Send us a Message



Submit Data |  Help |  Video Tutorials |  News |  Publications |  Download |  REST API |  Citing RGD |  Contact   

ONTOLOGY REPORT - ANNOTATIONS


Term:smooth muscle contraction
go back to main search page
Accession:GO:0006939 term browser browse the term
Definition:A process in which force is generated within smooth muscle tissue, resulting in a change in muscle geometry. Force generation involves a chemo-mechanical energy conversion step that is carried out by the actin/myosin complex activity, which generates force through ATP hydrolysis. Smooth muscle differs from striated muscle in the much higher actin/myosin ratio, the absence of conspicuous sarcomeres and the ability to contract to a much smaller fraction of its resting length.
Synonyms:exact_synonym: visceral muscle contraction



show annotations for term's descendants           Sort by:
smooth muscle contraction term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ada adenosine deaminase involved_in
acts_upstream_of
IEA
ISO
GO_REF:0000107
MGI:1857117|MGI:2683027 (PMID:18340377)
Ensembl
RGD
PMID:18340377 GO_REF:0000107 NCBI chr 3:172,818,174...172,842,283
Ensembl chr 3:152,398,747...152,447,088
JBrowse link
G Adrb2 adrenoceptor beta 2 involved_in
acts_upstream_of
IEA
ISO
GO_REF:0000107
MGI:88398|MGI:98496 (PMID:12925702)
Ensembl
RGD
PMID:12925702 GO_REF:0000107 NCBI chr18:57,912,760...57,914,802
Ensembl chr18:55,502,903...55,644,512
JBrowse link
G Apbb1 amyloid beta precursor protein binding family B member 1 involved_in ISS
ISO
GO_REF:0000024
(PMID:25757569)
UniProt
RGD
PMID:25757569 GO_REF:0000024 NCBI chr 1:169,308,719...169,332,372
Ensembl chr 1:159,896,880...159,920,627
JBrowse link
G Apbb2 amyloid beta precursor protein binding family B member 2 involved_in ISO (PMID:25757569) RGD PMID:25757569 NCBI chr14:41,557,918...41,878,622
Ensembl chr14:41,557,972...41,877,495
JBrowse link
G Bdkrb2 bradykinin receptor B2 involved_in IEA GO_REF:0000002 InterPro GO_REF:0000002 NCBI chr 6:130,237,055...130,267,205
Ensembl chr 6:124,472,566...124,502,497
JBrowse link
G Cacna1c calcium voltage-gated channel subunit alpha1 C acts_upstream_of_or_within ISO MGI:2389040|MGI:2674119 (PMID:16636102) RGD PMID:16636102 NCBI chr 4:153,431,169...154,051,932
Ensembl chr 4:151,764,138...152,379,648
JBrowse link
G Calca calcitonin-related polypeptide alpha acts_upstream_of ISO (PMID:9322931) RGD PMID:9322931 NCBI chr 1:178,312,636...178,317,588
Ensembl chr 1:168,878,214...168,883,105
JBrowse link
G Chrm3 cholinergic receptor, muscarinic 3 acts_upstream_of
acts_upstream_of_or_within
ISO (PMID:12925702)
MGI:1888740 (PMID:10944224)
RGD PMID:10944224 PMID:12925702 NCBI chr17:64,696,549...65,158,622
Ensembl chr17:60,005,202...60,467,278
JBrowse link
G Chrnb2 cholinergic receptor nicotinic beta 2 subunit acts_upstream_of_or_within ISO MGI:87892 (PMID:10531434) RGD PMID:10531434 NCBI chr 2:177,479,091...177,487,306
Ensembl chr 2:175,181,402...175,189,619
JBrowse link
G Chrnb4 cholinergic receptor nicotinic beta 4 subunit acts_upstream_of_or_within ISO MGI:87891 (PMID:10531434) RGD PMID:10531434 NCBI chr 8:64,312,644...64,333,319
Ensembl chr 8:55,418,313...55,437,027
JBrowse link
G Edn1 endothelin 1 acts_upstream_of ISO (PMID:8010105) RGD PMID:8010105 NCBI chr17:22,660,799...22,666,687
Ensembl chr17:22,454,420...22,460,885
JBrowse link
G Edn2 endothelin 2 acts_upstream_of ISO (PMID:2768235) RGD PMID:2768235 NCBI chr 5:139,036,576...139,042,074
Ensembl chr 5:133,751,217...133,756,814
JBrowse link
G Fkbp1b FKBP prolyl isomerase 1B acts_upstream_of_or_within ISO MGI:2182644 (PMID:14592808) RGD PMID:14592808 NCBI chr 6:33,551,583...33,570,055
Ensembl chr 6:27,838,802...27,848,653
JBrowse link
G Htr7 5-hydroxytryptamine receptor 7 involved_in IEA GO_REF:0000002 InterPro GO_REF:0000002 NCBI chr 1:243,049,064...243,173,636
Ensembl chr 1:233,636,452...233,760,626
JBrowse link
G Myh11 myosin heavy chain 11 acts_upstream_of_or_within ISO MGI:2656492|MGI:3576856 (PMID:10854329), (PMID:11715025), (PMID:12562924) RGD PMID:10854329 PMID:11715025 PMID:12562924 NCBI chr10:1,250,554...1,345,681
Ensembl chr10:743,685...838,459
JBrowse link
G Mylk myosin light chain kinase involved_in ISO (PMID:18586037) RGD PMID:18586037 NCBI chr11:79,288,243...79,535,450
Ensembl chr11:65,783,008...66,030,261
JBrowse link
G Nmur1 neuromedin U receptor 1 involved_in ISO
IEA
(PMID:10899166)
GO_REF:0000107
RGD
Ensembl
PMID:10899166 GO_REF:0000107 NCBI chr 9:94,480,002...94,486,147
Ensembl chr 9:87,033,279...87,036,684
JBrowse link
G Pde4b phosphodiesterase 4B NOT|acts_upstream_of_or_within ISO MGI:2181444 (PMID:14519662) RGD PMID:14519662 NCBI chr 5:122,028,956...122,598,267
Ensembl chr 5:116,799,971...117,367,696
JBrowse link
G Pde4d phosphodiesterase 4D acts_upstream_of_or_within ISO MGI:2451168 (PMID:14519662) RGD PMID:14519662 NCBI chr 2:41,748,337...43,262,567
Ensembl chr 2:40,019,933...41,525,884
JBrowse link
G Rock2 Rho-associated coiled-coil containing protein kinase 2 involved_in IEA GO_REF:0000002 InterPro GO_REF:0000002 NCBI chr 6:45,407,823...45,502,773
Ensembl chr 6:39,679,082...39,774,031
JBrowse link
