl
TreeGrafter		 GO_REF:0000107 GO_REF:0000118 NCBI chr17:21,776,483...21,805,706
Ensembl chr17:22,074,046...22,095,220 		JBrowse link
G LIG4 DNA ligase 4 involved_in
acts_upstream_of_or_within		 IEA Ensembl GO_REF:0000107 NCBI chr13:89,336,434...89,347,418
Ensembl chr13:108,475,820...108,478,555 		JBrowse link
G LOC100971082 sororin involved_in IEA Ensembl
TreeGrafter		 GO_REF:0000107 GO_REF:0000118 NCBI chr11:60,433,784...60,440,620
Ensembl chr11:63,772,458...63,779,154 		JBrowse link
G LOC100991754 histone PARylation factor 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 4:161,949,343...161,977,887
Ensembl chr 4:174,021,060...174,049,213 		JBrowse link
G LOC129394329 pachytene checkpoint protein 2 homolog acts_upstream_of_or_within
involved_in		 ISO (PMID:17696610)
(PMID:20711356)		 MGI
UniProt		 PMID:17696610 PMID:20711356
G MAD2L2 mitotic arrest deficient 2 like 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 1:10,436,532...10,454,023
Ensembl chr 1:11,654,963...11,661,526 		JBrowse link
G MARF1 meiosis regulator and mRNA stability factor 1 acts_upstream_of_or_within ISO (PMID:23090997) MGI PMID:23090997 Ensembl chr16:15,897,323...15,948,774 JBrowse link
G MEIOC meiosis specific with coiled-coil domain involved_in IEA Ensembl GO_REF:0000107 NCBI chr17:12,725,114...12,744,974
Ensembl chr17:12,901,882...12,920,285 		JBrowse link
G MRE11 MRE11 homolog, double strand break repair nuclease involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:17291760) InterPro
MGI
Ensembl
UniProt		 PMID:17291760 GO_REF:0000002 GO_REF:0000104 GO_REF:0000107 NCBI chr11:89,418,537...89,500,705
Ensembl chr11:92,918,549...92,985,966 		JBrowse link
G MSH2 mutS homolog 2 acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr2A:47,524,468...47,602,376
Ensembl chr2A:48,447,207...48,554,461 		JBrowse link
G MTA1 metastasis associated 1 involved_in IEA TreeGrafter GO_REF:0000118 NCBI chr14:86,058,412...86,111,736 JBrowse link
G MUS81 MUS81 structure-specific endonuclease subunit involved_in IEA InterPro
Ensembl		 GO_REF:0000002 GO_REF:0000107 NCBI chr11:61,220,699...61,226,747
Ensembl chr11:64,549,840...64,555,875 		JBrowse link
G NBN nibrin involved_in IEA Ensembl
InterPro		 GO_REF:0000002 GO_REF:0000107 NCBI chr 8:86,622,797...86,674,202
Ensembl chr 8:88,575,198...88,626,307 		JBrowse link
G NHEJ1 non-homologous end joining factor 1 involved_in IEA InterPro GO_REF:0000002 NCBI chr2B:106,326,596...106,419,928
Ensembl chr2B:224,926,183...225,008,788 		JBrowse link
G PARP1 poly(ADP-ribose) polymerase 1 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:21270334) Ensembl
TreeGrafter
MGI		 PMID:21270334 GO_REF:0000107 GO_REF:0000118 NCBI chr 1:201,820,355...201,867,673
Ensembl chr 1:206,812,981...206,860,356 		JBrowse link
G PARP2 poly(ADP-ribose) polymerase 2 involved_in IEA TreeGrafter GO_REF:0000118 NCBI chr14:1,215,727...1,230,006
Ensembl chr14:19,269,046...19,282,853 		JBrowse link
G PARP3 poly(ADP-ribose) polymerase family member 3 involved_in
acts_upstream_of_or_within		 IEA TreeGrafter
Ensembl		 GO_REF:0000107 GO_REF:0000118 NCBI chr 3:51,883,695...51,890,266
Ensembl chr 3:53,112,494...53,119,053 		JBrowse link
G PARP9 poly(ADP-ribose) polymerase family member 9 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 3:119,617,722...119,655,039
Ensembl chr 3:126,522,859...126,559,647 		JBrowse link
G PLK1 polo like kinase 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr16:14,420,972...14,432,821
Ensembl chr16:23,928,773...23,940,779 		JBrowse link
G POLN DNA polymerase nu involved_in IEA TreeGrafter GO_REF:0000118 NCBI chr 4:2,214,154...2,385,094
Ensembl chr 4:2,122,309...2,292,431 		JBrowse link
G POLQ DNA polymerase theta involved_in IEA Ensembl
TreeGrafter		 GO_REF:0000107 GO_REF:0000118 NCBI chr 3:118,535,968...118,648,275
Ensembl chr 3:125,446,829...125,559,283 		JBrowse link
G PRKDC protein kinase, DNA-activated, catalytic subunit involved_in
acts_upstream_of_or_within		 IEA UniProt
Ensembl
TreeGrafter		 GO_REF:0000107 GO_REF:0000117 GO_REF:0000118 NCBI chr 8:44,201,391...44,386,803
Ensembl chr 8:41,593,029...41,778,299 		JBrowse link
G RAD21L1 RAD21 cohesin complex component like 1 acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr20:1,385,935...1,413,301
Ensembl chr20:1,153,384...1,231,383 		JBrowse link
G RAD50 RAD50 double strand break repair protein involved_in IEA Ensembl
TreeGrafter
InterPro		 GO_REF:0000002 GO_REF:0000107 GO_REF:0000118 NCBI chr 5:127,972,630...128,059,911
Ensembl chr 5:134,134,495...134,222,261 		JBrowse link
G RAD52 RAD52 homolog, DNA repair protein involved_in IEA UniProt GO_REF:0000117 NCBI chr12:986,372...1,066,708
Ensembl chr12:946,825...985,668 		JBrowse link
G RAD54L RAD54 like acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr 1:45,549,586...45,581,711
Ensembl chr 1:46,905,598...46,936,259 		JBrowse link
G REC8 REC8 meiotic recombination protein involved_in IEA TreeGrafter GO_REF:0000118 NCBI chr14:4,948,100...4,956,492
Ensembl chr14:23,071,724...23,079,948 		JBrowse link
G RNF168 ring finger protein 168 involved_in IEA UniProt
TreeGrafter
Ensembl
InterPro		 GO_REF:0000002 GO_REF:0000104 GO_REF:0000107 GO_REF:0000118 NCBI chr 3:193,814,785...193,848,620
Ensembl chr 3:203,756,589...203,790,687 		JBrowse link
G RNF169 ring finger protein 169 involved_in IEA TreeGrafter GO_REF:0000118 NCBI chr11:69,821,842...69,909,297
Ensembl chr11:73,126,127...73,207,340 		JBrowse link
G RNF8 ring finger protein 8 involved_in IEA InterPro
TreeGrafter
UniProt
Ensembl		 GO_REF:0000002 GO_REF:0000104 GO_REF:0000107 GO_REF:0000118 NCBI chr 6:36,918,705...36,955,380
Ensembl chr 6:38,108,414...38,145,949 		JBrowse link
G SETX senataxin involved_in IEA Ensembl GO_REF:0000107 NCBI chr 9:103,381,356...103,474,902
Ensembl chr 9:132,016,767...132,109,665 		JBrowse link
G SIRT6 sirtuin 6 involved_in IEA Ensembl GO_REF:0000107 NCBI chr19:3,196,092...3,204,602
Ensembl chr19:4,146,057...4,154,126 		JBrowse link
G SMC5 structural maintenance of chromosomes 5 involved_in IEA InterPro GO_REF:0000002 NCBI chr 9:54,446,863...54,543,249 JBrowse link
G SMC6 structural maintenance of chromosomes 6 involved_in IEA InterPro GO_REF:0000002 NCBI chr2A:17,648,371...17,735,910
Ensembl chr2A:17,776,276...17,854,052 		JBrowse link
G SMCHD1 structural maintenance of chromosomes flexible hinge domain containing 1 involved_in IEA InterPro GO_REF:0000002 NCBI chr18:11,479,742...11,627,035
Ensembl chr18:13,785,912...13,933,887 		JBrowse link
G TDP1 tyrosyl-DNA phosphodiesterase 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr14:70,574,066...70,662,562
Ensembl chr14:89,926,462...90,014,802 		JBrowse link
G TDP2 tyrosyl-DNA phosphodiesterase 2 involved_in IEA Ensembl
TreeGrafter		 GO_REF:0000107 GO_REF:0000118 NCBI chr 6:24,487,551...24,505,268
Ensembl chr 6:24,819,494...24,837,189 		JBrowse link
G TNKS1BP1 tankyrase 1 binding protein 1 involved_in IEA Ensembl
TreeGrafter		 GO_REF:0000107 GO_REF:0000118 NCBI chr11:52,541,056...52,566,544
Ensembl chr 3:160,029,550...160,054,494 		JBrowse link
G TP53 tumor protein p53 acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr17:7,699,449...7,717,812
Ensembl chr17:7,684,922...7,706,120 		JBrowse link
G UIMC1 ubiquitin interaction motif containing 1 involved_in IEA InterPro
TreeGrafter
Ensembl		 GO_REF:0000002 GO_REF:0000107 GO_REF:0000118 NCBI chr 5:172,205,958...172,321,758
Ensembl chr 5:179,271,577...179,374,229 		JBrowse link
G VCP valosin containing protein involved_in IEA Ensembl GO_REF:0000107 NCBI chr 9:34,907,147...34,923,227
Ensembl chr 9:35,712,937...35,729,588 		JBrowse link
G WRN WRN RecQ like helicase involved_in IEA Ensembl GO_REF:0000107 NCBI chr 8:30,353,643...30,492,978
Ensembl chr 8:27,541,145...27,679,855 		JBrowse link
G XRCC1 X-ray repair cross complementing 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr19:40,485,052...40,522,188
Ensembl chr19:49,094,014...49,125,520 		JBrowse link
G XRCC4 X-ray repair cross complementing 4 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:11751629), (PMID:9875844) Ensembl
MGI
InterPro		 PMID:9875844 PMID:11751629 GO_REF:0000002 GO_REF:0000107 NCBI chr 5:31,927,463...32,202,394
Ensembl chr 5:32,246,320...32,521,490 		JBrowse link
G XRCC5 X-ray repair cross complementing 5 involved_in
acts_upstream_of_or_within		 IEA UniProt
Ensembl		 GO_REF:0000107 GO_REF:0000117 NCBI chr2B:103,371,459...103,468,419
Ensembl chr2B:221,972,742...222,071,235 		JBrowse link
G XRCC6 X-ray repair cross complementing 6 acts_upstream_of_or_within ISO (PMID:11751629) MGI PMID:11751629 NCBI chr22:22,516,281...22,557,379
Ensembl chr22:40,603,038...40,643,314 		JBrowse link
G ZGRF1 zinc finger GRF-type containing 1 involved_in IEA TreeGrafter GO_REF:0000118 NCBI chr 4:105,026,069...105,128,226
Ensembl chr 4:115,590,311...115,686,089 		JBrowse link
double-strand break repair involved in meiotic recombination term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G BRIP1 BRCA1 interacting DNA helicase 1 involved_in
acts_upstream_of_or_within		 IEA TreeGrafter
Ensembl		 GO_REF:0000107 GO_REF:0000118 NCBI chr17:55,786,568...55,973,366
Ensembl chr17:60,901,073...61,083,462 		JBrowse link
G BRME1 break repair meiotic recombinase recruitment factor 1 involved_in IEA InterPro GO_REF:0000002 NCBI chr19:13,444,811...13,468,748
Ensembl chr19:14,175,306...14,196,501 		JBrowse link
G DMC1 DNA meiotic recombinase 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr22:19,433,989...19,485,804
Ensembl chr22:37,253,609...37,305,769 		JBrowse link
G FANCD2 FA complementation group D2 involved_in IEA TreeGrafter GO_REF:0000118 NCBI chr 3:9,932,292...10,037,332
Ensembl chr 3:10,312,476...10,389,190 		JBrowse link
G HSF2BP heat shock transcription factor 2 binding protein involved_in IEA Ensembl GO_REF:0000107 NCBI chr21:29,787,768...29,916,089
Ensembl chr21:43,088,012...43,214,760 		JBrowse link
G MAJIN membrane anchored junction protein acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr11:60,294,618...60,328,902
Ensembl chr11:63,635,508...63,669,168 		JBrowse link
G MCMDC2 minichromosome maintenance domain containing 2 acts_upstream_of_or_within ISO (PMID:27760146) MGI PMID:27760146 NCBI chr 8:63,412,462...63,465,258 JBrowse link
G PRDM9 PR/SET domain 9 involved_in ISO (PMID:25894966), (PMID:29478809) UniProt PMID:25894966 PMID:29478809 NCBI chr 5:86,847,131...86,856,802
Ensembl chr 5:92,377,523...92,395,486 		JBrowse link
G RAD51 RAD51 recombinase involved_in IEA Ensembl GO_REF:0000107 NCBI chr15:19,638,310...19,672,474
Ensembl chr15:37,891,056...37,925,207 		JBrowse link
G SPO11 SPO11 initiator of meiotic double strand breaks acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr20:53,669,128...53,684,328
Ensembl chr20:54,948,661...54,963,384 		JBrowse link
G TERB1 telomere repeat binding bouquet formation protein 1 acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr16:47,071,709...47,118,205
Ensembl chr16:66,175,538...66,220,511 		JBrowse link
G TERB2 telomere repeat binding bouquet formation protein 2 acts_upstream_of_or_within ISO (PMID:30718482) MGI PMID:30718482 NCBI chr15:23,904,880...23,927,325 JBrowse link
double-strand break repair via alternative nonhomologous end joining term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G HELQ helicase, POLQ like involved_in IEA Ensembl GO_REF:0000107 NCBI chr 4:40,740,392...40,788,907
Ensembl chr 4:46,586,882...46,635,108 		JBrowse link
G HMCES 5-hydroxymethylcytosine binding, ES cell specific involved_in ISO (PMID:31806351) UniProt PMID:31806351 NCBI chr 3:126,339,758...126,367,166
Ensembl chr 3:133,694,676...133,721,519 		JBrowse link
G LIG3 DNA ligase 3 involved_in ISO (PMID:24837021)
(PMID:21655080)		 BHF-UCL PMID:21655080 PMID:24837021 NCBI chr17:21,776,483...21,805,706
Ensembl chr17:22,074,046...22,095,220 		JBrowse link
G NBN nibrin involved_in IEA Ensembl GO_REF:0000107 NCBI chr 8:86,622,797...86,674,202
Ensembl chr 8:88,575,198...88,626,307 		JBrowse link
G PLK1 polo like kinase 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr16:14,420,972...14,432,821
Ensembl chr16:23,928,773...23,940,779 		JBrowse link
G POLQ DNA polymerase theta involved_in IEA Ensembl
TreeGrafter		 GO_REF:0000107 GO_REF:0000118 NCBI chr 3:118,535,968...118,648,275
Ensembl chr 3:125,446,829...125,559,283 		JBrowse link
G RHNO1 RAD9-HUS1-RAD1 interacting nuclear orphan 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr12:2,999,089...3,011,911
Ensembl chr12:2,930,957...2,943,419 		JBrowse link
G TOPBP1 DNA topoisomerase II binding protein 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 3:130,667,998...130,729,569
Ensembl chr 3:138,143,893...138,203,363 		JBrowse link
double-strand break repair via break-induced replication term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G CDC45 cell division cycle 45 involved_in IEA TreeGrafter GO_REF:0000118 NCBI chr22:2,239,040...2,279,807
Ensembl chr22:17,913,729...17,955,195 		JBrowse link
G GINS2 GINS complex subunit 2 involved_in IEA TreeGrafter GO_REF:0000118 NCBI chr16:66,344,706...66,356,079
Ensembl chr16:85,681,716...85,691,626 		JBrowse link
G GINS4 GINS complex subunit 4 involved_in IEA TreeGrafter GO_REF:0000118 NCBI chr 8:40,774,253...40,790,609
Ensembl chr 8:38,224,907...38,240,562 		JBrowse link
G MCM2 minichromosome maintenance complex component 2 involved_in IEA TreeGrafter GO_REF:0000118 NCBI chr 3:124,643,362...124,667,121
Ensembl chr 3:131,950,887...131,974,641 		JBrowse link
G MCM3 minichromosome maintenance complex component 3 involved_in IEA TreeGrafter GO_REF:0000118 NCBI chr 6:51,816,615...51,837,404
Ensembl chr 6:53,085,231...53,105,344 		JBrowse link
G MCM4 minichromosome maintenance complex component 4 involved_in IEA TreeGrafter GO_REF:0000118 NCBI chr 8:44,387,529...44,404,773
Ensembl chr 8:41,778,247...41,794,783 		JBrowse link
G MCM5 minichromosome maintenance complex component 5 involved_in IEA TreeGrafter GO_REF:0000118 NCBI chr22:16,407,145...16,431,822
Ensembl chr22:34,249,831...34,274,423 		JBrowse link
G MCM6 minichromosome maintenance complex component 6 involved_in IEA TreeGrafter GO_REF:0000118 NCBI chr2B:23,986,278...24,023,045
Ensembl chr2B:139,911,909...139,947,687 		JBrowse link
G MCM7 minichromosome maintenance complex component 7 involved_in IEA TreeGrafter GO_REF:0000118 NCBI chr 7:92,128,037...92,136,976
Ensembl chr 7:105,561,591...105,570,720 		JBrowse link
G MUS81 MUS81 structure-specific endonuclease subunit involved_in IEA UniProt
TreeGrafter		 GO_REF:0000104 GO_REF:0000118 NCBI chr11:61,220,699...61,226,747
Ensembl chr11:64,549,840...64,555,875 		JBrowse link
double-strand break repair via classical nonhomologous end joining term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G BEND2 BEN domain containing 2 acts_upstream_of_or_within ISO (PMID:35613276) MGI PMID:35613276 NCBI chr  X:10,786,031...10,844,265
Ensembl chr  X:18,151,097...18,208,838 		JBrowse link
G ERCC6 ERCC excision repair 6, chromatin remodeling factor involved_in IEA Ensembl GO_REF:0000107 NCBI chr10:44,703,720...44,784,948 JBrowse link
G ERCC6L2 ERCC excision repair 6 like 2 involved_in ISO (PMID:32355287) UniProt PMID:32355287 NCBI chr 9:66,967,399...67,153,934
Ensembl chr 9:95,092,512...95,183,122 		JBrowse link
G ERCC8 ERCC excision repair 8, CSA ubiquitin ligase complex subunit involved_in IEA Ensembl GO_REF:0000107 NCBI chr 5:53,053,712...53,131,563
Ensembl chr 5:54,693,987...54,765,496 		JBrowse link
G LIG4 DNA ligase 4 involved_in IEA Ensembl GO_REF:0000107 NCBI chr13:89,336,434...89,347,418
Ensembl chr13:108,475,820...108,478,555 		JBrowse link
G RNF168 ring finger protein 168 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 3:193,814,785...193,848,620
Ensembl chr 3:203,756,589...203,790,687 		JBrowse link
G TOPBP1 DNA topoisomerase II binding protein 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 3:130,667,998...130,729,569
Ensembl chr 3:138,143,893...138,203,363 		JBrowse link
G TP53BP1 tumor protein p53 binding protein 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr15:22,364,696...22,472,499
Ensembl chr15:40,519,012...40,626,741 		JBrowse link
G UVRAG UV radiation resistance associated involved_in IEA Ensembl GO_REF:0000107 NCBI chr11:70,870,341...71,197,559
Ensembl chr11:74,172,919...74,496,046 		JBrowse link
G XRCC6 X-ray repair cross complementing 6 involved_in IEA Ensembl GO_REF:0000107 NCBI chr22:22,516,281...22,557,379
Ensembl chr22:40,603,038...40,643,314 		JBrowse link
G ZBTB7A zinc finger and BTB domain containing 7A involved_in IEA Ensembl GO_REF:0000107 NCBI chr19:3,066,554...3,090,285 JBrowse link
double-strand break repair via homologous recombination term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ANKLE1 ankyrin repeat and LEM domain containing 1 involved_in IEA TreeGrafter GO_REF:0000118 NCBI chr19:16,769,670...16,775,114
Ensembl chr19:17,744,570...17,750,070 		JBrowse link
G AP5S1 adaptor related protein complex 5 subunit sigma 1 involved_in IEA Ensembl
InterPro		 GO_REF:0000002 GO_REF:0000107 Ensembl chr20:3,659,526...3,664,347 JBrowse link
G AP5Z1 adaptor related protein complex 5 subunit zeta 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 7:5,027,987...5,044,215
Ensembl chr 7:5,068,846...5,085,087 		JBrowse link
G ASTE1 asteroid homolog 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 3:128,098,219...128,111,196
Ensembl chr 3:135,421,044...135,432,284 		JBrowse link
G ATM ATM serine/threonine kinase involved_in
acts_upstream_of_or_within		 IEA Ensembl GO_REF:0000107 NCBI chr11:103,109,979...103,256,405
Ensembl chr11:106,584,228...106,727,041 		JBrowse link
G AUNIP aurora kinase A and ninein interacting protein involved_in IEA Ensembl GO_REF:0000107 NCBI chr 1:25,090,690...25,118,062
Ensembl chr 1:26,157,953...26,185,578 		JBrowse link
G BLM BLM RecQ like helicase involved_in IEA Ensembl
TreeGrafter		 GO_REF:0000107 GO_REF:0000118 NCBI chr15:69,407,248...69,508,070
Ensembl chr15:88,607,157...88,707,864 		JBrowse link
G BRCA1 BRCA1 DNA repair associated involved_in IEA Ensembl
TreeGrafter		 GO_REF:0000107 GO_REF:0000118 NCBI chr17:14,197,946...14,279,064
Ensembl chr17:14,428,526...14,506,815 		JBrowse link
G BRCA2 BRCA2 DNA repair associated involved_in
acts_upstream_of_or_within		 IEA InterPro
Ensembl
TreeGrafter		 GO_REF:0000002 GO_REF:0000107 GO_REF:0000118 NCBI chr13:13,574,422...13,658,967
Ensembl chr13:32,010,066...32,091,332 		JBrowse link
G CHD4 chromodomain helicase DNA binding protein 4 involved_in IEA Ensembl GO_REF:0000107 NCBI chr12:6,701,004...6,738,621
Ensembl chr12:6,619,089...6,656,076 		JBrowse link
G DMC1 DNA meiotic recombinase 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr22:19,433,989...19,485,804
Ensembl chr22:37,253,609...37,305,769 		JBrowse link
G EPC1 enhancer of polycomb homolog 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr10:32,398,557...32,509,146
Ensembl chr10:32,985,456...33,095,070 		JBrowse link
G ERCC4 ERCC excision repair 4, endonuclease catalytic subunit involved_in IEA Ensembl
TreeGrafter		 GO_REF:0000107 GO_REF:0000118 NCBI chr16:12,848,334...12,880,480
Ensembl chr16:14,272,417...14,304,496 		JBrowse link
G ERCC5 ERCC excision repair 5, endonuclease involved_in ISO (PMID:26833090) UniProt PMID:26833090 NCBI chr13:84,005,950...84,036,710
Ensembl chr13:103,096,344...103,174,182 		JBrowse link
G EXD2 exonuclease 3'-5' domain containing 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chr14:49,783,072...49,835,645
Ensembl chr14:68,656,669...68,707,834 		JBrowse link
G FAN1 FANCD2 and FANCI associated nuclease 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr15:9,395,348...9,435,434
Ensembl chr15:28,433,749...28,473,211 		JBrowse link
G FBH1 F-box DNA helicase 1 involved_in IEA TreeGrafter GO_REF:0000118 NCBI chr10:5,931,389...5,978,844
Ensembl chr10:5,915,713...5,962,778 		JBrowse link
G GEN1 GEN1 Holliday junction 5' flap endonuclease involved_in IEA Ensembl GO_REF:0000107 NCBI chr2A:17,735,953...17,766,018
Ensembl chr2A:17,862,070...17,892,048 		JBrowse link
G HELQ helicase, POLQ like involved_in IEA Ensembl GO_REF:0000107 NCBI chr 4:40,740,392...40,788,907
Ensembl chr 4:46,586,882...46,635,108 		JBrowse link
G HTATSF1 HIV-1 Tat specific factor 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr  X:125,626,714...125,641,988
Ensembl chr  X:135,892,697...135,910,919 		JBrowse link
G HUS1 HUS1 checkpoint clamp component involved_in IEA Ensembl
TreeGrafter		 GO_REF:0000107 GO_REF:0000118 NCBI chr 7:48,606,848...48,622,194
Ensembl chr 7:48,714,668...48,731,005 		JBrowse link
G HUS1B HUS1 checkpoint clamp component B involved_in IEA TreeGrafter GO_REF:0000118 NCBI chr 6:466,508...469,590
Ensembl chr 6:601,288...602,124 		JBrowse link
G INIP INTS3 and NABP interacting protein involved_in IEA Ensembl GO_REF:0000107 NCBI chr 9:83,811,378...83,845,638
Ensembl chr 9:111,965,947...111,999,561 		JBrowse link
G INO80 INO80 complex ATPase subunit involved_in IEA Ensembl GO_REF:0000107 NCBI chr15:19,920,980...20,058,117
Ensembl chr15:38,170,982...38,307,311 		JBrowse link
G INTS3 integrator complex subunit 3 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 1:129,084,681...129,130,669
Ensembl chr 1:132,714,200...132,759,842 		JBrowse link
G KASH5 KASH domain containing 5 acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr19:46,402,586...46,432,002
Ensembl chr19:55,325,640...55,353,721 		JBrowse link
G KAT5 lysine acetyltransferase 5 involved_in IEA Ensembl
TreeGrafter		 GO_REF:0000107 GO_REF:0000118 NCBI chr11:61,071,118...61,078,667
Ensembl chr11:64,404,572...64,412,667 		JBrowse link
G KDM4D lysine demethylase 4D acts_upstream_of_or_within ISO (PMID:24550317) MGI PMID:24550317 NCBI chr11:89,987,537...90,013,421 JBrowse link
G LOC100972985 meiosis specific with OB-fold involved_in ISO (PMID:24068956), (PMID:24240703) UniProt PMID:24068956 PMID:24240703 NCBI chr16:835,420...874,178 JBrowse link
G LOC100994157 histone H2AX acts_upstream_of_or_within ISO (PMID:11934988) MGI PMID:11934988 NCBI chr11:113,932,078...113,933,679 JBrowse link
G MBTD1 mbt domain containing 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr17:45,267,275...45,350,751
Ensembl chr17:50,137,395...50,215,078 		JBrowse link
G MCM8 minichromosome maintenance 8 homologous recombination repair factor involved_in IEA Ensembl
TreeGrafter		 GO_REF:0000107 GO_REF:0000118 NCBI chr20:5,945,034...5,993,725
Ensembl chr20:5,729,174...5,775,133 		JBrowse link
G MCM9 minichromosome maintenance 9 homologous recombination repair factor involved_in IEA Ensembl
TreeGrafter		 GO_REF:0000107 GO_REF:0000118 NCBI chr 6:116,620,188...116,743,435
Ensembl chr 6:120,763,329...120,881,865 		JBrowse link
G MMS22L MMS22 like, DNA repair protein involved_in IEA InterPro
TreeGrafter
Ensembl		 GO_REF:0000002 GO_REF:0000107 GO_REF:0000118 NCBI chr 6:94,989,906...95,127,260
Ensembl chr 6:98,861,299...99,011,773 		JBrowse link
G MORF4L1 mortality factor 4 like 1 involved_in ISO (PMID:20332121) UniProt PMID:20332121 NCBI chr15:57,844,220...57,869,139
Ensembl chr15:76,772,007...76,829,259 		JBrowse link
G MRE11 MRE11 homolog, double strand break repair nuclease involved_in IEA Ensembl
TreeGrafter		 GO_REF:0000107 GO_REF:0000118 NCBI chr11:89,418,537...89,500,705
Ensembl chr11:92,918,549...92,985,966 		JBrowse link
G NABP1 nucleic acid binding protein 1 involved_in IEA Ensembl
TreeGrafter		 GO_REF:0000107 GO_REF:0000118 NCBI chr2B:78,980,156...78,989,309
