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ONTOLOGY REPORT - ANNOTATIONS

Term:regulation of muscle contraction
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Accession:GO:0006937 term browser browse the term
Definition:Any process that modulates the frequency, rate or extent of muscle contraction.

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regulation of muscle contraction term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Adra1a adrenoceptor alpha 1A involved_in IEA InterPro GO_REF:0000002 NCBI chrNW_004624758:21,557,161...21,665,432
Ensembl chrNW_004624758:21,569,908...21,665,244 		JBrowse link
G Adra1b adrenoceptor alpha 1B involved_in IEA InterPro GO_REF:0000002 NCBI chrNW_004624733:29,545,870...29,661,954
Ensembl chrNW_004624733:29,545,789...29,662,028 		JBrowse link
G Anxa6 annexin A6 acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chrNW_004624733:41,024,503...41,071,390
Ensembl chrNW_004624733:41,024,514...41,071,353 		JBrowse link
G Chrna3 cholinergic receptor nicotinic alpha 3 subunit acts_upstream_of_or_within ISO (PMID:10318955) MGI PMID:10318955 NCBI chrNW_004624894:2,324,480...2,357,389
Ensembl chrNW_004624894:2,324,501...2,357,723 		JBrowse link
G Kcna1 potassium voltage-gated channel subfamily A member 1 involved_in ISO PMID:22206926 UniProt PMID:22206926 RGD:10047237 NCBI chrNW_004624860:1,915,108...1,923,071
Ensembl chrNW_004624860:1,915,344...1,923,062 		JBrowse link
G Prkca protein kinase C alpha acts_upstream_of_or_within ISO (PMID:14966518) MGI PMID:14966518 NCBI chrNW_004624870:1,589,775...2,023,160
Ensembl chrNW_004624870:1,596,102...2,023,172 		JBrowse link
G Tnnc1 troponin C1, slow skeletal and cardiac type involved_in ISO (PMID:18092822) BHF-UCL PMID:18092822 NCBI chrNW_004624822:4,763,285...4,767,810
Ensembl chrNW_004624822:4,764,742...4,770,293 		JBrowse link
G Tnni3 troponin I3, cardiac type acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chrNW_004624832:2,088,455...2,092,774
Ensembl chrNW_004624832:2,088,589...2,092,771 		JBrowse link
G Tnnt1 troponin T1, slow skeletal type involved_in IEA InterPro GO_REF:0000002 NCBI chrNW_004624832:2,093,852...2,100,647
Ensembl chrNW_004624832:2,094,903...2,100,560 		JBrowse link
G Tnnt2 troponin T2, cardiac type involved_in IEA InterPro GO_REF:0000002 NCBI chrNW_004624807:9,332,202...9,348,610
Ensembl chrNW_004624807:9,336,904...9,348,396 		JBrowse link
G Tnnt3 troponin T3, fast skeletal type involved_in IEA InterPro GO_REF:0000002 NCBI chrNW_004624767:14,784,267...14,801,477
Ensembl chrNW_004624767:14,787,248...14,802,098 		JBrowse link
negative regulation of cardiac muscle cell contraction term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Adcy10 adenylate cyclase 10 ISO RGD PMID:31754830 RGD:329403060 NCBI chrNW_004624826:5,844,868...5,897,541
Ensembl chrNW_004624826:5,845,001...5,897,497 		JBrowse link
negative regulation of cardiac muscle contraction term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Pde5a phosphodiesterase 5A involved_in ISO (PMID:19127022) BHF-UCL PMID:19127022 NCBI chrNW_004624964:11,085...126,027
Ensembl chrNW_004624964:14,216...126,553 		JBrowse link
G Sri sorcin involved_in ISO (PMID:22326846) BHF-UCL PMID:22326846 NCBI chrNW_004624809:5,160,731...5,187,914
Ensembl chrNW_004624809:5,160,737...5,191,514 		JBrowse link
G Zc3h12a zinc finger CCCH-type containing 12A involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004624764:20,224,919...20,234,108
Ensembl chrNW_004624764:20,224,906...20,234,629 		JBrowse link
negative regulation of muscle contraction term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Tnnt1 troponin T1, slow skeletal type involved_in ISO (PMID:18032382) UniProt PMID:18032382 NCBI chrNW_004624832:2,093,852...2,100,647
Ensembl chrNW_004624832:2,094,903...2,100,560 		JBrowse link
negative regulation of muscle filament sliding term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Dbn1 drebrin 1 ISO RGD PMID:17543276 RGD:10398727 NCBI chrNW_004624733:12,616,537...12,631,967
Ensembl chrNW_004624733:12,616,423...12,632,133 		JBrowse link
negative regulation of small intestine smooth muscle contraction term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Kcnma1 potassium calcium-activated channel subfamily M alpha 1 ISO RGD PMID:23647678 RGD:10412032 NCBI chrNW_004624754:10,152,635...10,885,239
Ensembl chrNW_004624754:10,153,809...10,885,079 		JBrowse link
G Ptger3 prostaglandin E receptor 3 ISO RGD PMID:11991626 RGD:10003093 NCBI chrNW_004624742:25,177,340...25,356,911 JBrowse link
G Ptger4 prostaglandin E receptor 4 ISO RGD PMID:11991626 RGD:10003093 NCBI chrNW_004624759:14,243,887...14,259,090
Ensembl chrNW_004624759:14,244,899...14,258,445 		JBrowse link
negative regulation of smooth muscle contraction term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Adrb1 adrenoceptor beta 1 ISO RGD PMID:18306009 RGD:5129131 NCBI chrNW_004624737:32,536,096...32,563,721
Ensembl chrNW_004624737:32,541,598...32,563,424 		JBrowse link
G Adrb2 adrenoceptor beta 2 acts_upstream_of_or_within ISO (PMID:12925702) MGI PMID:12925702 NCBI chrNW_004624774:8,211,723...8,215,962
Ensembl chrNW_004624774:8,211,984...8,213,240 		JBrowse link
G Calca calcitonin related polypeptide alpha acts_upstream_of_or_within ISO (PMID:9322931) RGD
MGI		 PMID:9322931 PMID:11230364 RGD:68890 NCBI chrNW_004624766:6,764,388...6,771,396
Ensembl chrNW_004624766:6,766,185...6,768,173 		JBrowse link
G Calcrl calcitonin receptor like receptor ISO RGD PMID:17363466 RGD:1625357 NCBI chrNW_004624899:2,487,261...2,593,304
Ensembl chrNW_004624899:2,487,225...2,594,780 		JBrowse link
G Irag1 inositol 1,4,5-triphosphate receptor associated 1 acts_upstream_of_or_within ISO (PMID:15483626) MGI PMID:15483626 NCBI chrNW_004624766:2,656,991...2,764,971
Ensembl chrNW_004624766:2,653,804...2,764,898 		JBrowse link
G Prkg1 protein kinase cGMP-dependent 1 acts_upstream_of_or_within ISO (PMID:15483626) MGI PMID:15483626 NCBI chrNW_004624791:11,334,146...12,656,480
Ensembl chrNW_004624791:11,338,510...12,654,812 		JBrowse link
G Ptgs2 prostaglandin-endoperoxide synthase 2 ISO RGD PMID:21051526 RGD:5135055 NCBI chrNW_004624814:6,897,818...6,904,890
Ensembl chrNW_004624814:6,897,857...6,903,728 		JBrowse link
negative regulation of striated muscle contraction term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Arg2 arginase 2 ISO RGD PMID:16537391 RGD:1582129 NCBI chrNW_004624734:33,321,161...33,352,306
Ensembl chrNW_004624734:33,321,295...33,352,277 		JBrowse link
G Atp2a1 ATPase sarcoplasmic/endoplasmic reticulum Ca2+ transporting 1 involved_in ISO (PMID:10914677) UniProt PMID:10914677 NCBI chrNW_004624782:12,867,404...12,883,685
Ensembl chrNW_004624782:12,867,230...12,883,685 		JBrowse link