G Tbxa2r thromboxane A2 receptor acts_upstream_of ISO (PMID:12925702) RGD PMID:12925702 NCBI chr 7:9,034,077...9,041,489
Ensembl chr 7:8,383,378...8,388,176
JBrowse link
G Tpcn2 two pore segment channel 2 involved_in ISO (PMID:20547763) RGD PMID:20547763 NCBI chr 1:209,845,827...209,875,561
Ensembl chr 1:200,416,540...200,446,236
JBrowse link
artery smooth muscle contraction term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Agt angiotensinogen IDA RGD PMID:21076237 RGD:5129195 NCBI chr19:69,426,540...69,447,017
Ensembl chr19:52,529,185...52,540,977
JBrowse link
G Bbs2 Bardet-Biedl syndrome 2 acts_upstream_of_or_within ISO MGI:3521669 (PMID:20852044) RGD PMID:20852044 NCBI chr19:10,915,566...10,950,911
Ensembl chr19:10,909,619...10,944,993
JBrowse link
G Cacna1g calcium voltage-gated channel subunit alpha1 G IMP RGD PMID:18759855 RGD:2308879 NCBI chr10:79,851,886...79,919,926
Ensembl chr10:79,355,008...79,422,752
JBrowse link
G Cd38 CD38 molecule IMP RGD PMID:21431168 RGD:13506923 NCBI chr14:71,384,532...71,424,794
Ensembl chr14:67,172,063...67,211,986
JBrowse link
G Edn1 endothelin 1 involved_in IDA
ISO
(PMID:8982507) RGD PMID:8982507 PMID:7586220 RGD:8662314 NCBI chr17:22,660,799...22,666,687
Ensembl chr17:22,454,420...22,460,885
JBrowse link
G Edn2 endothelin 2 involved_in ISO
IEA
(PMID:8982507)
GO_REF:0000107
RGD
Ensembl
PMID:8982507 GO_REF:0000107 NCBI chr 5:139,036,576...139,042,074
Ensembl chr 5:133,751,217...133,756,814
JBrowse link
G Edn3 endothelin 3 NOT|involved_in ISO (PMID:8982507) RGD PMID:8982507 NCBI chr 3:183,980,458...184,004,958
Ensembl chr 3:163,562,520...163,585,093
JBrowse link
G Ednra endothelin receptor type A involved_in ISO
IEA
(PMID:8982507)
GO_REF:0000107
RGD
Ensembl
PMID:8982507 GO_REF:0000107 NCBI chr19:47,137,360...47,207,961
Ensembl chr19:30,233,571...30,297,049
JBrowse link
G Grip2 glutamate receptor interacting protein 2 acts_upstream_of_or_within ISO MGI:3035933 (PMID:23117660) RGD PMID:23117660 NCBI chr 4:124,271,456...124,356,538
Ensembl chr 4:124,271,456...124,321,268
JBrowse link
G Htr2a 5-hydroxytryptamine receptor 2A IMP RGD PMID:14752059 RGD:7257678 NCBI chr15:56,360,647...56,428,703
Ensembl chr15:49,950,804...50,020,928
JBrowse link
G Mkks MKKS centrosomal shuttling protein acts_upstream_of_or_within ISO MGI:3526444 (PMID:20852044) RGD PMID:20852044 NCBI chr 3:144,654,563...144,672,831
Ensembl chr 3:124,201,877...124,220,162
JBrowse link
G Scnn1b sodium channel epithelial 1 subunit beta involved_in
acts_upstream_of_or_within
IEA
ISO
GO_REF:0000107
MGI:2179831 (PMID:19553501)
Ensembl
RGD
PMID:19553501 GO_REF:0000107 NCBI chr 1:185,861,326...185,915,717
Ensembl chr 1:176,430,103...176,484,451
JBrowse link
G Smpd3 sphingomyelin phosphodiesterase 3 IMP RGD PMID:19088082 RGD:10042965 NCBI chr19:51,072,209...51,155,639
Ensembl chr19:34,162,341...34,245,749
JBrowse link
esophagus smooth muscle contraction term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Sulf1 sulfatase 1 involved_in IEA
ISO
ISS
GO_REF:0000104
UniProtKB:Q8CFG0 (PMID:17720696)
GO_REF:0000024
UniProt
RGD
PMID:17720696 GO_REF:0000024 GO_REF:0000104 NCBI chr 5:11,145,950...11,308,622
Ensembl chr 5:6,362,911...6,525,584
JBrowse link
G Sulf2 sulfatase 2 involved_in ISO UniProtKB:Q8K007 (PMID:17720696) RGD PMID:17720696 NCBI chr 3:175,241,322...175,323,808
Ensembl chr 3:154,822,085...154,904,415
JBrowse link
intestine smooth muscle contraction term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Htr1d 5-hydroxytryptamine receptor 1D involved_in ISO (PMID:9186750) RGD PMID:9186750 NCBI chr 5:148,656,252...148,676,532
Ensembl chr 5:148,674,495...148,675,619
JBrowse link
G Htr2b 5-hydroxytryptamine receptor 2B involved_in ISS
ISO
IEA
GO_REF:0000024
(PMID:7599919), (PMID:9186750)
GO_REF:0000107
UniProt
RGD
Ensembl
PMID:7599919 PMID:9186750 GO_REF:0000024 GO_REF:0000107 NCBI chr 9:94,184,442...94,206,851
Ensembl chr 9:86,742,102...86,755,108
JBrowse link
G Ptger3 prostaglandin E receptor 3 involved_in IMP
IBA
GO_REF:0000033 GO_Central
RGD
PMID:24170253 GO_REF:0000033, RGD:10043193 NCBI chr 2:249,264,985...249,409,966
Ensembl chr 2:246,606,183...246,684,434
JBrowse link
G Tacr2 tachykinin receptor 2 IMP RGD PMID:11275010 RGD:5147481 NCBI chr20:30,751,645...30,766,181
Ensembl chr20:30,208,907...30,223,446
JBrowse link
negative regulation of small intestine smooth muscle contraction term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Kcnma1 potassium calcium-activated channel subfamily M alpha 1 IMP RGD PMID:23647678 RGD:10412032 NCBI chr15:351,065...1,057,117
Ensembl chr15:302,214...1,001,198
JBrowse link
G Ptger3 prostaglandin E receptor 3 IDA RGD PMID:11991626 RGD:10003093 NCBI chr 2:249,264,985...249,409,966
Ensembl chr 2:246,606,183...246,684,434
JBrowse link
G Ptger4 prostaglandin E receptor 4 IDA RGD PMID:11991626 RGD:10003093 NCBI chr 2:56,061,699...56,074,594
Ensembl chr 2:54,335,424...54,346,670
JBrowse link
negative regulation of smooth muscle contraction term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Adrb1 adrenoceptor beta 1 IMP RGD PMID:18306009 RGD:5129131 NCBI chr 1:265,777,103...265,780,114
Ensembl chr 1:255,771,597...255,807,259
JBrowse link