Ensembl chr2B:196,895,166...196,903,977 		JBrowse link
G NABP2 nucleic acid binding protein 2 involved_in IEA Ensembl
TreeGrafter		 GO_REF:0000107 GO_REF:0000118 NCBI chr12:32,685,521...32,693,318
Ensembl chr12:32,937,017...32,944,754 		JBrowse link
G NBN nibrin involved_in IEA Ensembl
TreeGrafter		 GO_REF:0000107 GO_REF:0000118 NCBI chr 8:86,622,797...86,674,202
Ensembl chr 8:88,575,198...88,626,307 		JBrowse link
G NSMCE1 NSE1 homolog, SMC5-SMC6 complex component involved_in IEA TreeGrafter GO_REF:0000118 Ensembl chr16:27,598,382...27,642,488 JBrowse link
G NSMCE2 NSE2 (MMS21) homolog, SMC5-SMC6 complex SUMO ligase involved_in IEA InterPro
TreeGrafter
Ensembl		 GO_REF:0000002 GO_REF:0000107 GO_REF:0000118 NCBI chr 8:121,777,986...122,052,094
Ensembl chr 8:124,529,268...124,803,114 		JBrowse link
G NUCKS1 nuclear casein kinase and cyclin dependent kinase substrate 1 involved_in IEA Ensembl
TreeGrafter		 GO_REF:0000107 GO_REF:0000118 NCBI chr 1:181,322,760...181,359,321
Ensembl chr 1:185,606,796...185,642,984 		JBrowse link
G PALB2 partner and localizer of BRCA2 involved_in IEA Ensembl
TreeGrafter
InterPro		 GO_REF:0000002 GO_REF:0000107 GO_REF:0000118 NCBI chr16:14,470,367...14,507,841
Ensembl chr16:23,855,535...23,892,117 		JBrowse link
G POGZ pogo transposable element derived with ZNF domain acts_upstream_of_or_within_positive_effect IEA Ensembl GO_REF:0000107 NCBI chr 1:126,761,777...126,818,262
Ensembl chr 1:130,407,426...130,463,909 		JBrowse link
G POLL DNA polymerase lambda involved_in IEA Ensembl GO_REF:0000107 NCBI chr10:98,181,049...98,190,463
Ensembl chr10:101,653,978...101,663,360 		JBrowse link
G POLN DNA polymerase nu involved_in IEA Ensembl GO_REF:0000107 NCBI chr 4:2,214,154...2,385,094
Ensembl chr 4:2,122,309...2,292,431 		JBrowse link
G PSMD14 proteasome 26S subunit, non-ATPase 14 involved_in IEA Ensembl GO_REF:0000107 NCBI chr2B:48,602,395...48,705,229
Ensembl chr2B:165,972,229...166,074,879 		JBrowse link
G RAD21L1 RAD21 cohesin complex component like 1 acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr20:1,385,935...1,413,301
Ensembl chr20:1,153,384...1,231,383 		JBrowse link
G RAD50 RAD50 double strand break repair protein involved_in IEA Ensembl GO_REF:0000107 NCBI chr 5:127,972,630...128,059,911
Ensembl chr 5:134,134,495...134,222,261 		JBrowse link
G RAD51 RAD51 recombinase acts_upstream_of_or_within
involved_in		 ISO
IEA		 RGD
Ensembl
InterPro		 PMID:14755242 GO_REF:0000002 GO_REF:0000107 RGD:9831188 NCBI chr15:19,638,310...19,672,474
Ensembl chr15:37,891,056...37,925,207 		JBrowse link
G RAD51AP1 RAD51 associated protein 1 involved_in IEA Ensembl
TreeGrafter		 GO_REF:0000107 GO_REF:0000118 NCBI chr12:4,657,972...4,679,232
Ensembl chr12:4,578,621...4,599,879 		JBrowse link
G RAD51B RAD51 paralog B involved_in IEA InterPro
TreeGrafter		 GO_REF:0000002 GO_REF:0000118 NCBI chr14:48,399,345...49,314,577
Ensembl chr14:67,281,148...68,110,693 		JBrowse link
G RAD51C RAD51 paralog C involved_in IEA Ensembl GO_REF:0000107 NCBI chr17:52,769,446...52,808,467
Ensembl chr17:57,621,552...57,660,701 		JBrowse link
G RAD51D RAD51 paralog D involved_in IEA Ensembl
TreeGrafter		 GO_REF:0000107 GO_REF:0000118 NCBI chr17:21,666,236...21,693,886
Ensembl chr17:21,958,212...21,978,406 		JBrowse link
G RAD52 RAD52 homolog, DNA repair protein involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:12379650) InterPro
TreeGrafter
MGI		 PMID:12379650 GO_REF:0000002 GO_REF:0000118 NCBI chr12:986,372...1,066,708
Ensembl chr12:946,825...985,668 		JBrowse link
G RAD54B RAD54 homolog B involved_in
acts_upstream_of_or_within		 IEA TreeGrafter
Ensembl		 GO_REF:0000107 GO_REF:0000118 NCBI chr 8:90,995,229...91,098,149
Ensembl chr 8:92,939,535...93,034,060 		JBrowse link
G RAD54L RAD54 like acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr 1:45,549,586...45,581,711
Ensembl chr 1:46,905,598...46,936,259 		JBrowse link
G RBBP8 RB binding protein 8, endonuclease involved_in IEA Ensembl GO_REF:0000107 NCBI chr18:16,181,652...16,274,597
Ensembl chr18:19,811,989...19,903,522 		JBrowse link
G REC8 REC8 meiotic recombination protein acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr14:4,948,100...4,956,492
Ensembl chr14:23,071,724...23,079,948 		JBrowse link
G RECQL RecQ like helicase involved_in IEA TreeGrafter GO_REF:0000118 NCBI chr12:64,796,383...64,829,165
Ensembl chr12:67,400,315...67,432,724 		JBrowse link
G RECQL4 RecQ like helicase 4 involved_in IEA TreeGrafter GO_REF:0000118 Ensembl chr 8:144,267,101...144,276,985 JBrowse link
G RECQL5 RecQ like helicase 5 involved_in IEA TreeGrafter GO_REF:0000118 NCBI chr17:69,577,778...69,618,068
Ensembl chr17:75,128,325...75,168,254 		JBrowse link
G REV3L REV3 like, DNA directed polymerase zeta catalytic subunit involved_in IEA TreeGrafter GO_REF:0000118 NCBI chr 6:109,104,341...109,291,268
Ensembl chr 6:113,181,759...113,367,625 		JBrowse link
G RFWD3 ring finger and WD repeat domain 3 involved_in IEA Ensembl GO_REF:0000107 NCBI chr16:55,187,178...55,233,265
Ensembl chr16:74,541,450...74,586,951 		JBrowse link
G RMI1 RecQ mediated genome instability 1 involved_in IEA Ensembl
TreeGrafter		 GO_REF:0000107 GO_REF:0000118 NCBI chr 9:40,875,290...40,898,613
Ensembl chr 9:83,356,786...83,358,663 		JBrowse link
G RMI2 RecQ mediated genome instability 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chr16:10,286,136...10,292,377
Ensembl chr16:11,480,066...11,513,561 		JBrowse link
G RNF138 ring finger protein 138 involved_in IEA TreeGrafter GO_REF:0000118 NCBI chr18:25,300,480...25,340,010 JBrowse link
G RNF138 ring finger protein 138 involved_in IEA TreeGrafter GO_REF:0000118 Ensembl chr18:28,897,138...28,932,652 JBrowse link
G RNF169 ring finger protein 169 involved_in IEA Ensembl GO_REF:0000107 NCBI chr11:69,821,842...69,909,297
Ensembl chr11:73,126,127...73,207,340 		JBrowse link
G RPA1 replication protein A1 involved_in
acts_upstream_of_or_within		 IEA Ensembl GO_REF:0000107 NCBI chr17:1,813,610...1,886,093
Ensembl chr17:1,705,380...1,775,596 		JBrowse link
G RPA2 replication protein A2 involved_in IEA Ensembl
TreeGrafter		 GO_REF:0000107 GO_REF:0000118 NCBI chr 1:27,151,784...27,175,110
Ensembl chr 1:28,191,731...28,214,666 		JBrowse link
G RPA3 replication protein A3 involved_in IEA Ensembl
TreeGrafter		 GO_REF:0000107 GO_REF:0000118 NCBI chr 7:8,361,623...8,365,098
Ensembl chr 7:7,713,629...7,717,169 		JBrowse link
G SAMHD1 SAM and HD domain containing deoxynucleoside triphosphate triphosphohydrolase 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr20:33,224,200...33,282,018
Ensembl chr20:34,341,367...34,398,314 		JBrowse link
G SEM1 SEM1, 26S proteasome complex subunit acts_upstream_of_or_within
involved_in		 ISO
IEA		 (PMID:15359272) MGI
TreeGrafter		 PMID:15359272 GO_REF:0000118 NCBI chr 7:88,647,366...88,668,476 JBrowse link
G SFPQ splicing factor proline and glutamine rich acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr 1:34,444,105...34,461,012
Ensembl chr 1:35,632,917...35,641,551 		JBrowse link
G SFR1 SWI5 dependent homologous recombination repair protein 1 involved_in IEA InterPro
TreeGrafter
Ensembl		 GO_REF:0000002 GO_REF:0000107 GO_REF:0000118 NCBI chr10:100,721,780...100,726,204
Ensembl chr10:104,180,672...104,184,880 		JBrowse link
G SLX1A SLX1 homolog A, structure-specific endonuclease subunit involved_in IEA TreeGrafter GO_REF:0000118
G SLX4 SLX4 structure-specific endonuclease subunit involved_in IEA Ensembl GO_REF:0000107 NCBI chr16:2,502,334...2,532,172
Ensembl chr16:3,678,018...3,707,842 		JBrowse link
G SMC5 structural maintenance of chromosomes 5 involved_in IEA TreeGrafter GO_REF:0000118 NCBI chr 9:54,446,863...54,543,249 JBrowse link
G SMC6 structural maintenance of chromosomes 6 involved_in IEA TreeGrafter GO_REF:0000118 NCBI chr2A:17,648,371...17,735,910
Ensembl chr2A:17,776,276...17,854,052 		JBrowse link
G SPIDR scaffold protein involved in DNA repair involved_in IEA Ensembl
TreeGrafter		 GO_REF:0000107 GO_REF:0000118 NCBI chr 8:43,691,454...44,166,259
Ensembl chr 8:41,083,964...41,558,170 		JBrowse link
G SWI5 SWI5 homologous recombination repair protein involved_in IEA TreeGrafter GO_REF:0000118 NCBI chr 9:99,396,439...99,410,054
Ensembl chr 9:128,064,569...128,078,380 		JBrowse link
G SWSAP1 SWIM-type zinc finger 7 associated protein 1 involved_in IEA TreeGrafter GO_REF:0000118 NCBI chr19:10,920,774...10,923,769
Ensembl chr19:11,632,682...11,634,202 		JBrowse link
G TONSL tonsoku like, DNA repair protein involved_in IEA Ensembl
TreeGrafter		 GO_REF:0000107 GO_REF:0000118 NCBI chr 8:141,195,959...141,211,849
Ensembl chr 8:144,185,674...144,201,040 		JBrowse link
G TOP3A DNA topoisomerase III alpha involved_in IEA Ensembl GO_REF:0000107 NCBI chr17:32,814,448...32,858,076
Ensembl chr17:37,897,037...37,936,135 		JBrowse link
G TOPBP1 DNA topoisomerase II binding protein 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 3:130,667,998...130,729,569
Ensembl chr 3:138,143,893...138,203,363 		JBrowse link
G UBE2N ubiquitin conjugating enzyme E2 N acts_upstream_of ISO (PMID:17349954) HGNC-UCL PMID:17349954 NCBI chr12:90,951,446...90,984,075 JBrowse link
G WDR48 WD repeat domain 48 involved_in
acts_upstream_of_or_within		 IEA TreeGrafter
Ensembl		 GO_REF:0000107 GO_REF:0000118 NCBI chr 3:38,948,440...38,992,872
Ensembl chr 3:39,228,920...39,273,300 		JBrowse link
G WRN WRN RecQ like helicase involved_in IEA TreeGrafter GO_REF:0000118 NCBI chr 8:30,353,643...30,492,978
Ensembl chr 8:27,541,145...27,679,855 		JBrowse link
G XRCC2 X-ray repair cross complementing 2 involved_in
acts_upstream_of_or_within		 IEA InterPro
Ensembl
TreeGrafter		 GO_REF:0000002 GO_REF:0000107 GO_REF:0000118 NCBI chr 7:144,229,031...144,256,854
Ensembl chr 7:156,378,685...156,406,516 		JBrowse link
G XRCC3 X-ray repair cross complementing 3 involved_in IEA Ensembl GO_REF:0000107 NCBI chr14:84,323,644...84,341,763
Ensembl chr14:104,131,903...104,149,037 		JBrowse link
G YY1 YY1 transcription factor involved_in ISO (PMID:18026119) UniProt PMID:18026119 NCBI chr14:80,859,491...80,903,651 JBrowse link
G ZFYVE26 zinc finger FYVE-type containing 26 involved_in IEA InterPro
Ensembl		 GO_REF:0000002 GO_REF:0000107 NCBI chr14:48,326,517...48,396,486
Ensembl chr14:67,206,236...67,273,580 		JBrowse link
G ZMYND8 zinc finger MYND-type containing 8 involved_in IEA Ensembl GO_REF:0000107 NCBI chr20:43,540,819...43,701,322
Ensembl chr20:44,624,487...44,772,032 		JBrowse link
double-strand break repair via nonhomologous end joining term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G APLF aprataxin and PNKP like factor involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:21211721) Ensembl
MGI		 PMID:21211721 GO_REF:0000107 NCBI chr2A:68,509,314...68,629,192
Ensembl chr2A:69,632,459...69,744,611 		JBrowse link
G ASTE1 asteroid homolog 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 3:128,098,219...128,111,196
Ensembl chr 3:135,421,044...135,432,284 		JBrowse link
G CYREN cell cycle regulator of NHEJ involved_in ISO (PMID:30017584)
(PMID:24610814)		 DisProt
UniProt		 PMID:24610814 PMID:30017584 NCBI chr 7:127,130,587...127,148,824 JBrowse link
G DCLRE1A DNA cross-link repair 1A involved_in IEA TreeGrafter GO_REF:0000118 NCBI chr10:110,433,735...110,453,565
Ensembl chr10:113,866,759...113,886,141 		JBrowse link
G DCLRE1B DNA cross-link repair 1B involved_in IEA TreeGrafter GO_REF:0000118 NCBI chr 1:88,643,664...88,651,962
Ensembl chr 1:123,692,915...123,701,403 		JBrowse link
G DCLRE1C DNA cross-link repair 1C involved_in IEA TreeGrafter GO_REF:0000118 NCBI chr10:14,901,335...14,956,947
Ensembl chr10:15,236,558...15,269,043 		JBrowse link
G DNTT DNA nucleotidylexotransferase involved_in IEA TreeGrafter GO_REF:0000118 NCBI chr10:92,916,783...92,958,216
Ensembl chr10:96,423,819...96,457,742 		JBrowse link
G ERCC1 ERCC excision repair 1, endonuclease non-catalytic subunit involved_in IEA Ensembl GO_REF:0000107 NCBI chr19:42,356,039...42,427,754
Ensembl chr19:50,951,674...50,968,430 		JBrowse link
G ERCC4 ERCC excision repair 4, endonuclease catalytic subunit involved_in IEA Ensembl GO_REF:0000107 NCBI chr16:12,848,334...12,880,480
Ensembl chr16:14,272,417...14,304,496 		JBrowse link
G HMGB1 high mobility group box 1 involved_in ISO (PMID:9600082) GO_Central PMID:9600082 NCBI chr13:11,737,942...11,894,923
Ensembl chr13:30,174,899...30,179,527 		JBrowse link
G HMGB2 high mobility group box 2 involved_in ISO (PMID:9600082) GO_Central PMID:9600082 NCBI chr 4:165,559,848...165,562,625
Ensembl chr 4:177,797,457...177,800,952 		JBrowse link
G IFFO1 intermediate filament family orphan 1 involved_in ISO (PMID:31548606) UniProt PMID:31548606 NCBI chr12:6,670,415...6,686,972
Ensembl chr12:6,588,975...6,605,262 		JBrowse link
G KDM2A lysine demethylase 2A involved_in IEA Ensembl GO_REF:0000107 NCBI chr11:62,470,549...62,616,135
Ensembl chr11:65,793,464...65,930,498 		JBrowse link
G LIG1 DNA ligase 1 acts_upstream_of_or_within ISO (PMID:21655080) MGI PMID:21655080 NCBI chr19:45,056,737...45,110,867
Ensembl chr19:53,706,778...53,761,088 		JBrowse link
G LIG3 DNA ligase 3 acts_upstream_of_or_within ISO (PMID:21655080) MGI PMID:21655080 NCBI chr17:21,776,483...21,805,706
Ensembl chr17:22,074,046...22,095,220 		JBrowse link
G LIG4 DNA ligase 4 involved_in
acts_upstream_of_or_within		 IEA TreeGrafter
Ensembl		 GO_REF:0000107 GO_REF:0000118 NCBI chr13:89,336,434...89,347,418
Ensembl chr13:108,475,820...108,478,555 		JBrowse link
G LOC100970335 X-ray repair cross-complementing protein 6-like involved_in IEA InterPro
TreeGrafter		 GO_REF:0000002 GO_REF:0000118 NCBI chr  X:139,876,341...139,878,314 JBrowse link
G LOC100986203 histone-lysine N-methyltransferase SETMAR involved_in IEA Ensembl
TreeGrafter		 GO_REF:0000107 GO_REF:0000118 NCBI chr 3:4,256,539...4,271,593
Ensembl chr 3:4,357,890...4,371,791 		JBrowse link
G MLH1 mutL homolog 1 acts_upstream_of_or_within ISO (PMID:15084308) MGI PMID:15084308 NCBI chr 3:36,899,828...36,957,076
Ensembl chr 3:37,189,439...37,245,801 		JBrowse link
G MRE11 MRE11 homolog, double strand break repair nuclease involved_in IEA Ensembl
TreeGrafter		 GO_REF:0000107 GO_REF:0000118 NCBI chr11:89,418,537...89,500,705
Ensembl chr11:92,918,549...92,985,966 		JBrowse link
G NHEJ1 non-homologous end joining factor 1 involved_in IEA Ensembl
TreeGrafter
UniProt		 GO_REF:0000107 GO_REF:0000117 GO_REF:0000118 NCBI chr2B:106,326,596...106,419,928
Ensembl chr2B:224,926,183...225,008,788 		JBrowse link
G NSMCE2 NSE2 (MMS21) homolog, SMC5-SMC6 complex SUMO ligase NOT|involved_in ISO (PMID:16810316) UniProt PMID:16810316 NCBI chr 8:121,777,986...122,052,094
Ensembl chr 8:124,529,268...124,803,114 		JBrowse link
G PARP3 poly(ADP-ribose) polymerase family member 3 acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr 3:51,883,695...51,890,266
Ensembl chr 3:53,112,494...53,119,053 		JBrowse link
G PAXX PAXX non-homologous end joining factor involved_in IEA InterPro
TreeGrafter
Ensembl		 GO_REF:0000002 GO_REF:0000107 GO_REF:0000118 NCBI chr 9:108,052,793...108,055,298
Ensembl chr 9:137,021,230...137,022,805 		JBrowse link
G PNKP polynucleotide kinase 3'-phosphatase involved_in IEA Ensembl GO_REF:0000107 NCBI chr19:46,874,216...46,880,954
Ensembl chr19:55,790,048...55,796,762 		JBrowse link
G POLA1 DNA polymerase alpha 1, catalytic subunit involved_in ISO (PMID:11470886) UniProt PMID:11470886 NCBI chr  X:17,290,805...17,592,163
Ensembl chr  X:24,657,878...24,960,231 		JBrowse link
G POLB DNA polymerase beta involved_in IEA TreeGrafter GO_REF:0000118 NCBI chr 8:41,582,370...41,615,950
Ensembl chr 8:39,026,991...39,060,464 		JBrowse link
G POLL DNA polymerase lambda involved_in IEA Ensembl
TreeGrafter		 GO_REF:0000107 GO_REF:0000118 NCBI chr10:98,181,049...98,190,463
Ensembl chr10:101,653,978...101,663,360 		JBrowse link
G POLM DNA polymerase mu involved_in IEA TreeGrafter GO_REF:0000118 NCBI chr 7:44,785,797...44,796,624
Ensembl chr 7:44,852,594...44,862,816 		JBrowse link
G PRKDC protein kinase, DNA-activated, catalytic subunit involved_in
acts_upstream_of_or_within		 IEA InterPro
Ensembl		 GO_REF:0000002 GO_REF:0000107 NCBI chr 8:44,201,391...44,386,803
Ensembl chr 8:41,593,029...41,778,299 		JBrowse link
G PRPF19 pre-mRNA processing factor 19 involved_in IEA Ensembl GO_REF:0000107 NCBI chr11:56,153,965...56,169,821
Ensembl chr11:59,595,120...59,607,828 		JBrowse link
G PSMD14 proteasome 26S subunit, non-ATPase 14 involved_in IEA Ensembl GO_REF:0000107 NCBI chr2B:48,602,395...48,705,229
Ensembl chr2B:165,972,229...166,074,879 		JBrowse link
G RNF168 ring finger protein 168 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 3:193,814,785...193,848,620
Ensembl chr 3:203,756,589...203,790,687 		JBrowse link
G RNF8 ring finger protein 8 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 6:36,918,705...36,955,380
Ensembl chr 6:38,108,414...38,145,949 		JBrowse link
G SMARCAL1 SNF2 related chromatin remodeling annealing helicase 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr2B:103,672,934...103,743,802
Ensembl chr2B:222,276,353...222,347,258 		JBrowse link
G SMC5 structural maintenance of chromosomes 5 NOT|involved_in ISO (PMID:16810316) UniProt PMID:16810316 NCBI chr 9:54,446,863...54,543,249 JBrowse link
G TP53BP1 tumor protein p53 binding protein 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr15:22,364,696...22,472,499
Ensembl chr15:40,519,012...40,626,741 		JBrowse link
G XRCC1 X-ray repair cross complementing 1 involved_in IEA Ensembl
InterPro		 GO_REF:0000002 GO_REF:0000107 NCBI chr19:40,485,052...40,522,188
Ensembl chr19:49,094,014...49,125,520 		JBrowse link
G XRCC4 X-ray repair cross complementing 4 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:17713479) Ensembl
TreeGrafter
MGI
UniProt		 PMID:17713479 GO_REF:0000107 GO_REF:0000117 GO_REF:0000118 NCBI chr 5:31,927,463...32,202,394
Ensembl chr 5:32,246,320...32,521,490 		JBrowse link
G XRCC5 X-ray repair cross complementing 5 involved_in IEA InterPro
TreeGrafter
Ensembl		 GO_REF:0000002 GO_REF:0000107 GO_REF:0000118 NCBI chr2B:103,371,459...103,468,419
Ensembl chr2B:221,972,742...222,071,235 		JBrowse link
G XRCC6 X-ray repair cross complementing 6 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:11751629) Ensembl
TreeGrafter
MGI
InterPro		 PMID:11751629 GO_REF:0000002 GO_REF:0000107 GO_REF:0000118 NCBI chr22:22,516,281...22,557,379
Ensembl chr22:40,603,038...40,643,314 		JBrowse link
double-strand break repair via single-strand annealing term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G RAD52 RAD52 homolog, DNA repair protein involved_in IEA InterPro
TreeGrafter		 GO_REF:0000002 GO_REF:0000118 NCBI chr12:986,372...1,066,708
Ensembl chr12:946,825...985,668 		JBrowse link
double-strand break repair via synthesis-dependent strand annealing term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G FANCM FA complementation group M involved_in IEA TreeGrafter GO_REF:0000118 NCBI chr14:25,752,295...25,817,001
Ensembl chr14:44,080,146...44,143,958 		JBrowse link
G HELQ helicase, POLQ like involved_in IEA Ensembl GO_REF:0000107 NCBI chr 4:40,740,392...40,788,907
Ensembl chr 4:46,586,882...46,635,108 		JBrowse link
G RAD54L RAD54 like involved_in IEA TreeGrafter GO_REF:0000118 NCBI chr 1:45,549,586...45,581,711
Ensembl chr 1:46,905,598...46,936,259 		JBrowse link
G XRCC3 X-ray repair cross complementing 3 involved_in IEA TreeGrafter GO_REF:0000118 NCBI chr14:84,323,644...84,341,763
Ensembl chr14:104,131,903...104,149,037 		JBrowse link
error-free postreplication DNA repair term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G UBE2V1 ubiquitin conjugating enzyme E2 V1 acts_upstream_of_or_within ISO (PMID:11406273) MGI PMID:11406273 NCBI chr20:46,422,383...46,457,295
Ensembl chr20:47,539,899...47,574,328 		JBrowse link
G UBE2V2 ubiquitin conjugating enzyme E2 V2 acts_upstream_of_or_within ISO (PMID:11406273) MGI PMID:11406273 NCBI chr 8:44,435,496...44,488,517
Ensembl chr 8:41,856,429...41,878,320 		JBrowse link
error-free translesion synthesis term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G POLD1 DNA polymerase delta 1, catalytic subunit involved_in IEA Ensembl GO_REF:0000107 NCBI chr19:47,347,919...47,381,772
Ensembl chr19:56,251,356...56,297,611 		JBrowse link
G POLDIP2 DNA polymerase delta interacting protein 2 involved_in IEA Ensembl
TreeGrafter		 GO_REF:0000107 GO_REF:0000118 NCBI chr17:28,416,912...28,427,280
Ensembl chr17:28,919,371...28,928,682 		JBrowse link
G REV1 REV1 DNA directed polymerase involved_in IEA TreeGrafter GO_REF:0000118 NCBI chr2A:99,808,519...99,897,989
Ensembl chr2A:100,329,475...100,418,678 		JBrowse link
error-prone translesion synthesis term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G MAD2L2 mitotic arrest deficient 2 like 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 1:10,436,532...10,454,023
Ensembl chr 1:11,654,963...11,661,526 		JBrowse link
G POLD2 DNA polymerase delta 2, accessory subunit involved_in IEA Ensembl GO_REF:0000107 NCBI chr 7:44,829,040...44,837,928
Ensembl chr 7:44,896,320...44,905,393 		JBrowse link
G POLD3 DNA polymerase delta 3, accessory subunit involved_in IEA Ensembl GO_REF:0000107 NCBI chr11:69,665,642...69,715,879
Ensembl chr11:72,969,844...73,018,295 		JBrowse link
G POLE2 DNA polymerase epsilon 2, accessory subunit involved_in IEA TreeGrafter GO_REF:0000118 NCBI chr14:30,222,957...30,268,455
Ensembl chr14:48,531,945...48,576,700 		JBrowse link
G POLH DNA polymerase eta involved_in IEA TreeGrafter GO_REF:0000118 NCBI chr 6:43,168,195...43,205,811
Ensembl chr 6:44,462,225...44,495,704 		JBrowse link
G POLK DNA polymerase kappa involved_in IEA Ensembl
TreeGrafter		 GO_REF:0000107 GO_REF:0000118 NCBI chr 5:39,700,659...39,788,727
Ensembl chr 5:40,311,526...40,401,003 		JBrowse link
G POLQ DNA polymerase theta involved_in IEA Ensembl GO_REF:0000107 NCBI chr 3:118,535,968...118,648,275
Ensembl chr 3:125,446,829...125,559,283 		JBrowse link
G PRIMPOL primase and DNA directed polymerase involved_in IEA InterPro GO_REF:0000002 NCBI chr 4:176,815,122...176,860,682 JBrowse link
G REV1 REV1 DNA directed polymerase involved_in
acts_upstream_of_or_within		 IEA InterPro
Ensembl
TreeGrafter		 GO_REF:0000002 GO_REF:0000107 GO_REF:0000118 NCBI chr2A:99,808,519...99,897,989
Ensembl chr2A:100,329,475...100,418,678 		JBrowse link
G REV3L REV3 like, DNA directed polymerase zeta catalytic subunit involved_in IEA Ensembl
TreeGrafter		 GO_REF:0000107 GO_REF:0000118 NCBI chr 6:109,104,341...109,291,268
Ensembl chr 6:113,181,759...113,367,625 		JBrowse link
interstrand cross-link repair term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G CENPS centromere protein S involved_in ISO (PMID:20347429) ComplexPortal PMID:20347429 NCBI chr 1:9,190,303...9,211,812 JBrowse link
G CENPX centromere protein X involved_in ISO (PMID:20347429) ComplexPortal PMID:20347429 NCBI chr17:76,423,317...76,427,577
Ensembl chr17:82,128,636...82,132,831 		JBrowse link
G DCLRE1A DNA cross-link repair 1A involved_in IEA TreeGrafter GO_REF:0000118 NCBI chr10:110,433,735...110,453,565
Ensembl chr10:113,866,759...113,886,141 		JBrowse link
G DCLRE1B DNA cross-link repair 1B involved_in IEA Ensembl
TreeGrafter		 GO_REF:0000107 GO_REF:0000118 NCBI chr 1:88,643,664...88,651,962
Ensembl chr 1:123,692,915...123,701,403 		JBrowse link
