ONTOLOGY REPORT - ANNOTATIONS
Term: smooth muscle contraction
Accession: GO:0006939
browse the term
Definition: A process in which force is generated within smooth muscle tissue, resulting in a change in muscle geometry. Force generation involves a chemo-mechanical energy conversion step that is carried out by the actin/myosin complex activity, which generates force through ATP hydrolysis. Smooth muscle differs from striated muscle in the much higher actin/myosin ratio, the absence of conspicuous sarcomeres and the ability to contract to a much smaller fraction of its resting length.
Synonyms: exact_synonym: visceral muscle contraction
G
Ada
adenosine deaminase
involved_in acts_upstream_of
IEA ISO
GO_REF:0000107 MGI:1857117|MGI:2683027 (PMID:18340377)
Ensembl RGD
PMID:18340377
GO_REF:0000107
NCBI chr 3:172,818,174...172,842,283
Ensembl chr 3:152,398,747...152,447,088
G
Adrb2
adrenoceptor beta 2
involved_in acts_upstream_of
IEA ISO
GO_REF:0000107 MGI:88398|MGI:98496 (PMID:12925702)
Ensembl RGD
PMID:12925702
GO_REF:0000107
NCBI chr18:57,912,760...57,914,802
Ensembl chr18:55,502,903...55,644,512
G
Apbb1
amyloid beta precursor protein binding family B member 1
involved_in
ISS ISO
GO_REF:0000024 (PMID:25757569)
UniProt RGD
PMID:25757569
GO_REF:0000024
NCBI chr 1:169,308,719...169,332,372
Ensembl chr 1:159,896,880...159,920,627
G
Apbb2
amyloid beta precursor protein binding family B member 2
involved_in
ISO
(PMID:25757569)
RGD
PMID:25757569
NCBI chr14:41,557,918...41,878,622
Ensembl chr14:41,557,972...41,877,495
G
Bdkrb2
bradykinin receptor B2
involved_in
IEA
GO_REF:0000002
InterPro
GO_REF:0000002
NCBI chr 6:130,237,055...130,267,205
Ensembl chr 6:124,472,566...124,502,497
G
Cacna1c
calcium voltage-gated channel subunit alpha1 C
acts_upstream_of_or_within
ISO
MGI:2389040|MGI:2674119 (PMID:16636102)
RGD
PMID:16636102
NCBI chr 4:153,431,169...154,051,932
Ensembl chr 4:151,764,138...152,379,648
G
Calca
calcitonin-related polypeptide alpha
acts_upstream_of
ISO
(PMID:9322931)
RGD
PMID:9322931
NCBI chr 1:178,312,636...178,317,588
Ensembl chr 1:168,878,214...168,883,105
G
Chrm3
cholinergic receptor, muscarinic 3
acts_upstream_of acts_upstream_of_or_within
ISO
(PMID:12925702) MGI:1888740 (PMID:10944224)
RGD
PMID:10944224 PMID:12925702
NCBI chr17:64,696,549...65,158,622
Ensembl chr17:60,005,202...60,467,278
G
Chrnb2
cholinergic receptor nicotinic beta 2 subunit
acts_upstream_of_or_within
ISO
MGI:87892 (PMID:10531434)
RGD
PMID:10531434
NCBI chr 2:177,479,091...177,487,306
Ensembl chr 2:175,181,402...175,189,619
G
Chrnb4
cholinergic receptor nicotinic beta 4 subunit
acts_upstream_of_or_within
ISO
MGI:87891 (PMID:10531434)
RGD
PMID:10531434
NCBI chr 8:64,312,644...64,333,319
Ensembl chr 8:55,418,313...55,437,027
G
Edn1
endothelin 1
acts_upstream_of
ISO
(PMID:8010105)
RGD
PMID:8010105
NCBI chr17:22,660,799...22,666,687
Ensembl chr17:22,454,420...22,460,885
G
Edn2
endothelin 2
acts_upstream_of
ISO
(PMID:2768235)
RGD
PMID:2768235
NCBI chr 5:139,036,576...139,042,074
Ensembl chr 5:133,751,217...133,756,814
G
Fkbp1b
FKBP prolyl isomerase 1B
acts_upstream_of_or_within
ISO
MGI:2182644 (PMID:14592808)
RGD
PMID:14592808
NCBI chr 6:33,551,583...33,570,055
Ensembl chr 6:27,838,802...27,848,653
G
Htr7
5-hydroxytryptamine receptor 7
involved_in
IEA
GO_REF:0000002
InterPro
GO_REF:0000002
NCBI chr 1:243,049,064...243,173,636
Ensembl chr 1:233,636,452...233,760,626
G
Myh11
myosin heavy chain 11
acts_upstream_of_or_within
ISO
MGI:2656492|MGI:3576856 (PMID:10854329), (PMID:11715025), (PMID:12562924)
RGD
PMID:10854329 PMID:11715025 PMID:12562924
NCBI chr10:1,250,554...1,345,681
Ensembl chr10:743,685...838,459
G
Mylk
myosin light chain kinase
involved_in
ISO
(PMID:18586037)
RGD
PMID:18586037
NCBI chr11:79,288,243...79,535,450
Ensembl chr11:65,783,008...66,030,261
G
Nmur1
neuromedin U receptor 1
involved_in
ISO IEA
(PMID:10899166) GO_REF:0000107
RGD Ensembl
PMID:10899166
GO_REF:0000107
NCBI chr 9:94,480,002...94,486,147
Ensembl chr 9:87,033,279...87,036,684
G
Pde4b
phosphodiesterase 4B
NOT|acts_upstream_of_or_within
ISO
MGI:2181444 (PMID:14519662)
RGD
PMID:14519662
NCBI chr 5:122,028,956...122,598,267
Ensembl chr 5:116,799,971...117,367,696
G
Pde4d
phosphodiesterase 4D
acts_upstream_of_or_within
ISO
MGI:2451168 (PMID:14519662)
RGD
PMID:14519662