G Adrb2 adrenoceptor beta 2 involved_in
acts_upstream_of_or_within
IEA
ISO
GO_REF:0000107
MGI:88398|MGI:98496 (PMID:12925702)
Ensembl
RGD
PMID:12925702 GO_REF:0000107 NCBI chr18:57,912,760...57,914,802
Ensembl chr18:55,502,903...55,644,512
JBrowse link
G Calca calcitonin-related polypeptide alpha acts_upstream_of_or_within IMP
ISO
(PMID:9322931) RGD PMID:9322931 PMID:11230364 RGD:68890 NCBI chr 1:178,312,636...178,317,588
Ensembl chr 1:168,878,214...168,883,105
JBrowse link
G Calcrl calcitonin receptor like receptor IMP RGD PMID:17363466 RGD:1625357 NCBI chr 3:89,835,071...89,932,616
Ensembl chr 3:69,430,120...69,525,910
JBrowse link
G Irag1 inositol 1,4,5-triphosphate receptor associated 1 acts_upstream_of_or_within ISO MGI:3525059 (PMID:15483626) RGD PMID:15483626 NCBI chr 1:164,981,716...165,094,232
Ensembl chr 1:164,981,716...165,094,176
JBrowse link
G Prkg1 protein kinase cGMP-dependent 1 acts_upstream_of_or_within ISO MGI:2181586 (PMID:15483626) RGD PMID:15483626 NCBI chr 1:237,818,950...239,052,184
Ensembl chr 1:228,408,947...229,639,080
JBrowse link
G Ptgs2 prostaglandin-endoperoxide synthase 2 IMP RGD PMID:21051526 RGD:5135055 NCBI chr13:64,714,063...64,722,320
Ensembl chr13:62,163,932...62,172,188
JBrowse link
negative regulation of uterine smooth muscle contraction term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Adra2a adrenoceptor alpha 2A IMP RGD PMID:17664026 RGD:6893570 NCBI chr 1:263,066,780...263,069,580
Ensembl chr 1:253,060,218...253,064,365
JBrowse link
G Adra2c adrenoceptor alpha 2C IMP RGD PMID:17664026 RGD:6893570 NCBI chr14:79,695,514...79,697,476
Ensembl chr14:75,471,143...75,472,846
JBrowse link
negative regulation of vascular associated smooth muscle contraction term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Arhgap42 Rho GTPase activating protein 42 acts_upstream_of_or_within ISO MGI:3871380 (PMID:24335996) RGD PMID:24335996 NCBI chr 8:6,154,759...6,384,497
Ensembl chr 8:6,156,865...6,384,870
JBrowse link
G Dock4 dedicator of cytokinesis 4 involved_in ISO (PMID:22158624) RGD PMID:22158624 NCBI chr 6:63,240,050...63,629,772
Ensembl chr 6:57,512,908...57,901,855
JBrowse link
G Dock5 dedicator of cytokinesis 5 involved_in ISO (PMID:22158624) RGD PMID:22158624 NCBI chr15:41,979,728...42,158,733
Ensembl chr15:41,979,729...42,158,649
JBrowse link
G Stub1 STIP1 homology and U-box containing protein 1 involved_in IMP PMID:19237536 UniProt PMID:19237536 RGD:401901238 NCBI chr10:15,355,278...15,357,559
Ensembl chr10:14,850,765...14,853,046
JBrowse link
peristalsis term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Agt angiotensinogen acts_upstream_of_or_within ISO MGI:2183545 (PMID:9788961) RGD PMID:9788961 NCBI chr19:69,426,540...69,447,017
Ensembl chr19:52,529,185...52,540,977
JBrowse link
G Dlg1 discs large MAGUK scaffold protein 1 involved_in
acts_upstream_of_or_within
IEA
ISO
GO_REF:0000107
MGI:3699270 (PMID:17172448)
Ensembl
RGD
PMID:17172448 GO_REF:0000107 NCBI chr11:82,416,853...82,607,797
Ensembl chr11:68,911,883...69,102,689
JBrowse link
G Drd1 dopamine receptor D1 involved_in
acts_upstream_of_or_within
IEA
ISO
GO_REF:0000107
MGI:94924 (PMID:15272078)
Ensembl
RGD
PMID:15272078 GO_REF:0000107 NCBI chr17:10,545,488...10,550,029
Ensembl chr17:10,540,558...10,545,002
JBrowse link
G Drd2 dopamine receptor D2 acts_upstream_of_or_within ISO MGI:2388386|MGI:99578 (PMID:15272078), (PMID:16525059) RGD PMID:15272078 PMID:16525059 NCBI chr 8:58,605,403...58,669,339
Ensembl chr 8:49,708,927...49,772,875
JBrowse link
G Gdnf glial cell derived neurotrophic factor involved_in
acts_upstream_of_or_within
ISS
ISO
IEA
GO_REF:0000024
(PMID:8657307)
MGI:2136846 (PMID:11774071)
GO_REF:0000107
UniProt
RGD
Ensembl
PMID:8657307 PMID:11774071 GO_REF:0000024 GO_REF:0000107 NCBI chr 2:58,621,327...58,647,242
Ensembl chr 2:56,895,010...56,917,209
JBrowse link
G Neurog1 neurogenin 1 involved_in ISO UniProtKB:Q6ZNK6|UniProtKB:Q8TF63 (PMID:23419067) RGD PMID:23419067 NCBI chr17:8,368,096...8,369,615
Ensembl chr17:8,362,821...8,364,571
JBrowse link
G Npy1r neuropeptide Y receptor Y1 IMP RGD PMID:12919938 RGD:1642317 NCBI chr16:23,037,788...23,047,330
Ensembl chr16:23,037,789...23,046,759
JBrowse link
G P2rx2 purinergic receptor P2X 2 involved_in
acts_upstream_of_or_within
IEA
ISO
GO_REF:0000107
MGI:2687349 (PMID:12937291)
Ensembl
RGD
PMID:12937291 GO_REF:0000107 NCBI chr12:51,999,107...52,002,627
Ensembl chr12:46,339,549...46,342,891
JBrowse link
G P2rx3 purinergic receptor P2X 3 involved_in
acts_upstream_of_or_within
IEA
ISO
GO_REF:0000107
MGI:1934019 (PMID:12813150)
Ensembl
RGD
PMID:12813150 GO_REF:0000107 NCBI chr 3:90,487,506...90,531,315
Ensembl chr 3:70,080,851...70,125,178
JBrowse link
G Sstr2 somatostatin receptor 2 IMP RGD PMID:12504886 RGD:727490 NCBI chr10:99,163,353...99,170,519
Ensembl chr10:98,664,216...98,674,351
JBrowse link
G Tifab TIFA inhibitor involved_in ISO UniProtKB:Q8TF63|UniProtKB:Q92886 (PMID:23419067) RGD PMID:23419067 NCBI chr17:8,438,622...8,441,750
Ensembl chr17:8,431,635...8,436,592
JBrowse link
positive regulation of colon smooth muscle contraction term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Kit KIT proto-oncogene receptor tyrosine kinase IMP RGD PMID:17322067 RGD:12910822 NCBI chr14:32,901,615...32,978,895