G DCLRE1C DNA cross-link repair 1C involved_in IEA TreeGrafter GO_REF:0000118 NCBI chr10:14,901,335...14,956,947
Ensembl chr10:15,236,558...15,269,043 		JBrowse link
G ERCC1 ERCC excision repair 1, endonuclease non-catalytic subunit acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr19:42,356,039...42,427,754
Ensembl chr19:50,951,674...50,968,430 		JBrowse link
G ERCC6L2 ERCC excision repair 6 like 2 involved_in ISO (PMID:24507776) UniProt PMID:24507776 NCBI chr 9:66,967,399...67,153,934
Ensembl chr 9:95,092,512...95,183,122 		JBrowse link
G EXO5 exonuclease 5 involved_in ISO (PMID:23095756) UniProt PMID:23095756 NCBI chr 1:39,798,164...39,805,509 JBrowse link
G FAAP100 FA core complex associated protein 100 involved_in IEA InterPro GO_REF:0000002 NCBI chr17:75,995,994...76,008,255
Ensembl chr17:81,697,543...81,709,438 		JBrowse link
G FAAP20 FA core complex associated protein 20 involved_in ISO (PMID:22266823), (PMID:22396592), (PMID:22705371) UniProt PMID:22266823 PMID:22396592 PMID:22705371 NCBI chr 1:900,616...922,845 JBrowse link
G FAAP24 FA core complex associated protein 24 involved_in IEA InterPro
Ensembl		 GO_REF:0000002 GO_REF:0000107 NCBI chr19:29,895,258...29,900,531
Ensembl chr19:38,639,167...38,644,143 		JBrowse link
G FAN1 FANCD2 and FANCI associated nuclease 1 involved_in IEA InterPro
TreeGrafter
Ensembl		 GO_REF:0000002 GO_REF:0000107 GO_REF:0000118 NCBI chr15:9,395,348...9,435,434
Ensembl chr15:28,433,749...28,473,211 		JBrowse link
G FANCA FA complementation group A involved_in IEA InterPro GO_REF:0000002 NCBI chr16:70,495,310...70,579,275
Ensembl chr16:90,163,950...90,245,147 		JBrowse link
G FANCB FA complementation group B involved_in IEA InterPro GO_REF:0000002 NCBI chr  X:7,470,574...7,500,958
Ensembl chr  X:14,752,934...14,781,817 		JBrowse link
G FANCC FA complementation group C involved_in IEA InterPro GO_REF:0000002 NCBI chr 9:66,201,581...66,418,229
Ensembl chr 9:94,329,971...94,477,198 		JBrowse link
G FANCD2 FA complementation group D2 involved_in IEA TreeGrafter GO_REF:0000118 NCBI chr 3:9,932,292...10,037,332
Ensembl chr 3:10,312,476...10,389,190 		JBrowse link
G FANCE FA complementation group E involved_in IEA InterPro GO_REF:0000002 NCBI chr 6:35,012,076...35,027,018 JBrowse link
G FANCF FA complementation group F involved_in IEA InterPro GO_REF:0000002 NCBI chr11:22,634,301...22,637,885
Ensembl chr11:22,544,052...22,545,176 		JBrowse link
G FANCG FA complementation group G involved_in IEA InterPro GO_REF:0000002 NCBI chr 9:34,924,399...34,931,077
Ensembl chr 9:35,730,176...35,736,648 		JBrowse link
G FANCL FA complementation group L involved_in IEA InterPro GO_REF:0000002 NCBI chr2A:58,270,620...58,353,001
Ensembl chr2A:59,418,265...59,499,496 		JBrowse link
G FANCM FA complementation group M involved_in IEA Ensembl
TreeGrafter		 GO_REF:0000107 GO_REF:0000118 NCBI chr14:25,752,295...25,817,001
Ensembl chr14:44,080,146...44,143,958 		JBrowse link
G FIRRM FIGNL1 interacting regulator of recombination and mitosis involved_in IEA Ensembl GO_REF:0000107 NCBI chr 1:145,277,657...145,340,329
Ensembl chr 1:148,999,127...149,057,553 		JBrowse link
G HMCES 5-hydroxymethylcytosine binding, ES cell specific involved_in IEA Ensembl GO_REF:0000107 NCBI chr 3:126,339,758...126,367,166
Ensembl chr 3:133,694,676...133,721,519 		JBrowse link
G HROB homologous recombination factor with OB-fold involved_in IEA Ensembl GO_REF:0000107 NCBI chr17:13,233,464...13,254,726
Ensembl chr17:13,395,473...13,409,505 		JBrowse link
G NUCKS1 nuclear casein kinase and cyclin dependent kinase substrate 1 involved_in IEA Ensembl
TreeGrafter		 GO_REF:0000107 GO_REF:0000118 NCBI chr 1:181,322,760...181,359,321
Ensembl chr 1:185,606,796...185,642,984 		JBrowse link
G POLN DNA polymerase nu involved_in IEA Ensembl GO_REF:0000107 NCBI chr 4:2,214,154...2,385,094
Ensembl chr 4:2,122,309...2,292,431 		JBrowse link
G RAD51 RAD51 recombinase involved_in IEA Ensembl GO_REF:0000107 NCBI chr15:19,638,310...19,672,474
Ensembl chr15:37,891,056...37,925,207 		JBrowse link
G RAD51AP1 RAD51 associated protein 1 involved_in IEA Ensembl
TreeGrafter		 GO_REF:0000107 GO_REF:0000118 NCBI chr12:4,657,972...4,679,232
Ensembl chr12:4,578,621...4,599,879 		JBrowse link
G RAD51D RAD51 paralog D acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr17:21,666,236...21,693,886
Ensembl chr17:21,958,212...21,978,406 		JBrowse link
G RFWD3 ring finger and WD repeat domain 3 involved_in IEA InterPro
Ensembl		 GO_REF:0000002 GO_REF:0000107 NCBI chr16:55,187,178...55,233,265
Ensembl chr16:74,541,450...74,586,951 		JBrowse link
G SPRTN SprT-like N-terminal domain involved_in IEA Ensembl GO_REF:0000107 NCBI chr 1:206,889,897...206,906,047
Ensembl chr 1:211,914,082...211,931,093 		JBrowse link
G XRCC3 X-ray repair cross complementing 3 involved_in IEA Ensembl GO_REF:0000107 NCBI chr14:84,323,644...84,341,763
Ensembl chr14:104,131,903...104,149,037 		JBrowse link
intrinsic apoptotic signaling pathway in response to DNA damage term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ATAD5 ATPase family AAA domain containing 5 acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr17:25,944,259...26,009,317
Ensembl chr17:25,436,195...25,496,242 		JBrowse link
G ATM ATM serine/threonine kinase acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr11:103,109,979...103,256,405
Ensembl chr11:106,584,228...106,727,041 		JBrowse link
G BAD BCL2 associated agonist of cell death acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr11:59,626,981...59,641,824
Ensembl chr11:62,971,808...62,986,257 		JBrowse link
G BAK1 BCL2 antagonist/killer 1 acts_upstream_of_or_within
involved_in		 ISO
IEA		 (PMID:15967824)
(PMID:15901672)		 MGI
TreeGrafter		 PMID:15901672 PMID:15967824 GO_REF:0000118 NCBI chr 6:33,146,998...33,154,755
Ensembl chr 6:34,255,769...34,263,211 		JBrowse link
G BAX BCL2 associated X, apoptosis regulator involved_in
acts_upstream_of_or_within		 IEA TreeGrafter
Ensembl		 GO_REF:0000107 GO_REF:0000118 NCBI chr19:45,955,926...45,962,870
Ensembl chr19:54,793,594...54,800,468 		JBrowse link
G BCL2 BCL2 apoptosis regulator involved_in
acts_upstream_of_or_within		 IEA TreeGrafter
Ensembl		 GO_REF:0000107 GO_REF:0000118 NCBI chr18:56,481,212...56,679,012
Ensembl chr18:59,802,443...59,992,100 		JBrowse link
G BCL2A1 BCL2 related protein A1 involved_in IEA TreeGrafter GO_REF:0000118 NCBI chr15:58,925,853...58,935,122
Ensembl chr15:77,882,940...77,893,628 		JBrowse link
G BCL2L1 BCL2 like 1 involved_in
acts_upstream_of_or_within		 IEA TreeGrafter
Ensembl		 GO_REF:0000107 GO_REF:0000118 NCBI chr20:27,955,688...28,015,950
Ensembl chr20:29,088,055...29,146,585 		JBrowse link
G BCL2L10 BCL2 like 10 involved_in IEA TreeGrafter GO_REF:0000118 NCBI chr15:31,049,509...31,057,273
Ensembl chr15:49,376,576...49,380,109 		JBrowse link
G BCL2L11 BCL2 like 11 acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr2A:90,862,070...90,909,833
Ensembl chr2A:112,337,927...112,385,079 		JBrowse link
G BOK BCL2 family apoptosis regulator BOK involved_in IEA TreeGrafter GO_REF:0000118 NCBI chr2B:128,832,458...128,847,918
Ensembl chr2B:247,626,494...247,640,238 		JBrowse link
G BRCA1 BRCA1 DNA repair associated acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr17:14,197,946...14,279,064
Ensembl chr17:14,428,526...14,506,815 		JBrowse link
G BRCA2 BRCA2 DNA repair associated acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr13:13,574,422...13,658,967
Ensembl chr13:32,010,066...32,091,332 		JBrowse link
G CASP9 caspase 9 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 1:14,630,659...14,662,865
Ensembl chr 1:15,624,666...15,656,266 		JBrowse link
G CHEK2 checkpoint kinase 2 involved_in ISO (PMID:12717439), (PMID:18644861)
(PMID:12402044)		 UniProt PMID:12402044 PMID:12717439 PMID:18644861 NCBI chr22:9,757,038...9,811,171 JBrowse link
G CRIP1 cysteine rich protein 1 involved_in IEA Ensembl
TreeGrafter		 GO_REF:0000107 GO_REF:0000118 Ensembl chr14:105,914,119...105,915,365 JBrowse link
G E2F1 E2F transcription factor 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr20:29,963,083...29,973,860
Ensembl chr20:31,103,764...31,110,604 		JBrowse link
G EI24 EI24 autophagy associated transmembrane protein acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr11:120,389,136...120,404,347
Ensembl chr11:124,302,289...124,317,346 		JBrowse link
G EPHA2 EPH receptor A2 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 1:15,259,915...15,292,983
Ensembl chr 1:16,253,513...16,284,787 		JBrowse link
G ERCC6 ERCC excision repair 6, chromatin remodeling factor acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr10:44,703,720...44,784,948 JBrowse link
G FNIP2 folliculin interacting protein 2 involved_in ISO (PMID:19137017) UniProt PMID:19137017 NCBI chr 4:151,086,854...151,224,192
Ensembl chr 4:162,896,805...163,032,167 		JBrowse link
G HIC1 HIC ZBTB transcriptional repressor 1 involved_in ISO (PMID:16269335) UniProt PMID:16269335 NCBI chr17:2,045,960...2,051,483 JBrowse link
G HMOX1 heme oxygenase 1 ISO RGD PMID:11854317 RGD:625692 NCBI chr22:16,388,368...16,401,289
Ensembl chr22:34,230,825...34,244,063 		JBrowse link
G HTRA2 HtrA serine peptidase 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chr2A:74,596,020...74,599,790
Ensembl chr2A:76,102,240...76,106,152 		JBrowse link
G IER3 immediate early response 3 acts_upstream_of_or_within ISO (PMID:11753682) MGI PMID:11753682 NCBI chr 6:30,488,162...30,489,784 JBrowse link
G IKBKE inhibitor of nuclear factor kappa B kinase subunit epsilon involved_in IEA Ensembl GO_REF:0000107 NCBI chr 1:182,070,565...182,096,797
Ensembl chr 1:186,351,807...186,377,971 		JBrowse link
G LOC100979315 phorbol-12-myristate-13-acetate-induced protein 1 acts_upstream_of_or_within ISO (PMID:12952892) MGI PMID:12952892 NCBI chr18:53,286,590...53,290,913
Ensembl chr18:56,611,098...56,615,449 		JBrowse link
G MAEL maelstrom spermatogenic transposon silencer acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr 1:142,341,646...142,442,521
Ensembl chr 1:146,195,482...146,228,669 		JBrowse link
G MBD4 methyl-CpG binding domain 4, DNA glycosylase acts_upstream_of_or_within ISO (PMID:14562041) MGI PMID:14562041 NCBI chr 3:126,489,125...126,498,034
Ensembl chr 3:133,839,643...133,851,450 		JBrowse link
G MCL1 MCL1 apoptosis regulator, BCL2 family member involved_in
acts_upstream_of_or_within		 IEA TreeGrafter
Ensembl		 GO_REF:0000107 GO_REF:0000118 NCBI chr 1:125,918,760...125,923,952
Ensembl chr 1:129,566,827...129,572,086 		JBrowse link
G MLH1 mutL homolog 1 acts_upstream_of_or_within ISO (PMID:14562041) MGI PMID:14562041 NCBI chr 3:36,899,828...36,957,076
Ensembl chr 3:37,189,439...37,245,801 		JBrowse link
G MOAP1 modulator of apoptosis 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr14:73,814,859...73,817,607
Ensembl chr14:93,152,551...93,153,606 		JBrowse link
G MSH2 mutS homolog 2 acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr2A:47,524,468...47,602,376
Ensembl chr2A:48,447,207...48,554,461 		JBrowse link
G MSH6 mutS homolog 6 acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr2A:47,901,591...47,926,662
Ensembl chr2A:48,824,350...48,849,779 		JBrowse link
G MYC MYC proto-oncogene, bHLH transcription factor acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr 8:124,387,561...124,393,551
Ensembl chr 8:127,131,512...127,136,863 		JBrowse link
G NFATC4 nuclear factor of activated T cells 4 acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr14:5,141,699...5,156,021
Ensembl chr14:23,266,702...23,279,249 		JBrowse link
G PABPN1 poly(A) binding protein nuclear 1 involved_in IEA TreeGrafter GO_REF:0000118 NCBI chr14:4,126,179...4,144,810
Ensembl chr14:22,220,986...22,239,403 		JBrowse link
G PCBP4 poly(rC) binding protein 4 involved_in ISO (PMID:10891498) UniProt PMID:10891498 NCBI chr 3:51,898,857...51,908,932
Ensembl chr 3:53,127,448...53,137,293 		JBrowse link
G PIK3R1 phosphoinositide-3-kinase regulatory subunit 1 acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr 5:45,701,219...45,786,652
Ensembl chr 5:47,267,286...47,350,960 		JBrowse link
G PML PML nuclear body scaffold acts_upstream_of_or_within
involved_in		 ISO
IEA		 (PMID:15626733)
(PMID:9806545)		 MGI
TreeGrafter		 PMID:9806545 PMID:15626733 GO_REF:0000118 NCBI chr15:52,903,874...52,955,151
Ensembl chr15:71,658,884...71,710,883 		JBrowse link
G POLB DNA polymerase beta acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr 8:41,582,370...41,615,950
Ensembl chr 8:39,026,991...39,060,464 		JBrowse link
G PRKDC protein kinase, DNA-activated, catalytic subunit involved_in
acts_upstream_of_or_within		 IEA TreeGrafter
Ensembl		 GO_REF:0000107 GO_REF:0000118 NCBI chr 8:44,201,391...44,386,803
Ensembl chr 8:41,593,029...41,778,299 		JBrowse link
G RAD9A RAD9 checkpoint clamp component A acts_upstream_of IEA Ensembl GO_REF:0000107 NCBI chr11:62,675,480...62,756,886
Ensembl chr11:66,061,208...66,068,214 		JBrowse link
G SFN stratifin involved_in IEA Ensembl GO_REF:0000107 NCBI chr 1:26,126,212...26,127,761
Ensembl chr 1:27,182,834...27,183,580 		JBrowse link
G SIRT1 sirtuin 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr10:64,368,878...64,401,684
Ensembl chr10:66,681,598...66,715,069 		JBrowse link
G SKIL SKI like proto-oncogene acts_upstream_of IEA Ensembl GO_REF:0000107 NCBI chr 3:167,372,104...167,411,287
Ensembl chr 3:175,562,007...175,600,181 		JBrowse link
G SOD2 superoxide dismutase 2 acts_upstream_of_or_within ISO (PMID:15642323) MGI PMID:15642323 NCBI chr 6:157,562,814...157,610,155
Ensembl chr 6:162,576,082...162,589,960 		JBrowse link
G TNF tumor necrosis factor acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr 6:31,236,650...31,239,423
Ensembl chr 6:32,126,618...32,129,381 		JBrowse link
G TNFRSF1A TNF receptor superfamily member 1A acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr12:6,457,617...6,470,969
Ensembl chr12:6,374,257...6,387,613 		JBrowse link
G TNFRSF1B TNF receptor superfamily member 1B involved_in
acts_upstream_of_or_within		 IEA TreeGrafter
Ensembl		 GO_REF:0000107 GO_REF:0000118 NCBI chr 1:10,915,743...10,957,765
Ensembl chr 1:12,130,663...12,172,646 		JBrowse link
G TOPORS TOP1 binding arginine/serine rich protein, E3 ubiquitin ligase involved_in IEA Ensembl GO_REF:0000107 NCBI chr 9:32,314,850...32,327,067
Ensembl chr 9:33,124,730...33,135,129 		JBrowse link
G UACA uveal autoantigen with coiled-coil domains and ankyrin repeats acts_upstream_of_or_within ISO (PMID:15271982) MGI PMID:15271982 NCBI chr15:49,607,308...49,711,188
Ensembl chr15:68,375,939...68,477,395 		JBrowse link
G USP47 ubiquitin specific peptidase 47 acts_upstream_of IEA Ensembl GO_REF:0000107 NCBI chr11:12,009,770...12,127,425
Ensembl chr11:11,703,617...11,821,074 		JBrowse link
G XPA XPA, DNA damage recognition and repair factor acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr 9:68,726,723...68,788,049
Ensembl chr 9:96,886,795...96,909,254 		JBrowse link
intrinsic apoptotic signaling pathway in response to DNA damage by p53 class mediator term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G AEN apoptosis enhancing nuclease involved_in IEA Ensembl
TreeGrafter		 GO_REF:0000107 GO_REF:0000118 NCBI chr15:67,237,871...67,321,808
Ensembl chr15:86,518,204...86,529,579 		JBrowse link
G ATAD5 ATPase family AAA domain containing 5 acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr17:25,944,259...26,009,317
Ensembl chr17:25,436,195...25,496,242 		JBrowse link
G BAG6 BAG cochaperone 6 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 6:31,300,126...31,313,829
Ensembl chr 6:32,190,037...32,204,321 		JBrowse link
G BBC3 BCL2 binding component 3 acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr19:44,203,517...44,215,860 JBrowse link
G BCL3 BCL3 transcription coactivator acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr19:41,696,162...41,708,485
Ensembl chr19:50,304,171...50,313,005 		JBrowse link
G BRCA2 BRCA2 DNA repair associated acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr13:13,574,422...13,658,967
Ensembl chr13:32,010,066...32,091,332 		JBrowse link
G CDIP1 cell death inducing p53 target 1 involved_in
acts_upstream_of_or_within		 IEA TreeGrafter
Ensembl		 GO_REF:0000107 GO_REF:0000118 NCBI chr16:3,437,414...3,464,989
Ensembl chr16:4,604,954...4,632,724 		JBrowse link
G CDKN1A cyclin dependent kinase inhibitor 1A acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr 6:36,241,405...36,250,032
Ensembl chr 6:37,436,990...37,445,599 		JBrowse link
G CHEK2 checkpoint kinase 2 acts_upstream_of_or_within ISO (PMID:10710310) MGI PMID:10710310 NCBI chr22:9,757,038...9,811,171 JBrowse link
G DDIT4 DNA damage inducible transcript 4 involved_in IEA Ensembl GO_REF:0000107 NCBI chr10:68,796,712...68,798,840
Ensembl chr10:71,264,029...71,266,149 		JBrowse link
G DYRK2 dual specificity tyrosine phosphorylation regulated kinase 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chr12:21,241,325...21,260,321
Ensembl chr12:21,757,436...21,767,505 		JBrowse link
G ELL3 elongation factor for RNA polymerase II 3 acts_upstream_of IEA Ensembl GO_REF:0000107 NCBI chr15:22,732,742...22,737,522
Ensembl chr15:40,821,759...40,827,070 		JBrowse link
G EP300 E1A binding protein p300 involved_in IEA Ensembl GO_REF:0000107 NCBI chr22:21,986,467...22,076,921
Ensembl chr22:40,079,503...40,168,604 		JBrowse link
G HIPK1 homeodomain interacting protein kinase 1 involved_in
acts_upstream_of_or_within		 IEA TreeGrafter
Ensembl		 GO_REF:0000107 GO_REF:0000118 NCBI chr 1:88,579,603...88,627,988
Ensembl chr 1:123,633,134...123,677,714 		JBrowse link
G HIPK2 homeodomain interacting protein kinase 2 involved_in
acts_upstream_of_or_within		 IEA TreeGrafter
Ensembl		 GO_REF:0000107 GO_REF:0000118 NCBI chr 7:131,506,711...131,722,943 JBrowse link
G IFI16 interferon gamma inducible protein 16 acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr 1:134,364,706...134,405,910
Ensembl chr 1:138,152,328...138,203,424 		JBrowse link
G LOC100979315 phorbol-12-myristate-13-acetate-induced protein 1 acts_upstream_of_or_within ISO (PMID:10807576) MGI PMID:10807576 NCBI chr18:53,286,590...53,290,913
Ensembl chr18:56,611,098...56,615,449 		JBrowse link
G MSH2 mutS homolog 2 acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr2A:47,524,468...47,602,376
Ensembl chr2A:48,447,207...48,554,461 		JBrowse link
G NUPR1 nuclear protein 1, transcriptional regulator acts_upstream_of_or_within ISO (PMID:11896600) MGI PMID:11896600 Ensembl chr16:29,015,155...29,016,987 JBrowse link
G PHLDA3 pleckstrin homology like domain family A member 3 involved_in IEA Ensembl
TreeGrafter		 GO_REF:0000107 GO_REF:0000118 NCBI chr 1:177,063,775...177,067,714
Ensembl chr 1:181,367,976...181,368,359 		JBrowse link
G PML PML nuclear body scaffold involved_in ISO (PMID:15626733) UniProt PMID:15626733 NCBI chr15:52,903,874...52,955,151
Ensembl chr15:71,658,884...71,710,883 		JBrowse link
G PPP2R5C protein phosphatase 2 regulatory subunit B'gamma involved_in ISO (PMID:17245430) UniProt PMID:17245430 NCBI chr14:82,383,086...82,549,822
Ensembl chr14:102,206,396...102,372,978 		JBrowse link
G PYCARD PYD and CARD domain containing involved_in IEA Ensembl GO_REF:0000107 NCBI chr16:23,764,386...23,765,732
Ensembl chr16:31,571,363...31,573,828 		JBrowse link
G RPS27L ribosomal protein S27 like involved_in ISO (PMID:17057733), (PMID:18056458) UniProt PMID:17057733 PMID:18056458 NCBI chr15:42,101,137...42,105,019
Ensembl chr15:60,397,131...60,400,643 		JBrowse link
G SHISA5 shisa family member 5 acts_upstream_of_or_within ISO (PMID:12135983) MGI PMID:12135983 NCBI chr 3:48,389,924...48,426,064
Ensembl chr 3:49,471,604...49,508,840 		JBrowse link
G SIRT1 sirtuin 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr10:64,368,878...64,401,684
Ensembl chr10:66,681,598...66,715,069 		JBrowse link
G SNW1 SNW domain containing 1 involved_in ISO (PMID:21460037) UniProt PMID:21460037 NCBI chr14:58,271,830...58,315,773
Ensembl chr14:77,472,387...77,517,315 		JBrowse link
G TMEM109 transmembrane protein 109 involved_in
acts_upstream_of_or_within		 IEA TreeGrafter
Ensembl		 GO_REF:0000107 GO_REF:0000118 NCBI chr11:56,177,335...56,186,645
Ensembl chr11:59,617,802...59,627,349 		JBrowse link
G TOPORS TOP1 binding arginine/serine rich protein, E3 ubiquitin ligase acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr 9:32,314,850...32,327,067
Ensembl chr 9:33,124,730...33,135,129 		JBrowse link
G TP53 tumor protein p53 acts_upstream_of_or_within
involved_in		 ISO
IEA		 (PMID:14654789), (PMID:14744935)
(PMID:15983387)
(PMID:12135983)
(PMID:16286009)
(PMID:17476307)
(PMID:16777961)
(PMID:12952892)		 MGI
Ensembl		 PMID:12135983 PMID:12952892 PMID:14654789 PMID:14744935 PMID:15983387 More... GO_REF:0000107 NCBI chr17:7,699,449...7,717,812
Ensembl chr17:7,684,922...7,706,120 		JBrowse link
G TP63 tumor protein p63 acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr 3:186,651,879...186,918,300
Ensembl chr 3:195,199,167...195,474,104 		JBrowse link
G TP73 tumor protein p73 involved_in
acts_upstream_of		 IEA Ensembl GO_REF:0000107 NCBI chr 1:2,323,399...2,405,295
Ensembl chr 1:3,476,064...3,529,206 		JBrowse link
G USP28 ubiquitin specific peptidase 28 involved_in ISO (PMID:16901786) UniProt PMID:16901786 NCBI chr11:108,676,566...108,754,372
Ensembl chr11:112,517,693...112,595,585 		JBrowse link
late meiotic recombination nodule assembly term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G MCMDC2 minichromosome maintenance domain containing 2 acts_upstream_of_or_within ISO (PMID:27760146) MGI PMID:27760146 NCBI chr 8:63,412,462...63,465,258 JBrowse link
meiotic DNA double-strand break processing term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G SPO11 SPO11 initiator of meiotic double strand breaks involved_in IEA TreeGrafter GO_REF:0000118 NCBI chr20:53,669,128...53,684,328
Ensembl chr20:54,948,661...54,963,384 		JBrowse link
meiotic DNA double-strand break processing involved in reciprocal meiotic recombination term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G BRIP1 BRCA1 interacting DNA helicase 1 acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr17:55,786,568...55,973,366
Ensembl chr17:60,901,073...61,083,462 		JBrowse link
G C15H14orf39 chromosome 15 C14orf39 homolog involved_in IEA Ensembl
TreeGrafter		 GO_REF:0000107 GO_REF:0000118 NCBI chr14:41,040,315...41,090,267
Ensembl chr14:59,304,040...59,351,956 		JBrowse link
meiotic DNA recombinase assembly term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G RAD51C RAD51 paralog C involved_in IEA TreeGrafter GO_REF:0000118 NCBI chr17:52,769,446...52,808,467
Ensembl chr17:57,621,552...57,660,701 		JBrowse link
meiotic DNA repair synthesis term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G SPATA22 spermatogenesis associated 22 involved_in
acts_upstream_of_or_within		 IEA InterPro
Ensembl		 GO_REF:0000002 GO_REF:0000107 NCBI chr17:3,120,296...3,532,343
Ensembl chr17:3,489,143...3,560,654 		JBrowse link
G SYCP1 synaptonemal complex protein 1 involved_in
acts_upstream_of_or_within		 IEA TreeGrafter
Ensembl		 GO_REF:0000107 GO_REF:0000118 NCBI chr 1:87,565,888...87,701,530
Ensembl chr 1:122,614,520...122,754,137 		JBrowse link
G SYCP3 synaptonemal complex protein 3 acts_upstream_of_or_within ISO (PMID:22164254) MGI PMID:22164254 NCBI chr12:99,311,260...99,322,007
Ensembl chr12:102,711,837...102,720,728 		JBrowse link