NCBI chr 2:41,748,337...43,262,567
Ensembl chr 2:40,019,933...41,525,884
G
Rock2
Rho-associated coiled-coil containing protein kinase 2
involved_in
IEA
GO_REF:0000002
InterPro
GO_REF:0000002
NCBI chr 6:45,407,823...45,502,773
Ensembl chr 6:39,679,082...39,774,031
G
Tbxa2r
thromboxane A2 receptor
acts_upstream_of
ISO
(PMID:12925702)
RGD
PMID:12925702
NCBI chr 7:9,034,077...9,041,489
Ensembl chr 7:8,383,378...8,388,176
G
Tpcn2
two pore segment channel 2
involved_in
ISO
(PMID:20547763)
RGD
PMID:20547763
NCBI chr 1:209,845,827...209,875,561
Ensembl chr 1:200,416,540...200,446,236
G
Agt
angiotensinogen
IDA
RGD
PMID:21076237
RGD:5129195
NCBI chr19:69,426,540...69,447,017
Ensembl chr19:52,529,185...52,540,977
G
Bbs2
Bardet-Biedl syndrome 2
acts_upstream_of_or_within
ISO
MGI:3521669 (PMID:20852044)
RGD
PMID:20852044
NCBI chr19:10,915,566...10,950,911
Ensembl chr19:10,909,619...10,944,993
G
Cacna1g
calcium voltage-gated channel subunit alpha1 G
IMP
RGD
PMID:18759855
RGD:2308879
NCBI chr10:79,851,886...79,919,926
Ensembl chr10:79,355,008...79,422,752
G
Cd38
CD38 molecule
IMP
RGD
PMID:21431168
RGD:13506923
NCBI chr14:71,384,532...71,424,794
Ensembl chr14:67,172,063...67,211,986
G
Edn1
endothelin 1
involved_in
IDA ISO
(PMID:8982507)
RGD
PMID:8982507 PMID:7586220
RGD:8662314
NCBI chr17:22,660,799...22,666,687
Ensembl chr17:22,454,420...22,460,885
G
Edn2
endothelin 2
involved_in
ISO IEA
(PMID:8982507) GO_REF:0000107
RGD Ensembl
PMID:8982507
GO_REF:0000107
NCBI chr 5:139,036,576...139,042,074
Ensembl chr 5:133,751,217...133,756,814
G
Edn3
endothelin 3
NOT|involved_in
ISO
(PMID:8982507)
RGD
PMID:8982507
NCBI chr 3:183,980,458...184,004,958
Ensembl chr 3:163,562,520...163,585,093
G
Ednra
endothelin receptor type A
involved_in
ISO IEA
(PMID:8982507) GO_REF:0000107
RGD Ensembl
PMID:8982507
GO_REF:0000107
NCBI chr19:47,137,360...47,207,961
Ensembl chr19:30,233,571...30,297,049
G
Grip2
glutamate receptor interacting protein 2
acts_upstream_of_or_within
ISO
MGI:3035933 (PMID:23117660)
RGD
PMID:23117660
NCBI chr 4:124,271,456...124,356,538
Ensembl chr 4:124,271,456...124,321,268
G
Htr2a
5-hydroxytryptamine receptor 2A
IMP
RGD
PMID:14752059
RGD:7257678
NCBI chr15:56,360,647...56,428,703
Ensembl chr15:49,950,804...50,020,928
G
Mkks
MKKS centrosomal shuttling protein
acts_upstream_of_or_within
ISO
MGI:3526444 (PMID:20852044)
RGD
PMID:20852044
NCBI chr 3:144,654,563...144,672,831
Ensembl chr 3:124,201,877...124,220,162
G
Scnn1b
sodium channel epithelial 1 subunit beta
involved_in acts_upstream_of_or_within
IEA ISO
GO_REF:0000107 MGI:2179831 (PMID:19553501)
Ensembl RGD
PMID:19553501
GO_REF:0000107
NCBI chr 1:185,861,326...185,915,717
Ensembl chr 1:176,430,103...176,484,451
G
Smpd3
sphingomyelin phosphodiesterase 3
IMP
RGD
PMID:19088082
RGD:10042965
NCBI chr19:51,072,209...51,155,639
Ensembl chr19:34,162,341...34,245,749
G
Sulf1
sulfatase 1
involved_in
IEA ISO ISS
GO_REF:0000104 UniProtKB:Q8CFG0 (PMID:17720696) GO_REF:0000024
UniProt RGD
PMID:17720696
GO_REF:0000024 GO_REF:0000104
NCBI chr 5:11,145,950...11,308,622
Ensembl chr 5:6,362,911...6,525,584
G
Sulf2
sulfatase 2
involved_in
ISO
UniProtKB:Q8K007 (PMID:17720696)
RGD
PMID:17720696
NCBI chr 3:175,241,322...175,323,808
Ensembl chr 3:154,822,085...154,904,415
G
Htr1d
5-hydroxytryptamine receptor 1D
involved_in
ISO
(PMID:9186750)
RGD
PMID:9186750
NCBI chr 5:148,656,252...148,676,532
Ensembl chr 5:148,674,495...148,675,619
G
Htr2b
5-hydroxytryptamine receptor 2B
involved_in
ISS ISO IEA
GO_REF:0000024 (PMID:7599919), (PMID:9186750) GO_REF:0000107
UniProt RGD Ensembl
PMID:7599919 PMID:9186750
GO_REF:0000024 GO_REF:0000107
NCBI chr 9:94,184,442...94,206,851
Ensembl chr 9:86,742,102...86,755,108
G
Ptger3
prostaglandin E receptor 3
involved_in
IMP IBA
GO_REF:0000033
GO_Central RGD
PMID:24170253
GO_REF:0000033, RGD:10043193
NCBI chr 2:249,264,985...249,409,966
Ensembl chr 2:246,606,183...246,684,434
G
Tacr2
tachykinin receptor 2
IMP
RGD
PMID:11275010
RGD:5147481
NCBI chr20:30,751,645...30,766,181
Ensembl chr20:30,208,907...30,223,446
G
Kcnma1
potassium calcium-activated channel subfamily M alpha 1
IMP
RGD
PMID:23647678
RGD:10412032
NCBI chr15:351,065...1,057,117
Ensembl chr15:302,214...1,001,198
G
Ptger3
prostaglandin E receptor 3
IDA
RGD
PMID:11991626
RGD:10003093
NCBI chr 2:249,264,985...249,409,966