Ensembl chr14:32,548,877...32,624,652
JBrowse link
G Ptger3 prostaglandin E receptor 3 IMP RGD PMID:24170253 RGD:10043193 NCBI chr 2:249,264,985...249,409,966
Ensembl chr 2:246,606,183...246,684,434
JBrowse link
positive regulation of gastro-intestinal system smooth muscle contraction term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ghrl ghrelin and obestatin prepropeptide IDA RGD PMID:15890336 RGD:12907565 NCBI chr 4:148,421,315...148,431,128
Ensembl chr 4:146,865,712...146,869,621
JBrowse link
G Ptafr platelet-activating factor receptor IMP RGD PMID:10821044 RGD:10043148 NCBI chr 5:150,049,322...150,079,060
Ensembl chr 5:144,765,976...144,795,251
JBrowse link
G Spx spexin hormone involved_in ISO
IBA
ISS
(PMID:17284679)
GO_REF:0000033
RGD
GO_Central
PMID:17284679 PMID:17284679 GO_REF:0000033, RGD:12907558 NCBI chr 4:177,087,053...177,093,091
Ensembl chr 4:175,356,247...175,362,082
JBrowse link
positive regulation of hindgut contraction term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Oxt oxytocin/neurophysin I prepropeptide IDA RGD PMID:19258489 RGD:2304084 NCBI chr 3:138,235,754...138,236,594
Ensembl chr 3:117,782,650...117,783,490
JBrowse link
G Pawr pro-apoptotic WT1 regulator IDA RGD PMID:14724155 RGD:9835340 NCBI chr 7:45,531,480...45,611,492
Ensembl chr 7:43,645,084...43,725,028
JBrowse link
positive regulation of pyloric antrum smooth muscle contraction term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Kit KIT proto-oncogene receptor tyrosine kinase IMP RGD PMID:9832052 RGD:12910753 NCBI chr14:32,901,615...32,978,895
Ensembl chr14:32,548,877...32,624,652
JBrowse link
positive regulation of small intestine smooth muscle contraction term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ghrl ghrelin and obestatin prepropeptide IDA RGD PMID:15890336 PMID:21874246 RGD:12907565, RGD:12910732 NCBI chr 4:148,421,315...148,431,128
Ensembl chr 4:146,865,712...146,869,621
JBrowse link
G Ghsr growth hormone secretagogue receptor IMP RGD PMID:21874246 PMID:15890336 RGD:12910732, RGD:12907565 NCBI chr 2:112,196,158...112,201,666
Ensembl chr 2:110,268,489...110,271,865
JBrowse link
G Kit KIT proto-oncogene receptor tyrosine kinase IMP RGD PMID:7542218 RGD:12910748 NCBI chr14:32,901,615...32,978,895
Ensembl chr14:32,548,877...32,624,652
JBrowse link
positive regulation of smooth muscle contraction term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ada adenosine deaminase involved_in
acts_upstream_of_or_within
IEA
ISO
GO_REF:0000107
MGI:1857117|MGI:2683027 (PMID:18340377)
Ensembl
RGD
PMID:18340377 GO_REF:0000107 NCBI chr 3:172,818,174...172,842,283
Ensembl chr 3:152,398,747...152,447,088
JBrowse link
G Adra1a adrenoceptor alpha 1A involved_in IMP
ISO
IEA
(PMID:21335239)
GO_REF:0000107
RGD
Ensembl
PMID:21335239 PMID:19041301 GO_REF:0000107, RGD:5688345 NCBI chr15:45,005,648...45,111,416
Ensembl chr15:40,832,534...40,927,500
JBrowse link
G Chrm3 cholinergic receptor, muscarinic 3 acts_upstream_of_or_within ISO (PMID:12925702) RGD PMID:12925702 NCBI chr17:64,696,549...65,158,622
Ensembl chr17:60,005,202...60,467,278
JBrowse link
G Cttn cortactin involved_in ISO
IEA
UniProtKB:P07737 (PMID:24700464)
GO_REF:0000107
RGD
Ensembl
PMID:24700464 GO_REF:0000107 NCBI chr 1:209,029,048...209,064,577
Ensembl chr 1:199,599,710...199,635,164
JBrowse link
G Edn1 endothelin 1 involved_in
acts_upstream_of_or_within
IDA
IBA
ISO
IMP
GO_REF:0000033
(PMID:8010105)
GO_Central
RGD
PMID:8010105 PMID:12396026 PMID:8893723 GO_REF:0000033, RGD:1581797, RGD:8662282 NCBI chr17:22,660,799...22,666,687
Ensembl chr17:22,454,420...22,460,885
JBrowse link
G Edn2 endothelin 2 involved_in
acts_upstream_of_or_within
IDA
IBA
ISO
IEA
GO_REF:0000033
(PMID:2768235)
GO_REF:0000107
GO_Central
RGD
Ensembl
PMID:2768235 PMID:12396026 GO_REF:0000033 GO_REF:0000107, RGD:1581797 NCBI chr 5:139,036,576...139,042,074
Ensembl chr 5:133,751,217...133,756,814
JBrowse link
G Edn3 endothelin 3 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr 3:183,980,458...184,004,958
Ensembl chr 3:163,562,520...163,585,093
JBrowse link
G F2r coagulation factor II (thrombin) receptor IDA RGD PMID:14699501 RGD:1582292 NCBI chr 2:28,604,066...28,620,579
Ensembl chr 2:26,868,404...26,885,870
JBrowse link
G Itga2 integrin subunit alpha 2 IMP SMC-containing collagen lattice contraction RGD PMID:16263112 RGD:2307398 NCBI chr 2:48,253,412...48,354,509
Ensembl chr 2:46,523,948...46,621,481
JBrowse link
G Myocd myocardin involved_in ISO
IEA
(PMID:17215356)
GO_REF:0000107
RGD
Ensembl
PMID:17215356 GO_REF:0000107 NCBI chr10:50,332,356...50,426,819
Ensembl chr10:49,836,641...49,927,627
JBrowse link
G Nmu neuromedin U involved_in IMP
IBA
IDA
GO_REF:0000033
PMID:3178840
GO_Central
RGD
PMID:16474416 PMID:3178840 GO_REF:0000033, RGD:1642122, RGD:13461757 NCBI chr14:32,198,789...32,226,397
Ensembl chr14:31,844,728...31,872,192
JBrowse link
G Npnt nephronectin involved_in ISO (PMID:21335239) RGD PMID:21335239 NCBI chr 2:224,065,191...224,133,567
Ensembl chr 2:221,391,153...221,459,401
JBrowse link