G TEX12 testis expressed 12 acts_upstream_of_or_within ISO (PMID:22164254) MGI PMID:22164254 NCBI chr11:107,048,417...107,053,655
Ensembl chr11:110,817,016...110,896,829 		JBrowse link
meiotic recombination nodule assembly term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G MCMDC2 minichromosome maintenance domain containing 2 acts_upstream_of_or_within ISO (PMID:27760146) MGI PMID:27760146 NCBI chr 8:63,412,462...63,465,258 JBrowse link
mismatch repair term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G EXO1 exonuclease 1 involved_in IEA Ensembl
TreeGrafter		 GO_REF:0000107 GO_REF:0000118 NCBI chr 1:217,410,175...217,451,982
Ensembl chr 1:222,389,684...222,431,556 		JBrowse link
G MLH1 mutL homolog 1 involved_in
acts_upstream_of_or_within		 IEA InterPro
Ensembl
TreeGrafter		 GO_REF:0000002 GO_REF:0000107 GO_REF:0000118 NCBI chr 3:36,899,828...36,957,076
Ensembl chr 3:37,189,439...37,245,801 		JBrowse link
G MLH3 mutL homolog 3 involved_in
acts_upstream_of_or_within		 IEA InterPro
Ensembl
TreeGrafter		 GO_REF:0000002 GO_REF:0000107 GO_REF:0000118 NCBI chr14:55,568,033...55,603,672
Ensembl chr14:74,413,319...74,445,749 		JBrowse link
G MSH2 mutS homolog 2 involved_in
acts_upstream_of_or_within		 IEA UniProt
Ensembl
TreeGrafter
InterPro		 GO_REF:0000002 GO_REF:0000104 GO_REF:0000107 GO_REF:0000118 NCBI chr2A:47,524,468...47,602,376
Ensembl chr2A:48,447,207...48,554,461 		JBrowse link
G MSH3 mutS homolog 3 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:10706084)
(PMID:10706084), (PMID:16728433)
(PMID:11691815)
(PMID:16728433)		 InterPro
TreeGrafter
MGI
Ensembl		 PMID:10706084 PMID:11691815 PMID:16728433 GO_REF:0000002 GO_REF:0000107 GO_REF:0000118 NCBI chr 5:34,408,469...34,663,483
Ensembl chr 5:34,719,322...34,938,469 		JBrowse link
G MSH4 mutS homolog 4 involved_in IEA InterPro GO_REF:0000002 NCBI chr 1:75,011,947...75,130,036
Ensembl chr 1:76,983,852...77,099,896 		JBrowse link
G MSH5 mutS homolog 5 involved_in IEA InterPro GO_REF:0000002 NCBI chr 6:31,401,343...31,424,665
Ensembl chr 6:32,290,511...32,311,085 		JBrowse link
G MSH6 mutS homolog 6 acts_upstream_of_or_within
involved_in		 ISO
IEA		 RGD
Ensembl
TreeGrafter
InterPro		 PMID:18417481 GO_REF:0000002 GO_REF:0000107 GO_REF:0000118 RGD:2292505 NCBI chr2A:47,901,591...47,926,662
Ensembl chr2A:48,824,350...48,849,779 		JBrowse link
G MUTYH mutY DNA glycosylase involved_in IEA TreeGrafter GO_REF:0000118 NCBI chr 1:44,632,102...44,643,292
Ensembl chr 1:45,990,588...46,002,645 		JBrowse link
G PCNA proliferating cell nuclear antigen involved_in IEA Ensembl
TreeGrafter		 GO_REF:0000107 GO_REF:0000118 NCBI chr20:5,134,930...5,146,603
Ensembl chr20:4,927,731...4,939,440 		JBrowse link
G PMS1 PMS1 homolog 1, mismatch repair system component involved_in
acts_upstream_of_or_within		 IEA InterPro
Ensembl
TreeGrafter		 GO_REF:0000002 GO_REF:0000107 GO_REF:0000118 NCBI chr2B:77,090,215...77,180,724
Ensembl chr2B:195,010,233...195,100,492 		JBrowse link
G PMS2 PMS1 homolog 2, mismatch repair system component involved_in
acts_upstream_of_or_within		 IEA InterPro
Ensembl
TreeGrafter		 GO_REF:0000002 GO_REF:0000107 GO_REF:0000118 NCBI chr 7:7,433,031...7,459,560
Ensembl chr 7:6,167,403...6,202,984 		JBrowse link
G RNASEH2A ribonuclease H2 subunit A involved_in
acts_upstream_of_or_within		 IEA TreeGrafter
Ensembl		 GO_REF:0000107 GO_REF:0000118 NCBI chr19:12,363,721...12,375,316
Ensembl chr19:13,112,242...13,119,514 		JBrowse link
G RPA1 replication protein A1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr17:1,813,610...1,886,093
Ensembl chr17:1,705,380...1,775,596 		JBrowse link
G RPA2 replication protein A2 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 1:27,151,784...27,175,110
Ensembl chr 1:28,191,731...28,214,666 		JBrowse link
G RPA3 replication protein A3 involved_in IEA Ensembl
TreeGrafter		 GO_REF:0000107 GO_REF:0000118 NCBI chr 7:8,361,623...8,365,098
Ensembl chr 7:7,713,629...7,717,169 		JBrowse link
G SETD2 SET domain containing 2, histone lysine methyltransferase involved_in IEA Ensembl GO_REF:0000107 NCBI chr 3:46,916,615...47,064,046
Ensembl chr 3:48,018,517...48,163,999 		JBrowse link
G WRN WRN RecQ like helicase involved_in ISO (PMID:17715146) BHF-UCL PMID:17715146 NCBI chr 8:30,353,643...30,492,978
Ensembl chr 8:27,541,145...27,679,855 		JBrowse link
G XPC XPC complex subunit, DNA damage recognition and repair factor involved_in IEA TreeGrafter GO_REF:0000118 NCBI chr 3:14,063,499...14,097,023
Ensembl chr 3:14,403,958...14,437,377 		JBrowse link
mismatch repair involved in maintenance of fidelity involved in DNA-dependent DNA replication term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G MCM9 minichromosome maintenance 9 homologous recombination repair factor involved_in IEA Ensembl GO_REF:0000107 NCBI chr 6:116,620,188...116,743,435
Ensembl chr 6:120,763,329...120,881,865 		JBrowse link
mitochondrial DNA repair term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G CHCHD4 coiled-coil-helix-coiled-coil-helix domain containing 4 acts_upstream_of_or_within ISO (PMID:24101517) MGI PMID:24101517 NCBI chr 3:14,030,410...14,043,233
Ensembl chr 3:14,370,854...14,383,660 		JBrowse link
G LIG3 DNA ligase 3 acts_upstream_of_or_within
involved_in		 ISO
IEA		 (PMID:21390131), (PMID:21390132) MGI
Ensembl		 PMID:21390131 PMID:21390132 GO_REF:0000107 NCBI chr17:21,776,483...21,805,706
Ensembl chr17:22,074,046...22,095,220 		JBrowse link
G MGME1 mitochondrial genome maintenance exonuclease 1 involved_in IEA UniProt GO_REF:0000104 NCBI chr20:17,928,751...17,950,907
Ensembl chr20:17,907,241...17,929,214 		JBrowse link
G NEURL4 neuralized E3 ubiquitin protein ligase 4 acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr17:7,349,739...7,363,419
Ensembl chr17:7,336,447...7,349,473 		JBrowse link
G PARP1 poly(ADP-ribose) polymerase 1 acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr 1:201,820,355...201,867,673
Ensembl chr 1:206,812,981...206,860,356 		JBrowse link
G PRIMPOL primase and DNA directed polymerase involved_in IEA Ensembl GO_REF:0000107 NCBI chr 4:176,815,122...176,860,682 JBrowse link
G SLC25A16 solute carrier family 25 member 16 involved_in IEA Ensembl GO_REF:0000107 NCBI chr10:64,898,024...64,956,541
Ensembl chr10:67,506,006...67,549,308
Ensembl chr10:67,506,006...67,549,308 		JBrowse link
G TP53 tumor protein p53 acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr17:7,699,449...7,717,812
Ensembl chr17:7,684,922...7,706,120 		JBrowse link
mitochondrial double-strand break repair via homologous recombination term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G MRE11 MRE11 homolog, double strand break repair nuclease involved_in IEA TreeGrafter GO_REF:0000118 NCBI chr11:89,418,537...89,500,705
Ensembl chr11:92,918,549...92,985,966 		JBrowse link
mitotic DNA damage checkpoint signaling term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G CDC7 cell division cycle 7 involved_in IEA TreeGrafter GO_REF:0000118 NCBI chr 1:94,158,628...94,183,537
Ensembl chr 1:92,902,631...92,927,203 		JBrowse link
G ZNF830 zinc finger protein 830 involved_in
acts_upstream_of_or_within		 IEA TreeGrafter
Ensembl		 GO_REF:0000107 GO_REF:0000118 NCBI chr17:21,823,998...21,825,632
Ensembl chr17:22,116,304...22,117,482 		JBrowse link
mitotic G1 DNA damage checkpoint signaling term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G CCND1 cyclin D1 involved_in ISO (PMID:19412162) UniProt PMID:19412162 NCBI chr11:64,737,006...64,750,353 JBrowse link
G CDKN1A cyclin dependent kinase inhibitor 1A acts_upstream_of IEA Ensembl GO_REF:0000107 NCBI chr 6:36,241,405...36,250,032
Ensembl chr 6:37,436,990...37,445,599 		JBrowse link
G DGKZ diacylglycerol kinase zeta involved_in ISO (PMID:16286473) UniProt PMID:16286473 NCBI chr11:46,291,592...46,339,127
Ensembl chr11:46,841,605...46,889,763 		JBrowse link
G FBXO31 F-box protein 31 involved_in IEA Ensembl GO_REF:0000107 NCBI chr16:67,997,481...68,053,081
Ensembl chr16:87,322,364...87,377,104 		JBrowse link
G GIGYF2 GRB10 interacting GYF protein 2 acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr2B:119,929,004...120,090,367
Ensembl chr2B:238,847,674...239,007,549 		JBrowse link
G MUC1 mucin 1, cell surface associated acts_upstream_of ISO (PMID:15710329) BHF-UCL PMID:15710329 NCBI chr 1:130,533,508...130,537,866
Ensembl chr 1:134,141,969...134,145,850 		JBrowse link
G PRKDC protein kinase, DNA-activated, catalytic subunit involved_in IEA Ensembl GO_REF:0000107 NCBI chr 8:44,201,391...44,386,803
Ensembl chr 8:41,593,029...41,778,299 		JBrowse link
G RFWD3 ring finger and WD repeat domain 3 involved_in IEA Ensembl GO_REF:0000107 NCBI chr16:55,187,178...55,233,265
Ensembl chr16:74,541,450...74,586,951 		JBrowse link
G RPA2 replication protein A2 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 1:27,151,784...27,175,110
Ensembl chr 1:28,191,731...28,214,666 		JBrowse link
G RPS27L ribosomal protein S27 like involved_in ISO (PMID:18056458) UniProt PMID:18056458 NCBI chr15:42,101,137...42,105,019
Ensembl chr15:60,397,131...60,400,643 		JBrowse link
G SDE2 SDE2 telomere maintenance homolog involved_in IEA Ensembl GO_REF:0000107 NCBI chr 1:201,443,945...201,460,668
Ensembl chr 1:206,441,517...206,457,679 		JBrowse link
G TP53 tumor protein p53 acts_upstream_of_or_within
involved_in		 IEA Ensembl GO_REF:0000107 NCBI chr17:7,699,449...7,717,812
Ensembl chr17:7,684,922...7,706,120 		JBrowse link
G TREX1 three prime repair exonuclease 1 acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr 3:48,387,762...48,389,693
Ensembl chr 3:49,470,222...49,471,331 		JBrowse link
G TRIAP1 TP53 regulated inhibitor of apoptosis 1 acts_upstream_of IEA Ensembl GO_REF:0000107 NCBI chr12:118,025,599...118,028,045
Ensembl chr12:121,400,063...121,402,506 		JBrowse link
G WAC WW domain containing adaptor with coiled-coil involved_in IEA Ensembl GO_REF:0000107 NCBI chr10:28,685,294...28,777,176
Ensembl chr10:29,042,331...29,130,591 		JBrowse link
mitotic G2 DNA damage checkpoint signaling term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ABRAXAS1 abraxas 1, BRCA1 A complex subunit involved_in IEA Ensembl GO_REF:0000107 NCBI chr 4:40,711,139...40,736,763
Ensembl chr 4:46,556,892...46,581,573 		JBrowse link
G ATM ATM serine/threonine kinase involved_in IEA Ensembl GO_REF:0000107 NCBI chr11:103,109,979...103,256,405
Ensembl chr11:106,584,228...106,727,041 		JBrowse link
G BABAM1 BRISC and BRCA1 A complex member 1 involved_in IEA Ensembl
TreeGrafter		 GO_REF:0000107 GO_REF:0000118 NCBI chr19:16,755,518...16,767,634
Ensembl chr19:17,729,568...17,742,447 		JBrowse link
G BABAM2 BRISC and BRCA1 A complex member 2 involved_in IEA Ensembl
UniProt		 GO_REF:0000104 GO_REF:0000107 NCBI chr2A:27,884,907...28,338,302
Ensembl chr2A:27,974,917...28,420,519 		JBrowse link
G BLM BLM RecQ like helicase involved_in IEA Ensembl GO_REF:0000107 NCBI chr15:69,407,248...69,508,070
Ensembl chr15:88,607,157...88,707,864 		JBrowse link
G BRCA1 BRCA1 DNA repair associated involved_in IEA Ensembl
TreeGrafter		 GO_REF:0000107 GO_REF:0000118 NCBI chr17:14,197,946...14,279,064
Ensembl chr17:14,428,526...14,506,815 		JBrowse link
G BRCC3 BRCA1/BRCA2-containing complex subunit 3 involved_in IEA UniProt
Ensembl		 GO_REF:0000104 GO_REF:0000107 NCBI chr  X:144,550,320...144,592,795
Ensembl chr  X:154,389,283...154,428,669 		JBrowse link
G BRSK1 BR serine/threonine kinase 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr19:52,326,538...52,355,060
Ensembl chr19:61,021,493...61,045,659 		JBrowse link
G C8H10orf90 chromosome 8 C10orf90 homolog involved_in ISO (PMID:20154723) UniProt PMID:20154723 NCBI chr10:122,987,122...123,243,653
Ensembl chr10:127,259,451...127,357,119 		JBrowse link
G CCNG1 cyclin G1 ISO RGD PMID:9464250 RGD:2316029 NCBI chr 5:158,814,563...158,822,019
Ensembl chr 5:165,592,971...165,598,728 		JBrowse link
G CDC14B cell division cycle 14B involved_in ISO (PMID:18662541) UniProt PMID:18662541 NCBI chr 9:67,596,037...67,715,668 JBrowse link
G CDK1 cyclin dependent kinase 1 involved_in
acts_upstream_of_or_within		 IEA TreeGrafter
Ensembl		 GO_REF:0000107 GO_REF:0000118 NCBI chr10:57,314,692...57,331,261
Ensembl chr10:59,647,993...59,664,434 		JBrowse link
G CDK5RAP3 CDK5 regulatory subunit associated protein 3 involved_in ISO (PMID:15790566) UniProt PMID:15790566 NCBI chr17:9,556,313...9,567,099
Ensembl chr17:9,738,141...9,749,302 		JBrowse link
G CDKN1A cyclin dependent kinase inhibitor 1A involved_in IEA Ensembl GO_REF:0000107 NCBI chr 6:36,241,405...36,250,032
Ensembl chr 6:37,436,990...37,445,599 		JBrowse link
G CHEK1 checkpoint kinase 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr11:120,446,352...120,478,207
Ensembl chr11:124,359,218...124,390,981 		JBrowse link
G CLSPN claspin involved_in IEA Ensembl
TreeGrafter		 GO_REF:0000107 GO_REF:0000118 NCBI chr 1:34,991,082...35,040,515
Ensembl chr 1:36,182,726...36,218,544 		JBrowse link
G CREB3L1 cAMP responsive element binding protein 3 like 1 involved_in ISO (PMID:37178686) UniProt PMID:37178686 NCBI chr11:46,236,384...46,280,145
Ensembl chr11:46,788,561...46,830,246 		JBrowse link
G DONSON DNA replication fork stabilization factor DONSON involved_in IEA Ensembl GO_REF:0000107 NCBI chr21:19,944,692...19,956,140
Ensembl chr21:33,317,841...33,328,132 		JBrowse link
G DTL denticleless E3 ubiquitin protein ligase homolog involved_in IEA Ensembl
TreeGrafter		 GO_REF:0000107 GO_REF:0000118 NCBI chr 1:187,603,600...187,672,006
Ensembl chr 1:192,466,408...192,535,071 		JBrowse link
G FOXN3 forkhead box N3 involved_in IEA Ensembl GO_REF:0000107 NCBI chr14:69,778,191...70,238,813
Ensembl chr14:89,140,892...89,387,807 		JBrowse link
G FOXO4 forkhead box O4 acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr  X:60,364,466...60,372,147
Ensembl chr  X:70,422,504...70,429,971 		JBrowse link
G FZR1 fizzy and cell division cycle 20 related 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr19:2,533,172...2,564,301
Ensembl chr19:3,500,117...3,510,867 		JBrowse link
G IER3 immediate early response 3 acts_upstream_of_or_within ISO (PMID:20467439) MGI PMID:20467439 NCBI chr 6:30,488,162...30,489,784 JBrowse link
G MBD4 methyl-CpG binding domain 4, DNA glycosylase acts_upstream_of_or_within ISO (PMID:14614141) MGI PMID:14614141 NCBI chr 3:126,489,125...126,498,034
Ensembl chr 3:133,839,643...133,851,450 		JBrowse link
G MBTPS1 membrane bound transcription factor peptidase, site 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr16:64,719,971...64,783,119
Ensembl chr16:84,063,508...84,126,000 		JBrowse link
G MBTPS2 membrane bound transcription factor peptidase, site 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chr  X:14,470,268...14,529,854
Ensembl chr  X:21,825,780...21,883,550 		JBrowse link
G MRE11 MRE11 homolog, double strand break repair nuclease acts_upstream_of_or_within
involved_in		 ISO
IEA		 (PMID:14690604) MGI
TreeGrafter		 PMID:14690604 GO_REF:0000118 NCBI chr11:89,418,537...89,500,705
Ensembl chr11:92,918,549...92,985,966 		JBrowse link
G MRNIP MRN complex interacting protein involved_in IEA Ensembl
TreeGrafter		 GO_REF:0000107 GO_REF:0000118 NCBI chr 5:174,989,967...175,020,550
Ensembl chr 5:182,299,016...182,340,632 		JBrowse link
G NBN nibrin involved_in
acts_upstream_of_or_within		 IEA InterPro
Ensembl
TreeGrafter		 GO_REF:0000002 GO_REF:0000107 GO_REF:0000118 NCBI chr 8:86,622,797...86,674,202
Ensembl chr 8:88,575,198...88,626,307 		JBrowse link
G NOP53 NOP53 ribosome biogenesis factor involved_in ISO (PMID:21741933) UniProt PMID:21741933 NCBI chr19:44,739,739...44,751,303 JBrowse link
G PLK1 polo like kinase 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr16:14,420,972...14,432,821
Ensembl chr16:23,928,773...23,940,779 		JBrowse link
G RINT1 RAD50 interactor 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 7:97,522,208...97,567,897
Ensembl chr 7:110,252,776...110,287,702 		JBrowse link
G SYF2 SYF2 pre-mRNA splicing factor acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr 1:24,422,931...24,432,870
Ensembl chr 1:25,397,241...25,406,806 		JBrowse link
G TAOK1 TAO kinase 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr17:27,222,725...27,385,713
Ensembl chr17:27,746,797...27,840,623 		JBrowse link
G TAOK2 TAO kinase 2 involved_in IEA Ensembl GO_REF:0000107 Ensembl chr16:30,347,229...30,366,743 JBrowse link
G TAOK3 TAO kinase 3 involved_in IEA Ensembl GO_REF:0000107 NCBI chr12:115,730,619...115,954,149
Ensembl chr12:119,109,642...119,226,502 		JBrowse link
G TICRR TOPBP1 interacting checkpoint and replication regulator involved_in IEA TreeGrafter GO_REF:0000118 NCBI chr15:68,270,029...68,322,201
Ensembl chr15:87,476,738...87,528,870 		JBrowse link
G TOPBP1 DNA topoisomerase II binding protein 1 involved_in IEA TreeGrafter GO_REF:0000118 NCBI chr 3:130,667,998...130,729,569
Ensembl chr 3:138,143,893...138,203,363 		JBrowse link
G TRIM39 tripartite motif containing 39 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 6:30,104,381...30,121,649
Ensembl chr 6:30,975,260...30,995,764 		JBrowse link
G UIMC1 ubiquitin interaction motif containing 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 5:172,205,958...172,321,758
Ensembl chr 5:179,271,577...179,374,229 		JBrowse link
mitotic intra-S DNA damage checkpoint signaling term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ATF2 activating transcription factor 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chr2B:62,348,245...62,444,428
Ensembl chr2B:179,799,365...179,895,007 		JBrowse link
G CHEK2 checkpoint kinase 2 involved_in ISO (PMID:11298456) UniProt PMID:11298456 NCBI chr22:9,757,038...9,811,171 JBrowse link
G EME1 essential meiotic structure-specific endonuclease 1 involved_in IEA TreeGrafter GO_REF:0000118 NCBI chr17:44,467,537...44,475,883
Ensembl chr17:49,341,791...49,349,959 		JBrowse link
G EME2 essential meiotic structure-specific endonuclease subunit 2 involved_in IEA TreeGrafter GO_REF:0000118 NCBI chr16:395,571...403,233
Ensembl chr16:1,825,622...1,829,557 		JBrowse link
G FANCD2 FA complementation group D2 involved_in IEA TreeGrafter GO_REF:0000118 NCBI chr 3:9,932,292...10,037,332
Ensembl chr 3:10,312,476...10,389,190 		JBrowse link
G HUS1 HUS1 checkpoint clamp component involved_in IEA TreeGrafter GO_REF:0000118 NCBI chr 7:48,606,848...48,622,194
Ensembl chr 7:48,714,668...48,731,005 		JBrowse link
G HUS1B HUS1 checkpoint clamp component B involved_in IEA TreeGrafter GO_REF:0000118 NCBI chr 6:466,508...469,590
Ensembl chr 6:601,288...602,124 		JBrowse link
G MRE11 MRE11 homolog, double strand break repair nuclease acts_upstream_of_or_within
involved_in		 ISO
IEA		 (PMID:14690604), (PMID:18614044) MGI
TreeGrafter		 PMID:14690604 PMID:18614044 GO_REF:0000118 NCBI chr11:89,418,537...89,500,705
Ensembl chr11:92,918,549...92,985,966 		JBrowse link
G MSH2 mutS homolog 2 acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr2A:47,524,468...47,602,376
Ensembl chr2A:48,447,207...48,554,461 		JBrowse link
G MUS81 MUS81 structure-specific endonuclease subunit involved_in IEA TreeGrafter GO_REF:0000118 NCBI chr11:61,220,699...61,226,747
Ensembl chr11:64,549,840...64,555,875 		JBrowse link
G NEK11 NIMA related kinase 11 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 3:128,111,202...128,434,781
Ensembl chr 3:135,433,828...135,757,221 		JBrowse link
G RAD17 RAD17 checkpoint clamp loader component involved_in IEA Ensembl GO_REF:0000107 NCBI chr 5:44,586,083...44,630,719
Ensembl chr 5:46,156,294...46,202,197 		JBrowse link
G RAD9A RAD9 checkpoint clamp component A involved_in
acts_upstream_of_or_within		 IEA TreeGrafter
Ensembl		 GO_REF:0000107 GO_REF:0000118 NCBI chr11:62,675,480...62,756,886
Ensembl chr11:66,061,208...66,068,214 		JBrowse link
G RAD9B RAD9 checkpoint clamp component B involved_in IEA TreeGrafter GO_REF:0000118 NCBI chr12:108,072,061...108,103,338
Ensembl chr12:111,467,845...111,498,350 		JBrowse link
G TIPIN TIMELESS interacting protein involved_in IEA Ensembl GO_REF:0000107 NCBI chr15:45,290,350...45,310,335
Ensembl chr15:63,566,463...63,585,717 		JBrowse link
G XPC XPC complex subunit, DNA damage recognition and repair factor acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr 3:14,063,499...14,097,023
Ensembl chr 3:14,403,958...14,437,377 		JBrowse link
negative regulation of DNA damage checkpoint term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G BRD4 bromodomain containing 4 involved_in ISO (PMID:23728299) UniProt PMID:23728299 NCBI chr19:14,768,239...14,805,770
Ensembl chr19:15,754,930...15,789,600 		JBrowse link
G CHEK2 checkpoint kinase 2 ISO RGD PMID:20637979 RGD:10401658 NCBI chr22:9,757,038...9,811,171 JBrowse link
negative regulation of DNA damage response, signal transduction by p53 class mediator term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G CD44 CD44 molecule (IN blood group) involved_in IEA Ensembl GO_REF:0000107 NCBI chr11:35,110,732...35,258,238
Ensembl chr11:34,985,634...35,079,009 		JBrowse link
G CD74 CD74 molecule involved_in IEA Ensembl
TreeGrafter		 GO_REF:0000107 GO_REF:0000118 NCBI chr 5:145,825,635...145,836,916
Ensembl chr 5:151,830,311...151,841,334 		JBrowse link
G DYRK1A dual specificity tyrosine phosphorylation regulated kinase 1A involved_in IEA Ensembl GO_REF:0000107 NCBI chr21:23,729,204...23,878,820
Ensembl chr21:37,137,253...37,231,987 		JBrowse link
G DYRK3 dual specificity tyrosine phosphorylation regulated kinase 3 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 1:182,237,556...182,255,984
Ensembl chr 1:186,517,041...186,530,272 		JBrowse link
G KDM1A lysine demethylase 1A involved_in IEA Ensembl GO_REF:0000107 NCBI chr 1:22,205,624...22,269,571
Ensembl chr 1:23,153,066...23,217,692 		JBrowse link
G MARCHF7 membrane associated ring-CH-type finger 7 involved_in IEA Ensembl GO_REF:0000107 NCBI chr2B:47,004,211...47,059,901
Ensembl chr2B:164,377,605...164,432,907 		JBrowse link
G MDM2 MDM2 proto-oncogene involved_in IEA Ensembl GO_REF:0000107 NCBI chr12:66,322,340...66,357,010
Ensembl chr12:69,102,084...69,133,278 		JBrowse link
G MIF macrophage migration inhibitory factor involved_in IEA Ensembl GO_REF:0000107 NCBI chr22:4,646,986...4,647,831
Ensembl chr22:22,730,807...22,732,009 		JBrowse link
G PCBP4 poly(rC) binding protein 4 acts_upstream_of_or_within ISO (PMID:20817677) MGI PMID:20817677 NCBI chr 3:51,898,857...51,908,932
Ensembl chr 3:53,127,448...53,137,293 		JBrowse link
G PSMD10 proteasome 26S subunit, non-ATPase 10 involved_in IEA Ensembl GO_REF:0000107 NCBI chr  X:97,182,090...97,189,523
Ensembl chr  X:107,552,186...107,559,616 		JBrowse link
G PTTG1IP PTTG1 interacting protein acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr21:31,143,600...31,169,231
Ensembl chr21:44,438,136...44,459,586 		JBrowse link
G SIRT1 sirtuin 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr10:64,368,878...64,401,684
Ensembl chr10:66,681,598...66,715,069 		JBrowse link
G SNAI1 snail family transcriptional repressor 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr20:46,321,075...46,328,865
Ensembl chr20:47,384,818...47,390,733 		JBrowse link
G SNAI2 snail family transcriptional repressor 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 8:45,341,857...45,345,544
Ensembl chr 8:42,723,971...42,730,904 		JBrowse link
G TWIST1 twist family bHLH transcription factor 1 involved_in ISO (PMID:17690110) BHF-UCL PMID:17690110 NCBI chr 7:19,761,041...19,765,665 JBrowse link