Ensembl chr 2:246,606,183...246,684,434
G
Ptger4
prostaglandin E receptor 4
IDA
RGD
PMID:11991626
RGD:10003093
NCBI chr 2:56,061,699...56,074,594
Ensembl chr 2:54,335,424...54,346,670
G
Adrb1
adrenoceptor beta 1
IMP
RGD
PMID:18306009
RGD:5129131
NCBI chr 1:265,777,103...265,780,114
Ensembl chr 1:255,771,597...255,807,259
G
Adrb2
adrenoceptor beta 2
involved_in acts_upstream_of_or_within
IEA ISO
GO_REF:0000107 MGI:88398|MGI:98496 (PMID:12925702)
Ensembl RGD
PMID:12925702
GO_REF:0000107
NCBI chr18:57,912,760...57,914,802
Ensembl chr18:55,502,903...55,644,512
G
Calca
calcitonin-related polypeptide alpha
acts_upstream_of_or_within
IMP ISO
(PMID:9322931)
RGD
PMID:9322931 PMID:11230364
RGD:68890
NCBI chr 1:178,312,636...178,317,588
Ensembl chr 1:168,878,214...168,883,105
G
Calcrl
calcitonin receptor like receptor
IMP
RGD
PMID:17363466
RGD:1625357
NCBI chr 3:89,835,071...89,932,616
Ensembl chr 3:69,430,120...69,525,910
G
Irag1
inositol 1,4,5-triphosphate receptor associated 1
acts_upstream_of_or_within
ISO
MGI:3525059 (PMID:15483626)
RGD
PMID:15483626
NCBI chr 1:164,981,716...165,094,232
Ensembl chr 1:164,981,716...165,094,176
G
Prkg1
protein kinase cGMP-dependent 1
acts_upstream_of_or_within
ISO
MGI:2181586 (PMID:15483626)
RGD
PMID:15483626
NCBI chr 1:237,818,950...239,052,184
Ensembl chr 1:228,408,947...229,639,080
G
Ptgs2
prostaglandin-endoperoxide synthase 2
IMP
RGD
PMID:21051526
RGD:5135055
NCBI chr13:64,714,063...64,722,320
Ensembl chr13:62,163,932...62,172,188
G
Adra2a
adrenoceptor alpha 2A
IMP
RGD
PMID:17664026
RGD:6893570
NCBI chr 1:263,066,780...263,069,580
Ensembl chr 1:253,060,218...253,064,365
G
Adra2c
adrenoceptor alpha 2C
IMP
RGD
PMID:17664026
RGD:6893570
NCBI chr14:79,695,514...79,697,476
Ensembl chr14:75,471,143...75,472,846
G
Arhgap42
Rho GTPase activating protein 42
acts_upstream_of_or_within
ISO
MGI:3871380 (PMID:24335996)
RGD
PMID:24335996
NCBI chr 8:6,154,759...6,384,497
Ensembl chr 8:6,156,865...6,384,870
G
Dock4
dedicator of cytokinesis 4
involved_in
ISO
(PMID:22158624)
RGD
PMID:22158624
NCBI chr 6:63,240,050...63,629,772
Ensembl chr 6:57,512,908...57,901,855
G
Dock5
dedicator of cytokinesis 5
involved_in
ISO
(PMID:22158624)
RGD
PMID:22158624
NCBI chr15:41,979,728...42,158,733
Ensembl chr15:41,979,729...42,158,649
G
Stub1
STIP1 homology and U-box containing protein 1
involved_in
IMP
PMID:19237536
UniProt
PMID:19237536
RGD:401901238
NCBI chr10:15,355,278...15,357,559
Ensembl chr10:14,850,765...14,853,046
G
Agt
angiotensinogen
acts_upstream_of_or_within
ISO
MGI:2183545 (PMID:9788961)
RGD
PMID:9788961
NCBI chr19:69,426,540...69,447,017
Ensembl chr19:52,529,185...52,540,977
G
Dlg1
discs large MAGUK scaffold protein 1
involved_in acts_upstream_of_or_within
IEA ISO
GO_REF:0000107 MGI:3699270 (PMID:17172448)
Ensembl RGD
PMID:17172448
GO_REF:0000107
NCBI chr11:82,416,853...82,607,797
Ensembl chr11:68,911,883...69,102,689
G
Drd1
dopamine receptor D1
involved_in acts_upstream_of_or_within
IEA ISO
GO_REF:0000107 MGI:94924 (PMID:15272078)
Ensembl RGD
PMID:15272078
GO_REF:0000107
NCBI chr17:10,545,488...10,550,029
Ensembl chr17:10,540,558...10,545,002
G
Drd2
dopamine receptor D2
acts_upstream_of_or_within
ISO
MGI:2388386|MGI:99578 (PMID:15272078), (PMID:16525059)
RGD
PMID:15272078 PMID:16525059
NCBI chr 8:58,605,403...58,669,339
Ensembl chr 8:49,708,927...49,772,875
G
Gdnf
glial cell derived neurotrophic factor
involved_in acts_upstream_of_or_within
ISS ISO IEA
GO_REF:0000024 (PMID:8657307) MGI:2136846 (PMID:11774071) GO_REF:0000107
UniProt RGD Ensembl
PMID:8657307 PMID:11774071
GO_REF:0000024 GO_REF:0000107
NCBI chr 2:58,621,327...58,647,242
Ensembl chr 2:56,895,010...56,917,209
G
Neurog1
neurogenin 1
involved_in
ISO
UniProtKB:Q6ZNK6|UniProtKB:Q8TF63 (PMID:23419067)
RGD
PMID:23419067
NCBI chr17:8,368,096...8,369,615
Ensembl chr17:8,362,821...8,364,571
G
Npy1r
neuropeptide Y receptor Y1
IMP
RGD
PMID:12919938
RGD:1642317
NCBI chr16:23,037,788...23,047,330
Ensembl chr16:23,037,789...23,046,759
G
P2rx2
purinergic receptor P2X 2
involved_in acts_upstream_of_or_within
IEA ISO
GO_REF:0000107 MGI:2687349 (PMID:12937291)
Ensembl RGD
PMID:12937291
GO_REF:0000107
NCBI chr12:51,999,107...52,002,627
Ensembl chr12:46,339,549...46,342,891
G
P2rx3
purinergic receptor P2X 3
involved_in acts_upstream_of_or_within
IEA ISO