G Npy2r neuropeptide Y receptor Y2 IMP neuropeptide Y- and peptide YY-induced contraction in ascending and descending colon RGD PMID:10422644 RGD:1642606 NCBI chr 2:167,901,999...167,912,165
Ensembl chr 2:167,903,879...167,905,024
JBrowse link
G Prok2 prokineticin 2 involved_in ISO (PMID:11259612) RGD PMID:11259612 NCBI chr 4:133,903,210...133,918,126
Ensembl chr 4:132,347,103...132,361,385
JBrowse link
G Ptafr platelet-activating factor receptor IMP RGD PMID:10821044 RGD:10043148 NCBI chr 5:150,049,322...150,079,060
Ensembl chr 5:144,765,976...144,795,251
JBrowse link
G Ptgs1 prostaglandin-endoperoxide synthase 1 IMP RGD PMID:18480553 RGD:2300247 NCBI chr 3:39,981,419...40,002,993
Ensembl chr 3:19,584,015...19,605,586
JBrowse link
G Ptgs2 prostaglandin-endoperoxide synthase 2 IMP RGD PMID:18480553 RGD:2300247 NCBI chr13:64,714,063...64,722,320
Ensembl chr13:62,163,932...62,172,188
JBrowse link
G Rhoa ras homolog family member A IMP RGD PMID:17379756 RGD:1642962 NCBI chr 8:117,870,548...117,904,303
Ensembl chr 8:108,991,954...109,025,746
JBrowse link
G Sphk1 sphingosine kinase 1 involved_in ISO
IEA
(PMID:12847068)
GO_REF:0000107
RGD
Ensembl
PMID:12847068 GO_REF:0000107 NCBI chr10:102,257,413...102,263,086
Ensembl chr10:101,758,711...101,764,240
JBrowse link
G Srf serum response factor involved_in ISO (PMID:17215356) RGD PMID:17215356 NCBI chr 9:21,924,050...21,933,338
Ensembl chr 9:14,426,472...14,435,733
JBrowse link
G Tbxa2r thromboxane A2 receptor acts_upstream_of_or_within ISO (PMID:12925702) RGD PMID:12925702 NCBI chr 7:9,034,077...9,041,489
Ensembl chr 7:8,383,378...8,388,176
JBrowse link
positive regulation of smooth muscle contraction involved in micturition term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ptger3 prostaglandin E receptor 3 IMP RGD PMID:18562635 RGD:10043314 NCBI chr 2:249,264,985...249,409,966
Ensembl chr 2:246,606,183...246,684,434
JBrowse link
positive regulation of stomach fundus smooth muscle contraction term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Nmu neuromedin U involved_in IDA PMID:2055247 UniProt PMID:2055247 RGD:13461751 NCBI chr14:32,198,789...32,226,397
Ensembl chr14:31,844,728...31,872,192
JBrowse link
positive regulation of uterine smooth muscle contraction term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Abat 4-aminobutyrate aminotransferase IMP RGD PMID:12742000 RGD:10047059 NCBI chr10:7,503,351...7,599,474
Ensembl chr10:6,999,819...7,092,835
JBrowse link
G Adra2b adrenoceptor alpha 2B IMP RGD PMID:19634638 PMID:17664026 RGD:2313546, RGD:6893570 NCBI chr 3:135,038,481...135,042,527
Ensembl chr 3:114,585,169...114,589,355
JBrowse link
G Gper1 G protein-coupled estrogen receptor 1 involved_in ISO
IEA
ISS
(PMID:21427217)
GO_REF:0000107
GO_REF:0000024
RGD
Ensembl
UniProt
PMID:21427217 GO_REF:0000024 GO_REF:0000107 NCBI chr12:20,331,073...20,336,527
Ensembl chr12:15,217,442...15,221,889
JBrowse link
G Lck LCK proto-oncogene, Src family tyrosine kinase IMP RGD PMID:19208792 RGD:2316554 NCBI chr 5:147,172,642...147,201,267
Ensembl chr 5:141,888,326...141,903,794
JBrowse link
G Oxt oxytocin/neurophysin I prepropeptide IDA RGD PMID:19164477 RGD:2303954 NCBI chr 3:138,235,754...138,236,594
Ensembl chr 3:117,782,650...117,783,490
JBrowse link
G Oxtr oxytocin receptor IMP RGD PMID:19164477 RGD:2303954 NCBI chr 4:147,154,374...147,171,723
Ensembl chr 4:145,599,561...145,614,674
JBrowse link
G Tacr1 tachykinin receptor 1 IDA RGD PMID:12390879 RGD:2305937 NCBI chr 4:116,478,617...116,647,492
Ensembl chr 4:114,920,844...115,089,733
JBrowse link
G Tacr2 tachykinin receptor 2 IDA RGD PMID:12390879 RGD:2305937 NCBI chr20:30,751,645...30,766,181
Ensembl chr20:30,208,907...30,223,446
JBrowse link
G Tacr3 tachykinin receptor 3 IDA RGD PMID:12390879 RGD:2305937 NCBI chr 2:225,940,497...226,037,756
Ensembl chr 2:223,266,536...223,363,791
JBrowse link
positive regulation of vascular associated smooth muscle contraction term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Chrm3 cholinergic receptor, muscarinic 3 IMP RGD PMID:8428203 RGD:2303387 NCBI chr17:64,696,549...65,158,622
Ensembl chr17:60,005,202...60,467,278
JBrowse link
G Mir21 microRNA 21 involved_in ISO (PMID:22158624) RGD PMID:22158624 NCBI chr10:71,902,600...71,902,691
Ensembl chr10:71,405,257...71,405,348
JBrowse link
G Rhoa ras homolog family member A acts_upstream_of_or_within ISO (PMID:24335996) RGD PMID:24335996 NCBI chr 8:117,870,548...117,904,303
Ensembl chr 8:108,991,954...109,025,746
JBrowse link
regulation of hindgut contraction term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ghsr growth hormone secretagogue receptor IMP RGD PMID:16873401 RGD:1625276 NCBI chr 2:112,196,158...112,201,666
Ensembl chr 2:110,268,489...110,271,865
JBrowse link
regulation of smooth muscle contraction term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Adrb2 adrenoceptor beta 2 involved_in IEA GO_REF:0000002 InterPro GO_REF:0000002 NCBI chr18:57,912,760...57,914,802
Ensembl chr18:55,502,903...55,644,512
JBrowse link
G Atp1a2 ATPase Na+/K+ transporting subunit alpha 2 acts_upstream_of_or_within ISO MGI:2451291 (PMID:14627611) RGD PMID:14627611 NCBI chr13:87,261,964...87,286,911