G Grk2 G protein-coupled receptor kinase 2 involved_in ISO (PMID:15051637) BHF-UCL PMID:15051637 NCBI chrNW_004624767:19,212,218...19,231,218
Ensembl chrNW_004624767:19,210,965...19,231,082 		JBrowse link
negative regulation of uterine smooth muscle contraction term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Adra2a adrenoceptor alpha 2A ISO RGD PMID:17664026 RGD:6893570 NCBI chrNW_004624737:35,262,779...35,265,566
Ensembl chrNW_004624737:35,264,099...35,265,490 		JBrowse link
G Adra2c adrenoceptor alpha 2C ISO RGD PMID:17664026 RGD:6893570 NCBI chrNW_004624755:24,299,985...24,301,824
Ensembl chrNW_004624755:24,300,347...24,301,693 		JBrowse link
negative regulation of vascular associated smooth muscle contraction term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Arhgap42 Rho GTPase activating protein 42 acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chrNW_004624878:1,803,353...2,095,767
Ensembl chrNW_004624878:1,811,013...2,095,733 		JBrowse link
G Dock4 dedicator of cytokinesis 4 involved_in ISO (PMID:22158624) BHF-UCL PMID:22158624 NCBI chrNW_004624739:17,705,893...18,152,679
Ensembl chrNW_004624739:17,705,769...18,152,858 		JBrowse link
G Dock5 dedicator of cytokinesis 5 involved_in ISO (PMID:22158624) BHF-UCL PMID:22158624 NCBI chrNW_004624758:20,255,036...20,444,194
Ensembl chrNW_004624758:20,255,062...20,440,370 		JBrowse link
G Stub1 STIP1 homology and U-box containing protein 1 involved_in ISO PMID:19237536 UniProt PMID:19237536 RGD:401901238 NCBI chrNW_004624913:1,491,873...1,494,249
Ensembl chrNW_004624913:1,491,991...1,494,249 		JBrowse link
negative regulation of ventricular cardiac muscle cell action potential term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Bin1 bridging integrator 1 involved_in ISO (PMID:24836577) ARUK-UCL PMID:24836577 NCBI chrNW_004624732:13,543,975...13,592,942
Ensembl chrNW_004624732:13,544,507...13,592,795 		JBrowse link
neurotransmitter secretion involved in regulation of skeletal muscle contraction term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Nr4a1 nuclear receptor subfamily 4 group A member 1 ISO RGD PMID:29530712 RGD:40924655 NCBI chrNW_004624816:271,345...288,265
Ensembl chrNW_004624816:267,303...293,227 		JBrowse link
positive regulation of atrial cardiac muscle cell action potential term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Trpm4 transient receptor potential cation channel subfamily M member 4 ISO RGD PMID:23954346 RGD:10003031 NCBI chrNW_004624832:4,902,335...4,937,806
Ensembl chrNW_004624832:4,902,659...4,936,926 		JBrowse link
positive regulation of cardiac muscle cell contraction term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Cacna1h calcium voltage-gated channel subunit alpha1 H ISO RGD PMID:19443576 RGD:7205486 NCBI chrNW_004624913:1,926,405...1,952,426
Ensembl chrNW_004624913:1,891,156...1,949,633 		JBrowse link
positive regulation of cardiac muscle contraction term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ace2 angiotensin converting enzyme 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004624829:344,823...391,451
Ensembl chrNW_004624829:344,933...391,527 		JBrowse link
G Adra1a adrenoceptor alpha 1A involved_in ISO PMID:19011682 BHF-UCL PMID:19011682 RGD:5688340 NCBI chrNW_004624758:21,557,161...21,665,432
Ensembl chrNW_004624758:21,569,908...21,665,244 		JBrowse link
G Ccn2 cellular communication network factor 2 ISO RGD PMID:19707545 RGD:2314476 NCBI chrNW_004624753:6,022,033...6,024,866
Ensembl chrNW_004624753:6,023,069...6,024,833 		JBrowse link
G Chga chromogranin A involved_in ISO PMID:22459152 UniProt PMID:22459152 RGD:6906968 NCBI chrNW_004624734:9,405,121...9,416,774
Ensembl chrNW_004624734:9,404,916...9,416,902 		JBrowse link
G Hsp90aa1 heat shock protein 90 alpha family class A member 1 ISO RGD PMID:21620734 RGD:5686387 NCBI chrNW_004624734:2,233,932...2,239,687
Ensembl chrNW_004624734:2,233,547...2,241,436 		JBrowse link
G Kcnq1 potassium voltage-gated channel subfamily Q member 1 involved_in ISO (PMID:19646991) BHF-UCL PMID:19646991 NCBI chrNW_004624767:15,252,961...15,613,373
Ensembl chrNW_004624767:15,252,950...15,613,562 		JBrowse link
G Nppa natriuretic peptide A involved_in ISO (PMID:19646991) BHF-UCL PMID:19646991 NCBI chrNW_004624818:1,147,654...1,149,722
Ensembl chrNW_004624818:1,147,974...1,148,927 		JBrowse link
G Rgs2 regulator of G protein signaling 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004624814:754,743...758,148
Ensembl chrNW_004624814:753,164...758,192 		JBrowse link
G Smtn smoothelin acts_upstream_of_or_within ISO (PMID:18678771) MGI PMID:18678771 NCBI chrNW_004624747:7,559,364...7,582,080
Ensembl chrNW_004624747:7,559,026...7,585,154 		JBrowse link
G Ucn urocortin ISO RGD PMID:19460778 RGD:5508168 NCBI chrNW_004624738:9,393,004...9,393,966
Ensembl chrNW_004624738:9,393,329...9,393,706 		JBrowse link
positive regulation of colon smooth muscle contraction term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Kit KIT proto-oncogene, receptor tyrosine kinase ISO RGD PMID:17322067 RGD:12910822 NCBI chrNW_004624761:14,733,912...14,831,428 JBrowse link
G Ptger3 prostaglandin E receptor 3 ISO RGD PMID:24170253 RGD:10043193 NCBI chrNW_004624742:25,177,340...25,356,911 JBrowse link
positive regulation of fast-twitch skeletal muscle fiber contraction term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Actn3 actinin alpha 3 involved_in ISO (PMID:18178581) UniProt PMID:18178581 NCBI chrNW_004624767:19,844,996...19,859,274
Ensembl chrNW_004624767:19,844,884...19,858,950 		JBrowse link
G Atp2a1 ATPase sarcoplasmic/endoplasmic reticulum Ca2+ transporting 1 involved_in ISO (PMID:12479237) UniProt PMID:12479237 NCBI chrNW_004624782:12,867,404...12,883,685
Ensembl chrNW_004624782:12,867,230...12,883,685 		JBrowse link
G Mylk2 myosin light chain kinase 2 ISO RGD PMID:12748068 RGD:1580242 NCBI chrNW_004624741:680,230...693,895
Ensembl chrNW_004624741:680,016...693,908 		JBrowse link
positive regulation of gastro-intestinal system smooth muscle contraction term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ghrl ghrelin and obestatin prepropeptide ISO RGD PMID:15890336 RGD:12907565 NCBI chrNW_004624731:5,257,813...5,262,878
Ensembl chrNW_004624731:5,257,830...5,262,473 		JBrowse link
G Ptafr platelet activating factor receptor ISO RGD PMID:10821044 RGD:10043148 NCBI chrNW_004624764:11,996,454...12,025,751
Ensembl chrNW_004624764:11,998,657...11,999,685 		JBrowse link
G Spx spexin hormone involved_in IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004624752:17,146,644...17,154,855
Ensembl chrNW_004624752:17,147,925...17,152,430 		JBrowse link
positive regulation of hindgut contraction term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Oxt oxytocin/neurophysin I prepropeptide ISO RGD PMID:19258489 RGD:2304084 NCBI chrNW_004624741:4,200,594...4,201,416