GO_REF:0000107 MGI:1934019 (PMID:12813150)
Ensembl RGD
PMID:12813150
GO_REF:0000107
NCBI chr 3:90,487,506...90,531,315
Ensembl chr 3:70,080,851...70,125,178
G
Sstr2
somatostatin receptor 2
IMP
RGD
PMID:12504886
RGD:727490
NCBI chr10:99,163,353...99,170,519
Ensembl chr10:98,664,216...98,674,351
G
Tifab
TIFA inhibitor
involved_in
ISO
UniProtKB:Q8TF63|UniProtKB:Q92886 (PMID:23419067)
RGD
PMID:23419067
NCBI chr17:8,438,622...8,441,750
Ensembl chr17:8,431,635...8,436,592
G
Kit
KIT proto-oncogene receptor tyrosine kinase
IMP
RGD
PMID:17322067
RGD:12910822
NCBI chr14:32,901,615...32,978,895
Ensembl chr14:32,548,877...32,624,652
G
Ptger3
prostaglandin E receptor 3
IMP
RGD
PMID:24170253
RGD:10043193
NCBI chr 2:249,264,985...249,409,966
Ensembl chr 2:246,606,183...246,684,434
G
Ghrl
ghrelin and obestatin prepropeptide
IDA
RGD
PMID:15890336
RGD:12907565
NCBI chr 4:148,421,315...148,431,128
Ensembl chr 4:146,865,712...146,869,621
G
Ptafr
platelet-activating factor receptor
IMP
RGD
PMID:10821044
RGD:10043148
NCBI chr 5:150,049,322...150,079,060
Ensembl chr 5:144,765,976...144,795,251
G
Spx
spexin hormone
involved_in
ISO IBA ISS
(PMID:17284679) GO_REF:0000033
RGD GO_Central
PMID:17284679 PMID:17284679
GO_REF:0000033, RGD:12907558
NCBI chr 4:177,087,053...177,093,091
Ensembl chr 4:175,356,247...175,362,082
G
Oxt
oxytocin/neurophysin I prepropeptide
IDA
RGD
PMID:19258489
RGD:2304084
NCBI chr 3:138,235,754...138,236,594
Ensembl chr 3:117,782,650...117,783,490
G
Pawr
pro-apoptotic WT1 regulator
IDA
RGD
PMID:14724155
RGD:9835340
NCBI chr 7:45,531,480...45,611,492
Ensembl chr 7:43,645,084...43,725,028
G
Kit
KIT proto-oncogene receptor tyrosine kinase
IMP
RGD
PMID:9832052
RGD:12910753
NCBI chr14:32,901,615...32,978,895
Ensembl chr14:32,548,877...32,624,652
G
Ghrl
ghrelin and obestatin prepropeptide
IDA
RGD
PMID:15890336 PMID:21874246
RGD:12907565 , RGD:12910732
NCBI chr 4:148,421,315...148,431,128
Ensembl chr 4:146,865,712...146,869,621
G
Ghsr
growth hormone secretagogue receptor
IMP
RGD
PMID:21874246 PMID:15890336
RGD:12910732 , RGD:12907565
NCBI chr 2:112,196,158...112,201,666
Ensembl chr 2:110,268,489...110,271,865
G
Kit
KIT proto-oncogene receptor tyrosine kinase
IMP
RGD
PMID:7542218
RGD:12910748
NCBI chr14:32,901,615...32,978,895
Ensembl chr14:32,548,877...32,624,652
G
Ada
adenosine deaminase
involved_in acts_upstream_of_or_within
IEA ISO
GO_REF:0000107 MGI:1857117|MGI:2683027 (PMID:18340377)
Ensembl RGD
PMID:18340377
GO_REF:0000107
NCBI chr 3:172,818,174...172,842,283
Ensembl chr 3:152,398,747...152,447,088
G
Adra1a
adrenoceptor alpha 1A
involved_in
IMP ISO IEA
(PMID:21335239) GO_REF:0000107
RGD Ensembl
PMID:21335239 PMID:19041301
GO_REF:0000107, RGD:5688345
NCBI chr15:45,005,648...45,111,416
Ensembl chr15:40,832,534...40,927,500
G
Chrm3
cholinergic receptor, muscarinic 3
acts_upstream_of_or_within
ISO
(PMID:12925702)
RGD
PMID:12925702
NCBI chr17:64,696,549...65,158,622
Ensembl chr17:60,005,202...60,467,278
G
Cttn
cortactin
involved_in
ISO IEA
UniProtKB:P07737 (PMID:24700464) GO_REF:0000107
RGD Ensembl
PMID:24700464
GO_REF:0000107
NCBI chr 1:209,029,048...209,064,577
Ensembl chr 1:199,599,710...199,635,164
G
Edn1
endothelin 1
involved_in acts_upstream_of_or_within
IDA IBA ISO IMP
GO_REF:0000033 (PMID:8010105)
GO_Central RGD
PMID:8010105 PMID:12396026 PMID:8893723
GO_REF:0000033, RGD:1581797 , RGD:8662282
NCBI chr17:22,660,799...22,666,687
Ensembl chr17:22,454,420...22,460,885
G
Edn2
endothelin 2
involved_in acts_upstream_of_or_within
IDA IBA ISO IEA
GO_REF:0000033 (PMID:2768235) GO_REF:0000107
GO_Central RGD Ensembl
PMID:2768235 PMID:12396026
GO_REF:0000033 GO_REF:0000107, RGD:1581797
NCBI chr 5:139,036,576...139,042,074
Ensembl chr 5:133,751,217...133,756,814
G
Edn3
endothelin 3
involved_in
IBA
GO_REF:0000033
GO_Central
GO_REF:0000033
NCBI chr 3:183,980,458...184,004,958
Ensembl chr 3:163,562,520...163,585,093
G
F2r
coagulation factor II (thrombin) receptor
IDA
RGD
PMID:14699501
RGD:1582292
NCBI chr 2:28,604,066...28,620,579
Ensembl chr 2:26,868,404...26,885,870
G
Itga2
integrin subunit alpha 2
IMP
SMC-containing collagen lattice contraction
RGD
PMID:16263112
RGD:2307398
NCBI chr 2:48,253,412...48,354,509
Ensembl chr 2:46,523,948...46,621,481
G
Myocd
myocardin
involved_in
ISO IEA
(PMID:17215356) GO_REF:0000107
RGD Ensembl