Ensembl chr13:84,729,601...84,754,544
JBrowse link
G Cav1 caveolin 1 involved_in
acts_upstream_of_or_within
IEA
ISO
GO_REF:0000107
MGI:2180364 (PMID:16782699), (PMID:17098833)
Ensembl
RGD
PMID:16782699 PMID:17098833 GO_REF:0000107 NCBI chr 4:46,606,538...46,639,616
Ensembl chr 4:45,634,918...45,673,705
JBrowse link
G Chrm2 cholinergic receptor, muscarinic 2 involved_in IDA
IBA
GO_REF:0000033 GO_Central
RGD
PMID:12185001 GO_REF:0000033, RGD:724728 NCBI chr 4:65,981,136...66,116,128
Ensembl chr 4:65,014,144...65,149,103
JBrowse link
G Chrm3 cholinergic receptor, muscarinic 3 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr17:64,696,549...65,158,622
Ensembl chr17:60,005,202...60,467,278
JBrowse link
G Chrna3 cholinergic receptor nicotinic alpha 3 subunit acts_upstream_of_or_within ISO MGI:2155602 (PMID:10318955), (PMID:10771006) RGD PMID:10318955 PMID:10771006 NCBI chr 8:64,297,755...64,311,251
Ensembl chr 8:55,401,702...55,415,165
JBrowse link
G Chrnb4 cholinergic receptor nicotinic beta 4 subunit acts_upstream_of_or_within ISO MGI:2158716 (PMID:10771006) RGD PMID:10771006 NCBI chr 8:64,312,644...64,333,319
Ensembl chr 8:55,418,313...55,437,027
JBrowse link
G Flt1 Fms related receptor tyrosine kinase 1 IDA RGD PMID:12062723 RGD:1582498 NCBI chr12:12,333,050...12,504,750
Ensembl chr12:7,297,292...7,468,626
JBrowse link
G Nmu neuromedin U involved_in IEA GO_REF:0000002 InterPro GO_REF:0000002 NCBI chr14:32,198,789...32,226,397
Ensembl chr14:31,844,728...31,872,192
JBrowse link
G Ormdl3 ORMDL sphingolipid biosynthesis regulator 3 involved_in
acts_upstream_of
IEA
ISO
GO_REF:0000107
(PMID:28275141)
Ensembl
RGD
PMID:28275141 GO_REF:0000107 NCBI chr10:84,086,317...84,092,673
Ensembl chr10:83,590,071...83,598,620
JBrowse link
G P2rx1 purinergic receptor P2X 1 acts_upstream_of_or_within ISO MGI:2181608 (PMID:10638758), (PMID:11570704) RGD PMID:10638758 PMID:11570704 NCBI chr10:58,117,107...58,132,167
Ensembl chr10:57,618,586...57,633,623
JBrowse link
G Shc1 SHC adaptor protein 1 IMP RGD PMID:27270176 RGD:12792230 NCBI chr 2:177,135,649...177,147,257
Ensembl chr 2:174,837,930...174,849,536
JBrowse link
G Tnni3 troponin I3, cardiac type IMP RGD PMID:16236710 RGD:1580418 NCBI chr 1:78,342,571...78,346,255
Ensembl chr 1:69,299,900...69,303,580
JBrowse link
regulation of uterine smooth muscle contraction term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Setd3 SET domain containing 3, actin N3(tau)-histidine methyltransferase involved_in ISS
IBA
ISO
GO_REF:0000024
GO_REF:0000033
(PMID:30626964)
UniProt
GO_Central
RGD
PMID:30626964 GO_REF:0000024 GO_REF:0000033 NCBI chr 6:132,787,478...132,854,421
Ensembl chr 6:127,023,058...127,090,008
JBrowse link
G Tacr1 tachykinin receptor 1 involved_in ISO (PMID:15647454) RGD PMID:15647454 NCBI chr 4:116,478,617...116,647,492
Ensembl chr 4:114,920,844...115,089,733
JBrowse link
G Tacr2 tachykinin receptor 2 involved_in ISO (PMID:15647454) RGD PMID:15647454 NCBI chr20:30,751,645...30,766,181
Ensembl chr20:30,208,907...30,223,446
JBrowse link
regulation of vascular associated smooth muscle contraction term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Adra2b adrenoceptor alpha 2B IMP RGD PMID:18054907 RGD:2313547 NCBI chr 3:135,038,481...135,042,527
Ensembl chr 3:114,585,169...114,589,355
JBrowse link
G Atp2b1 ATPase plasma membrane Ca2+ transporting 1 involved_in ISS
ISO
IEA
GO_REF:0000024
(PMID:24805951)
GO_REF:0000107
UniProt
RGD
Ensembl
PMID:24805951 GO_REF:0000024 GO_REF:0000107 NCBI chr 7:35,622,267...35,731,904
Ensembl chr 7:33,735,871...33,843,295
JBrowse link
G Map2k1 mitogen activated protein kinase kinase 1 IMP inhibition decreases both calcium-stimulated and unstimulated myogenic tone in middle cerebral arteries (p<0.001) RGD PMID:10198244 RGD:2293329 NCBI chr 8:73,578,747...73,650,184
Ensembl chr 8:64,683,449...64,755,147
JBrowse link
G P2rx1 purinergic receptor P2X 1 acts_upstream_of_or_within ISO MGI:2181608 (PMID:16920810) RGD PMID:16920810 NCBI chr10:58,117,107...58,132,167
Ensembl chr10:57,618,586...57,633,623
JBrowse link
G Zdhhc21 zinc finger DHHC-type palmitoyltransferase 21 involved_in ISO (PMID:26715683) RGD PMID:26715683 NCBI chr 5:97,227,621...97,286,866
Ensembl chr 5:97,229,345...97,286,537
JBrowse link
regulation of vein smooth muscle contraction term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Adrb2 adrenoceptor beta 2 enables IDA salbutamol, isoproterenol, clenbuterol, norepinephrine RGD PMID:6289140 RGD:2301944 NCBI chr18:57,912,760...57,914,802
Ensembl chr18:55,502,903...55,644,512
JBrowse link
G Htr7 5-hydroxytryptamine receptor 7 IMP RGD PMID:31125290 RGD:14696717 NCBI chr 1:243,049,064...243,173,636
Ensembl chr 1:233,636,452...233,760,626
JBrowse link
relaxation of vascular associated smooth muscle term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Adora2b adenosine A2B receptor acts_upstream_of_or_within
involved_in
ISO
IEA
MGI:3773754 (PMID:18340377)
GO_REF:0000107
RGD
Ensembl
PMID:18340377 GO_REF:0000107 NCBI chr10:47,439,712...47,456,092
Ensembl chr10:46,940,384...46,956,772
JBrowse link
G Gucy1a1 guanylate cyclase 1 soluble subunit alpha 1 acts_upstream_of_or_within