negative regulation of DNA repair term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G CGAS cyclic GMP-AMP synthase involved_in IEA Ensembl GO_REF:0000107 NCBI chr 6:71,252,050...71,279,121
Ensembl chr 6:74,544,251...74,566,965 		JBrowse link
G RPS3 ribosomal protein S3 involved_in ISO (PMID:17049931) UniProt PMID:17049931 NCBI chr11:70,460,702...70,466,909
Ensembl chr11:73,762,794...73,768,982 		JBrowse link
negative regulation of double-strand break repair term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G OTUB1 OTU deubiquitinase, ubiquitin aldehyde binding 1 involved_in IEA TreeGrafter GO_REF:0000118 NCBI chr11:59,342,820...59,355,386
Ensembl chr11:62,690,542...62,706,542 		JBrowse link
G OTUB2 OTU deubiquitinase, ubiquitin aldehyde binding 2 involved_in IEA TreeGrafter GO_REF:0000118 NCBI chr14:74,658,535...74,681,084
Ensembl chr14:93,991,913...94,015,157 		JBrowse link
G RNF169 ring finger protein 169 involved_in IEA Ensembl GO_REF:0000107 NCBI chr11:69,821,842...69,909,297
Ensembl chr11:73,126,127...73,207,340 		JBrowse link
G TWIST1 twist family bHLH transcription factor 1 involved_in ISO (PMID:17690110) BHF-UCL PMID:17690110 NCBI chr 7:19,761,041...19,765,665 JBrowse link
negative regulation of double-strand break repair via homologous recombination term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ABL1 ABL proto-oncogene 1, non-receptor tyrosine kinase involved_in IEA Ensembl GO_REF:0000107 NCBI chr 9:101,834,189...102,005,811
Ensembl chr 9:130,484,333...130,652,941 		JBrowse link
G C1QBP complement C1q binding protein involved_in IEA Ensembl GO_REF:0000107 NCBI chr17:5,481,114...5,487,482
Ensembl chr17:5,473,239...5,479,735 		JBrowse link
G CGAS cyclic GMP-AMP synthase involved_in IEA Ensembl
TreeGrafter		 GO_REF:0000107 GO_REF:0000118 NCBI chr 6:71,252,050...71,279,121
Ensembl chr 6:74,544,251...74,566,965 		JBrowse link
G CSNK2A1 casein kinase 2 alpha 1 involved_in ISO (PMID:28512243) UniProt PMID:28512243 NCBI chr20:689,494...752,092
Ensembl chr20:456,629...521,126 		JBrowse link
G FANCB FA complementation group B acts_upstream_of_or_within
involved_in		 ISO
IEA		 (PMID:25520194) MGI
TreeGrafter		 PMID:25520194 GO_REF:0000118 NCBI chr  X:7,470,574...7,500,958
Ensembl chr  X:14,752,934...14,781,817 		JBrowse link
G FBH1 F-box DNA helicase 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr10:5,931,389...5,978,844
Ensembl chr10:5,915,713...5,962,778 		JBrowse link
G HELB DNA helicase B involved_in IEA Ensembl
TreeGrafter		 GO_REF:0000107 GO_REF:0000118 NCBI chr12:22,571,448...22,607,417
Ensembl chr12:23,078,732...23,114,134 		JBrowse link
G KAT5 lysine acetyltransferase 5 involved_in IEA Ensembl GO_REF:0000107 NCBI chr11:61,071,118...61,078,667
Ensembl chr11:64,404,572...64,412,667 		JBrowse link
G KLHL15 kelch like family member 15 involved_in IEA Ensembl GO_REF:0000107 NCBI chr  X:16,583,117...16,625,029
Ensembl chr  X:23,956,827...23,997,742 		JBrowse link
G KMT5A lysine methyltransferase 5A involved_in ISO (PMID:27338793) UniProt PMID:27338793 NCBI chr12:120,982,059...121,007,360 JBrowse link
G MAD2L2 mitotic arrest deficient 2 like 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 1:10,436,532...10,454,023
Ensembl chr 1:11,654,963...11,661,526 		JBrowse link
G MAGEF1 MAGE family member F1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 3:181,750,186...181,751,900
Ensembl chr 3:190,229,865...190,230,791 		JBrowse link
G PARPBP PARP1 binding protein involved_in IEA Ensembl
TreeGrafter
InterPro		 GO_REF:0000002 GO_REF:0000107 GO_REF:0000118 NCBI chr12:99,707,641...99,784,993
Ensembl chr12:103,105,117...103,182,366 		JBrowse link
G PLK1 polo like kinase 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr16:14,420,972...14,432,821
Ensembl chr16:23,928,773...23,940,779 		JBrowse link
G POLQ DNA polymerase theta involved_in IEA Ensembl GO_REF:0000107 NCBI chr 3:118,535,968...118,648,275
Ensembl chr 3:125,446,829...125,559,283 		JBrowse link
G RADX RPA1 related single stranded DNA binding protein, X-linked involved_in IEA Ensembl GO_REF:0000107 NCBI chr  X:95,714,600...95,781,853
Ensembl chr  X:106,092,340...106,159,772 		JBrowse link
G RECQL5 RecQ like helicase 5 acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr17:69,577,778...69,618,068
Ensembl chr17:75,128,325...75,168,254 		JBrowse link
G RIF1 replication timing regulatory factor 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr2B:38,721,658...38,818,488
Ensembl chr2B:155,985,960...156,052,926 		JBrowse link
G RMI2 RecQ mediated genome instability 2 involved_in IEA TreeGrafter GO_REF:0000118 NCBI chr16:10,286,136...10,292,377
Ensembl chr16:11,480,066...11,513,561 		JBrowse link
G SENP3 SUMO specific peptidase 3 involved_in IEA Ensembl GO_REF:0000107 NCBI chr17:7,593,904...7,603,538
Ensembl chr17:7,580,106...7,589,838 		JBrowse link
G SHLD1 shieldin complex subunit 1 involved_in IEA Ensembl
TreeGrafter		 GO_REF:0000107 GO_REF:0000118 NCBI chr20:5,753,262...5,858,728
Ensembl chr20:5,537,488...5,642,107 		JBrowse link
G SHLD2 shieldin complex subunit 2 involved_in ISO (PMID:29656893) UniProt PMID:29656893 NCBI chr10:83,639,020...83,643,420 JBrowse link
G SHLD3 shieldin complex subunit 3 involved_in ISO (PMID:29656893) UniProt PMID:29656893 NCBI chr 5:48,376,338...48,382,052 JBrowse link
G SMCHD1 structural maintenance of chromosomes flexible hinge domain containing 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr18:11,479,742...11,627,035
Ensembl chr18:13,785,912...13,933,887 		JBrowse link
G TP53BP1 tumor protein p53 binding protein 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr15:22,364,696...22,472,499
Ensembl chr15:40,519,012...40,626,741 		JBrowse link
G UBQLN4 ubiquilin 4 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 1:131,374,635...131,395,986
Ensembl chr 1:135,209,490...135,225,666 		JBrowse link
negative regulation of double-strand break repair via nonhomologous end joining term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G AUNIP aurora kinase A and ninein interacting protein involved_in IEA Ensembl GO_REF:0000107 NCBI chr 1:25,090,690...25,118,062
Ensembl chr 1:26,157,953...26,185,578 		JBrowse link
G CYREN cell cycle regulator of NHEJ involved_in ISO (PMID:28959974) UniProt PMID:28959974 NCBI chr 7:127,130,587...127,148,824 JBrowse link
G ERCC6 ERCC excision repair 6, chromatin remodeling factor involved_in IEA Ensembl GO_REF:0000107 NCBI chr10:44,703,720...44,784,948 JBrowse link
G HMGA2 high mobility group AT-hook 2 involved_in ISO (PMID:19549901) UniProt PMID:19549901 NCBI chr12:22,954,946...23,096,623 JBrowse link
G HSF1 heat shock transcription factor 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 8:141,055,310...141,078,360
Ensembl chr 8:144,062,137...144,067,866 		JBrowse link
G MRE11 MRE11 homolog, double strand break repair nuclease involved_in IEA Ensembl GO_REF:0000107 NCBI chr11:89,418,537...89,500,705
Ensembl chr11:92,918,549...92,985,966 		JBrowse link
G NUDT16L1 nudix hydrolase 16 like 1 involved_in ISO (PMID:28241136) UniProt PMID:28241136 NCBI chr16:3,615,841...3,620,526
Ensembl chr16:4,785,358...4,786,775 		JBrowse link
negative regulation of double-strand break repair via single-strand annealing term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G OGG1 8-oxoguanine DNA glycosylase acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr 3:9,702,311...9,742,283
Ensembl chr 3:9,940,955...9,947,335 		JBrowse link
negative regulation of intrinsic apoptotic signaling pathway in response to DNA damage term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ACKR3 atypical chemokine receptor 3 involved_in IEA Ensembl GO_REF:0000107 NCBI chr2B:123,795,664...123,810,067
Ensembl chr2B:242,666,173...242,667,261 		JBrowse link
G ATAD5 ATPase family AAA domain containing 5 acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr17:25,944,259...26,009,317
Ensembl chr17:25,436,195...25,496,242 		JBrowse link
G BCL2L1 BCL2 like 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr20:27,955,688...28,015,950
Ensembl chr20:29,088,055...29,146,585 		JBrowse link
G BID BH3 interacting domain death agonist acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr22:1,164,787...1,205,051
Ensembl chr22:16,594,186...16,632,844 		JBrowse link
G CCAR2 cell cycle and apoptosis regulator 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 8:21,854,803...21,870,556
Ensembl chr 8:18,794,027...18,808,571 		JBrowse link
G CDKN2D cyclin dependent kinase inhibitor 2D involved_in ISO (PMID:15750620) BHF-UCL PMID:15750620 NCBI chr19:10,118,302...10,120,957 JBrowse link
G CLU clusterin involved_in IEA Ensembl GO_REF:0000107 NCBI chr 8:26,867,973...26,884,838
Ensembl chr 8:24,070,053...24,083,523 		JBrowse link
G CXCL12 C-X-C motif chemokine ligand 12 involved_in ISO (PMID:20388803) BHF-UCL PMID:20388803 NCBI chr10:41,296,975...41,384,864
Ensembl chr10:44,552,480...44,564,231 		JBrowse link
G DDIAS DNA damage induced apoptosis suppressor involved_in IEA Ensembl
InterPro		 GO_REF:0000002 GO_REF:0000107 NCBI chr11:77,967,057...77,999,829
Ensembl chr11:81,579,505...81,635,075 		JBrowse link
G LOC100973098 translationally-controlled tumor protein acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr 1:85,710,290...85,710,998
Ensembl chr 3:197,562,788...197,567,290 		JBrowse link
G SFRP2 secreted frizzled related protein 2 involved_in ISO (PMID:14561758) BHF-UCL PMID:14561758 NCBI chr 4:146,123,075...146,131,543
Ensembl chr 4:157,944,733...157,953,258 		JBrowse link
G SNAI1 snail family transcriptional repressor 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr20:46,321,075...46,328,865
Ensembl chr20:47,384,818...47,390,733 		JBrowse link
G SNAI2 snail family transcriptional repressor 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 8:45,341,857...45,345,544
Ensembl chr 8:42,723,971...42,730,904 		JBrowse link
G TMEM161A transmembrane protein 161A involved_in IEA Ensembl GO_REF:0000107 NCBI chr19:18,557,799...18,576,722
Ensembl chr19:19,560,046...19,578,779 		JBrowse link
G TPT1 tumor protein, translationally-controlled 1 acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr13:26,504,747...26,509,160
Ensembl chr 3:197,562,788...197,567,290 		JBrowse link
G TRIM32 tripartite motif containing 32 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 9:87,819,723...87,838,684
Ensembl chr 9:116,183,746...116,185,707 		JBrowse link
G USP47 ubiquitin specific peptidase 47 acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr11:12,009,770...12,127,425
Ensembl chr11:11,703,617...11,821,074 		JBrowse link
negative regulation of intrinsic apoptotic signaling pathway in response to DNA damage by p53 class mediator term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ATAD5 ATPase family AAA domain containing 5 involved_in IEA Ensembl GO_REF:0000107 NCBI chr17:25,944,259...26,009,317
Ensembl chr17:25,436,195...25,496,242 		JBrowse link
G BCL2L12 BCL2 like 12 acts_upstream_of_or_within ISO (PMID:20837658) MGI PMID:20837658 NCBI chr19:46,679,749...46,688,539 JBrowse link
G CD44 CD44 molecule (IN blood group) involved_in IEA Ensembl GO_REF:0000107 NCBI chr11:35,110,732...35,258,238
Ensembl chr11:34,985,634...35,079,009 		JBrowse link
G CD74 CD74 molecule involved_in IEA Ensembl
TreeGrafter		 GO_REF:0000107 GO_REF:0000118 NCBI chr 5:145,825,635...145,836,916
Ensembl chr 5:151,830,311...151,841,334 		JBrowse link
G ELL3 elongation factor for RNA polymerase II 3 acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr15:22,732,742...22,737,522
Ensembl chr15:40,821,759...40,827,070 		JBrowse link
G KDM1A lysine demethylase 1A involved_in IEA Ensembl GO_REF:0000107 NCBI chr 1:22,205,624...22,269,571
Ensembl chr 1:23,153,066...23,217,692 		JBrowse link
G MARCHF7 membrane associated ring-CH-type finger 7 involved_in IEA Ensembl GO_REF:0000107 NCBI chr2B:47,004,211...47,059,901
Ensembl chr2B:164,377,605...164,432,907 		JBrowse link
G MIF macrophage migration inhibitory factor involved_in IEA Ensembl GO_REF:0000107 NCBI chr22:4,646,986...4,647,831
Ensembl chr22:22,730,807...22,732,009 		JBrowse link
G MUC1 mucin 1, cell surface associated involved_in ISO (PMID:15710329) BHF-UCL PMID:15710329 NCBI chr 1:130,533,508...130,537,866
Ensembl chr 1:134,141,969...134,145,850 		JBrowse link
G SIRT1 sirtuin 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr10:64,368,878...64,401,684
Ensembl chr10:66,681,598...66,715,069 		JBrowse link
G TRIAP1 TP53 regulated inhibitor of apoptosis 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr12:118,025,599...118,028,045
Ensembl chr12:121,400,063...121,402,506 		JBrowse link
G ZNF385A zinc finger protein 385A involved_in IEA Ensembl GO_REF:0000107 NCBI chr12:34,353,975...34,376,172
Ensembl chr12:35,080,820...35,102,248 		JBrowse link
negative regulation of mitotic DNA damage checkpoint term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G PPP1R10 protein phosphatase 1 regulatory subunit 10 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 6:30,342,669...30,359,644
Ensembl chr 6:31,212,522...31,229,697 		JBrowse link
negative regulation of protection from non-homologous end joining at telomere term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ERCC1 ERCC excision repair 1, endonuclease non-catalytic subunit involved_in IEA Ensembl GO_REF:0000107 NCBI chr19:42,356,039...42,427,754
Ensembl chr19:50,951,674...50,968,430 		JBrowse link
G ERCC4 ERCC excision repair 4, endonuclease catalytic subunit involved_in IEA Ensembl GO_REF:0000107 NCBI chr16:12,848,334...12,880,480
Ensembl chr16:14,272,417...14,304,496 		JBrowse link
G XRCC1 X-ray repair cross complementing 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr19:40,485,052...40,522,188
Ensembl chr19:49,094,014...49,125,520 		JBrowse link
G XRCC4 X-ray repair cross complementing 4 involved_in ISO (PMID:14690602) BHF-UCL PMID:14690602 NCBI chr 5:31,927,463...32,202,394
Ensembl chr 5:32,246,320...32,521,490 		JBrowse link
negative regulation of telomere maintenance in response to DNA damage term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G RTEL1 regulator of telomere elongation helicase 1 involved_in ISO (PMID:22579284) BHF-UCL PMID:22579284 Ensembl chr20:61,581,331...61,618,718 JBrowse link
nucleotide-excision repair term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G BIVM basic, immunoglobulin-like variable motif containing involved_in IEA InterPro GO_REF:0000002 NCBI chr13:83,959,365...84,002,223
Ensembl chr13:103,096,344...103,174,182 		JBrowse link
G BRCA2 BRCA2 DNA repair associated involved_in IEA Ensembl GO_REF:0000107 NCBI chr13:13,574,422...13,658,967
Ensembl chr13:32,010,066...32,091,332 		JBrowse link
G BRIP1 BRCA1 interacting DNA helicase 1 involved_in IEA TreeGrafter GO_REF:0000118 NCBI chr17:55,786,568...55,973,366
Ensembl chr17:60,901,073...61,083,462 		JBrowse link
G CETN2 centrin 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chr  X:142,401,679...142,405,206
Ensembl chr  X:152,320,893...152,324,362 		JBrowse link
G COMMD1 copper metabolism domain containing 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr2A:61,970,830...62,216,677
Ensembl chr2A:63,121,521...63,349,131 		JBrowse link
G DCLRE1A DNA cross-link repair 1A acts_upstream_of_or_within ISO (PMID:10848582) MGI PMID:10848582 NCBI chr10:110,433,735...110,453,565
Ensembl chr10:113,866,759...113,886,141 		JBrowse link
G DDB2 damage specific DNA binding protein 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chr11:47,161,345...47,185,526
Ensembl chr11:47,714,723...47,738,761 		JBrowse link
G ERCC1 ERCC excision repair 1, endonuclease non-catalytic subunit acts_upstream_of_or_within
involved_in		 IEA
ISO		 (PMID:7657672)
(PMID:22547097)		 Ensembl
UniProt
ComplexPortal		 PMID:7657672 PMID:22547097 GO_REF:0000107 NCBI chr19:42,356,039...42,427,754
Ensembl chr19:50,951,674...50,968,430 		JBrowse link
G ERCC2 ERCC excision repair 2, TFIIH core complex helicase subunit involved_in
acts_upstream_of_or_within		 IEA InterPro
Ensembl		 GO_REF:0000002 GO_REF:0000107 NCBI chr19:42,298,927...42,319,816
Ensembl chr19:50,897,004...50,915,819 		JBrowse link
G ERCC3 ERCC excision repair 3, TFIIH core complex helicase subunit involved_in IEA Ensembl
InterPro		 GO_REF:0000002 GO_REF:0000107 NCBI chr2B:32,983,492...33,020,492
Ensembl chr2B:127,922,483...127,959,372 		JBrowse link
G ERCC4 ERCC excision repair 4, endonuclease catalytic subunit acts_upstream_of_or_within
involved_in		 IEA
ISO		 (PMID:11790111), (PMID:14728600), (PMID:8797827)
(PMID:10413517), (PMID:22547097), (PMID:32034146)		 Ensembl
UniProt		 PMID:8797827 PMID:10413517 PMID:11790111 PMID:14728600 PMID:22547097 More... GO_REF:0000107 NCBI chr16:12,848,334...12,880,480
Ensembl chr16:14,272,417...14,304,496 		JBrowse link
G ERCC5 ERCC excision repair 5, endonuclease involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:10022922) InterPro
MGI		 PMID:10022922 GO_REF:0000002 NCBI chr13:84,005,950...84,036,710
Ensembl chr13:103,096,344...103,174,182 		JBrowse link
G FAN1 FANCD2 and FANCI associated nuclease 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr15:9,395,348...9,435,434
Ensembl chr15:28,433,749...28,473,211 		JBrowse link
G FANCC FA complementation group C acts_upstream_of_or_within
involved_in		 ISO
IEA		 (PMID:8704201) MGI
TreeGrafter		 PMID:8704201 GO_REF:0000118 NCBI chr 9:66,201,581...66,418,229
Ensembl chr 9:94,329,971...94,477,198 		JBrowse link
G GTF2H1 general transcription factor IIH subunit 1 involved_in IEA InterPro GO_REF:0000002 NCBI chr11:18,357,594...18,402,268
Ensembl chr11:18,042,824...18,086,898 		JBrowse link
G GTF2H3 general transcription factor IIH subunit 3 involved_in IEA InterPro
TreeGrafter
UniProt		 GO_REF:0000002 GO_REF:0000104 GO_REF:0000118 NCBI chr12:121,218,813...121,246,807
Ensembl chr12:125,445,381...125,473,763 		JBrowse link
G GTF2H4 general transcription factor IIH subunit 4 involved_in IEA InterPro
TreeGrafter		 GO_REF:0000002 GO_REF:0000118 NCBI chr 6:30,653,398...30,659,316
Ensembl chr 6:31,521,501...31,527,456 		JBrowse link
G GTF2H5 general transcription factor IIH subunit 5 involved_in
acts_upstream_of_or_within		 IEA InterPro
Ensembl		 GO_REF:0000002 GO_REF:0000107 Ensembl chr 6:158,126,665...158,153,663 JBrowse link
G HUS1 HUS1 checkpoint clamp component involved_in IEA TreeGrafter GO_REF:0000118 NCBI chr 7:48,606,848...48,622,194
Ensembl chr 7:48,714,668...48,731,005 		JBrowse link
G HUS1B HUS1 checkpoint clamp component B involved_in IEA TreeGrafter GO_REF:0000118 NCBI chr 6:466,508...469,590
Ensembl chr 6:601,288...602,124 		JBrowse link
G KAT5 lysine acetyltransferase 5 involved_in IEA Ensembl GO_REF:0000107 NCBI chr11:61,071,118...61,078,667
Ensembl chr11:64,404,572...64,412,667 		JBrowse link
G LOC100987487 general transcription factor IIH subunit 2 involved_in IEA UniProt
TreeGrafter
InterPro		 GO_REF:0000002 GO_REF:0000104 GO_REF:0000118 NCBI chr 5:44,412,653...44,445,158 JBrowse link
G MNAT1 MNAT1 component of CDK activating kinase involved_in IEA InterPro GO_REF:0000002 NCBI chr14:41,342,530...41,576,690
Ensembl chr14:59,603,209...59,835,408 		JBrowse link
G NTHL1 nth like DNA glycosylase 1 involved_in IEA Ensembl
TreeGrafter		 GO_REF:0000107 GO_REF:0000118 NCBI chr16:655,433...663,521
Ensembl chr16:2,127,858...2,135,656 		JBrowse link
G OGG1 8-oxoguanine DNA glycosylase involved_in
acts_upstream_of_or_within		 IEA InterPro
Ensembl		 GO_REF:0000002 GO_REF:0000107 NCBI chr 3:9,702,311...9,742,283
Ensembl chr 3:9,940,955...9,947,335 		JBrowse link
G POLA1 DNA polymerase alpha 1, catalytic subunit NOT|involved_in ISO (PMID:1508673) UniProt PMID:1508673 NCBI chr  X:17,290,805...17,592,163
Ensembl chr  X:24,657,878...24,960,231 		JBrowse link
G POLL DNA polymerase lambda involved_in IEA Ensembl GO_REF:0000107 NCBI chr10:98,181,049...98,190,463
Ensembl chr10:101,653,978...101,663,360 		JBrowse link
G RAD23A RAD23 homolog A, nucleotide excision repair protein involved_in IEA Ensembl
InterPro
UniProt		 GO_REF:0000002 GO_REF:0000104 GO_REF:0000107 NCBI chr19:12,508,232...12,516,068
Ensembl chr19:13,250,718...13,258,482 		JBrowse link
G RAD23B RAD23 homolog B, nucleotide excision repair protein involved_in IEA UniProt
InterPro
Ensembl		 GO_REF:0000002 GO_REF:0000104 GO_REF:0000107 NCBI chr 9:78,433,461...78,482,157
Ensembl chr 9:106,622,377...106,670,317 		JBrowse link
G RPA1 replication protein A1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr17:1,813,610...1,886,093
Ensembl chr17:1,705,380...1,775,596 		JBrowse link
G RPA2 replication protein A2 involved_in IEA Ensembl
TreeGrafter		 GO_REF:0000107 GO_REF:0000118 NCBI chr 1:27,151,784...27,175,110
Ensembl chr 1:28,191,731...28,214,666 		JBrowse link
G RPA3 replication protein A3 involved_in IEA Ensembl
TreeGrafter		 GO_REF:0000107 GO_REF:0000118 NCBI chr 7:8,361,623...8,365,098
Ensembl chr 7:7,713,629...7,717,169 		JBrowse link
G RPA4 replication protein A4 involved_in ISO (PMID:19996105) UniProt PMID:19996105 NCBI chr  X:86,114,330...86,116,687 JBrowse link
G SLX4 SLX4 structure-specific endonuclease subunit involved_in IEA Ensembl GO_REF:0000107 NCBI chr16:2,502,334...2,532,172
Ensembl chr16:3,678,018...3,707,842 		JBrowse link
G TP53 tumor protein p53 involved_in IEA Ensembl GO_REF:0000107 NCBI chr17:7,699,449...7,717,812
Ensembl chr17:7,684,922...7,706,120 		JBrowse link
G XPA XPA, DNA damage recognition and repair factor involved_in
acts_upstream_of_or_within		 IEA InterPro
Ensembl		 GO_REF:0000002 GO_REF:0000107 NCBI chr 9:68,726,723...68,788,049
Ensembl chr 9:96,886,795...96,909,254 		JBrowse link
G XPC XPC complex subunit, DNA damage recognition and repair factor involved_in
acts_upstream_of_or_within		 IEA InterPro
Ensembl
TreeGrafter		 GO_REF:0000002 GO_REF:0000107 GO_REF:0000118 NCBI chr 3:14,063,499...14,097,023
Ensembl chr 3:14,403,958...14,437,377 		JBrowse link
nucleotide-excision repair involved in interstrand cross-link repair term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ERCC4 ERCC excision repair 4, endonuclease catalytic subunit involved_in IEA Ensembl
TreeGrafter		 GO_REF:0000107 GO_REF:0000118 NCBI chr16:12,848,334...12,880,480
Ensembl chr16:14,272,417...14,304,496 		JBrowse link
G XPA XPA, DNA damage recognition and repair factor involved_in IEA TreeGrafter GO_REF:0000118 NCBI chr 9:68,726,723...68,788,049
Ensembl chr 9:96,886,795...96,909,254 		JBrowse link
nucleotide-excision repair, DNA damage recognition term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G XPA XPA, DNA damage recognition and repair factor involved_in IEA TreeGrafter GO_REF:0000118 NCBI chr 9:68,726,723...68,788,049
Ensembl chr 9:96,886,795...96,909,254 		JBrowse link
nucleotide-excision repair, DNA gap filling term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G LIG4 DNA ligase 4 involved_in IEA Ensembl
TreeGrafter		 GO_REF:0000107 GO_REF:0000118 NCBI chr13:89,336,434...89,347,418
Ensembl chr13:108,475,820...108,478,555 		JBrowse link
G POLB DNA polymerase beta NOT|involved_in ISO (PMID:20227374) UniProt PMID:20227374 NCBI chr 8:41,582,370...41,615,950
Ensembl chr 8:39,026,991...39,060,464 		JBrowse link
G POLD1 DNA polymerase delta 1, catalytic subunit involved_in IEA Ensembl
TreeGrafter		 GO_REF:0000107 GO_REF:0000118 NCBI chr19:47,347,919...47,381,772
Ensembl chr19:56,251,356...56,297,611 		JBrowse link
G POLD3 DNA polymerase delta 3, accessory subunit involved_in IEA Ensembl