PMID:17215356
GO_REF:0000107
NCBI chr10:50,332,356...50,426,819
Ensembl chr10:49,836,641...49,927,627
G
Nmu
neuromedin U
involved_in
IMP IBA IDA
GO_REF:0000033 PMID:3178840
GO_Central RGD
PMID:16474416 PMID:3178840
GO_REF:0000033, RGD:1642122 , RGD:13461757
NCBI chr14:32,198,789...32,226,397
Ensembl chr14:31,844,728...31,872,192
G
Npnt
nephronectin
involved_in
ISO
(PMID:21335239)
RGD
PMID:21335239
NCBI chr 2:224,065,191...224,133,567
Ensembl chr 2:221,391,153...221,459,401
G
Npy2r
neuropeptide Y receptor Y2
IMP
neuropeptide Y- and peptide YY-induced contraction in ascending and descending colon
RGD
PMID:10422644
RGD:1642606
NCBI chr 2:167,901,999...167,912,165
Ensembl chr 2:167,903,879...167,905,024
G
Prok2
prokineticin 2
involved_in
ISO
(PMID:11259612)
RGD
PMID:11259612
NCBI chr 4:133,903,210...133,918,126
Ensembl chr 4:132,347,103...132,361,385
G
Ptafr
platelet-activating factor receptor
IMP
RGD
PMID:10821044
RGD:10043148
NCBI chr 5:150,049,322...150,079,060
Ensembl chr 5:144,765,976...144,795,251
G
Ptgs1
prostaglandin-endoperoxide synthase 1
IMP
RGD
PMID:18480553
RGD:2300247
NCBI chr 3:39,981,419...40,002,993
Ensembl chr 3:19,584,015...19,605,586
G
Ptgs2
prostaglandin-endoperoxide synthase 2
IMP
RGD
PMID:18480553
RGD:2300247
NCBI chr13:64,714,063...64,722,320
Ensembl chr13:62,163,932...62,172,188
G
Rhoa
ras homolog family member A
IMP
RGD
PMID:17379756
RGD:1642962
NCBI chr 8:117,870,548...117,904,303
Ensembl chr 8:108,991,954...109,025,746
G
Sphk1
sphingosine kinase 1
involved_in
ISO IEA
(PMID:12847068) GO_REF:0000107
RGD Ensembl
PMID:12847068
GO_REF:0000107
NCBI chr10:102,257,413...102,263,086
Ensembl chr10:101,758,711...101,764,240
G
Srf
serum response factor
involved_in
ISO
(PMID:17215356)
RGD
PMID:17215356
NCBI chr 9:21,924,050...21,933,338
Ensembl chr 9:14,426,472...14,435,733
G
Tbxa2r
thromboxane A2 receptor
acts_upstream_of_or_within
ISO
(PMID:12925702)
RGD
PMID:12925702
NCBI chr 7:9,034,077...9,041,489
Ensembl chr 7:8,383,378...8,388,176
G
Ptger3
prostaglandin E receptor 3
IMP
RGD
PMID:18562635
RGD:10043314
NCBI chr 2:249,264,985...249,409,966
Ensembl chr 2:246,606,183...246,684,434
G
Nmu
neuromedin U
involved_in
IDA
PMID:2055247
UniProt
PMID:2055247
RGD:13461751
NCBI chr14:32,198,789...32,226,397
Ensembl chr14:31,844,728...31,872,192
G
Abat
4-aminobutyrate aminotransferase
IMP
RGD
PMID:12742000
RGD:10047059
NCBI chr10:7,503,351...7,599,474
Ensembl chr10:6,999,819...7,092,835
G
Adra2b
adrenoceptor alpha 2B
IMP
RGD
PMID:19634638 PMID:17664026
RGD:2313546 , RGD:6893570
NCBI chr 3:135,038,481...135,042,527
Ensembl chr 3:114,585,169...114,589,355
G
Gper1
G protein-coupled estrogen receptor 1
involved_in
ISO IEA ISS
(PMID:21427217) GO_REF:0000107 GO_REF:0000024
RGD Ensembl UniProt
PMID:21427217
GO_REF:0000024 GO_REF:0000107
NCBI chr12:20,331,073...20,336,527
Ensembl chr12:15,217,442...15,221,889
G
Lck
LCK proto-oncogene, Src family tyrosine kinase
IMP
RGD
PMID:19208792
RGD:2316554
NCBI chr 5:147,172,642...147,201,267
Ensembl chr 5:141,888,326...141,903,794
G
Oxt
oxytocin/neurophysin I prepropeptide
IDA
RGD
PMID:19164477
RGD:2303954
NCBI chr 3:138,235,754...138,236,594
Ensembl chr 3:117,782,650...117,783,490
G
Oxtr
oxytocin receptor
IMP
RGD
PMID:19164477
RGD:2303954
NCBI chr 4:147,154,374...147,171,723
Ensembl chr 4:145,599,561...145,614,674
G
Tacr1
tachykinin receptor 1
IDA
RGD
PMID:12390879
RGD:2305937
NCBI chr 4:116,478,617...116,647,492
Ensembl chr 4:114,920,844...115,089,733
G
Tacr2
tachykinin receptor 2
IDA
RGD
PMID:12390879
RGD:2305937
NCBI chr20:30,751,645...30,766,181
Ensembl chr20:30,208,907...30,223,446
G
Tacr3
tachykinin receptor 3
IDA
RGD
PMID:12390879
RGD:2305937
NCBI chr 2:225,940,497...226,037,756
Ensembl chr 2:223,266,536...223,363,791
G
Chrm3
cholinergic receptor, muscarinic 3
IMP
RGD
PMID:8428203
RGD:2303387
NCBI chr17:64,696,549...65,158,622
Ensembl chr17:60,005,202...60,467,278
G
Mir21
microRNA 21
involved_in
ISO
(PMID:22158624)
RGD
PMID:22158624
NCBI chr10:71,902,600...71,902,691
Ensembl chr10:71,405,257...71,405,348
G
Rhoa
ras homolog family member A
acts_upstream_of_or_within
ISO
(PMID:24335996)
RGD
PMID:24335996
NCBI chr 8:117,870,548...117,904,303
Ensembl chr 8:108,991,954...109,025,746
G
Ghsr
growth hormone secretagogue receptor
IMP
RGD
PMID:16873401
RGD:1625276
NCBI chr 2:112,196,158...112,201,666