involved_in
ISO
IEA
MGI:3640802 (PMID:16614755)
GO_REF:0000107
RGD
Ensembl
PMID:16614755 GO_REF:0000107 NCBI chr 2:169,716,684...169,780,360
Ensembl chr 2:167,418,640...167,481,671
JBrowse link
G Irag1 inositol 1,4,5-triphosphate receptor associated 1 acts_upstream_of_or_within ISO MGI:3525059 (PMID:15483626) RGD PMID:15483626 NCBI chr 1:164,981,716...165,094,232
Ensembl chr 1:164,981,716...165,094,176
JBrowse link
G Kcnma1 potassium calcium-activated channel subfamily M alpha 1 involved_in
acts_upstream_of_or_within
ISO (PMID:25139746)
MGI:3050114 (PMID:15867178)
RGD PMID:15867178 PMID:25139746 NCBI chr15:351,065...1,057,117
Ensembl chr15:302,214...1,001,198
JBrowse link
G Prkg1 protein kinase cGMP-dependent 1 acts_upstream_of_or_within ISO MGI:2181586 (PMID:15483626) RGD PMID:15483626 NCBI chr 1:237,818,950...239,052,184
Ensembl chr 1:228,408,947...229,639,080
JBrowse link
G Rgs2 regulator of G-protein signaling 2 involved_in ISO (PMID:14608379) RGD PMID:14608379 NCBI chr13:58,350,063...58,352,666
Ensembl chr13:55,798,829...55,802,385
JBrowse link
G Sod1 superoxide dismutase 1 involved_in
acts_upstream_of_or_within
ISS
ISO
GO_REF:0000024
MGI:1857873 (PMID:12433839), (PMID:14679182)
UniProt
RGD
PMID:12433839 PMID:14679182 GO_REF:0000024 NCBI chr11:42,942,742...42,948,399
Ensembl chr11:29,456,558...29,462,249
JBrowse link
G Trpc1 transient receptor potential cation channel, subfamily C, member 1 involved_in ISO (PMID:25139746) RGD PMID:25139746 NCBI chr 8:105,142,931...105,193,842
Ensembl chr 8:96,263,329...96,314,276
JBrowse link
G Trpv4 transient receptor potential cation channel, subfamily V, member 4 involved_in ISO (PMID:25139746) RGD PMID:25139746 NCBI chr12:47,599,161...47,638,143
Ensembl chr12:41,938,560...41,977,517
JBrowse link
small intestine smooth muscle contraction term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Scn11a sodium voltage-gated channel alpha subunit 11 involved_in IEA
ISO
GO_REF:0000107
MGI:5558025 (PMID:32817686)
Ensembl
RGD
PMID:32817686 GO_REF:0000107 NCBI chr 8:128,374,441...128,444,718
Ensembl chr 8:119,496,769...119,567,044
JBrowse link
smooth muscle contraction involved in micturition term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Cacna1c calcium voltage-gated channel subunit alpha1 C acts_upstream_of_or_within ISO MGI:2674119 (PMID:15132976) RGD PMID:15132976 NCBI chr 4:153,431,169...154,051,932
Ensembl chr 4:151,764,138...152,379,648
JBrowse link
G Kcnma1 potassium calcium-activated channel subfamily M alpha 1 involved_in
acts_upstream_of_or_within
ISO
IEA
(PMID:11641143)
MGI:3053849 (PMID:15827347)
GO_REF:0000107
RGD
Ensembl
PMID:11641143 PMID:15827347 GO_REF:0000107 NCBI chr15:351,065...1,057,117
Ensembl chr15:302,214...1,001,198
JBrowse link
G Tacr1 tachykinin receptor 1 IMP RGD PMID:18945947 RGD:2304258 NCBI chr 4:116,478,617...116,647,492
Ensembl chr 4:114,920,844...115,089,733
JBrowse link
G Trpv1 transient receptor potential cation channel, subfamily V, member 1 acts_upstream_of_or_within ISO MGI:1934023 (PMID:12161756) RGD PMID:12161756 NCBI chr10:58,349,936...58,375,021
Ensembl chr10:57,851,428...57,876,513
JBrowse link
smooth muscle relaxation of the bladder outlet term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Bdkrb1 bradykinin receptor B1 involved_in ISO (PMID:23846981) RGD PMID:23846981 NCBI chr 6:130,275,631...130,284,968
Ensembl chr 6:124,510,870...124,513,747
JBrowse link
G Pgr progesterone receptor involved_in ISO (PMID:24296318) RGD PMID:24296318 NCBI chr 8:14,354,398...14,413,271
Ensembl chr 8:6,072,673...6,131,344
JBrowse link
tonic smooth muscle contraction term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Mylk myosin light chain kinase involved_in IBA
ISO
GO_REF:0000033
(PMID:20018858)
GO_Central
RGD
PMID:20018858 GO_REF:0000033 NCBI chr11:79,288,243...79,535,450
Ensembl chr11:65,783,008...66,030,261
JBrowse link
ureteric peristalsis term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Tbx2 T-box transcription factor 2 acts_upstream_of_or_within ISO MGI:98495 (PMID:30478225) RGD PMID:30478225 NCBI chr10:71,177,082...71,186,275
Ensembl chr10:70,679,518...70,688,529
JBrowse link
G Tbx3 T-box transcription factor 3 acts_upstream_of_or_within ISO MGI:98494 (PMID:30478225) RGD PMID:30478225 NCBI chr12:42,540,378...42,555,490
Ensembl chr12:36,881,445...36,893,708
JBrowse link
G Tshz3 teashirt zinc finger homeobox 3 involved_in ISO (PMID:18776146) RGD PMID:18776146 NCBI chr 1:98,525,584...98,597,428
Ensembl chr 1:89,381,858...89,460,874
JBrowse link
urinary bladder smooth muscle contraction term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Atp2b4 ATPase plasma membrane Ca2+ transporting 4 involved_in ISS
ISO
GO_REF:0000024
(PMID:16956963)
UniProt
RGD
PMID:16956963 GO_REF:0000024 NCBI chr13:47,708,157...47,807,389
Ensembl chr13:45,156,146...45,255,246
JBrowse link
G Bdkrb2 bradykinin receptor B2 involved_in ISO (PMID:23846981) RGD PMID:23846981 NCBI chr 6:130,237,055...130,267,205
Ensembl chr 6:124,472,566...124,502,497
JBrowse link
G Htr2a 5-hydroxytryptamine receptor 2A IMP RGD PMID:23274492 RGD:7257664 NCBI chr15:56,360,647...56,428,703
Ensembl chr15:49,950,804...50,020,928