Ensembl chrNW_004624741:4,200,478...4,201,580 		JBrowse link
G Pawr pro-apoptotic WT1 regulator ISO RGD PMID:14724155 RGD:9835340 NCBI chrNW_004624750:18,562,270...18,710,397
Ensembl chrNW_004624750:18,562,221...18,705,540 		JBrowse link
positive regulation of muscle contraction term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Eno1 enolase 1 involved_in ISO (PMID:15459207) CAFA PMID:15459207 NCBI chrNW_004624818:3,223,384...3,235,128
Ensembl chrNW_004624818:3,223,308...3,238,419 		JBrowse link
G Map2k1 mitogen-activated protein kinase kinase 1 involved_in ISO PMID:15459207 CAFA PMID:15459207 RGD:12793039 NCBI chrNW_004624781:6,222,365...6,285,398
Ensembl chrNW_004624781:6,222,365...6,285,531 		JBrowse link
positive regulation of pyloric antrum smooth muscle contraction term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Kit KIT proto-oncogene, receptor tyrosine kinase ISO RGD PMID:9832052 RGD:12910753 NCBI chrNW_004624761:14,733,912...14,831,428 JBrowse link
positive regulation of skeletal muscle contraction by regulation of release of sequestered calcium ion term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Gsto1 glutathione S-transferase omega 1 involved_in ISO (PMID:11035031) BHF-UCL PMID:11035031 NCBI chrNW_004624831:3,342,539...3,351,766
Ensembl chrNW_004624831:3,342,584...3,352,467 		JBrowse link
positive regulation of small intestine smooth muscle contraction term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ghrl ghrelin and obestatin prepropeptide ISO RGD PMID:15890336 PMID:21874246 RGD:12907565 RGD:12910732 NCBI chrNW_004624731:5,257,813...5,262,878
Ensembl chrNW_004624731:5,257,830...5,262,473 		JBrowse link
G Ghsr growth hormone secretagogue receptor ISO RGD PMID:15890336 PMID:21874246 RGD:12907565 RGD:12910732 NCBI chrNW_004624730:50,484,763...50,492,443
Ensembl chrNW_004624730:50,488,887...50,492,405 		JBrowse link
G Kit KIT proto-oncogene, receptor tyrosine kinase ISO RGD PMID:7542218 RGD:12910748 NCBI chrNW_004624761:14,733,912...14,831,428 JBrowse link
positive regulation of smooth muscle contraction term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ada adenosine deaminase acts_upstream_of_or_within ISO (PMID:18340377) MGI PMID:18340377 NCBI chrNW_004624790:9,809,550...9,829,199
Ensembl chrNW_004624790:9,809,492...9,829,883 		JBrowse link
G Adra1a adrenoceptor alpha 1A involved_in ISO (PMID:21335239) RGD
BHF-UCL		 PMID:19041301 PMID:21335239 RGD:5688345 NCBI chrNW_004624758:21,557,161...21,665,432
Ensembl chrNW_004624758:21,569,908...21,665,244 		JBrowse link
G Chrm3 cholinergic receptor muscarinic 3 involved_in
acts_upstream_of_or_within		 IEA InterPro
Ensembl		 GO_REF:0000002 GO_REF:0000107 NCBI chrNW_004624775:10,948,075...11,427,898
Ensembl chrNW_004624775:10,949,983...10,951,755 		JBrowse link
G Cttn cortactin involved_in ISO (PMID:24700464) UniProt PMID:24700464 NCBI chrNW_004624767:16,842,341...16,884,449
Ensembl chrNW_004624767:16,847,459...16,880,183 		JBrowse link
G Edn1 endothelin 1 acts_upstream_of_or_within ISO (PMID:8010105) RGD
MGI		 PMID:8010105 PMID:8893723 PMID:12396026 RGD:1581797 RGD:8662282 NCBI chrNW_004624756:13,842,482...13,849,003
Ensembl chrNW_004624756:13,842,164...13,849,029 		JBrowse link
G Edn2 endothelin 2 acts_upstream_of_or_within ISO (PMID:2768235) RGD
MGI		 PMID:2768235 PMID:12396026 RGD:1581797 NCBI chrNW_004624892:861,976...879,044
Ensembl chrNW_004624892:870,259...877,387 		JBrowse link
G F2r coagulation factor II thrombin receptor involved_in ISO
ISS		 RGD
UniProt		 PMID:14699501 GO_REF:0000024 RGD:1582292 NCBI chrNW_004624869:1,181,288...1,200,751
Ensembl chrNW_004624869:1,181,354...1,200,664 		JBrowse link
G Itga2 integrin subunit alpha 2 ISO SMC-containing collagen lattice contraction RGD PMID:16263112 RGD:2307398 NCBI chrNW_004624759:6,281,698...6,376,702
Ensembl chrNW_004624759:6,281,561...6,376,712 		JBrowse link
G Myocd myocardin involved_in ISO (PMID:17215356) BHF-UCL PMID:17215356 NCBI chrNW_004624877:618,789...647,471 JBrowse link
G Nmu neuromedin U involved_in ISO
IEA		 RGD
TreeGrafter		 PMID:16474416 GO_REF:0000118 RGD:1642122 NCBI chrNW_004624761:13,823,752...13,850,756
Ensembl chrNW_004624761:13,824,144...13,848,219 		JBrowse link
G Npnt nephronectin involved_in ISO (PMID:21335239) BHF-UCL PMID:21335239 NCBI chrNW_004624830:2,881,948...2,943,577
Ensembl chrNW_004624830:2,881,638...2,943,586 		JBrowse link
G Npy2r neuropeptide Y receptor Y2 ISO neuropeptide Y- and peptide YY-induced contraction in ascending and descending colon RGD PMID:10422644 RGD:1642606 NCBI chrNW_004624848:3,049,009...3,054,548
Ensembl chrNW_004624848:3,048,413...3,054,495 		JBrowse link
G Prok2 prokineticin 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004624773:6,310,025...6,323,245
Ensembl chrNW_004624773:6,307,653...6,323,208 		JBrowse link
G Ptafr platelet activating factor receptor ISO RGD PMID:10821044 RGD:10043148 NCBI chrNW_004624764:11,996,454...12,025,751
Ensembl chrNW_004624764:11,998,657...11,999,685 		JBrowse link
G Ptgs1 prostaglandin-endoperoxide synthase 1 ISO RGD PMID:18480553 RGD:2300247 NCBI chrNW_004624760:12,917,244...12,937,858
Ensembl chrNW_004624760:12,915,206...12,937,824 		JBrowse link
G Ptgs2 prostaglandin-endoperoxide synthase 2 ISO RGD PMID:18480553 RGD:2300247 NCBI chrNW_004624814:6,897,818...6,904,890
Ensembl chrNW_004624814:6,897,857...6,903,728 		JBrowse link
G Rhoa ras homolog family member A ISO RGD PMID:17379756 RGD:1642962 NCBI chrNW_004624730:3,316,122...3,361,820 JBrowse link
G Sphk1 sphingosine kinase 1 involved_in ISO (PMID:12847068) UniProt PMID:12847068 NCBI chrNW_004624801:6,253,219...6,257,128 JBrowse link
G Srf serum response factor involved_in ISO (PMID:17215356) BHF-UCL PMID:17215356 NCBI chrNW_004624754:16,371,995...16,381,287 JBrowse link
G Tbxa2r thromboxane A2 receptor acts_upstream_of_or_within ISO (PMID:12925702) MGI PMID:12925702 NCBI chrNW_004624828:6,291,010...6,312,438
Ensembl chrNW_004624828:6,291,167...6,309,482 		JBrowse link
positive regulation of smooth muscle contraction involved in micturition term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ptger3 prostaglandin E receptor 3 ISO RGD PMID:18562635 RGD:10043314 NCBI chrNW_004624742:25,177,340...25,356,911 JBrowse link
positive regulation of stomach fundus smooth muscle contraction term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Nmu neuromedin U involved_in ISO PMID:2055247 UniProt PMID:2055247 RGD:13461751 NCBI chrNW_004624761:13,823,752...13,850,756
Ensembl chrNW_004624761:13,824,144...13,848,219 		JBrowse link