Ensembl chr 2:110,268,489...110,271,865
G
Adrb2
adrenoceptor beta 2
involved_in
IEA
GO_REF:0000002
InterPro
GO_REF:0000002
NCBI chr18:57,912,760...57,914,802
Ensembl chr18:55,502,903...55,644,512
G
Atp1a2
ATPase Na+/K+ transporting subunit alpha 2
acts_upstream_of_or_within
ISO
MGI:2451291 (PMID:14627611)
RGD
PMID:14627611
NCBI chr13:87,261,964...87,286,911
Ensembl chr13:84,729,601...84,754,544
G
Cav1
caveolin 1
involved_in acts_upstream_of_or_within
IEA ISO
GO_REF:0000107 MGI:2180364 (PMID:16782699), (PMID:17098833)
Ensembl RGD
PMID:16782699 PMID:17098833
GO_REF:0000107
NCBI chr 4:46,606,538...46,639,616
Ensembl chr 4:45,634,918...45,673,705
G
Chrm2
cholinergic receptor, muscarinic 2
involved_in
IDA IBA
GO_REF:0000033
GO_Central RGD
PMID:12185001
GO_REF:0000033, RGD:724728
NCBI chr 4:65,981,136...66,116,128
Ensembl chr 4:65,014,144...65,149,103
G
Chrm3
cholinergic receptor, muscarinic 3
involved_in
IBA
GO_REF:0000033
GO_Central
GO_REF:0000033
NCBI chr17:64,696,549...65,158,622
Ensembl chr17:60,005,202...60,467,278
G
Chrna3
cholinergic receptor nicotinic alpha 3 subunit
acts_upstream_of_or_within
ISO
MGI:2155602 (PMID:10318955), (PMID:10771006)
RGD
PMID:10318955 PMID:10771006
NCBI chr 8:64,297,755...64,311,251
Ensembl chr 8:55,401,702...55,415,165
G
Chrnb4
cholinergic receptor nicotinic beta 4 subunit
acts_upstream_of_or_within
ISO
MGI:2158716 (PMID:10771006)
RGD
PMID:10771006
NCBI chr 8:64,312,644...64,333,319
Ensembl chr 8:55,418,313...55,437,027
G
Flt1
Fms related receptor tyrosine kinase 1
IDA
RGD
PMID:12062723
RGD:1582498
NCBI chr12:12,333,050...12,504,750
Ensembl chr12:7,297,292...7,468,626
G
Nmu
neuromedin U
involved_in
IEA
GO_REF:0000002
InterPro
GO_REF:0000002
NCBI chr14:32,198,789...32,226,397
Ensembl chr14:31,844,728...31,872,192
G
Ormdl3
ORMDL sphingolipid biosynthesis regulator 3
involved_in acts_upstream_of
IEA ISO
GO_REF:0000107 (PMID:28275141)
Ensembl RGD
PMID:28275141
GO_REF:0000107
NCBI chr10:84,086,317...84,092,673
Ensembl chr10:83,590,071...83,598,620
G
P2rx1
purinergic receptor P2X 1
acts_upstream_of_or_within
ISO
MGI:2181608 (PMID:10638758), (PMID:11570704)
RGD
PMID:10638758 PMID:11570704
NCBI chr10:58,117,107...58,132,167
Ensembl chr10:57,618,586...57,633,623
G
Shc1
SHC adaptor protein 1
IMP
RGD
PMID:27270176
RGD:12792230
NCBI chr 2:177,135,649...177,147,257
Ensembl chr 2:174,837,930...174,849,536
G
Tnni3
troponin I3, cardiac type
IMP
RGD
PMID:16236710
RGD:1580418
NCBI chr 1:78,342,571...78,346,255
Ensembl chr 1:69,299,900...69,303,580
G
Setd3
SET domain containing 3, actin N3(tau)-histidine methyltransferase
involved_in
ISS IBA ISO
GO_REF:0000024 GO_REF:0000033 (PMID:30626964)
UniProt GO_Central RGD
PMID:30626964
GO_REF:0000024 GO_REF:0000033
NCBI chr 6:132,787,478...132,854,421
Ensembl chr 6:127,023,058...127,090,008
G
Tacr1
tachykinin receptor 1
involved_in
ISO
(PMID:15647454)
RGD
PMID:15647454
NCBI chr 4:116,478,617...116,647,492
Ensembl chr 4:114,920,844...115,089,733
G
Tacr2
tachykinin receptor 2
involved_in
ISO
(PMID:15647454)
RGD
PMID:15647454
NCBI chr20:30,751,645...30,766,181
Ensembl chr20:30,208,907...30,223,446
G
Adra2b
adrenoceptor alpha 2B
IMP
RGD
PMID:18054907
RGD:2313547
NCBI chr 3:135,038,481...135,042,527
Ensembl chr 3:114,585,169...114,589,355
G
Atp2b1
ATPase plasma membrane Ca2+ transporting 1
involved_in
ISS ISO IEA
GO_REF:0000024 (PMID:24805951) GO_REF:0000107
UniProt RGD Ensembl
PMID:24805951
GO_REF:0000024 GO_REF:0000107
NCBI chr 7:35,622,267...35,731,904
Ensembl chr 7:33,735,871...33,843,295
G
Map2k1
mitogen activated protein kinase kinase 1
IMP
inhibition decreases both calcium-stimulated and unstimulated myogenic tone in middle cerebral arteries (p<0.001)
RGD
PMID:10198244
RGD:2293329
NCBI chr 8:73,578,747...73,650,184
Ensembl chr 8:64,683,449...64,755,147
G
P2rx1
purinergic receptor P2X 1
acts_upstream_of_or_within
ISO
MGI:2181608 (PMID:16920810)
RGD
PMID:16920810
NCBI chr10:58,117,107...58,132,167
Ensembl chr10:57,618,586...57,633,623
G
Zdhhc21
zinc finger DHHC-type palmitoyltransferase 21
involved_in
ISO
(PMID:26715683)
RGD
PMID:26715683
NCBI chr 5:97,227,621...97,286,866
Ensembl chr 5:97,229,345...97,286,537
G
Adrb2
adrenoceptor beta 2
enables
IDA
salbutamol, isoproterenol, clenbuterol, norepinephrine
RGD
PMID:6289140
RGD:2301944