TreeGrafter		 GO_REF:0000107 GO_REF:0000118 NCBI chr11:69,665,642...69,715,879
Ensembl chr11:72,969,844...73,018,295 		JBrowse link
G POLE DNA polymerase epsilon, catalytic subunit involved_in IEA Ensembl
TreeGrafter		 GO_REF:0000107 GO_REF:0000118 NCBI chr12:129,975,750...130,038,402
Ensembl chr12:134,695,976...134,758,650 		JBrowse link
G POLK DNA polymerase kappa involved_in IEA Ensembl GO_REF:0000107 NCBI chr 5:39,700,659...39,788,727
Ensembl chr 5:40,311,526...40,401,003 		JBrowse link
G SPIB Spi-B transcription factor involved_in IEA TreeGrafter GO_REF:0000118 NCBI chr19:47,382,653...47,395,178
Ensembl chr19:56,251,356...56,297,611 		JBrowse link
nucleotide-excision repair, preincision complex assembly term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G GTF2H5 general transcription factor IIH subunit 5 acts_upstream_of_or_within
involved_in		 ISO
IEA		 (PMID:23637614) MGI
TreeGrafter		 PMID:23637614 GO_REF:0000118 Ensembl chr 6:158,126,665...158,153,663 JBrowse link
photoreactive repair term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G CRY2 cryptochrome circadian regulator 2 NOT|involved_in ISO (PMID:12627958) UniProt PMID:12627958 NCBI chr11:45,801,504...45,837,357
Ensembl chr11:46,293,717...46,329,759 		JBrowse link
positive regulation of base-excision repair term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G FAM168A family with sequence similarity 168 member A involved_in IEA Ensembl GO_REF:0000107 NCBI chr11:68,477,579...68,674,428
Ensembl chr11:71,698,901...71,766,921 		JBrowse link
G RPS3 ribosomal protein S3 involved_in ISO (PMID:18973764) UniProt PMID:18973764 NCBI chr11:70,460,702...70,466,909
Ensembl chr11:73,762,794...73,768,982 		JBrowse link
positive regulation of DNA damage checkpoint term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G CCAR2 cell cycle and apoptosis regulator 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 8:21,854,803...21,870,556
Ensembl chr 8:18,794,027...18,808,571 		JBrowse link
G TTI1 TELO2 interacting protein 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr20:34,304,137...34,354,615
Ensembl chr20:35,417,502...35,467,918 		JBrowse link
positive regulation of DNA damage response, signal transduction by p53 class mediator term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ANKRD1 ankyrin repeat domain 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr10:87,652,254...87,661,173
Ensembl chr10:91,180,034...91,188,165 		JBrowse link
G ATM ATM serine/threonine kinase involved_in IEA Ensembl GO_REF:0000107 NCBI chr11:103,109,979...103,256,405
Ensembl chr11:106,584,228...106,727,041 		JBrowse link
G ATR ATR serine/threonine kinase involved_in IEA Ensembl GO_REF:0000107 NCBI chr 3:139,482,606...139,612,274
Ensembl chr 3:147,075,185...147,196,261 		JBrowse link
G CDKN2A cyclin dependent kinase inhibitor 2A involved_in ISO (PMID:9529249) BHF-UCL PMID:9529249 NCBI chr 9:21,803,862...21,831,322 JBrowse link
G DDX5 DEAD-box helicase 5 involved_in IEA Ensembl GO_REF:0000107 NCBI chr17:58,594,956...58,603,570
Ensembl chr17:63,689,082...63,696,142 		JBrowse link
G EEF1E1 eukaryotic translation elongation factor 1 epsilon 1 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:15680327) InterPro
MGI
Ensembl		 PMID:15680327 GO_REF:0000002 GO_REF:0000107 NCBI chr 6:7,911,807...7,940,918
Ensembl chr 6:8,192,997...8,222,056 		JBrowse link
G HIC1 HIC ZBTB transcriptional repressor 1 involved_in ISO (PMID:16269335) UniProt PMID:16269335 NCBI chr17:2,045,960...2,051,483 JBrowse link
G ING4 inhibitor of growth family member 4 involved_in IEA Ensembl GO_REF:0000107 NCBI chr12:6,782,402...6,795,035
Ensembl chr12:6,698,843...6,710,955 		JBrowse link
G LOC100979315 phorbol-12-myristate-13-acetate-induced protein 1 involved_in ISO (PMID:15102863)
(PMID:14500851)		 UniProt PMID:14500851 PMID:15102863 NCBI chr18:53,286,590...53,290,913
Ensembl chr18:56,611,098...56,615,449 		JBrowse link
G PLA2R1 phospholipase A2 receptor 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr2B:47,226,791...47,355,831
Ensembl chr2B:164,605,440...164,726,017 		JBrowse link
G PYHIN1 pyrin and HIN domain family member 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 1:134,283,998...134,329,531
Ensembl chr 1:138,081,611...138,127,115 		JBrowse link
G RPL26 ribosomal protein L26 involved_in ISO (PMID:16213212) CAFA PMID:16213212 NCBI chr17:43,274,839...43,282,606
Ensembl chr17:48,009,198...48,015,977 		JBrowse link
G SPRED1 sprouty related EVH1 domain containing 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr15:17,182,976...17,286,566
Ensembl chr15:35,439,762...35,536,565 		JBrowse link
G SPRED2 sprouty related EVH1 domain containing 2 involved_in ISO (PMID:20736167) BHF-UCL PMID:20736167 NCBI chr2A:65,380,608...65,503,139
Ensembl chr2A:66,503,260...66,624,840 		JBrowse link
G ZNF385A zinc finger protein 385A involved_in IEA Ensembl GO_REF:0000107 NCBI chr12:34,353,975...34,376,172
Ensembl chr12:35,080,820...35,102,248 		JBrowse link
G ZNHIT1 zinc finger HIT-type containing 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 7:93,359,038...93,365,521
Ensembl chr 7:106,599,579...106,606,157 		JBrowse link
positive regulation of DNA repair term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ABRAXAS1 abraxas 1, BRCA1 A complex subunit involved_in IEA Ensembl GO_REF:0000107 NCBI chr 4:40,711,139...40,736,763
Ensembl chr 4:46,556,892...46,581,573 		JBrowse link
G ACTL6A actin like 6A involved_in IEA Ensembl GO_REF:0000107 NCBI chr 3:176,595,149...176,620,556
Ensembl chr 3:184,765,523...184,790,983 		JBrowse link
G ACTR5 actin related protein 5 involved_in ISO (PMID:23979016) ComplexPortal PMID:23979016 NCBI chr20:35,073,297...35,097,955
Ensembl chr20:36,181,343...36,204,996 		JBrowse link
G ACTR8 actin related protein 8 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 3:53,802,916...53,820,244
Ensembl chr 3:55,027,468...55,041,182 		JBrowse link
G APBB1 amyloid beta precursor protein binding family B member 1 involved_in ISO (PMID:17121854) UniProt PMID:17121854 NCBI chr11:6,526,477...6,550,509
Ensembl chr11:6,209,812...6,225,972 		JBrowse link
G BABAM1 BRISC and BRCA1 A complex member 1 involved_in IEA InterPro
Ensembl		 GO_REF:0000002 GO_REF:0000107 NCBI chr19:16,755,518...16,767,634
Ensembl chr19:17,729,568...17,742,447 		JBrowse link
G BABAM2 BRISC and BRCA1 A complex member 2 involved_in IEA Ensembl
UniProt		 GO_REF:0000104 GO_REF:0000107 NCBI chr2A:27,884,907...28,338,302
Ensembl chr2A:27,974,917...28,420,519 		JBrowse link
G BRCA1 BRCA1 DNA repair associated involved_in IEA Ensembl GO_REF:0000107 NCBI chr17:14,197,946...14,279,064
Ensembl chr17:14,428,526...14,506,815 		JBrowse link
G BRCC3 BRCA1/BRCA2-containing complex subunit 3 involved_in IEA UniProt
Ensembl		 GO_REF:0000104 GO_REF:0000107 NCBI chr  X:144,550,320...144,592,795
Ensembl chr  X:154,389,283...154,428,669 		JBrowse link
G CBX8 chromobox 8 ISO RGD PMID:23572236 RGD:9586727 NCBI chr17:73,874,618...73,877,347
Ensembl chr17:79,410,967...79,413,691 		JBrowse link
G CCDC117 coiled-coil domain containing 117 involved_in IEA Ensembl GO_REF:0000107 NCBI chr22:9,841,876...9,891,088
Ensembl chr22:27,544,719...27,561,144 		JBrowse link
G CEBPG CCAAT enhancer binding protein gamma involved_in IEA Ensembl GO_REF:0000107 NCBI chr19:30,295,603...30,304,984
Ensembl chr19:39,046,219...39,046,671 		JBrowse link
G DHX9 DExH-box helicase 9 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 1:158,355,472...158,404,178
Ensembl chr 1:162,006,822...162,055,833 		JBrowse link
G EGFR epidermal growth factor receptor involved_in IEA Ensembl GO_REF:0000107 NCBI chr 7:55,614,042...55,807,285
Ensembl chr 7:56,046,296...56,111,615 		JBrowse link
G ERCC6 ERCC excision repair 6, chromatin remodeling factor involved_in IEA Ensembl GO_REF:0000107 NCBI chr10:44,703,720...44,784,948 JBrowse link
G ERCC8 ERCC excision repair 8, CSA ubiquitin ligase complex subunit involved_in ISO (PMID:7664335) UniProt PMID:7664335 NCBI chr 5:53,053,712...53,131,563
Ensembl chr 5:54,693,987...54,765,496 		JBrowse link
G EYA1 EYA transcriptional coactivator and phosphatase 1 involved_in IEA Ensembl
TreeGrafter		 GO_REF:0000107 GO_REF:0000118 NCBI chr 8:67,728,057...68,060,069
Ensembl chr 8:69,387,769...69,551,829 		JBrowse link
G EYA2 EYA transcriptional coactivator and phosphatase 2 involved_in IEA TreeGrafter GO_REF:0000118 NCBI chr20:43,226,621...43,520,301
Ensembl chr20:44,310,451...44,607,468 		JBrowse link
G EYA3 EYA transcriptional coactivator and phosphatase 3 involved_in IEA Ensembl
TreeGrafter		 GO_REF:0000107 GO_REF:0000118 NCBI chr 1:27,230,623...27,349,355
Ensembl chr 1:28,270,116...28,386,878 		JBrowse link
G EYA4 EYA transcriptional coactivator and phosphatase 4 involved_in IEA TreeGrafter GO_REF:0000118 NCBI chr 6:131,016,143...131,306,251
Ensembl chr 6:135,116,978...135,404,403 		JBrowse link
G FGF10 fibroblast growth factor 10 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 5:65,979,443...66,069,314
Ensembl chr 5:71,028,187...71,111,706 		JBrowse link
G INO80 INO80 complex ATPase subunit involved_in IEA Ensembl GO_REF:0000107 NCBI chr15:19,920,980...20,058,117
Ensembl chr15:38,170,982...38,307,311 		JBrowse link
G INO80B INO80 complex subunit B involved_in ISO (PMID:23979016) ComplexPortal PMID:23979016 NCBI chr2A:74,521,624...74,524,578
Ensembl chr2A:76,027,621...76,030,549 		JBrowse link
G INO80C INO80 complex subunit C involved_in IEA Ensembl GO_REF:0000107 NCBI chr18:28,686,112...28,715,946
Ensembl chr18:32,260,924...32,304,152 		JBrowse link
G INO80D INO80 complex subunit D involved_in IEA Ensembl GO_REF:0000107 NCBI chr2B:93,233,672...93,325,871
Ensembl chr2B:211,373,993...211,433,124 		JBrowse link
G MCRS1 microspherule protein 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr12:39,183,112...39,192,925
Ensembl chr12:40,073,860...40,083,655 		JBrowse link
G MGMT O-6-methylguanine-DNA methyltransferase ISO RGD PMID:1945835 RGD:729332 NCBI chr10:126,059,701...126,365,850
Ensembl chr10:130,305,485...130,609,422 		JBrowse link
G NFRKB nuclear factor related to kappaB binding protein involved_in IEA Ensembl GO_REF:0000107 NCBI chr11:124,676,456...124,708,349
Ensembl chr11:128,572,240...128,601,779 		JBrowse link
G NPAS2 neuronal PAS domain protein 2 involved_in IEA Ensembl GO_REF:0000107 Ensembl chr2A:101,868,933...101,972,866 JBrowse link
G PARG poly(ADP-ribose) glycohydrolase ISO RGD PMID:15158362 RGD:2316739 NCBI chr10:44,290,391...44,420,184 JBrowse link
G PCNA proliferating cell nuclear antigen involved_in IEA Ensembl GO_REF:0000107 NCBI chr20:5,134,930...5,146,603
Ensembl chr20:4,927,731...4,939,440 		JBrowse link
G RNF168 ring finger protein 168 involved_in IEA Ensembl
UniProt		 GO_REF:0000104 GO_REF:0000107 NCBI chr 3:193,814,785...193,848,620
Ensembl chr 3:203,756,589...203,790,687 		JBrowse link
G RNF8 ring finger protein 8 involved_in IEA Ensembl
UniProt		 GO_REF:0000104 GO_REF:0000107 NCBI chr 6:36,918,705...36,955,380
Ensembl chr 6:38,108,414...38,145,949 		JBrowse link
G RPS3 ribosomal protein S3 involved_in ISO (PMID:23911537) UniProt PMID:23911537 NCBI chr11:70,460,702...70,466,909
Ensembl chr11:73,762,794...73,768,982 		JBrowse link
G RUVBL1 RuvB like AAA ATPase 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 3:125,120,524...125,200,859
Ensembl chr 3:132,486,229...132,528,918 		JBrowse link
G RUVBL2 RuvB like AAA ATPase 2 involved_in ISO (PMID:23979016) ComplexPortal PMID:23979016 NCBI chr19:45,995,394...46,017,835
Ensembl chr19:54,739,474...54,761,407 		JBrowse link
G SIRT1 sirtuin 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr10:64,368,878...64,401,684
Ensembl chr10:66,681,598...66,715,069 		JBrowse link
G SMCHD1 structural maintenance of chromosomes flexible hinge domain containing 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr18:11,479,742...11,627,035
Ensembl chr18:13,785,912...13,933,887 		JBrowse link
G TFPT TCF3 fusion partner involved_in IEA Ensembl GO_REF:0000107 NCBI chr19:51,039,142...51,048,346
Ensembl chr19:59,879,141...59,891,335 		JBrowse link
G TIGAR TP53 induced glycolysis regulatory phosphatase involved_in IEA Ensembl GO_REF:0000107 NCBI chr12:4,429,945...4,462,142
Ensembl chr12:4,353,272...4,385,380 		JBrowse link
G TMEM161A transmembrane protein 161A involved_in IEA Ensembl GO_REF:0000107 NCBI chr19:18,557,799...18,576,722
Ensembl chr19:19,560,046...19,578,779 		JBrowse link
G TRIM28 tripartite motif containing 28 involved_in IEA Ensembl GO_REF:0000107 NCBI chr19:55,557,130...55,563,802
Ensembl chr19:64,371,477...64,377,144 		JBrowse link
G UBE2N ubiquitin conjugating enzyme E2 N involved_in ISO (PMID:16129784) HGNC-UCL PMID:16129784 NCBI chr12:90,951,446...90,984,075 JBrowse link
G UBE2V2 ubiquitin conjugating enzyme E2 V2 ISO RGD PMID:12750002 RGD:1299567 NCBI chr 8:44,435,496...44,488,517
Ensembl chr 8:41,856,429...41,878,320 		JBrowse link
G UCHL5 ubiquitin C-terminal hydrolase L5 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 1:168,471,501...168,519,366
Ensembl chr 1:172,764,606...172,811,880 		JBrowse link
G UIMC1 ubiquitin interaction motif containing 1 involved_in IEA Ensembl
TreeGrafter		 GO_REF:0000107 GO_REF:0000118 NCBI chr 5:172,205,958...172,321,758
Ensembl chr 5:179,271,577...179,374,229 		JBrowse link
G WRAP53 WD repeat containing antisense to TP53 involved_in IEA Ensembl GO_REF:0000107 NCBI chr17:7,715,897...7,735,873
Ensembl chr17:7,707,221...7,723,394 		JBrowse link
G YY1 YY1 transcription factor involved_in ISO (PMID:23979016) ComplexPortal PMID:23979016 NCBI chr14:80,859,491...80,903,651 JBrowse link
positive regulation of double-strand break repair term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G AGER advanced glycosylation end-product specific receptor involved_in IEA Ensembl GO_REF:0000107 NCBI chr 6:31,828,363...31,831,981
Ensembl chr 6:32,708,251...32,711,641 		JBrowse link
G ATM ATM serine/threonine kinase involved_in IEA Ensembl GO_REF:0000107 NCBI chr11:103,109,979...103,256,405
Ensembl chr11:106,584,228...106,727,041 		JBrowse link
G DDX11 DEAD/H-box helicase 11 involved_in ISO (PMID:23797032) UniProt PMID:23797032 NCBI chr12:55,176,165...55,207,123 JBrowse link
G FMN2 formin 2 involved_in ISO (PMID:26287480) UniProt PMID:26287480 NCBI chr 1:215,626,889...216,023,590 JBrowse link
G FOXM1 forkhead box M1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr12:2,978,400...2,999,077
Ensembl chr12:2,910,028...2,930,503 		JBrowse link
G KHDC3L KH domain containing 3 like, subcortical maternal complex member involved_in ISO (PMID:29125140), (PMID:33115731) UniProt PMID:29125140 PMID:33115731 NCBI chr 6:71,089,817...71,190,700
Ensembl chr 6:74,478,303...74,479,826 		JBrowse link
G MGMT O-6-methylguanine-DNA methyltransferase involved_in IEA Ensembl GO_REF:0000107 NCBI chr10:126,059,701...126,365,850
Ensembl chr10:130,305,485...130,609,422 		JBrowse link
G MRE11 MRE11 homolog, double strand break repair nuclease involved_in IEA Ensembl GO_REF:0000107 NCBI chr11:89,418,537...89,500,705
Ensembl chr11:92,918,549...92,985,966 		JBrowse link
G NBN nibrin involved_in IEA Ensembl GO_REF:0000107 NCBI chr 8:86,622,797...86,674,202
Ensembl chr 8:88,575,198...88,626,307 		JBrowse link
G OOEP oocyte expressed protein involved_in ISO (PMID:29125140) UniProt PMID:29125140 NCBI chr 6:71,195,619...71,197,040
Ensembl chr 6:74,484,764...74,511,331 		JBrowse link
G RAD50 RAD50 double strand break repair protein involved_in IEA Ensembl GO_REF:0000107 NCBI chr 5:127,972,630...128,059,911
Ensembl chr 5:134,134,495...134,222,261 		JBrowse link
G SIRT1 sirtuin 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr10:64,368,878...64,401,684
Ensembl chr10:66,681,598...66,715,069 		JBrowse link
G SIRT6 sirtuin 6 involved_in IEA Ensembl GO_REF:0000107 NCBI chr19:3,196,092...3,204,602
Ensembl chr19:4,146,057...4,154,126 		JBrowse link
G SLF1 SMC5-SMC6 complex localization factor 1 involved_in IEA InterPro
Ensembl		 GO_REF:0000002 GO_REF:0000107 NCBI chr 5:20,660,101...20,757,072
Ensembl chr 5:20,817,614...20,884,453 		JBrowse link
G SLF2 SMC5-SMC6 complex localization factor 2 involved_in IEA Ensembl
TreeGrafter		 GO_REF:0000107 GO_REF:0000118 NCBI chr10:97,511,398...97,566,386
Ensembl chr10:100,989,044...101,042,730 		JBrowse link
G SPIDR scaffold protein involved in DNA repair involved_in IEA Ensembl GO_REF:0000107 NCBI chr 8:43,691,454...44,166,259
Ensembl chr 8:41,083,964...41,558,170 		JBrowse link
G SPIRE1 spire type actin nucleation factor 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr18:1,663,614...1,881,357
Ensembl chr18:16,800,870...16,992,959 		JBrowse link
G SPIRE2 spire type actin nucleation factor 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chr16:70,580,030...70,634,143
Ensembl chr16:90,273,160...90,299,061 		JBrowse link
G TIMELESS timeless circadian regulator involved_in IEA Ensembl GO_REF:0000107 NCBI chr12:32,465,529...32,497,581
Ensembl chr12:32,718,649...32,750,728 		JBrowse link
G UBE2N ubiquitin conjugating enzyme E2 N involved_in ISO (PMID:16129784) ComplexPortal PMID:16129784 NCBI chr12:90,951,446...90,984,075 JBrowse link
G UBE2V2 ubiquitin conjugating enzyme E2 V2 involved_in ISO (PMID:16129784) ComplexPortal PMID:16129784 NCBI chr 8:44,435,496...44,488,517
Ensembl chr 8:41,856,429...41,878,320 		JBrowse link
G WRAP53 WD repeat containing antisense to TP53 involved_in IEA Ensembl GO_REF:0000107 NCBI chr17:7,715,897...7,735,873
Ensembl chr17:7,707,221...7,723,394 		JBrowse link
G ZCWPW1 zinc finger CW-type and PWWP domain containing 1 involved_in ISO (PMID:31453335), (PMID:32352380), (PMID:32374261), (PMID:32744506) ARUK-UCL PMID:31453335 PMID:32352380 PMID:32374261 PMID:32744506 NCBI chr 7:92,429,776...92,457,943
Ensembl chr 7:105,832,031...105,859,995 		JBrowse link
positive regulation of double-strand break repair via homologous recombination term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ACTB actin beta involved_in ISO (PMID:27153538) ComplexPortal PMID:27153538
G ACTL6A actin like 6A involved_in IEA Ensembl GO_REF:0000107 NCBI chr 3:176,595,149...176,620,556
Ensembl chr 3:184,765,523...184,790,983 		JBrowse link
G ACTR2 actin related protein 2 involved_in ISO (PMID:29925947) UniProt PMID:29925947 NCBI chr2A:65,289,675...65,333,219
Ensembl chr2A:66,413,011...66,456,857 		JBrowse link
G ARID2 AT-rich interaction domain 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chr12:42,823,236...43,004,465
Ensembl chr12:43,692,914...43,871,564 		JBrowse link
G BLM BLM RecQ like helicase acts_upstream_of_or_within ISO (PMID:25520194) MGI PMID:25520194 NCBI chr15:69,407,248...69,508,070
Ensembl chr15:88,607,157...88,707,864 		JBrowse link
G BRD8 bromodomain containing 8 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 5:133,535,321...133,557,304
Ensembl chr 5:139,652,112...139,690,468 		JBrowse link
G CREBBP CREB binding protein involved_in IEA Ensembl GO_REF:0000107 NCBI chr16:2,645,445...2,800,975
Ensembl chr16:3,820,519...3,974,206 		JBrowse link
G DMAP1 DNA methyltransferase 1 associated protein 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 1:43,516,839...43,524,206
Ensembl chr 1:44,886,307...44,893,598 		JBrowse link
G EPC1 enhancer of polycomb homolog 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr10:32,398,557...32,509,146
Ensembl chr10:32,985,456...33,095,070 		JBrowse link
G EPC2 enhancer of polycomb homolog 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chr2B:11,074,397...11,218,181
Ensembl chr2B:153,005,176...153,148,644 		JBrowse link
G ERCC6 ERCC excision repair 6, chromatin remodeling factor involved_in IEA Ensembl GO_REF:0000107 NCBI chr10:44,703,720...44,784,948 JBrowse link
G FANCB FA complementation group B acts_upstream_of_or_within
involved_in		 ISO
IEA		 (PMID:25520194) MGI
TreeGrafter		 PMID:25520194 GO_REF:0000118 NCBI chr  X:7,470,574...7,500,958
Ensembl chr  X:14,752,934...14,781,817 		JBrowse link
G FUS FUS RNA binding protein involved_in IEA Ensembl GO_REF:0000107 NCBI chr16:23,775,389...23,786,881
Ensembl chr16:31,551,135...31,562,327 		JBrowse link
G HDGFL2 HDGF like 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chr19:3,489,986...3,521,935
Ensembl chr19:4,440,491...4,471,212 		JBrowse link
G HELQ helicase, POLQ like involved_in IEA Ensembl GO_REF:0000107 NCBI chr 4:40,740,392...40,788,907
Ensembl chr 4:46,586,882...46,635,108 		JBrowse link
G ING3 inhibitor of growth family member 3 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 7:112,955,848...112,984,473
Ensembl chr 7:125,643,332...125,671,566 		JBrowse link
G KAT5 lysine acetyltransferase 5 involved_in IEA Ensembl GO_REF:0000107 NCBI chr11:61,071,118...61,078,667
Ensembl chr11:64,404,572...64,412,667 		JBrowse link
G KHDC3L KH domain containing 3 like, subcortical maternal complex member involved_in IEA Ensembl GO_REF:0000107 NCBI chr 6:71,089,817...71,190,700
Ensembl chr 6:74,478,303...74,479,826 		JBrowse link
G LOC100971447 E1A-binding protein p400 involved_in IEA Ensembl GO_REF:0000107 NCBI chr12:129,606,823...129,737,179
Ensembl chr12:134,045,829...134,163,185 		JBrowse link
G MBTD1 mbt domain containing 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr17:45,267,275...45,350,751
Ensembl chr17:50,137,395...50,215,078 		JBrowse link
G MEAF6 MYST/Esa1 associated factor 6 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 1:36,761,402...36,783,746
Ensembl chr 1:38,111,937...38,133,360 		JBrowse link
G MORF4L1 mortality factor 4 like 1 involved_in ISO (PMID:27153538) ComplexPortal PMID:27153538 NCBI chr15:57,844,220...57,869,139
Ensembl chr15:76,772,007...76,829,259 		JBrowse link
G MORF4L2 mortality factor 4 like 2 involved_in ISO (PMID:27153538) ComplexPortal PMID:27153538 NCBI chr  X:92,904,721...92,917,340 JBrowse link
G MRGBP MRG domain binding protein involved_in ISO (PMID:27153538) ComplexPortal PMID:27153538 NCBI chr20:59,183,842...59,187,982 JBrowse link
G MRNIP MRN complex interacting protein involved_in IEA Ensembl GO_REF:0000107 NCBI chr 5:174,989,967...175,020,550
Ensembl chr 5:182,299,016...182,340,632 		JBrowse link
G OOEP oocyte expressed protein involved_in ISO (PMID:29955025) UniProt PMID:29955025 NCBI chr 6:71,195,619...71,197,040
Ensembl chr 6:74,484,764...74,511,331 		JBrowse link
G PARP1 poly(ADP-ribose) polymerase 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 1:201,820,355...201,867,673
Ensembl chr 1:206,812,981...206,860,356 		JBrowse link
G PELI1 pellino E3 ubiquitin protein ligase 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr2A:64,160,362...64,213,200
Ensembl chr2A:65,284,480...65,336,339 		JBrowse link
G PIAS4 protein inhibitor of activated STAT 4 involved_in IEA Ensembl GO_REF:0000107 NCBI chr19:3,030,885...3,062,642
Ensembl chr19:3,982,555...4,015,167 		JBrowse link
G PRMT1 protein arginine methyltransferase 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr19:46,691,795...46,705,179
Ensembl chr19:55,610,938...55,623,135 		JBrowse link
G RAD51AP1 RAD51 associated protein 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr12:4,657,972...4,679,232
Ensembl chr12:4,578,621...4,599,879 		JBrowse link
G RNF126 ring finger protein 126 involved_in IEA Ensembl GO_REF:0000107 NCBI chr19:491,699...494,175
Ensembl chr19:614,236...618,659 		JBrowse link
G RNF8 ring finger protein 8 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 6:36,918,705...36,955,380