positive regulation of striated muscle contraction term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Atp1a1 ATPase Na+/K+ transporting subunit alpha 1 acts_upstream_of_or_within ISO (PMID:11507009) MGI PMID:11507009 NCBI chrNW_004624772:12,099,523...12,127,437
Ensembl chrNW_004624772:12,099,435...12,127,737 		JBrowse link
G Trpv4 transient receptor potential cation channel subfamily V member 4 ISO RGD PMID:32706268 RGD:38549369 NCBI chrNW_004624747:10,675,625...10,685,351 JBrowse link
positive regulation of uterine smooth muscle contraction term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Abat 4-aminobutyrate aminotransferase ISO RGD PMID:12742000 RGD:10047059 NCBI chrNW_004624824:6,112,644...6,202,936
Ensembl chrNW_004624824:6,141,213...6,202,936 		JBrowse link
G Adra2b adrenoceptor alpha 2B ISO RGD PMID:17664026 PMID:19634638 RGD:2313546 RGD:6893570 NCBI chrNW_004624749:2,226,809...2,230,413
Ensembl chrNW_004624749:2,226,738...2,230,381 		JBrowse link
G Gper1 G protein-coupled estrogen receptor 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004624740:26,627,560...26,632,483
Ensembl chrNW_004624740:26,627,473...26,632,027 		JBrowse link
G Lck LCK proto-oncogene, Src family tyrosine kinase ISO RGD PMID:19208792 RGD:2316554 NCBI chrNW_004624764:15,469,582...15,495,351
Ensembl chrNW_004624764:15,472,685...15,495,351 		JBrowse link
G Oxt oxytocin/neurophysin I prepropeptide ISO RGD PMID:19164477 RGD:2303954 NCBI chrNW_004624741:4,200,594...4,201,416
Ensembl chrNW_004624741:4,200,478...4,201,580 		JBrowse link
G Oxtr oxytocin receptor ISO RGD PMID:19164477 RGD:2303954 NCBI chrNW_004624731:3,367,645...3,384,815
Ensembl chrNW_004624731:3,370,701...3,385,640 		JBrowse link
G Tacr1 tachykinin receptor 1 ISO RGD PMID:12390879 RGD:2305937 NCBI chrNW_004624749:28,243,667...28,455,012
Ensembl chrNW_004624749:28,243,640...28,455,086 		JBrowse link
G Tacr2 tachykinin receptor 2 ISO RGD PMID:12390879 RGD:2305937 NCBI chrNW_004624754:3,658,128...3,670,432
Ensembl chrNW_004624754:3,656,319...3,670,432 		JBrowse link
G Tacr3 tachykinin receptor 3 ISO RGD PMID:12390879 RGD:2305937 NCBI chrNW_004624830:4,635,987...4,704,251 JBrowse link
positive regulation of vascular associated smooth muscle contraction term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Chrm3 cholinergic receptor muscarinic 3 ISO RGD PMID:8428203 RGD:2303387 NCBI chrNW_004624775:10,948,075...11,427,898
Ensembl chrNW_004624775:10,949,983...10,951,755 		JBrowse link
G Rhoa ras homolog family member A acts_upstream_of_or_within ISO (PMID:24335996) MGI PMID:24335996 NCBI chrNW_004624730:3,316,122...3,361,820 JBrowse link
regulation of atrial cardiac muscle cell action potential term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ank2 ankyrin 2 involved_in ISO (PMID:12571597) BHF-UCL PMID:12571597 NCBI chrNW_004624838:6,490,434...7,023,945
Ensembl chrNW_004624838:6,548,159...7,023,945 		JBrowse link
G Gja5 gap junction protein alpha 5 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004624772:16,810,723...16,828,328
Ensembl chrNW_004624772:16,813,011...16,814,084 		JBrowse link
G Ryr2 ryanodine receptor 2 involved_in ISO (PMID:17875969) BHF-UCL PMID:17875969 NCBI chrNW_004624775:12,954,653...13,650,449
Ensembl chrNW_004624775:12,956,042...13,419,381 		JBrowse link
regulation of cardiac muscle cell action potential involved in regulation of contraction term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Akap9 A-kinase anchoring protein 9 involved_in ISO (PMID:18093912) BHF-UCL PMID:18093912 NCBI chrNW_004624809:1,101,941...1,258,402
Ensembl chrNW_004624809:1,103,538...1,257,809 		JBrowse link
G Atp2a2 ATPase sarcoplasmic/endoplasmic reticulum Ca2+ transporting 2 involved_in ISO PMID:9851937 BHF-UCL PMID:9851937 RGD:10047146 NCBI chrNW_004624747:21,509,360...21,567,424
Ensembl chrNW_004624747:21,509,366...21,568,098 		JBrowse link
G Cav3 caveolin 3 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004624731:3,348,172...3,363,772
Ensembl chrNW_004624731:3,347,984...3,364,581 		JBrowse link
G Fgf13 fibroblast growth factor 13 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004624808:7,577,422...8,091,216
Ensembl chrNW_004624808:7,578,286...8,091,811 		JBrowse link
G Hcn4 hyperpolarization activated cyclic nucleotide gated potassium channel 4 involved_in ISO (PMID:16407510) BHF-UCL PMID:16407510 NCBI chrNW_004624781:968,608...1,007,969
Ensembl chrNW_004624781:968,748...1,008,200 		JBrowse link
G Rangrf RAN guanine nucleotide release factor involved_in ISO (PMID:21621375) BHF-UCL PMID:21621375 NCBI chrNW_004624786:10,866,724...10,868,136
Ensembl chrNW_004624786:10,866,834...10,867,983 		JBrowse link
regulation of cardiac muscle cell contraction term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Adora1 adenosine A1 receptor ISO RGD PMID:19525381 RGD:2317914 NCBI chrNW_004624807:7,674,164...7,705,736
Ensembl chrNW_004624807:7,674,927...7,705,051 		JBrowse link
G Adrb1 adrenoceptor beta 1 ISO RGD PMID:19525381 PMID:22216755 RGD:2317914 RGD:6893639 NCBI chrNW_004624737:32,536,096...32,563,721
Ensembl chrNW_004624737:32,541,598...32,563,424 		JBrowse link
G Akap6 A-kinase anchoring protein 6 involved_in ISO PMID:11179196 BHF-UCL PMID:11179196 RGD:8553373 NCBI chrNW_004624838:3,992,769...4,393,055
Ensembl chrNW_004624838:3,999,663...4,393,055 		JBrowse link
G Ank2 ankyrin 2 involved_in ISO (PMID:17242276) BHF-UCL PMID:17242276 NCBI chrNW_004624838:6,490,434...7,023,945
Ensembl chrNW_004624838:6,548,159...7,023,945 		JBrowse link
G Atp1a1 ATPase Na+/K+ transporting subunit alpha 1 ISO RGD PMID:15629895 RGD:6903236 NCBI chrNW_004624772:12,099,523...12,127,437
Ensembl chrNW_004624772:12,099,435...12,127,737 		JBrowse link
G Casq2 calsequestrin 2 involved_in ISO PMID:17569730 BHF-UCL PMID:17569730 RGD:2314601 NCBI chrNW_004624772:11,458,994...11,521,809
Ensembl chrNW_004624772:11,456,554...11,521,939 		JBrowse link
G Fxyd1 FXYD domain containing ion transport regulator 1 ISO RGD PMID:14684371 RGD:9685468 NCBI chrNW_004624794:8,368,519...8,372,480
Ensembl chrNW_004624794:8,368,519...8,371,764 		JBrowse link
G Gata4 GATA binding protein 4 ISO RGD PMID:21702924 RGD:7207043 NCBI chrNW_004624758:25,278,878...25,319,317
Ensembl chrNW_004624758:25,278,874...25,319,318 		JBrowse link
G Kcnj2 potassium inwardly rectifying channel subfamily J member 2 ISO RGD PMID:22426100 RGD:7247430 NCBI chrNW_004624801:365,393...375,802
Ensembl chrNW_004624801:365,361...374,487 		JBrowse link
G Myh7b myosin heavy chain 7B ISO RGD PMID:32207065 RGD:126925946 NCBI chrNW_004624842:4,395,859...4,442,557
Ensembl chrNW_004624842:4,395,859...4,433,985 		JBrowse link
G Pln phospholamban acts_upstream_of_or_within
involved_in		 ISO (PMID:8620604)
(PMID:26673394)		 MGI
ComplexPortal		 PMID:8620604 PMID:26673394 NCBI chrNW_004624798:11,522,245...11,528,741