NCBI chr18:57,912,760...57,914,802
Ensembl chr18:55,502,903...55,644,512
G
Htr7
5-hydroxytryptamine receptor 7
IMP
RGD
PMID:31125290
RGD:14696717
NCBI chr 1:243,049,064...243,173,636
Ensembl chr 1:233,636,452...233,760,626
G
Adora2b
adenosine A2B receptor
acts_upstream_of_or_within involved_in
ISO IEA
MGI:3773754 (PMID:18340377) GO_REF:0000107
RGD Ensembl
PMID:18340377
GO_REF:0000107
NCBI chr10:47,439,712...47,456,092
Ensembl chr10:46,940,384...46,956,772
G
Gucy1a1
guanylate cyclase 1 soluble subunit alpha 1
acts_upstream_of_or_within involved_in
ISO IEA
MGI:3640802 (PMID:16614755) GO_REF:0000107
RGD Ensembl
PMID:16614755
GO_REF:0000107
NCBI chr 2:169,716,684...169,780,360
Ensembl chr 2:167,418,640...167,481,671
G
Irag1
inositol 1,4,5-triphosphate receptor associated 1
acts_upstream_of_or_within
ISO
MGI:3525059 (PMID:15483626)
RGD
PMID:15483626
NCBI chr 1:164,981,716...165,094,232
Ensembl chr 1:164,981,716...165,094,176
G
Kcnma1
potassium calcium-activated channel subfamily M alpha 1
involved_in acts_upstream_of_or_within
ISO
(PMID:25139746) MGI:3050114 (PMID:15867178)
RGD
PMID:15867178 PMID:25139746
NCBI chr15:351,065...1,057,117
Ensembl chr15:302,214...1,001,198
G
Prkg1
protein kinase cGMP-dependent 1
acts_upstream_of_or_within
ISO
MGI:2181586 (PMID:15483626)
RGD
PMID:15483626
NCBI chr 1:237,818,950...239,052,184
Ensembl chr 1:228,408,947...229,639,080
G
Rgs2
regulator of G-protein signaling 2
involved_in
ISO
(PMID:14608379)
RGD
PMID:14608379
NCBI chr13:58,350,063...58,352,666
Ensembl chr13:55,798,829...55,802,385
G
Sod1
superoxide dismutase 1
involved_in acts_upstream_of_or_within
ISS ISO
GO_REF:0000024 MGI:1857873 (PMID:12433839), (PMID:14679182)
UniProt RGD
PMID:12433839 PMID:14679182
GO_REF:0000024
NCBI chr11:42,942,742...42,948,399
Ensembl chr11:29,456,558...29,462,249
G
Trpc1
transient receptor potential cation channel, subfamily C, member 1
involved_in
ISO
(PMID:25139746)
RGD
PMID:25139746
NCBI chr 8:105,142,931...105,193,842
Ensembl chr 8:96,263,329...96,314,276
G
Trpv4
transient receptor potential cation channel, subfamily V, member 4
involved_in
ISO
(PMID:25139746)
RGD
PMID:25139746
NCBI chr12:47,599,161...47,638,143
Ensembl chr12:41,938,560...41,977,517
G
Scn11a
sodium voltage-gated channel alpha subunit 11
involved_in
IEA ISO
GO_REF:0000107 MGI:5558025 (PMID:32817686)
Ensembl RGD
PMID:32817686
GO_REF:0000107
NCBI chr 8:128,374,441...128,444,718
Ensembl chr 8:119,496,769...119,567,044
G
Cacna1c
calcium voltage-gated channel subunit alpha1 C
acts_upstream_of_or_within
ISO
MGI:2674119 (PMID:15132976)
RGD
PMID:15132976
NCBI chr 4:153,431,169...154,051,932
Ensembl chr 4:151,764,138...152,379,648
G
Kcnma1
potassium calcium-activated channel subfamily M alpha 1
involved_in acts_upstream_of_or_within
ISO IEA
(PMID:11641143) MGI:3053849 (PMID:15827347) GO_REF:0000107
RGD Ensembl
PMID:11641143 PMID:15827347
GO_REF:0000107
NCBI chr15:351,065...1,057,117
Ensembl chr15:302,214...1,001,198
G
Tacr1
tachykinin receptor 1
IMP
RGD
PMID:18945947
RGD:2304258
NCBI chr 4:116,478,617...116,647,492
Ensembl chr 4:114,920,844...115,089,733
G
Trpv1
transient receptor potential cation channel, subfamily V, member 1
acts_upstream_of_or_within
ISO
MGI:1934023 (PMID:12161756)
RGD
PMID:12161756
NCBI chr10:58,349,936...58,375,021
Ensembl chr10:57,851,428...57,876,513
G
Bdkrb1
bradykinin receptor B1
involved_in
ISO
(PMID:23846981)
RGD
PMID:23846981
NCBI chr 6:130,275,631...130,284,968
Ensembl chr 6:124,510,870...124,513,747
G
Pgr
progesterone receptor
involved_in
ISO
(PMID:24296318)
RGD
PMID:24296318
NCBI chr 8:14,354,398...14,413,271
Ensembl chr 8:6,072,673...6,131,344
G
Mylk
myosin light chain kinase
involved_in
IBA ISO
GO_REF:0000033 (PMID:20018858)
GO_Central RGD
PMID:20018858
GO_REF:0000033
NCBI chr11:79,288,243...79,535,450
Ensembl chr11:65,783,008...66,030,261
G
Tbx2
T-box transcription factor 2
acts_upstream_of_or_within
ISO
MGI:98495 (PMID:30478225)
RGD
PMID:30478225
NCBI chr10:71,177,082...71,186,275
Ensembl chr10:70,679,518...70,688,529
G
Tbx3
T-box transcription factor 3
acts_upstream_of_or_within
ISO
MGI:98494 (PMID:30478225)
RGD
PMID:30478225
NCBI chr12:42,540,378...42,555,490
Ensembl chr12:36,881,445...36,893,708
G
Tshz3
teashirt zinc finger homeobox 3
involved_in
ISO
(PMID:18776146)
RGD
PMID:18776146
NCBI chr 1:98,525,584...98,597,428