Ensembl chr 6:38,108,414...38,145,949 		JBrowse link
G RUVBL1 RuvB like AAA ATPase 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 3:125,120,524...125,200,859
Ensembl chr 3:132,486,229...132,528,918 		JBrowse link
G RUVBL2 RuvB like AAA ATPase 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chr19:45,995,394...46,017,835
Ensembl chr19:54,739,474...54,761,407 		JBrowse link
G SKP2 S-phase kinase associated protein 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 5:74,179,608...74,211,563
Ensembl chr 5:79,461,018...79,492,311 		JBrowse link
G TIMELESS timeless circadian regulator involved_in IEA Ensembl GO_REF:0000107 NCBI chr12:32,465,529...32,497,581
Ensembl chr12:32,718,649...32,750,728 		JBrowse link
G TRRAP transformation/transcription domain associated protein involved_in ISO (PMID:27153538) ComplexPortal PMID:27153538 NCBI chr 7:90,845,518...90,981,700
Ensembl chr 7:104,351,320...104,486,722 		JBrowse link
G VPS72 vacuolar protein sorting 72 homolog involved_in IEA Ensembl GO_REF:0000107 NCBI chr 1:126,525,642...126,539,432
Ensembl chr 1:130,174,051...130,187,785 		JBrowse link
G WAS WASP actin nucleation promoting factor involved_in IEA Ensembl GO_REF:0000107 NCBI chr  X:40,982,132...40,989,767
Ensembl chr  X:48,842,765...48,850,380 		JBrowse link
G WDR48 WD repeat domain 48 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 3:38,948,440...38,992,872
Ensembl chr 3:39,228,920...39,273,300 		JBrowse link
G WRAP53 WD repeat containing antisense to TP53 involved_in IEA Ensembl GO_REF:0000107 NCBI chr17:7,715,897...7,735,873
Ensembl chr17:7,707,221...7,723,394 		JBrowse link
G YEATS4 YEATS domain containing 4 involved_in IEA Ensembl GO_REF:0000107 NCBI chr12:66,881,733...66,912,966
Ensembl chr12:69,658,150...69,688,824 		JBrowse link
positive regulation of double-strand break repair via nonhomologous end joining term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G CYREN cell cycle regulator of NHEJ involved_in ISO (PMID:30017584) DisProt PMID:30017584 NCBI chr 7:127,130,587...127,148,824 JBrowse link
G FH fumarate hydratase involved_in ISO (PMID:26237645) UniProt PMID:26237645 NCBI chr 1:217,059,847...217,081,795
Ensembl chr 1:222,041,142...222,064,212 		JBrowse link
G KDM4D lysine demethylase 4D acts_upstream_of_or_within ISO (PMID:24550317) MGI PMID:24550317 NCBI chr11:89,987,537...90,013,421 JBrowse link
G KMT5B lysine methyltransferase 5B involved_in IEA Ensembl GO_REF:0000107 NCBI chr11:63,239,796...63,297,113
Ensembl chr11:66,549,230...66,581,475 		JBrowse link
G KMT5C lysine methyltransferase 5C involved_in IEA Ensembl GO_REF:0000107 NCBI chr19:52,381,963...52,390,507
Ensembl chr19:61,073,396...61,078,717 		JBrowse link
G LOC100986203 histone-lysine N-methyltransferase SETMAR involved_in IEA Ensembl GO_REF:0000107 NCBI chr 3:4,256,539...4,271,593
Ensembl chr 3:4,357,890...4,371,791 		JBrowse link
G MAD2L2 mitotic arrest deficient 2 like 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 1:10,436,532...10,454,023
Ensembl chr 1:11,654,963...11,661,526 		JBrowse link
G PARP3 poly(ADP-ribose) polymerase family member 3 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 3:51,883,695...51,890,266
Ensembl chr 3:53,112,494...53,119,053 		JBrowse link
G PNKP polynucleotide kinase 3'-phosphatase involved_in IEA Ensembl GO_REF:0000107 NCBI chr19:46,874,216...46,880,954
Ensembl chr19:55,790,048...55,796,762 		JBrowse link
G PRKDC protein kinase, DNA-activated, catalytic subunit involved_in IEA Ensembl GO_REF:0000107 NCBI chr 8:44,201,391...44,386,803
Ensembl chr 8:41,593,029...41,778,299 		JBrowse link
G RIF1 replication timing regulatory factor 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr2B:38,721,658...38,818,488
Ensembl chr2B:155,985,960...156,052,926 		JBrowse link
G SHLD1 shieldin complex subunit 1 involved_in IEA Ensembl
TreeGrafter		 GO_REF:0000107 GO_REF:0000118 NCBI chr20:5,753,262...5,858,728
Ensembl chr20:5,537,488...5,642,107 		JBrowse link
G SHLD2 shieldin complex subunit 2 involved_in ISO (PMID:29656893), (PMID:29789392) UniProt PMID:29656893 PMID:29789392 NCBI chr10:83,639,020...83,643,420 JBrowse link
G SHLD3 shieldin complex subunit 3 involved_in ISO (PMID:29656893) UniProt PMID:29656893 NCBI chr 5:48,376,338...48,382,052 JBrowse link
G SMCHD1 structural maintenance of chromosomes flexible hinge domain containing 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr18:11,479,742...11,627,035
Ensembl chr18:13,785,912...13,933,887 		JBrowse link
G TOP2B DNA topoisomerase II beta ISO RGD PMID:22019940 RGD:13432143 NCBI chr 3:25,499,239...25,566,029
Ensembl chr 3:25,828,879...25,896,912 		JBrowse link
G WRAP53 WD repeat containing antisense to TP53 involved_in IEA Ensembl GO_REF:0000107 NCBI chr17:7,715,897...7,735,873
Ensembl chr17:7,707,221...7,723,394 		JBrowse link
positive regulation of intrinsic apoptotic signaling pathway in response to DNA damage term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G FBH1 F-box DNA helicase 1 acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr10:5,931,389...5,978,844
Ensembl chr10:5,915,713...5,962,778 		JBrowse link
G MTCH2 mitochondrial carrier 2 acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr11:47,566,884...47,596,711
Ensembl chr11:48,115,774...48,146,312 		JBrowse link
G NACC2 NACC family member 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 9:107,079,113...107,168,332
Ensembl chr 9:136,066,229...136,105,176 		JBrowse link
G PIAS4 protein inhibitor of activated STAT 4 acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr19:3,030,885...3,062,642
Ensembl chr19:3,982,555...4,015,167 		JBrowse link
G PLSCR1 phospholipid scramblase 1 acts_upstream_of_or_within ISO (PMID:12509439) MGI PMID:12509439 NCBI chr 3:143,528,967...143,558,468
Ensembl chr 3:151,112,483...151,132,964 		JBrowse link
G RAD9A RAD9 checkpoint clamp component A acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr11:62,675,480...62,756,886
Ensembl chr11:66,061,208...66,068,214 		JBrowse link
G RPS3 ribosomal protein S3 involved_in ISO (PMID:22510408) UniProt PMID:22510408 NCBI chr11:70,460,702...70,466,909
Ensembl chr11:73,762,794...73,768,982 		JBrowse link
G SKIL SKI like proto-oncogene acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr 3:167,372,104...167,411,287
Ensembl chr 3:175,562,007...175,600,181 		JBrowse link
positive regulation of intrinsic apoptotic signaling pathway in response to DNA damage by p53 class mediator term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G KNL1 kinetochore scaffold 1 acts_upstream_of_or_within ISO (PMID:31197172) MGI PMID:31197172 NCBI chr15:19,539,264...19,609,593
Ensembl chr15:37,801,705...37,860,858 		JBrowse link
G RPL26 ribosomal protein L26 involved_in ISO (PMID:16213212) CAFA PMID:16213212 NCBI chr17:43,274,839...43,282,606
Ensembl chr17:48,009,198...48,015,977 		JBrowse link
G STEAP3 STEAP3 metalloreductase acts_upstream_of_or_within ISO (PMID:18617898) MGI PMID:18617898 NCBI chr2B:6,166,296...6,208,338
Ensembl chr2B:119,752,363...119,787,051 		JBrowse link
G TP73 tumor protein p73 acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr 1:2,323,399...2,405,295
Ensembl chr 1:3,476,064...3,529,206 		JBrowse link
positive regulation of mismatch repair term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G HDAC10 histone deacetylase 10 involved_in IEA Ensembl GO_REF:0000107 NCBI chr22:30,473,753...30,481,369
Ensembl chr22:49,473,369...49,479,216 		JBrowse link
G HMGB1 high mobility group box 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr13:11,737,942...11,894,923
Ensembl chr13:30,174,899...30,179,527 		JBrowse link
G PRKCG protein kinase C gamma involved_in IEA Ensembl GO_REF:0000107 NCBI chr19:50,823,372...50,849,003
Ensembl chr19:59,672,097...59,695,977 		JBrowse link
positive regulation of mitotic DNA damage checkpoint term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G MAP3K20 mitogen-activated protein kinase kinase kinase 20 involved_in IEA Ensembl GO_REF:0000107 NCBI chr2B:60,362,635...60,555,445
Ensembl chr2B:177,818,344...178,010,556 		JBrowse link
positive regulation of single strand break repair term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G WHR1 winged helix repair factor 1 involved_in ISO (PMID:38252411) UniProt PMID:38252411
positive regulation of telomere maintenance in response to DNA damage term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ACTL6A actin like 6A involved_in IEA Ensembl GO_REF:0000107 NCBI chr 3:176,595,149...176,620,556
Ensembl chr 3:184,765,523...184,790,983 		JBrowse link
G ACTR5 actin related protein 5 involved_in ISO (PMID:23979016) ComplexPortal PMID:23979016 NCBI chr20:35,073,297...35,097,955
Ensembl chr20:36,181,343...36,204,996 		JBrowse link
G ACTR8 actin related protein 8 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 3:53,802,916...53,820,244
Ensembl chr 3:55,027,468...55,041,182 		JBrowse link
G INO80 INO80 complex ATPase subunit involved_in IEA Ensembl GO_REF:0000107 NCBI chr15:19,920,980...20,058,117
Ensembl chr15:38,170,982...38,307,311 		JBrowse link
G INO80B INO80 complex subunit B involved_in ISO (PMID:23979016) ComplexPortal PMID:23979016 NCBI chr2A:74,521,624...74,524,578
Ensembl chr2A:76,027,621...76,030,549 		JBrowse link
G INO80C INO80 complex subunit C involved_in IEA Ensembl GO_REF:0000107 NCBI chr18:28,686,112...28,715,946
Ensembl chr18:32,260,924...32,304,152 		JBrowse link
G INO80D INO80 complex subunit D involved_in IEA Ensembl GO_REF:0000107 NCBI chr2B:93,233,672...93,325,871
Ensembl chr2B:211,373,993...211,433,124 		JBrowse link
G MCRS1 microspherule protein 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr12:39,183,112...39,192,925
Ensembl chr12:40,073,860...40,083,655 		JBrowse link
G NFRKB nuclear factor related to kappaB binding protein involved_in IEA Ensembl GO_REF:0000107 NCBI chr11:124,676,456...124,708,349
Ensembl chr11:128,572,240...128,601,779 		JBrowse link
G RUVBL1 RuvB like AAA ATPase 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 3:125,120,524...125,200,859
Ensembl chr 3:132,486,229...132,528,918 		JBrowse link
G RUVBL2 RuvB like AAA ATPase 2 involved_in ISO (PMID:23979016) ComplexPortal PMID:23979016 NCBI chr19:45,995,394...46,017,835
Ensembl chr19:54,739,474...54,761,407 		JBrowse link
G TFPT TCF3 fusion partner involved_in IEA Ensembl GO_REF:0000107 NCBI chr19:51,039,142...51,048,346
Ensembl chr19:59,879,141...59,891,335 		JBrowse link
G UCHL5 ubiquitin C-terminal hydrolase L5 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 1:168,471,501...168,519,366
Ensembl chr 1:172,764,606...172,811,880 		JBrowse link
G YY1 YY1 transcription factor involved_in ISO (PMID:23979016) ComplexPortal PMID:23979016 NCBI chr14:80,859,491...80,903,651 JBrowse link
postreplication repair term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G BARD1 BRCA1 associated RING domain 1 involved_in IEA InterPro
TreeGrafter		 GO_REF:0000002 GO_REF:0000118 NCBI chr2B:101,984,287...102,068,523
Ensembl chr2B:220,456,972...220,541,145 		JBrowse link
G BRCA1 BRCA1 DNA repair associated involved_in IEA Ensembl GO_REF:0000107 NCBI chr17:14,197,946...14,279,064
Ensembl chr17:14,428,526...14,506,815 		JBrowse link
G MSH2 mutS homolog 2 acts_upstream_of_or_within
involved_in		 IEA Ensembl GO_REF:0000107 NCBI chr2A:47,524,468...47,602,376
Ensembl chr2A:48,447,207...48,554,461 		JBrowse link
G POLH DNA polymerase eta involved_in
acts_upstream_of_or_within		 IEA UniProt
Ensembl		 GO_REF:0000107 GO_REF:0000117 NCBI chr 6:43,168,195...43,205,811
Ensembl chr 6:44,462,225...44,495,704 		JBrowse link
G RAD18 RAD18 E3 ubiquitin protein ligase involved_in IEA InterPro
TreeGrafter		 GO_REF:0000002 GO_REF:0000118 NCBI chr 3:8,832,910...8,918,067
Ensembl chr 3:9,076,500...9,161,585 		JBrowse link
G UBE2A ubiquitin conjugating enzyme E2 A involved_in IEA Ensembl GO_REF:0000107 NCBI chr  X:108,606,271...108,617,000
Ensembl chr  X:119,034,235...119,049,655 		JBrowse link
G UBE2B ubiquitin conjugating enzyme E2 B involved_in IEA Ensembl GO_REF:0000107 NCBI chr 5:129,775,011...129,794,853
Ensembl chr 5:135,925,217...135,944,609 		JBrowse link
G UBE2N ubiquitin conjugating enzyme E2 N acts_upstream_of ISO (PMID:17349954) HGNC-UCL PMID:17349954 NCBI chr12:90,951,446...90,984,075 JBrowse link
protection from non-homologous end joining at telomere term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ACD ACD shelterin complex subunit and telomerase recruitment factor involved_in IEA Ensembl GO_REF:0000107 NCBI chr16:48,001,408...48,004,620
Ensembl chr16:67,390,703...67,393,685 		JBrowse link
G DCLRE1B DNA cross-link repair 1B involved_in IEA Ensembl GO_REF:0000107 NCBI chr 1:88,643,664...88,651,962
Ensembl chr 1:123,692,915...123,701,403 		JBrowse link
G NBN nibrin involved_in IEA Ensembl GO_REF:0000107 NCBI chr 8:86,622,797...86,674,202
Ensembl chr 8:88,575,198...88,626,307 		JBrowse link
G TERF2 telomeric repeat binding factor 2 involved_in
acts_upstream_of_or_within		 IEA InterPro
Ensembl
TreeGrafter		 GO_REF:0000002 GO_REF:0000107 GO_REF:0000118 NCBI chr16:49,729,906...49,763,002
Ensembl chr16:69,116,539...69,148,423 		JBrowse link
G TERF2IP TERF2 interacting protein involved_in
NOT|involved_in		 IEA
ISO		 (PMID:20339076), (PMID:20622869) Ensembl
TreeGrafter
UniProt		 PMID:20339076 PMID:20622869 GO_REF:0000107 GO_REF:0000118 NCBI chr16:56,216,920...56,226,612
Ensembl chr16:75,565,184...75,573,882 		JBrowse link
protein-DNA covalent cross-linking repair term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G BRIP1 BRCA1 interacting DNA helicase 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr17:55,786,568...55,973,366
Ensembl chr17:60,901,073...61,083,462 		JBrowse link
G FAM111A FAM111 trypsin like peptidase A involved_in IEA Ensembl GO_REF:0000107 NCBI chr11:54,359,711...54,372,132
Ensembl chr11:57,818,413...57,823,046 		JBrowse link
G GCNA germ cell nuclear acidic peptidase involved_in IEA Ensembl GO_REF:0000107 NCBI chr  X:60,843,078...60,878,840
Ensembl chr  X:70,911,941...70,930,638 		JBrowse link
G HMCES 5-hydroxymethylcytosine binding, ES cell specific involved_in IEA Ensembl
InterPro		 GO_REF:0000002 GO_REF:0000107 NCBI chr 3:126,339,758...126,367,166
Ensembl chr 3:133,694,676...133,721,519 		JBrowse link
G LOC100995302 RAD54 like 2 involved_in IEA Ensembl
TreeGrafter		 GO_REF:0000107 GO_REF:0000118 NCBI chr 3:51,466,650...51,637,062
Ensembl chr 3:52,754,861...52,828,441
Ensembl chr 3:52,754,861...52,828,441 		JBrowse link
G SPRTN SprT-like N-terminal domain involved_in IEA Ensembl GO_REF:0000107 NCBI chr 1:206,889,897...206,906,047
Ensembl chr 1:211,914,082...211,931,093 		JBrowse link
G VCP valosin containing protein involved_in IEA Ensembl GO_REF:0000107 NCBI chr 9:34,907,147...34,923,227
Ensembl chr 9:35,712,937...35,729,588 		JBrowse link
G VCPIP1 valosin containing protein interacting protein 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 8:63,173,116...63,210,119
Ensembl chr 8:64,842,479...64,874,818 		JBrowse link
pyrimidine dimer repair term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G DDB2 damage specific DNA binding protein 2 acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr11:47,161,345...47,185,526
Ensembl chr11:47,714,723...47,738,761 		JBrowse link
G ERCC6 ERCC excision repair 6, chromatin remodeling factor acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr10:44,703,720...44,784,948 JBrowse link
G POLB DNA polymerase beta ISO RGD PMID:12388548 RGD:633643 NCBI chr 8:41,582,370...41,615,950
Ensembl chr 8:39,026,991...39,060,464 		JBrowse link
G POLH DNA polymerase eta acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr 6:43,168,195...43,205,811
Ensembl chr 6:44,462,225...44,495,704 		JBrowse link
pyrimidine dimer repair by nucleotide-excision repair term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ERCC1 ERCC excision repair 1, endonuclease non-catalytic subunit acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr19:42,356,039...42,427,754
Ensembl chr19:50,951,674...50,968,430 		JBrowse link
G HMGN1 high mobility group nucleosome binding domain 1 acts_upstream_of_or_within ISO (PMID:12660172) MGI PMID:12660172 NCBI chr21:25,695,582...25,702,689 JBrowse link
G SIRT1 sirtuin 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr10:64,368,878...64,401,684
Ensembl chr10:66,681,598...66,715,069 		JBrowse link
G XPC XPC complex subunit, DNA damage recognition and repair factor acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr 3:14,063,499...14,097,023
Ensembl chr 3:14,403,958...14,437,377 		JBrowse link
recombinational interstrand cross-link repair term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G MCM8 minichromosome maintenance 8 homologous recombination repair factor involved_in IEA Ensembl GO_REF:0000107 NCBI chr20:5,945,034...5,993,725
Ensembl chr20:5,729,174...5,775,133 		JBrowse link
G MCM9 minichromosome maintenance 9 homologous recombination repair factor involved_in IEA Ensembl GO_REF:0000107 NCBI chr 6:116,620,188...116,743,435
Ensembl chr 6:120,763,329...120,881,865 		JBrowse link
recombinational repair term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G FBH1 F-box DNA helicase 1 involved_in IEA TreeGrafter GO_REF:0000118 NCBI chr10:5,931,389...5,978,844
Ensembl chr10:5,915,713...5,962,778 		JBrowse link
G HROB homologous recombination factor with OB-fold involved_in IEA InterPro GO_REF:0000002 NCBI chr17:13,233,464...13,254,726
Ensembl chr17:13,395,473...13,409,505 		JBrowse link
G RHNO1 RAD9-HUS1-RAD1 interacting nuclear orphan 1 involved_in IEA Ensembl
TreeGrafter		 GO_REF:0000107 GO_REF:0000118 NCBI chr12:2,999,089...3,011,911
Ensembl chr12:2,930,957...2,943,419 		JBrowse link
G ZGRF1 zinc finger GRF-type containing 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 4:105,026,069...105,128,226
Ensembl chr 4:115,590,311...115,686,089 		JBrowse link
regulation of base-excision repair term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G PARP1 poly(ADP-ribose) polymerase 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 1:201,820,355...201,867,673
Ensembl chr 1:206,812,981...206,860,356 		JBrowse link
G XRCC1 X-ray repair cross complementing 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr19:40,485,052...40,522,188
Ensembl chr19:49,094,014...49,125,520 		JBrowse link
regulation of DNA damage checkpoint term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G CRY1 cryptochrome circadian regulator 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr12:104,558,874...104,658,833
Ensembl chr12:107,954,262...108,052,484 		JBrowse link
G CUL4A cullin 4A acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr13:94,350,484...94,409,183
Ensembl chr13:113,428,271...113,472,701 		JBrowse link
G ETAA1 ETAA1 activator of ATR kinase involved_in IEA Ensembl
TreeGrafter		 GO_REF:0000107 GO_REF:0000118 NCBI chr2A:67,455,668...67,470,509
Ensembl chr2A:68,578,554...68,591,534 		JBrowse link
G FBXO4 F-box protein 4 acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr 5:68,336,673...68,474,481
Ensembl chr 5:73,500,850...73,517,051 		JBrowse link
G FEM1B fem-1 homolog B involved_in IEA Ensembl GO_REF:0000107 NCBI chr15:47,236,920...47,254,878
Ensembl chr15:66,005,614...66,024,007 		JBrowse link
G NEK1 NIMA related kinase 1 involved_in ISO (PMID:18843199) CACAO PMID:18843199 NCBI chr 4:161,618,181...161,830,332
Ensembl chr 4:173,690,074...173,902,100 		JBrowse link
G RFWD3 ring finger and WD repeat domain 3 involved_in IEA Ensembl GO_REF:0000107 NCBI chr16:55,187,178...55,233,265
Ensembl chr16:74,541,450...74,586,951 		JBrowse link
G RNASEH2B ribonuclease H2 subunit B acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr13:32,047,830...32,108,573
Ensembl chr13:50,795,701...50,852,909 		JBrowse link
G RPA2 replication protein A2 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 1:27,151,784...27,175,110
Ensembl chr 1:28,191,731...28,214,666 		JBrowse link
G WDR76 WD repeat domain 76 involved_in IEA TreeGrafter GO_REF:0000118 NCBI chr15:22,786,956...22,828,496
Ensembl chr15:40,877,721...40,918,519 		JBrowse link
regulation of DNA damage response, signal transduction by p53 class mediator term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G COPS3 COP9 signalosome subunit 3 involved_in IEA Ensembl GO_REF:0000107 NCBI chr17:34,013,180...34,047,546
Ensembl chr17:38,944,618...38,978,235 		JBrowse link
G KMT5A lysine methyltransferase 5A involved_in IEA TreeGrafter GO_REF:0000118 NCBI chr12:120,982,059...121,007,360 JBrowse link
G LOC100978154 N-lysine methyltransferase KMT5A involved_in IEA TreeGrafter GO_REF:0000118 NCBI chr 1:85,914,541...85,916,387 JBrowse link
G NPM1 nucleophosmin 1 acts_upstream_of_or_within ISO (PMID:16199867) MGI PMID:16199867 NCBI chr 5:166,735,904...166,756,321
Ensembl chr 5:173,490,197...173,510,656 		JBrowse link
G SMYD2 SET and MYND domain containing 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 1:189,849,167...189,905,193
Ensembl chr 1:194,729,116...194,761,045 		JBrowse link
G SOX4 SRY-box transcription factor 4 involved_in ISO (PMID:19234109) GO_Central PMID:19234109 NCBI chr 6:21,422,846...21,427,779 JBrowse link
G TP53 tumor protein p53 acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr17:7,699,449...7,717,812
Ensembl chr17:7,684,922...7,706,120 		JBrowse link
G ZMPSTE24 zinc metallopeptidase STE24 acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr 1:39,545,264...39,589,721
Ensembl chr 1:40,869,076...40,912,747 		JBrowse link
regulation of DNA double-strand break processing term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G HELB DNA helicase B involved_in IEA Ensembl GO_REF:0000107 NCBI chr12:22,571,448...22,607,417
Ensembl chr12:23,078,732...23,114,134 		JBrowse link
regulation of DNA repair term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ACTL6A actin like 6A involved_in IEA Ensembl GO_REF:0000107 NCBI chr 3:176,595,149...176,620,556
Ensembl chr 3:184,765,523...184,790,983 		JBrowse link
G ACTR5 actin related protein 5 involved_in ISO (PMID:23979016) ComplexPortal PMID:23979016 NCBI chr20:35,073,297...35,097,955
Ensembl chr20:36,181,343...36,204,996 		JBrowse link
G ACTR8 actin related protein 8 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 3:53,802,916...53,820,244
Ensembl chr 3:55,027,468...55,041,182 		JBrowse link
G C9H11orf54 chromosome 9 C11orf54 homolog involved_in IEA Ensembl GO_REF:0000107 NCBI chr11:88,763,232...88,785,075
Ensembl chr11:92,250,482...92,272,026 		JBrowse link
G CDK9 cyclin dependent kinase 9 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 9:98,905,468...98,909,923
Ensembl chr 9:127,580,862...127,584,935 		JBrowse link
G IER3 immediate early response 3 acts_upstream_of_or_within ISO (PMID:20467439) MGI PMID:20467439 NCBI chr 6:30,488,162...30,489,784 JBrowse link
G INO80 INO80 complex ATPase subunit involved_in IEA Ensembl GO_REF:0000107 NCBI chr15:19,920,980...20,058,117
Ensembl chr15:38,170,982...38,307,311 		JBrowse link
G INO80B INO80 complex subunit B involved_in ISO (PMID:23979016) ComplexPortal PMID:23979016 NCBI chr2A:74,521,624...74,524,578
Ensembl chr2A:76,027,621...76,030,549 		JBrowse link
G INO80C INO80 complex subunit C involved_in IEA Ensembl GO_REF:0000107 NCBI chr18:28,686,112...28,715,946
Ensembl chr18:32,260,924...32,304,152 		JBrowse link
G INO80D INO80 complex subunit D involved_in IEA Ensembl GO_REF:0000107 NCBI chr2B:93,233,672...93,325,871