Ensembl chrNW_004624798:11,522,269...11,528,775 		JBrowse link
G Scn5a sodium voltage-gated channel alpha subunit 5 involved_in
acts_upstream_of_or_within		 ISO (PMID:22529811)
(PMID:16172272)		 BHF-UCL
MGI		 PMID:16172272 PMID:22529811 NCBI chrNW_004624731:2,401,358...2,498,212
Ensembl chrNW_004624731:2,401,380...2,498,211 		JBrowse link
G Sri sorcin involved_in ISO (PMID:12754254), (PMID:17130302) BHF-UCL PMID:12754254 PMID:17130302 NCBI chrNW_004624809:5,160,731...5,187,914
Ensembl chrNW_004624809:5,160,737...5,191,514 		JBrowse link
G Stc1 stanniocalcin 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004624758:19,035,478...19,047,633
Ensembl chrNW_004624758:19,035,338...19,047,871 		JBrowse link
G Sumo1 small ubiquitin like modifier 1 involved_in ISO (PMID:21900893) BHF-UCL PMID:21900893 NCBI chrNW_004624765:14,205,071...14,229,864
Ensembl chrNW_004624765:14,205,051...14,229,864 		JBrowse link
regulation of cardiac muscle contraction term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Adora1 adenosine A1 receptor ISO RGD PMID:20334814 RGD:2317910 NCBI chrNW_004624807:7,674,164...7,705,736
Ensembl chrNW_004624807:7,674,927...7,705,051 		JBrowse link
G Adra1a adrenoceptor alpha 1A involved_in IEA InterPro GO_REF:0000002 NCBI chrNW_004624758:21,557,161...21,665,432
Ensembl chrNW_004624758:21,569,908...21,665,244 		JBrowse link
G Adra1b adrenoceptor alpha 1B involved_in IEA InterPro GO_REF:0000002 NCBI chrNW_004624733:29,545,870...29,661,954
Ensembl chrNW_004624733:29,545,789...29,662,028 		JBrowse link
G Agrn agrin involved_in ISO (PMID:19376779) BHF-UCL PMID:19376779 NCBI chrNW_004624818:8,475,453...8,508,818
Ensembl chrNW_004624818:8,476,562...8,508,786 		JBrowse link
G Ank2 ankyrin 2 involved_in ISO (PMID:15178757) BHF-UCL PMID:15178757 NCBI chrNW_004624838:6,490,434...7,023,945
Ensembl chrNW_004624838:6,548,159...7,023,945 		JBrowse link
G Bmp10 bone morphogenetic protein 10 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004624762:4,482,708...4,493,295
Ensembl chrNW_004624762:4,482,674...4,493,329 		JBrowse link
G Calm1 calmodulin 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004624734:12,030,264...12,041,682
Ensembl chrNW_004624734:12,030,001...12,041,772 		JBrowse link
G Calm2 calmodulin 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004624738:28,525,290...28,541,562
Ensembl chrNW_004624738:28,525,285...28,541,514 		JBrowse link
G Calm3 calmodulin 3 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004624832:6,957,775...6,966,505
Ensembl chrNW_004624832:6,958,820...6,966,514 		JBrowse link
G Cav3 caveolin 3 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004624731:3,348,172...3,363,772
Ensembl chrNW_004624731:3,347,984...3,364,581 		JBrowse link
G Ehd3 EH domain containing 3 involved_in ISO (PMID:25825486) UniProt PMID:25825486 NCBI chrNW_004624738:13,033,491...13,062,795
Ensembl chrNW_004624738:13,032,604...13,062,795 		JBrowse link
G Gja5 gap junction protein alpha 5 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004624772:16,810,723...16,828,328
Ensembl chrNW_004624772:16,813,011...16,814,084 		JBrowse link
G Hcn4 hyperpolarization activated cyclic nucleotide gated potassium channel 4 involved_in ISO (PMID:12750403) BHF-UCL PMID:12750403 NCBI chrNW_004624781:968,608...1,007,969
Ensembl chrNW_004624781:968,748...1,008,200 		JBrowse link
G Nkx2-5 NK2 homeobox 5 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004624733:16,881,189...16,884,245
Ensembl chrNW_004624733:16,881,191...16,884,210 		JBrowse link
G P2rx4 purinergic receptor P2X 4 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004624747:21,783,445...21,796,501
Ensembl chrNW_004624747:21,783,381...21,796,260 		JBrowse link
G Rnf207 ring finger protein 207 involved_in IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004624818:5,176,316...5,183,610
Ensembl chrNW_004624818:5,178,299...5,183,610 		JBrowse link
G Ryr2 ryanodine receptor 2 involved_in ISO (PMID:11159936) BHF-UCL PMID:11159936 NCBI chrNW_004624775:12,954,653...13,650,449
Ensembl chrNW_004624775:12,956,042...13,419,381 		JBrowse link
G Scn10a sodium voltage-gated channel alpha subunit 10 involved_in ISO (PMID:20062061) BHF-UCL PMID:20062061 NCBI chrNW_004624731:2,254,445...2,356,174
Ensembl chrNW_004624731:2,254,445...2,355,738 		JBrowse link
G Smad7 SMAD family member 7 involved_in ISO (PMID:18952608) BHF-UCL PMID:18952608 NCBI chrNW_004624778:12,415,364...12,444,882
Ensembl chrNW_004624778:12,415,282...12,444,835 		JBrowse link
regulation of cardiac muscle contraction by calcium ion signaling term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ank2 ankyrin 2 involved_in ISO (PMID:12571597) BHF-UCL PMID:12571597 NCBI chrNW_004624838:6,490,434...7,023,945
Ensembl chrNW_004624838:6,548,159...7,023,945 		JBrowse link
G Atp1b1 ATPase Na+/K+ transporting subunit beta 1 involved_in ISO (PMID:19683723) BHF-UCL PMID:19683723 NCBI chrNW_004624826:7,058,046...7,076,919
Ensembl chrNW_004624826:7,054,371...7,076,919 		JBrowse link
G Atp2a2 ATPase sarcoplasmic/endoplasmic reticulum Ca2+ transporting 2 involved_in ISO PMID:9851937
(PMID:10587333)		 BHF-UCL PMID:9851937 PMID:10587333 RGD:10047146 NCBI chrNW_004624747:21,509,360...21,567,424
Ensembl chrNW_004624747:21,509,366...21,568,098 		JBrowse link
G Hdac4 histone deacetylase 4 acts_upstream_of_or_within ISO (PMID:18250163) MGI PMID:18250163 NCBI chrNW_004624847:3,846,196...4,101,537
Ensembl chrNW_004624847:3,845,858...4,101,487 		JBrowse link
G Ryr2 ryanodine receptor 2 involved_in ISO (PMID:17875969) BHF-UCL PMID:17875969 NCBI chrNW_004624775:12,954,653...13,650,449
Ensembl chrNW_004624775:12,956,042...13,419,381 		JBrowse link
G Slc9a1 solute carrier family 9 member A1 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004624764:11,041,118...11,095,892
Ensembl chrNW_004624764:11,039,051...11,095,885 		JBrowse link
G Tnni3 troponin I3, cardiac type involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004624832:2,088,455...2,092,774
Ensembl chrNW_004624832:2,088,589...2,092,771 		JBrowse link
regulation of cardiac muscle contraction by regulation of the release of sequestered calcium ion term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ank2 ankyrin 2 involved_in ISO (PMID:17178715)
(PMID:17178715), (PMID:21859974)		 BHF-UCL PMID:17178715 PMID:21859974 NCBI chrNW_004624838:6,490,434...7,023,945
Ensembl chrNW_004624838:6,548,159...7,023,945 		JBrowse link
G Asph aspartate beta-hydroxylase involved_in ISO (PMID:17400717) BHF-UCL PMID:17400717 NCBI chrNW_004624744:30,190,625...30,420,501
Ensembl chrNW_004624744:30,190,513...30,418,467 		JBrowse link
G Calm1 calmodulin 1 involved_in ISO (PMID:20226167) BHF-UCL PMID:20226167 NCBI chrNW_004624734:12,030,264...12,041,682
Ensembl chrNW_004624734:12,030,001...12,041,772 		JBrowse link