Ensembl chr 1:89,381,858...89,460,874
G
Atp2b4
ATPase plasma membrane Ca2+ transporting 4
involved_in
ISS ISO
GO_REF:0000024 (PMID:16956963)
UniProt RGD
PMID:16956963
GO_REF:0000024
NCBI chr13:47,708,157...47,807,389
Ensembl chr13:45,156,146...45,255,246
G
Bdkrb2
bradykinin receptor B2
involved_in
ISO
(PMID:23846981)
RGD
PMID:23846981
NCBI chr 6:130,237,055...130,267,205
Ensembl chr 6:124,472,566...124,502,497
G
Htr2a
5-hydroxytryptamine receptor 2A
IMP
RGD
PMID:23274492
RGD:7257664
NCBI chr15:56,360,647...56,428,703
Ensembl chr15:49,950,804...50,020,928
G
Htr7
5-hydroxytryptamine receptor 7
IMP
RGD
PMID:20969855
RGD:6480667
NCBI chr 1:243,049,064...243,173,636
Ensembl chr 1:233,636,452...233,760,626
G
P2rx2
purinergic receptor P2X 2
involved_in acts_upstream_of_or_within
IEA ISO
GO_REF:0000107 MGI:1097160|MGI:2687349 (PMID:15961431)
Ensembl RGD
PMID:15961431
GO_REF:0000107
NCBI chr12:51,999,107...52,002,627
Ensembl chr12:46,339,549...46,342,891
G
P2rx3
purinergic receptor P2X 3
involved_in acts_upstream_of_or_within
IEA ISO
GO_REF:0000107 MGI:1934019|MGI:2665170 (PMID:11069181), (PMID:15961431)
Ensembl RGD
PMID:11069181 PMID:15961431
GO_REF:0000107
NCBI chr 3:90,487,506...90,531,315
Ensembl chr 3:70,080,851...70,125,178
G
Pla2g6
phospholipase A2 group VI
IMP
RGD
PMID:12750876
RGD:6482755
NCBI chr 7:112,731,803...112,771,978
Ensembl chr 7:110,851,378...110,891,114
G
Ptger3
prostaglandin E receptor 3
IMP
RGD
PMID:18562635
RGD:10043314
NCBI chr 2:249,264,985...249,409,966
Ensembl chr 2:246,606,183...246,684,434
G
Trpa1
transient receptor potential cation channel, subfamily A, member 1
IMP
RGD
PMID:21367919
RGD:10043365
NCBI chr 5:9,163,060...9,217,325
Ensembl chr 5:4,379,999...4,433,570
G
Trpv1
transient receptor potential cation channel, subfamily V, member 1
acts_upstream_of_or_within
ISO
MGI:1934023 (PMID:12161756)
RGD
PMID:12161756
NCBI chr10:58,349,936...58,375,021
Ensembl chr10:57,851,428...57,876,513
G
Agt
angiotensinogen
IDA
RGD
PMID:21401609
RGD:5129172
NCBI chr19:69,426,540...69,447,017
Ensembl chr19:52,529,185...52,540,977
G
Acta1
actin, alpha 1, skeletal muscle
involved_in
IEA
GO_REF:0000107
Ensembl
GO_REF:0000107
NCBI chr19:68,781,168...68,784,194
Ensembl chr19:51,883,715...51,886,742
G
Acta2
actin alpha 2, smooth muscle
involved_in acts_upstream_of_or_within
IEA ISO
GO_REF:0000107 MGI:3665248 (PMID:11053242)
Ensembl RGD
PMID:11053242
GO_REF:0000107
NCBI chr 1:241,159,723...241,172,503
Ensembl chr 1:231,746,548...231,759,554
G
Actc1
actin, alpha, cardiac muscle 1
involved_in
IEA
GO_REF:0000107
Ensembl
GO_REF:0000107
NCBI chr 3:121,266,291...121,271,827
Ensembl chr 3:100,811,987...100,817,523
G
Actg2
actin gamma 2, smooth muscle
involved_in
IEA
GO_REF:0000107
Ensembl
GO_REF:0000107
NCBI chr 4:117,579,513...117,604,379
Ensembl chr 4:116,021,832...116,046,465
G
Comp
cartilage oligomeric matrix protein
involved_in acts_upstream_of_or_within
IEA ISO
GO_REF:0000107 MGI:2180787 (PMID:27498005)
Ensembl RGD
PMID:27498005
GO_REF:0000107
NCBI chr16:19,081,172...19,089,548
Ensembl chr16:19,047,207...19,055,845
G
Rap1gds1
Rap1 GTPase-GDP dissociation stimulator 1
IMP
RGD
PMID:18348285
RGD:2314690
NCBI chr 2:227,500,366...227,645,213
Ensembl chr 2:227,500,367...227,645,169
G
Slc8a1
solute carrier family 8 member A1
involved_in
ISO
(PMID:10967099)
RGD
PMID:10967099
NCBI chr 6:18,975,498...19,299,704
Ensembl chr 6:13,194,662...13,535,628
G
Edn1
endothelin 1
involved_in
ISO IBA
(PMID:9422810) GO_REF:0000033
RGD GO_Central
PMID:9422810
GO_REF:0000033
NCBI chr17:22,660,799...22,666,687
Ensembl chr17:22,454,420...22,460,885
G
Edn2
endothelin 2
involved_in
ISO IBA IEA
(PMID:8982507), (PMID:9422810) GO_REF:0000033 GO_REF:0000107
RGD GO_Central Ensembl
PMID:8982507 PMID:9422810
GO_REF:0000033 GO_REF:0000107
NCBI chr 5:139,036,576...139,042,074
Ensembl chr 5:133,751,217...133,756,814
G
Edn3
endothelin 3
involved_in
ISO IBA
(PMID:8982507) GO_REF:0000033
RGD GO_Central
PMID:8982507
GO_REF:0000033
NCBI chr 3:183,980,458...184,004,958
Ensembl chr 3:163,562,520...163,585,093
G
Ednrb
endothelin receptor type B
involved_in
ISO
(PMID:8982507)
RGD
PMID:8982507
NCBI chr15:87,055,490...87,086,765
Ensembl chr15:80,643,043...80,672,115
Term paths to the root one shortest all shortest one longest all longest one shortest and longest all