Ensembl chr2B:211,373,993...211,433,124 		JBrowse link
G MCRS1 microspherule protein 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr12:39,183,112...39,192,925
Ensembl chr12:40,073,860...40,083,655 		JBrowse link
G NFRKB nuclear factor related to kappaB binding protein involved_in IEA Ensembl GO_REF:0000107 NCBI chr11:124,676,456...124,708,349
Ensembl chr11:128,572,240...128,601,779 		JBrowse link
G RIOX1 ribosomal oxygenase 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr14:54,078,798...54,110,366
Ensembl chr14:72,937,119...72,939,242 		JBrowse link
G RUVBL1 RuvB like AAA ATPase 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 3:125,120,524...125,200,859
Ensembl chr 3:132,486,229...132,528,918 		JBrowse link
G RUVBL2 RuvB like AAA ATPase 2 involved_in ISO (PMID:23979016) ComplexPortal PMID:23979016 NCBI chr19:45,995,394...46,017,835
Ensembl chr19:54,739,474...54,761,407 		JBrowse link
G SETD7 SET domain containing 7, histone lysine methyltransferase involved_in IEA Ensembl GO_REF:0000107 NCBI chr 4:131,869,999...131,921,342
Ensembl chr 4:143,167,190...143,227,732 		JBrowse link
G SGF29 SAGA complex associated factor 29 involved_in ISO (PMID:35210392) UniProt PMID:35210392 Ensembl chr16:29,030,587...29,068,795 JBrowse link
G SIRT7 sirtuin 7 involved_in IEA Ensembl GO_REF:0000107 NCBI chr17:76,317,560...76,323,761
Ensembl chr17:82,020,077...82,026,289 		JBrowse link
G SUV39H1 SUV39H1 histone lysine methyltransferase acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr  X:40,993,911...41,007,362
Ensembl chr  X:48,855,494...48,868,131 		JBrowse link
G TFPT TCF3 fusion partner involved_in IEA Ensembl GO_REF:0000107 NCBI chr19:51,039,142...51,048,346
Ensembl chr19:59,879,141...59,891,335 		JBrowse link
G UCHL5 ubiquitin C-terminal hydrolase L5 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 1:168,471,501...168,519,366
Ensembl chr 1:172,764,606...172,811,880 		JBrowse link
G USP1 ubiquitin specific peptidase 1 involved_in IEA Ensembl
InterPro		 GO_REF:0000002 GO_REF:0000107 NCBI chr 1:61,694,775...61,710,216
Ensembl chr 1:63,510,196...63,525,446 		JBrowse link
G YY1 YY1 transcription factor involved_in ISO (PMID:23979016) ComplexPortal PMID:23979016 NCBI chr14:80,859,491...80,903,651 JBrowse link
regulation of double-strand break repair term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G DEK DEK proto-oncogene involved_in
acts_upstream_of_or_within		 IEA TreeGrafter
Ensembl		 GO_REF:0000107 GO_REF:0000118 NCBI chr 6:18,071,928...18,112,245
Ensembl chr 6:18,427,844...18,465,606 		JBrowse link
G PML PML nuclear body scaffold involved_in IEA Ensembl GO_REF:0000107 NCBI chr15:52,903,874...52,955,151
Ensembl chr15:71,658,884...71,710,883 		JBrowse link
G PPP4C protein phosphatase 4 catalytic subunit involved_in IEA Ensembl GO_REF:0000107 Ensembl chr16:30,450,467...30,464,446 JBrowse link
G PPP4R2 protein phosphatase 4 regulatory subunit 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 3:72,939,529...73,012,073
Ensembl chr 3:74,835,788...74,935,446 		JBrowse link
G PPP4R3B protein phosphatase 4 regulatory subunit 3B involved_in IEA Ensembl GO_REF:0000107 NCBI chr2A:55,699,379...55,775,193
Ensembl chr2A:56,842,926...56,914,393 		JBrowse link
regulation of double-strand break repair via homologous recombination term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G CHEK1 checkpoint kinase 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr11:120,446,352...120,478,207
Ensembl chr11:124,359,218...124,390,981 		JBrowse link
G FIGNL1 fidgetin like 1 involved_in ISO (PMID:23754376) UniProt PMID:23754376 NCBI chr 7:51,080,052...51,093,694 JBrowse link
G KDM1A lysine demethylase 1A acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr 1:22,205,624...22,269,571
Ensembl chr 1:23,153,066...23,217,692 		JBrowse link
G PPP4C protein phosphatase 4 catalytic subunit involved_in IEA Ensembl GO_REF:0000107 Ensembl chr16:30,450,467...30,464,446 JBrowse link
G PPP4R2 protein phosphatase 4 regulatory subunit 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 3:72,939,529...73,012,073
Ensembl chr 3:74,835,788...74,935,446 		JBrowse link
G RAD51 RAD51 recombinase involved_in IEA Ensembl GO_REF:0000107 NCBI chr15:19,638,310...19,672,474
Ensembl chr15:37,891,056...37,925,207 		JBrowse link
G RAD51AP1 RAD51 associated protein 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr12:4,657,972...4,679,232
Ensembl chr12:4,578,621...4,599,879 		JBrowse link
G RPA2 replication protein A2 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 1:27,151,784...27,175,110
Ensembl chr 1:28,191,731...28,214,666 		JBrowse link
G RTEL1 regulator of telomere elongation helicase 1 involved_in IEA UniProt
TreeGrafter
Ensembl		 GO_REF:0000104 GO_REF:0000107 GO_REF:0000118 Ensembl chr20:61,581,331...61,618,718 JBrowse link
G SETD2 SET domain containing 2, histone lysine methyltransferase involved_in IEA Ensembl GO_REF:0000107 NCBI chr 3:46,916,615...47,064,046
Ensembl chr 3:48,018,517...48,163,999 		JBrowse link
G SIRT6 sirtuin 6 involved_in IEA Ensembl GO_REF:0000107 NCBI chr19:3,196,092...3,204,602
Ensembl chr19:4,146,057...4,154,126 		JBrowse link
G SPIDR scaffold protein involved in DNA repair involved_in IEA Ensembl GO_REF:0000107 NCBI chr 8:43,691,454...44,166,259
Ensembl chr 8:41,083,964...41,558,170 		JBrowse link
G TERF2IP TERF2 interacting protein involved_in IEA Ensembl GO_REF:0000107 NCBI chr16:56,216,920...56,226,612
Ensembl chr16:75,565,184...75,573,882 		JBrowse link
G TEX15 testis expressed 15, meiosis and synapsis associated involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:18283110) InterPro
TreeGrafter
MGI		 PMID:18283110 GO_REF:0000002 GO_REF:0000118 NCBI chr 8:30,145,628...30,232,903
Ensembl chr 8:27,334,129...27,420,049 		JBrowse link
G USP51 ubiquitin specific peptidase 51 involved_in ISO (PMID:27083998) UniProt PMID:27083998 NCBI chr  X:47,747,547...47,753,119 JBrowse link
G ZNF365 zinc finger protein 365 involved_in IEA Ensembl
TreeGrafter		 GO_REF:0000107 GO_REF:0000118 NCBI chr10:58,894,939...58,923,176
Ensembl chr10:61,223,925...61,329,657 		JBrowse link
regulation of double-strand break repair via nonhomologous end joining term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ACTR2 actin related protein 2 NOT|involved_in ISO (PMID:29925947) UniProt PMID:29925947 NCBI chr2A:65,289,675...65,333,219
Ensembl chr2A:66,413,011...66,456,857 		JBrowse link
G DEK DEK proto-oncogene acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr 6:18,071,928...18,112,245
Ensembl chr 6:18,427,844...18,465,606 		JBrowse link
G MRNIP MRN complex interacting protein involved_in IEA Ensembl GO_REF:0000107 NCBI chr 5:174,989,967...175,020,550
Ensembl chr 5:182,299,016...182,340,632 		JBrowse link
G NSD2 nuclear receptor binding SET domain protein 2 acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr 4:2,009,276...2,119,182
Ensembl chr 4:1,945,307...2,027,425 		JBrowse link
G POT1 protection of telomeres 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 7:116,807,913...116,926,998
Ensembl chr 7:129,487,571...129,605,558 		JBrowse link
G SHLD1 shieldin complex subunit 1 involved_in IEA InterPro GO_REF:0000002 NCBI chr20:5,753,262...5,858,728
Ensembl chr20:5,537,488...5,642,107 		JBrowse link
G USP51 ubiquitin specific peptidase 51 involved_in ISO (PMID:27083998) UniProt PMID:27083998 NCBI chr  X:47,747,547...47,753,119 JBrowse link
regulation of intrinsic apoptotic signaling pathway in response to DNA damage by p53 class mediator term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G HNRNPK heterogeneous nuclear ribonucleoprotein K acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr 9:40,898,593...40,911,159
Ensembl chr 9:83,324,238...83,336,756 		JBrowse link
regulation of mismatch repair term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G AXIN2 axin 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chr17:59,476,336...59,509,358
Ensembl chr17:64,688,416...64,720,086 		JBrowse link
regulation of nucleotide-excision repair term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G CUL4A cullin 4A acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr13:94,350,484...94,409,183
Ensembl chr13:113,428,271...113,472,701 		JBrowse link
G HMGB1 high mobility group box 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr13:11,737,942...11,894,923
Ensembl chr13:30,174,899...30,179,527 		JBrowse link
G KAT7 lysine acetyltransferase 7 involved_in IEA Ensembl GO_REF:0000107 NCBI chr17:43,875,921...43,916,352
Ensembl chr17:48,605,488...48,645,784 		JBrowse link
G RAD52 RAD52 homolog, DNA repair protein acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr12:986,372...1,066,708
Ensembl chr12:946,825...985,668 		JBrowse link
regulation of single strand break repair term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G PARP1 poly(ADP-ribose) polymerase 1 acts_upstream_of_or_within ISO (PMID:25378300) MGI PMID:25378300 NCBI chr 1:201,820,355...201,867,673
Ensembl chr 1:206,812,981...206,860,356 		JBrowse link
regulation of transcription-coupled nucleotide-excision repair term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ERCC8 ERCC excision repair 8, CSA ubiquitin ligase complex subunit involved_in IEA Ensembl GO_REF:0000107 NCBI chr 5:53,053,712...53,131,563
Ensembl chr 5:54,693,987...54,765,496 		JBrowse link
replication-born double-strand break repair via sister chromatid exchange term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G BLM BLM RecQ like helicase acts_upstream_of_or_within ISO (PMID:25597246) MGI PMID:25597246 NCBI chr15:69,407,248...69,508,070
Ensembl chr15:88,607,157...88,707,864 		JBrowse link
G FANCB FA complementation group B acts_upstream_of_or_within
involved_in		 ISO
IEA		 (PMID:25520194) MGI
TreeGrafter		 PMID:25520194 GO_REF:0000118 NCBI chr  X:7,470,574...7,500,958
Ensembl chr  X:14,752,934...14,781,817 		JBrowse link
G NIPBL NIPBL cohesin loading factor involved_in IEA TreeGrafter GO_REF:0000118 NCBI chr 5:73,306,527...73,491,367
Ensembl chr 5:78,585,649...78,698,184 		JBrowse link
G RAD21 RAD21 cohesin complex component involved_in IEA TreeGrafter GO_REF:0000118 NCBI chr 8:113,520,456...113,549,339
Ensembl chr 8:116,063,503...116,092,421 		JBrowse link
G RAD21L1 RAD21 cohesin complex component like 1 involved_in IEA TreeGrafter GO_REF:0000118 NCBI chr20:1,385,935...1,413,301
Ensembl chr20:1,153,384...1,231,383 		JBrowse link
G RAD51 RAD51 recombinase acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr15:19,638,310...19,672,474
Ensembl chr15:37,891,056...37,925,207 		JBrowse link
G RECQL5 RecQ like helicase 5 acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr17:69,577,778...69,618,068
Ensembl chr17:75,128,325...75,168,254 		JBrowse link
signal transduction in response to DNA damage term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ABL1 ABL proto-oncogene 1, non-receptor tyrosine kinase involved_in IEA Ensembl GO_REF:0000107 NCBI chr 9:101,834,189...102,005,811
Ensembl chr 9:130,484,333...130,652,941 		JBrowse link
G ATAD5 ATPase family AAA domain containing 5 acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr17:25,944,259...26,009,317
Ensembl chr17:25,436,195...25,496,242 		JBrowse link
G ATM ATM serine/threonine kinase involved_in IEA Ensembl GO_REF:0000107 NCBI chr11:103,109,979...103,256,405
Ensembl chr11:106,584,228...106,727,041 		JBrowse link
G CASP9 caspase 9 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 1:14,630,659...14,662,865
Ensembl chr 1:15,624,666...15,656,266 		JBrowse link
G CHEK1 checkpoint kinase 1 involved_in ISO
IEA		 RGD
Ensembl		 PMID:11278490 GO_REF:0000107 RGD:2316109 NCBI chr11:120,446,352...120,478,207
Ensembl chr11:124,359,218...124,390,981 		JBrowse link
G CHEK2 checkpoint kinase 2 acts_upstream_of_or_within
involved_in		 ISO (PMID:14744935)
(PMID:11298456)		 MGI
UniProt		 PMID:11298456 PMID:14744935 NCBI chr22:9,757,038...9,811,171 JBrowse link
G CRY1 cryptochrome circadian regulator 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr12:104,558,874...104,658,833
Ensembl chr12:107,954,262...108,052,484 		JBrowse link
G GADD45A growth arrest and DNA damage inducible alpha involved_in IEA Ensembl GO_REF:0000107 NCBI chr 1:66,925,063...66,928,222
Ensembl chr 1:68,880,912...68,884,188 		JBrowse link
G GRB2 growth factor receptor bound protein 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chr17:69,265,307...69,352,835
Ensembl chr17:74,817,471...74,903,796 		JBrowse link
G MAPK14 mitogen-activated protein kinase 14 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 6:35,586,847...35,683,041
Ensembl chr 6:36,788,233...36,871,114 		JBrowse link
G MAPK3 mitogen-activated protein kinase 3 involved_in IEA Ensembl GO_REF:0000107 Ensembl chr16:30,489,362...30,498,017 JBrowse link
G RNF8 ring finger protein 8 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 6:36,918,705...36,955,380
Ensembl chr 6:38,108,414...38,145,949 		JBrowse link
G WNT1 Wnt family member 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr12:39,767,839...39,772,460
Ensembl chr12:40,648,413...40,652,583 		JBrowse link
single strand break repair term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G APLF aprataxin and PNKP like factor involved_in IEA Ensembl GO_REF:0000107 NCBI chr2A:68,509,314...68,629,192
Ensembl chr2A:69,632,459...69,744,611 		JBrowse link
G APTX aprataxin involved_in IEA Ensembl
TreeGrafter		 GO_REF:0000107 GO_REF:0000118 NCBI chr 9:32,747,409...32,819,270
Ensembl chr 9:33,556,419...33,585,060 		JBrowse link
G ERCC6 ERCC excision repair 6, chromatin remodeling factor involved_in IEA Ensembl GO_REF:0000107 NCBI chr10:44,703,720...44,784,948 JBrowse link
G ERCC8 ERCC excision repair 8, CSA ubiquitin ligase complex subunit involved_in IEA Ensembl GO_REF:0000107 NCBI chr 5:53,053,712...53,131,563
Ensembl chr 5:54,693,987...54,765,496 		JBrowse link
G LIG4 DNA ligase 4 involved_in IEA Ensembl GO_REF:0000107 NCBI chr13:89,336,434...89,347,418
Ensembl chr13:108,475,820...108,478,555 		JBrowse link
G NEIL3 nei like DNA glycosylase 3 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 4:169,503,942...169,556,654
Ensembl chr 4:181,738,803...181,795,082 		JBrowse link
G SIRT1 sirtuin 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr10:64,368,878...64,401,684
Ensembl chr10:66,681,598...66,715,069 		JBrowse link
G TDP1 tyrosyl-DNA phosphodiesterase 1 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:17914460), (PMID:17948061) Ensembl
MGI		 PMID:17914460 PMID:17948061 GO_REF:0000107 NCBI chr14:70,574,066...70,662,562
Ensembl chr14:89,926,462...90,014,802 		JBrowse link
G TNP1 transition protein 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr2B:104,122,748...104,123,349
Ensembl chr2B:222,723,606...222,724,212 		JBrowse link
G XRCC1 X-ray repair cross complementing 1 involved_in IEA InterPro
Ensembl		 GO_REF:0000002 GO_REF:0000107 NCBI chr19:40,485,052...40,522,188
Ensembl chr19:49,094,014...49,125,520 		JBrowse link
telomere maintenance in response to DNA damage term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G CDK2 cyclin dependent kinase 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chr12:32,940,225...32,946,236
Ensembl chr12:33,189,934...33,195,945 		JBrowse link
G NBN nibrin involved_in IEA Ensembl GO_REF:0000107 NCBI chr 8:86,622,797...86,674,202
Ensembl chr 8:88,575,198...88,626,307 		JBrowse link
G PPP1CA protein phosphatase 1 catalytic subunit alpha involved_in IEA Ensembl GO_REF:0000107 NCBI chr11:62,756,659...62,760,369
Ensembl chr11:66,068,007...66,071,611 		JBrowse link
G RIF1 replication timing regulatory factor 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr2B:38,721,658...38,818,488
Ensembl chr2B:155,985,960...156,052,926 		JBrowse link
G RTEL1 regulator of telomere elongation helicase 1 involved_in ISO (PMID:22579284) BHF-UCL PMID:22579284 Ensembl chr20:61,581,331...61,618,718 JBrowse link
telomere maintenance via base-excision repair term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G APEX1 apurinic/apyrimidinic endodeoxyribonuclease 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr14:1,329,745...1,332,315
Ensembl chr14:19,381,911...19,384,542 		JBrowse link
transcription-coupled nucleotide-excision repair term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ELOF1 elongation factor 1 involved_in ISO (PMID:34108662), (PMID:34108663), (PMID:38316879) UniProt PMID:34108662 PMID:34108663 PMID:38316879 NCBI chr19:11,099,049...11,105,333 JBrowse link
G ERCC2 ERCC excision repair 2, TFIIH core complex helicase subunit involved_in IEA Ensembl GO_REF:0000107 NCBI chr19:42,298,927...42,319,816
Ensembl chr19:50,897,004...50,915,819 		JBrowse link
G ERCC3 ERCC excision repair 3, TFIIH core complex helicase subunit involved_in IEA Ensembl GO_REF:0000107 NCBI chr2B:32,983,492...33,020,492
Ensembl chr2B:127,922,483...127,959,372 		JBrowse link
G ERCC5 ERCC excision repair 5, endonuclease involved_in ISO (PMID:16246722) UniProt PMID:16246722 NCBI chr13:84,005,950...84,036,710
Ensembl chr13:103,096,344...103,174,182 		JBrowse link
G ERCC6 ERCC excision repair 6, chromatin remodeling factor involved_in
acts_upstream_of_or_within		 ISO
IEA		 RGD
Ensembl
TreeGrafter		 PMID:31644904 GO_REF:0000107 GO_REF:0000118 RGD:126925983 NCBI chr10:44,703,720...44,784,948 JBrowse link
G ERCC8 ERCC excision repair 8, CSA ubiquitin ligase complex subunit involved_in
acts_upstream_of_or_within		 IEA InterPro
Ensembl
TreeGrafter		 GO_REF:0000002 GO_REF:0000107 GO_REF:0000118 NCBI chr 5:53,053,712...53,131,563
Ensembl chr 5:54,693,987...54,765,496 		JBrowse link
G HMGN1 high mobility group nucleosome binding domain 1 acts_upstream_of_or_within ISO (PMID:12660172) MGI PMID:12660172 NCBI chr21:25,695,582...25,702,689 JBrowse link
G POLR2I RNA polymerase II subunit I involved_in IEA TreeGrafter GO_REF:0000118 NCBI chr19:33,032,989...33,034,628
Ensembl chr19:41,780,125...41,781,764 		JBrowse link
G RBX1 ring-box 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr22:21,845,351...21,866,627
Ensembl chr22:39,941,405...39,962,175 		JBrowse link
G USP7 ubiquitin specific peptidase 7 involved_in IEA Ensembl GO_REF:0000107 NCBI chr16:7,825,332...7,895,095
Ensembl chr16:9,065,858...9,106,146 		JBrowse link
G UVSSA UV stimulated scaffold protein A involved_in IEA Ensembl
TreeGrafter		 GO_REF:0000107 GO_REF:0000118 NCBI chr 4:1,492,716...1,532,114
Ensembl chr 4:1,373,562...1,413,982 		JBrowse link
G XAB2 XPA binding protein 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chr19:6,909,281...6,919,332
Ensembl chr19:7,764,264...7,774,305 		JBrowse link
translesion synthesis term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G DTL denticleless E3 ubiquitin protein ligase homolog involved_in IEA Ensembl GO_REF:0000107 NCBI chr 1:187,603,600...187,672,006
Ensembl chr 1:192,466,408...192,535,071 		JBrowse link
G FAAP20 FA core complex associated protein 20 involved_in ISO (PMID:22266823) UniProt PMID:22266823 NCBI chr 1:900,616...922,845 JBrowse link
G PARP10 poly(ADP-ribose) polymerase family member 10 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 8:140,743,061...140,744,014
Ensembl chr 8:143,735,819...143,744,138 		JBrowse link
G PCLAF PCNA clamp associated factor involved_in IEA Ensembl
TreeGrafter		 GO_REF:0000107 GO_REF:0000118 NCBI chr15:43,311,115...43,331,979
Ensembl chr15:61,602,830...61,617,303 		JBrowse link
G PCNA proliferating cell nuclear antigen involved_in IEA Ensembl
TreeGrafter		 GO_REF:0000107 GO_REF:0000118 NCBI chr20:5,134,930...5,146,603
Ensembl chr20:4,927,731...4,939,440 		JBrowse link
G POLI DNA polymerase iota acts_upstream_of_or_within
involved_in		 ISO
IEA		 (PMID:17114294) MGI
TreeGrafter		 PMID:17114294 GO_REF:0000118 NCBI chr18:47,653,545...47,706,614
Ensembl chr18:50,990,959...51,019,666 		JBrowse link
G POLN DNA polymerase nu involved_in IEA Ensembl GO_REF:0000107 NCBI chr 4:2,214,154...2,385,094
Ensembl chr 4:2,122,309...2,292,431 		JBrowse link
G PRIMPOL primase and DNA directed polymerase involved_in IEA TreeGrafter GO_REF:0000118 NCBI chr 4:176,815,122...176,860,682 JBrowse link
G REV3L REV3 like, DNA directed polymerase zeta catalytic subunit involved_in IEA InterPro GO_REF:0000002 NCBI chr 6:109,104,341...109,291,268
Ensembl chr 6:113,181,759...113,367,625 		JBrowse link
G SPRTN SprT-like N-terminal domain involved_in IEA Ensembl GO_REF:0000107 NCBI chr 1:206,889,897...206,906,047
Ensembl chr 1:211,914,082...211,931,093 		JBrowse link
G VCP valosin containing protein involved_in IEA Ensembl GO_REF:0000107 NCBI chr 9:34,907,147...34,923,227
Ensembl chr 9:35,712,937...35,729,588 		JBrowse link
G ZBTB1 zinc finger and BTB domain containing 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr14:45,085,146...45,114,965
Ensembl chr14:63,354,458...63,359,403 		JBrowse link
UV-damage excision repair term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ACTR5 actin related protein 5 involved_in IEA Ensembl GO_REF:0000107 NCBI chr20:35,073,297...35,097,955
Ensembl chr20:36,181,343...36,204,996 		JBrowse link
G CUL4B cullin 4B involved_in IEA Ensembl GO_REF:0000107 NCBI chr  X:109,798,279...109,870,469
Ensembl chr  X:119,985,116...120,034,702 		JBrowse link
G DDB1 damage specific DNA binding protein 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr11:56,599,422...56,633,140
Ensembl chr11:59,964,235...59,997,805 		JBrowse link
G DDB2 damage specific DNA binding protein 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chr11:47,161,345...47,185,526
Ensembl chr11:47,714,723...47,738,761 		JBrowse link
G ERCC1 ERCC excision repair 1, endonuclease non-catalytic subunit involved_in IEA TreeGrafter GO_REF:0000118 NCBI chr19:42,356,039...42,427,754
Ensembl chr19:50,951,674...50,968,430 		JBrowse link
G INO80 INO80 complex ATPase subunit involved_in IEA Ensembl GO_REF:0000107 NCBI chr15:19,920,980...20,058,117
Ensembl chr15:38,170,982...38,307,311 		JBrowse link
G LOC100975117 histone H2A type 3 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 1:203,858,974...203,860,255
Ensembl chr 1:209,070,117...209,070,509 		JBrowse link
G MC1R melanocortin 1 receptor involved_in ISO (PMID:18292087) BHF-UCL PMID:18292087 NCBI chr16:70,676,447...70,697,636 JBrowse link
G SIRT1 sirtuin 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr10:64,368,878...64,401,684
Ensembl chr10:66,681,598...66,715,069 		JBrowse link
G XPA XPA, DNA damage recognition and repair factor involved_in IEA TreeGrafter GO_REF:0000118 NCBI chr 9:68,726,723...68,788,049
Ensembl chr 9:96,886,795...96,909,254 		JBrowse link
G XPC XPC complex subunit, DNA damage recognition and repair factor involved_in IEA Ensembl GO_REF:0000107 NCBI chr 3:14,063,499...14,097,023
Ensembl chr 3:14,403,958...14,437,377 		JBrowse link
Term paths to the root
Path 1
Term Annotations click to browse term
  biological_process 19315
    response to stimulus 8607
      response to stress 3986
        cellular response to stress 1922
          DNA damage response 820
            DNA repair + 511
            DNA repair-dependent chromatin remodeling 23
            SOS response 0
            broken chromosome clustering 2
            intrinsic apoptotic signaling pathway in response to DNA damage + 112
            signal transduction in response to DNA damage + 183
            telomere maintenance in response to DNA damage + 28
paths to the root