G Calm2 calmodulin 2 involved_in ISO (PMID:20226167) BHF-UCL PMID:20226167 NCBI chrNW_004624738:28,525,290...28,541,562
Ensembl chrNW_004624738:28,525,285...28,541,514 		JBrowse link
G Calm3 calmodulin 3 involved_in ISO (PMID:20226167) BHF-UCL PMID:20226167 NCBI chrNW_004624832:6,957,775...6,966,505
Ensembl chrNW_004624832:6,958,820...6,966,514 		JBrowse link
G Casq2 calsequestrin 2 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:9525981) Ensembl
TreeGrafter
MGI		 PMID:9525981 GO_REF:0000107 GO_REF:0000118 NCBI chrNW_004624772:11,458,994...11,521,809
Ensembl chrNW_004624772:11,456,554...11,521,939 		JBrowse link
G Clic2 chloride intracellular channel 2 involved_in ISO (PMID:15147738) BHF-UCL PMID:15147738 NCBI chrNW_004624963:21,115...47,757 JBrowse link
G Dmd dystrophin involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004624762:22,306,962...24,846,427
Ensembl chrNW_004624762:22,746,729...24,847,938 		JBrowse link
G Fkbp1b FKBP prolyl isomerase 1B involved_in IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004624738:6,383,003...6,394,051
Ensembl chrNW_004624738:6,382,983...6,394,051 		JBrowse link
G Gsto1 glutathione S-transferase omega 1 involved_in ISO (PMID:11035031) BHF-UCL PMID:11035031 NCBI chrNW_004624831:3,342,539...3,351,766
Ensembl chrNW_004624831:3,342,584...3,352,467 		JBrowse link
G Pln phospholamban acts_upstream_of_or_within ISO (PMID:8831698) MGI PMID:8831698 NCBI chrNW_004624798:11,522,245...11,528,741
Ensembl chrNW_004624798:11,522,269...11,528,775 		JBrowse link
G Ryr2 ryanodine receptor 2 involved_in ISO (PMID:12837242)
(PMID:17875969)
(PMID:19220289)		 BHF-UCL PMID:12837242 PMID:17875969 PMID:19220289 NCBI chrNW_004624775:12,954,653...13,650,449
Ensembl chrNW_004624775:12,956,042...13,419,381 		JBrowse link
G Slc8a1 solute carrier family 8 member A1 involved_in ISO PMID:21779914 BHF-UCL PMID:21779914 RGD:8554732 NCBI chrNW_004624738:21,648,277...22,026,385
Ensembl chrNW_004624738:21,651,489...21,939,927 		JBrowse link
G Tmem38a transmembrane protein 38A acts_upstream_of_or_within ISO (PMID:17611541) MGI PMID:17611541 NCBI chrNW_004624908:837,753...849,972
Ensembl chrNW_004624908:836,347...849,998 		JBrowse link
G Tmem38b transmembrane protein 38B acts_upstream_of_or_within ISO (PMID:17611541) MGI PMID:17611541 NCBI chrNW_004624758:5,664,287...5,720,061
Ensembl chrNW_004624758:5,662,661...5,719,865 		JBrowse link
G Trdn triadin involved_in ISO (PMID:15041652) BHF-UCL PMID:15041652 NCBI chrNW_004624798:7,780,362...8,018,719 JBrowse link
regulation of excitatory postsynaptic membrane potential involved in skeletal muscle contraction term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Dmpk DM1 protein kinase acts_upstream_of_or_within ISO (PMID:11526199) MGI PMID:11526199 NCBI chrNW_004624832:7,419,529...7,429,744
Ensembl chrNW_004624832:7,419,689...7,429,084 		JBrowse link
regulation of hindgut contraction term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ghsr growth hormone secretagogue receptor ISO RGD PMID:16873401 RGD:1625276 NCBI chrNW_004624730:50,484,763...50,492,443
Ensembl chrNW_004624730:50,488,887...50,492,405 		JBrowse link
regulation of muscle filament sliding term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Mylk2 myosin light chain kinase 2 involved_in ISO (PMID:16448786) BHF-UCL PMID:16448786 NCBI chrNW_004624741:680,230...693,895
Ensembl chrNW_004624741:680,016...693,908 		JBrowse link
regulation of muscle filament sliding speed term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Tnnc1 troponin C1, slow skeletal and cardiac type involved_in ISO (PMID:10747195) BHF-UCL PMID:10747195 NCBI chrNW_004624822:4,763,285...4,767,810
Ensembl chrNW_004624822:4,764,742...4,770,293 		JBrowse link
G Tnnt2 troponin T2, cardiac type involved_in ISO PMID:10747195 BHF-UCL PMID:10747195 RGD:8554013 NCBI chrNW_004624807:9,332,202...9,348,610
Ensembl chrNW_004624807:9,336,904...9,348,396 		JBrowse link
regulation of skeletal muscle contraction term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Adgrd1 adhesion G protein-coupled receptor D1 involved_in ISO (PMID:39884271) UniProt PMID:39884271 NCBI chrNW_004624747:27,326,800...27,411,768
Ensembl chrNW_004624747:27,326,851...27,411,931 		JBrowse link
G Cav3 caveolin 3 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004624731:3,348,172...3,363,772
Ensembl chrNW_004624731:3,347,984...3,364,581 		JBrowse link
G CUNH12orf57 chromosome unknown C12orf57 homolog involved_in ISO (PMID:23453665), (PMID:23633300), (PMID:24798461) UniProt PMID:23453665 PMID:23633300 PMID:24798461 NCBI chrNW_004624860:3,578,147...3,580,059
Ensembl chrNW_004624860:3,578,336...3,580,059 		JBrowse link
G Dmd dystrophin involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004624762:22,306,962...24,846,427
Ensembl chrNW_004624762:22,746,729...24,847,938 		JBrowse link
G Slc8a3 solute carrier family 8 member A3 involved_in ISO (PMID:14722618) UniProt PMID:14722618 NCBI chrNW_004624734:30,889,302...31,033,098
Ensembl chrNW_004624734:30,888,952...31,031,975 		JBrowse link
regulation of skeletal muscle contraction by action potential term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Scn4a sodium voltage-gated channel alpha subunit 4 involved_in ISO (PMID:12766226) UniProt PMID:12766226 NCBI chrNW_004624849:1,436,372...1,483,531
Ensembl chrNW_004624849:1,436,047...1,483,531 		JBrowse link
regulation of skeletal muscle contraction by calcium ion signaling term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Dmpk DM1 protein kinase involved_in ISO (PMID:9294109) UniProt PMID:9294109 NCBI chrNW_004624832:7,419,529...7,429,744
Ensembl chrNW_004624832:7,419,689...7,429,084 		JBrowse link
G Rem1 RRAD and GEM like GTPase 1 acts_upstream_of_or_within ISO (PMID:26078055) MGI PMID:26078055 NCBI chrNW_004624741:997,307...1,007,267
Ensembl chrNW_004624741:997,093...1,007,273 		JBrowse link
regulation of skeletal muscle contraction by modulation of calcium ion sensitivity of myofibril term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Prkd1 protein kinase D1 ISO RGD PMID:21041300 RGD:243065274 NCBI chrNW_004624820:2,408,562...2,726,199
Ensembl chrNW_004624820:2,408,360...2,726,606 		JBrowse link
regulation of skeletal muscle contraction by regulation of release of sequestered calcium ion term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Casq1 calsequestrin 1 acts_upstream_of_or_within
involved_in		 ISO
IEA		 (PMID:17627988) MGI
TreeGrafter		 PMID:17627988 GO_REF:0000118 NCBI chrNW_004624794:1,054,119...1,064,652
Ensembl chrNW_004624794:1,050,955...1,065,287 		JBrowse link
G Dmd dystrophin involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004624762:22,306,962...24,846,427