JBrowse link
G Htr7 5-hydroxytryptamine receptor 7 IMP RGD PMID:20969855 RGD:6480667 NCBI chr 1:243,049,064...243,173,636
Ensembl chr 1:233,636,452...233,760,626
JBrowse link
G P2rx2 purinergic receptor P2X 2 involved_in
acts_upstream_of_or_within
IEA
ISO
GO_REF:0000107
MGI:1097160|MGI:2687349 (PMID:15961431)
Ensembl
RGD
PMID:15961431 GO_REF:0000107 NCBI chr12:51,999,107...52,002,627
Ensembl chr12:46,339,549...46,342,891
JBrowse link
G P2rx3 purinergic receptor P2X 3 involved_in
acts_upstream_of_or_within
IEA
ISO
GO_REF:0000107
MGI:1934019|MGI:2665170 (PMID:11069181), (PMID:15961431)
Ensembl
RGD
PMID:11069181 PMID:15961431 GO_REF:0000107 NCBI chr 3:90,487,506...90,531,315
Ensembl chr 3:70,080,851...70,125,178
JBrowse link
G Pla2g6 phospholipase A2 group VI IMP RGD PMID:12750876 RGD:6482755 NCBI chr 7:112,731,803...112,771,978
Ensembl chr 7:110,851,378...110,891,114
JBrowse link
G Ptger3 prostaglandin E receptor 3 IMP RGD PMID:18562635 RGD:10043314 NCBI chr 2:249,264,985...249,409,966
Ensembl chr 2:246,606,183...246,684,434
JBrowse link
G Trpa1 transient receptor potential cation channel, subfamily A, member 1 IMP RGD PMID:21367919 RGD:10043365 NCBI chr 5:9,163,060...9,217,325
Ensembl chr 5:4,379,999...4,433,570
JBrowse link
G Trpv1 transient receptor potential cation channel, subfamily V, member 1 acts_upstream_of_or_within ISO MGI:1934023 (PMID:12161756) RGD PMID:12161756 NCBI chr10:58,349,936...58,375,021
Ensembl chr10:57,851,428...57,876,513
JBrowse link
uterine smooth muscle contraction term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Agt angiotensinogen IDA RGD PMID:21401609 RGD:5129172 NCBI chr19:69,426,540...69,447,017
Ensembl chr19:52,529,185...52,540,977
JBrowse link
vascular associated smooth muscle contraction term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Acta1 actin, alpha 1, skeletal muscle involved_in IEA GO_REF:0000107 Ensembl GO_REF:0000107 NCBI chr19:68,781,168...68,784,194
Ensembl chr19:51,883,715...51,886,742
JBrowse link
G Acta2 actin alpha 2, smooth muscle involved_in
acts_upstream_of_or_within
IEA
ISO
GO_REF:0000107
MGI:3665248 (PMID:11053242)
Ensembl
RGD
PMID:11053242 GO_REF:0000107 NCBI chr 1:241,159,723...241,172,503
Ensembl chr 1:231,746,548...231,759,554
JBrowse link
G Actc1 actin, alpha, cardiac muscle 1 involved_in IEA GO_REF:0000107 Ensembl GO_REF:0000107 NCBI chr 3:121,266,291...121,271,827
Ensembl chr 3:100,811,987...100,817,523
JBrowse link
G Actg2 actin gamma 2, smooth muscle involved_in IEA GO_REF:0000107 Ensembl GO_REF:0000107 NCBI chr 4:117,579,513...117,604,379
Ensembl chr 4:116,021,832...116,046,465
JBrowse link
G Comp cartilage oligomeric matrix protein involved_in
acts_upstream_of_or_within
IEA
ISO
GO_REF:0000107
MGI:2180787 (PMID:27498005)
Ensembl
RGD
PMID:27498005 GO_REF:0000107 NCBI chr16:19,081,172...19,089,548
Ensembl chr16:19,047,207...19,055,845
JBrowse link
G Rap1gds1 Rap1 GTPase-GDP dissociation stimulator 1 IMP RGD PMID:18348285 RGD:2314690 NCBI chr 2:227,500,366...227,645,213
Ensembl chr 2:227,500,367...227,645,169
JBrowse link
G Slc8a1 solute carrier family 8 member A1 involved_in ISO (PMID:10967099) RGD PMID:10967099 NCBI chr 6:18,975,498...19,299,704
Ensembl chr 6:13,194,662...13,535,628
JBrowse link
vein smooth muscle contraction term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Edn1 endothelin 1 involved_in ISO
IBA
(PMID:9422810)
GO_REF:0000033
RGD
GO_Central
PMID:9422810 GO_REF:0000033 NCBI chr17:22,660,799...22,666,687
Ensembl chr17:22,454,420...22,460,885
JBrowse link
G Edn2 endothelin 2 involved_in ISO
IBA
IEA
(PMID:8982507), (PMID:9422810)
GO_REF:0000033
GO_REF:0000107
RGD
GO_Central
Ensembl
PMID:8982507 PMID:9422810 GO_REF:0000033 GO_REF:0000107 NCBI chr 5:139,036,576...139,042,074
Ensembl chr 5:133,751,217...133,756,814
JBrowse link
G Edn3 endothelin 3 involved_in ISO
IBA
(PMID:8982507)
GO_REF:0000033
RGD
GO_Central
PMID:8982507 GO_REF:0000033 NCBI chr 3:183,980,458...184,004,958
Ensembl chr 3:163,562,520...163,585,093
JBrowse link
G Ednrb endothelin receptor type B involved_in ISO (PMID:8982507) RGD PMID:8982507 NCBI chr15:87,055,490...87,086,765
Ensembl chr15:80,643,043...80,672,115
JBrowse link

Term paths to the root
Path 1
Term Annotations click to browse term
  biological_process 20536
    multicellular organismal process 8969
      system process 3558
        muscle system process 485
          muscle contraction 344
            smooth muscle contraction 127
              colon smooth muscle contraction + 2
              gastro-intestinal system smooth muscle contraction + 15
              hindgut contraction + 3
              negative regulation of smooth muscle contraction + 24
              phasic smooth muscle contraction + 30
              positive regulation of smooth muscle contraction + 37
              regulation of smooth muscle contraction + 74
              small intestine smooth muscle contraction + 7
              tonic smooth muscle contraction + 15
              urinary tract smooth muscle contraction + 16
              uterine smooth muscle contraction + 13
              vascular associated smooth muscle contraction + 35
paths to the root