Ensembl chrNW_004624762:22,746,729...24,847,938 		JBrowse link
G Fkbp1a FKBP prolyl isomerase 1A involved_in ISO (PMID:7592869) BHF-UCL PMID:7592869 NCBI chrNW_004624741:2,669,909...2,692,959
Ensembl chrNW_004624741:2,666,636...2,692,938 		JBrowse link
regulation of skeletal muscle contraction via regulation of action potential term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Kcnj2 potassium inwardly rectifying channel subfamily J member 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004624801:365,393...375,802
Ensembl chrNW_004624801:365,361...374,487 		JBrowse link
regulation of smooth muscle contraction term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Adra2a adrenoceptor alpha 2A involved_in IEA InterPro GO_REF:0000002 NCBI chrNW_004624737:35,262,779...35,265,566
Ensembl chrNW_004624737:35,264,099...35,265,490 		JBrowse link
G Adra2b adrenoceptor alpha 2B involved_in IEA InterPro GO_REF:0000002 NCBI chrNW_004624749:2,226,809...2,230,413
Ensembl chrNW_004624749:2,226,738...2,230,381 		JBrowse link
G Adra2c adrenoceptor alpha 2C involved_in IEA InterPro GO_REF:0000002 NCBI chrNW_004624755:24,299,985...24,301,824
Ensembl chrNW_004624755:24,300,347...24,301,693 		JBrowse link
G Adrb2 adrenoceptor beta 2 involved_in IEA InterPro GO_REF:0000002 NCBI chrNW_004624774:8,211,723...8,215,962
Ensembl chrNW_004624774:8,211,984...8,213,240 		JBrowse link
G Cav1 caveolin 1 acts_upstream_of_or_within ISO (PMID:16782699), (PMID:17098833) MGI PMID:16782699 PMID:17098833 NCBI chrNW_004624827:2,844,855...2,878,367
Ensembl chrNW_004624827:2,844,115...2,879,179 		JBrowse link
G Chrm2 cholinergic receptor muscarinic 2 involved_in ISO
IEA		 RGD
TreeGrafter		 PMID:12185001 GO_REF:0000118 RGD:724728 NCBI chrNW_004624765:17,211,162...17,342,505
Ensembl chrNW_004624765:17,333,678...17,340,421 		JBrowse link
G Chrm3 cholinergic receptor muscarinic 3 involved_in IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004624775:10,948,075...11,427,898
Ensembl chrNW_004624775:10,949,983...10,951,755 		JBrowse link
G Chrna3 cholinergic receptor nicotinic alpha 3 subunit acts_upstream_of_or_within ISO (PMID:10318955), (PMID:10771006) MGI PMID:10318955 PMID:10771006 NCBI chrNW_004624894:2,324,480...2,357,389
Ensembl chrNW_004624894:2,324,501...2,357,723 		JBrowse link
G Chrnb4 cholinergic receptor nicotinic beta 4 subunit acts_upstream_of_or_within ISO (PMID:10771006) MGI PMID:10771006 NCBI chrNW_004624894:2,305,815...2,322,264
Ensembl chrNW_004624894:2,305,820...2,322,505 		JBrowse link
G Flt1 fms related receptor tyrosine kinase 1 ISO RGD PMID:12062723 RGD:1582498 NCBI chrNW_004624776:10,043,113...10,218,598
Ensembl chrNW_004624776:10,043,258...10,219,104 		JBrowse link
G Nmu neuromedin U involved_in IEA InterPro GO_REF:0000002 NCBI chrNW_004624761:13,823,752...13,850,756
Ensembl chrNW_004624761:13,824,144...13,848,219 		JBrowse link
G Ormdl3 ORMDL sphingolipid biosynthesis regulator 3 acts_upstream_of ISO (PMID:28275141) MGI PMID:28275141 NCBI chrNW_004624795:3,210,382...3,216,130
Ensembl chrNW_004624795:3,209,605...3,217,539 		JBrowse link
G P2rx1 purinergic receptor P2X 1 acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chrNW_004624786:6,503,367...6,520,802
Ensembl chrNW_004624786:6,504,250...6,521,821 		JBrowse link
G Shc1 SHC adaptor protein 1 ISO RGD PMID:27270176 RGD:12792230 NCBI chrNW_004624885:2,511,039...2,520,883
Ensembl chrNW_004624885:2,511,240...2,521,155 		JBrowse link
G Tnni3 troponin I3, cardiac type ISO RGD PMID:16236710 RGD:1580418 NCBI chrNW_004624832:2,088,455...2,092,774
Ensembl chrNW_004624832:2,088,589...2,092,771 		JBrowse link
regulation of striated muscle contraction term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Atp2a1 ATPase sarcoplasmic/endoplasmic reticulum Ca2+ transporting 1 involved_in ISO (PMID:9405806) UniProt PMID:9405806 NCBI chrNW_004624782:12,867,404...12,883,685
Ensembl chrNW_004624782:12,867,230...12,883,685 		JBrowse link
G Mybpc3 myosin binding protein C3 involved_in ISO PMID:8799143 BHF-UCL PMID:8799143 RGD:8553425 NCBI chrNW_004624767:1,406,563...1,420,778
Ensembl chrNW_004624767:1,406,587...1,420,436 		JBrowse link
G Myl3 myosin light chain 3 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004624730:74,405,054...74,408,567
Ensembl chrNW_004624730:74,404,915...74,408,752 		JBrowse link
G Tnnt3 troponin T3, fast skeletal type involved_in ISO (PMID:17194691) RGD
UniProt		 PMID:16839517 PMID:17194691 RGD:1599483 NCBI chrNW_004624767:14,784,267...14,801,477
Ensembl chrNW_004624767:14,787,248...14,802,098 		JBrowse link
regulation of the force of skeletal muscle contraction term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Actn3 actinin alpha 3 involved_in ISO (PMID:17828264) UniProt PMID:17828264 NCBI chrNW_004624767:19,844,996...19,859,274
Ensembl chrNW_004624767:19,844,884...19,858,950 		JBrowse link
G Kbtbd13 kelch repeat and BTB domain containing 13 acts_upstream_of_or_within
involved_in		 ISO
IEA		 (PMID:31671076) MGI
TreeGrafter		 PMID:31671076 GO_REF:0000118 NCBI chrNW_004624781:7,420,012...7,425,396
Ensembl chrNW_004624781:7,418,856...7,425,396 		JBrowse link
regulation of uterine smooth muscle contraction term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Setd3 SET domain containing 3, actin N3(tau)-histidine methyltransferase involved_in ISO (PMID:30626964) UniProt PMID:30626964 NCBI chrNW_004624734:4,392,627...4,468,961
Ensembl chrNW_004624734:4,393,188...4,469,224 		JBrowse link
G Tacr1 tachykinin receptor 1 involved_in ISO (PMID:15647454) CACAO PMID:15647454 NCBI chrNW_004624749:28,243,667...28,455,012
Ensembl chrNW_004624749:28,243,640...28,455,086 		JBrowse link
G Tacr2 tachykinin receptor 2 involved_in ISO (PMID:15647454) CACAO PMID:15647454 NCBI chrNW_004624754:3,658,128...3,670,432
Ensembl chrNW_004624754:3,656,319...3,670,432 		JBrowse link
regulation of vascular associated smooth muscle contraction term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Adra2b adrenoceptor alpha 2B ISO RGD PMID:18054907 RGD:2313547 NCBI chrNW_004624749:2,226,809...2,230,413
Ensembl chrNW_004624749:2,226,738...2,230,381 		JBrowse link
G Atp2b1 ATPase plasma membrane Ca2+ transporting 1 involved_in ISO (PMID:24805951) UniProt PMID:24805951 NCBI chrNW_004624750:16,990,288...17,103,279 JBrowse link
G Map2k1 mitogen-activated protein kinase kinase 1 ISO inhibition decreases both calcium-stimulated and unstimulated myogenic tone in middle cerebral arteries (p<0.001) RGD PMID:10198244 RGD:2293329 NCBI chrNW_004624781:6,222,365...6,285,398
Ensembl chrNW_004624781:6,222,365...6,285,531 		JBrowse link
G P2rx1 purinergic receptor P2X 1 acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chrNW_004624786:6,503,367...6,520,802
Ensembl chrNW_004624786:6,504,250...6,521,821 		JBrowse link
G Zdhhc21 zDHHC palmitoyltransferase 21 involved_in ISO (PMID:26715683) UniProt PMID:26715683 NCBI chrNW_004624736:18,876,167...18,937,383
Ensembl chrNW_004624736:18,873,563...18,937,704 		JBrowse link
regulation of vein smooth muscle contraction term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Adrb2 adrenoceptor beta 2 enables ISO salbutamol, isoproterenol, clenbuterol, norepinephrine RGD PMID:6289140 RGD:2301944 NCBI chrNW_004624774:8,211,723...8,215,962
Ensembl chrNW_004624774:8,211,984...8,213,240 		JBrowse link
G Htr7 5-hydroxytryptamine receptor 7 ISO RGD PMID:31125290 RGD:14696717 NCBI chrNW_004624737:1,960,985...2,067,086
Ensembl chrNW_004624737:1,960,057...2,067,038 		JBrowse link
regulation of ventricular cardiac muscle cell action potential term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Cacna1c calcium voltage-gated channel subunit alpha1 C involved_in ISO (PMID:15454078), (PMID:26253506) BHF-UCL PMID:15454078 PMID:26253506 NCBI chrNW_004624735:10,201,030...10,927,349
Ensembl chrNW_004624735:10,201,526...10,432,896 		JBrowse link
G Cav1 caveolin 1 involved_in ISO (PMID:25017399) BHF-UCL PMID:25017399 NCBI chrNW_004624827:2,844,855...2,878,367
Ensembl chrNW_004624827:2,844,115...2,879,179 		JBrowse link
G Ctnna3 catenin alpha 3 involved_in ISO (PMID:23136403) BHF-UCL PMID:23136403 NCBI chrNW_004624754:285,469...2,182,218
Ensembl chrNW_004624754:285,857...2,034,582 		JBrowse link
G Dlg1 discs large MAGUK scaffold protein 1 involved_in ISO (PMID:25447080) BHF-UCL PMID:25447080 NCBI chrNW_004624730:62,001,547...62,223,098
Ensembl chrNW_004624730:62,002,280...62,223,319 		JBrowse link
G Dsc2 desmocollin 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004624770:1,748,561...1,778,566
Ensembl chrNW_004624770:1,748,276...1,781,117 		JBrowse link
G Dsg2 desmoglein 2 involved_in ISO (PMID:16505173), (PMID:23381804) BHF-UCL PMID:16505173 PMID:23381804 NCBI chrNW_004624770:1,315,021...1,363,472
Ensembl chrNW_004624770:1,313,916...1,364,153 		JBrowse link
G Dsp desmoplakin involved_in ISO (PMID:12373648) BHF-UCL PMID:12373648 NCBI chrNW_004624756:18,036,103...18,083,379
Ensembl chrNW_004624756:18,035,892...18,083,336 		JBrowse link
G Jup junction plakoglobin involved_in ISO (PMID:17924338) BHF-UCL PMID:17924338 NCBI chrNW_004624795:1,954,733...1,972,080
Ensembl chrNW_004624795:1,954,290...1,975,018 		JBrowse link
G Pkp2 plakophilin 2 involved_in ISO (PMID:22889254) BHF-UCL PMID:22889254 NCBI chrNW_004624778:3,261,446...3,344,204
Ensembl chrNW_004624778:3,261,390...3,342,850 		JBrowse link
G Ryr2 ryanodine receptor 2 involved_in ISO (PMID:17875969) BHF-UCL PMID:17875969 NCBI chrNW_004624775:12,954,653...13,650,449
Ensembl chrNW_004624775:12,956,042...13,419,381 		JBrowse link
G Trpm4 transient receptor potential cation channel subfamily M member 4 involved_in ISO (PMID:27207958) BHF-UCL PMID:27207958 NCBI chrNW_004624832:4,902,335...4,937,806
Ensembl chrNW_004624832:4,902,659...4,936,926 		JBrowse link
relaxation of vascular associated smooth muscle term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Adora2b adenosine A2b receptor acts_upstream_of_or_within ISO (PMID:18340377) MGI PMID:18340377 NCBI chrNW_004624877:4,421,307...4,447,574
Ensembl chrNW_004624877:4,422,022...4,447,460 		JBrowse link
G Gucy1a1 guanylate cyclase 1 soluble subunit alpha 1 acts_upstream_of_or_within ISO (PMID:16614755) MGI PMID:16614755 NCBI chrNW_004624848:2,522,935...2,588,758
Ensembl chrNW_004624848:2,525,153...2,560,025 		JBrowse link
G Irag1 inositol 1,4,5-triphosphate receptor associated 1 acts_upstream_of_or_within ISO (PMID:15483626) MGI PMID:15483626 NCBI chrNW_004624766:2,656,991...2,764,971
Ensembl chrNW_004624766:2,653,804...2,764,898 		JBrowse link
G Kcnma1 potassium calcium-activated channel subfamily M alpha 1 involved_in
acts_upstream_of_or_within		 ISO (PMID:25139746)
(PMID:15867178)		 AgBase
MGI		 PMID:15867178 PMID:25139746 NCBI chrNW_004624754:10,152,635...10,885,239
Ensembl chrNW_004624754:10,153,809...10,885,079 		JBrowse link
G Prkg1 protein kinase cGMP-dependent 1 acts_upstream_of_or_within ISO (PMID:15483626) MGI PMID:15483626 NCBI chrNW_004624791:11,334,146...12,656,480
Ensembl chrNW_004624791:11,338,510...12,654,812 		JBrowse link
G Rgs2 regulator of G protein signaling 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004624814:754,743...758,148
Ensembl chrNW_004624814:753,164...758,192 		JBrowse link
G Sod1 superoxide dismutase 1 acts_upstream_of_or_within ISO (PMID:12433839), (PMID:14679182) MGI PMID:12433839 PMID:14679182 NCBI chrNW_004624745:20,032,003...20,037,958
Ensembl chrNW_004624745:20,032,011...20,037,958 		JBrowse link
G Trpc1 transient receptor potential cation channel subfamily C member 1 involved_in ISO (PMID:25139746) AgBase PMID:25139746 NCBI chrNW_004624730:19,307,346...19,375,537 JBrowse link
G Trpv4 transient receptor potential cation channel subfamily V member 4 involved_in ISO (PMID:25139746) AgBase PMID:25139746 NCBI chrNW_004624747:10,675,625...10,685,351 JBrowse link
smooth muscle relaxation of the bladder outlet term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Bdkrb1 bradykinin receptor B1 involved_in ISO (PMID:23846981) AgBase PMID:23846981 NCBI chrNW_004624734:8,545,707...8,549,846
Ensembl chrNW_004624734:8,548,356...8,549,414 		JBrowse link
G Pgr progesterone receptor involved_in ISO (PMID:24296318) AgBase PMID:24296318 NCBI chrNW_004624878:1,714,196...1,769,302
Ensembl chrNW_004624878:1,714,559...1,762,421 		JBrowse link
Term paths to the root
Path 1
Term Annotations click to browse term
  biological_process 17650
    multicellular organismal process 7715
      system process 2857
        muscle system process 446
          muscle contraction 315
            regulation of muscle contraction 166
              negative regulation of muscle contraction + 34
              positive regulation of muscle contraction + 52
              regulation of muscle filament sliding + 4
              regulation of smooth muscle contraction + 71
              regulation of striated muscle contraction + 93
Path 2
Term Annotations click to browse term
  biological_process 17650
    biological regulation 11838
      regulation of biological process 11481
        regulation of multicellular organismal process 2979
          regulation of system process 638
            regulation of muscle system process 266
              regulation of muscle contraction 166
                negative regulation of muscle contraction + 34
                positive regulation of muscle contraction + 52
                regulation of muscle filament sliding + 4
                regulation of smooth muscle contraction + 71
                regulation of striated muscle contraction + 93
paths to the root