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ONTOLOGY REPORT - ANNOTATIONS

Term:regulation of pH
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Accession:GO:0006885 term browser browse the term
Definition:Any process involved in the maintenance of an internal equilibrium of hydrogen ions, thereby modulating the internal pH, within an organism or cell.
Synonyms:exact_synonym: hydrogen ion homeostasis

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regulation of pH term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Agtr1 angiotensin II receptor type 1 ISO RGD PMID:11906170 RGD:70819 NCBI chrNW_004936519:6,831,096...6,873,977
Ensembl chrNW_004936519:6,831,096...6,873,985 		JBrowse link
G Atp12a ATPase H+/K+ transporting non-gastric alpha2 subunit acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chrNW_004936720:2,363,933...2,378,426
Ensembl chrNW_004936720:2,363,933...2,378,426 		JBrowse link
G Atp6v0a4 ATPase H+ transporting V0 subunit a4 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936592:3,039,911...3,083,610
Ensembl chrNW_004936592:3,039,705...3,086,844 		JBrowse link
G Atp6v1b1 ATPase H+ transporting V1 subunit B1 involved_in
acts_upstream_of_or_within		 ISO
IEA		 (PMID:17898041)
(PMID:12414817)		 UniProt
Ensembl
HGNC-UCL		 PMID:12414817 PMID:17898041 GO_REF:0000107 NCBI chrNW_004936491:15,112,422...15,138,716
Ensembl chrNW_004936491:15,112,321...15,139,525 		JBrowse link
G Edn1 endothelin 1 acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chrNW_004936534:885,489...892,292
Ensembl chrNW_004936534:885,287...891,772 		JBrowse link
G Ednrb endothelin receptor type B acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chrNW_004936511:3,446,864...3,478,434
Ensembl chrNW_004936511:3,446,839...3,478,434 		JBrowse link
G Kcnj16 potassium inwardly rectifying channel subfamily J member 16 ISO RGD PMID:30605394 RGD:38500203 NCBI chrNW_004936655:3,487,071...3,489,686
Ensembl chrNW_004936655:3,488,338...3,489,597 		JBrowse link
G Pdk2 pyruvate dehydrogenase kinase 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936490:11,534,412...11,549,128
Ensembl chrNW_004936490:11,534,243...11,549,642 		JBrowse link
G Pdk4 pyruvate dehydrogenase kinase 4 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936585:4,701,012...4,713,421
Ensembl chrNW_004936585:4,700,418...4,714,450 		JBrowse link
G Rhcg Rh family C glycoprotein involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936483:15,329,147...15,353,301
Ensembl chrNW_004936483:15,328,364...15,353,404 		JBrowse link
G Rogdi rogdi atypical leucine zipper acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chrNW_004936530:4,756,069...4,761,484
Ensembl chrNW_004936530:4,753,751...4,761,695 		JBrowse link
G Slc26a4 solute carrier family 26 member 4 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936479:16,435,779...16,483,139
Ensembl chrNW_004936479:16,435,739...16,481,332 		JBrowse link
G Slc26a9 solute carrier family 26 member 9 acts_upstream_of_or_within ISO (PMID:15800055) MGI PMID:15800055 NCBI chrNW_004936557:6,562,125...6,588,200
Ensembl chrNW_004936557:6,562,109...6,588,502 		JBrowse link
G Slc4a10 solute carrier family 4 member 10 acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chrNW_004936469:17,068,179...17,349,563
Ensembl chrNW_004936469:17,068,175...17,349,782 		JBrowse link
G Slc9a1 solute carrier family 9 member A1 involved_in
acts_upstream_of_or_within		 IEA InterPro
Ensembl		 GO_REF:0000002 GO_REF:0000107 NCBI chrNW_004936474:11,460,266...11,517,420
Ensembl chrNW_004936474:11,459,929...11,517,478 		JBrowse link
G Slc9a2 solute carrier family 9 member A2 involved_in
acts_upstream_of_or_within		 IEA InterPro
Ensembl		 GO_REF:0000002 GO_REF:0000107 NCBI chrNW_004936713:1,256,678...1,340,338
Ensembl chrNW_004936713:1,256,692...1,342,229 		JBrowse link
G Slc9a3 solute carrier family 9 member A3 acts_upstream_of_or_within
involved_in		 ISO
IEA		 (PMID:10666043) RGD
MGI
InterPro		 PMID:10666043 PMID:15265811 GO_REF:0000002 RGD:1625070 NCBI chrNW_004936815:963,715...999,280
Ensembl chrNW_004936815:963,715...999,280 		JBrowse link
G Slc9a4 solute carrier family 9 member A4 involved_in IEA InterPro GO_REF:0000002 NCBI chrNW_004936713:1,134,059...1,186,145
Ensembl chrNW_004936713:1,134,059...1,186,145 		JBrowse link
G Slc9a5 solute carrier family 9 member A5 involved_in IEA InterPro GO_REF:0000002 NCBI chrNW_004936475:17,711,025...17,732,696
Ensembl chrNW_004936475:17,711,442...17,732,658 		JBrowse link
G Slc9a6 solute carrier family 9 member A6 involved_in IEA InterPro GO_REF:0000002 NCBI chrNW_004936513:11,158,609...11,215,477
Ensembl chrNW_004936513:11,158,730...11,215,568 		JBrowse link
G Slc9a7 solute carrier family 9 member A7 involved_in IEA InterPro GO_REF:0000002 NCBI chrNW_004936502:12,450,702...12,587,196
Ensembl chrNW_004936502:12,452,720...12,587,192 		JBrowse link
G Slc9a8 solute carrier family 9 member A8 involved_in IEA InterPro GO_REF:0000002 NCBI chrNW_004936514:4,518,798...4,595,003
Ensembl chrNW_004936514:4,517,483...4,595,019 		JBrowse link
G Slc9a9 solute carrier family 9 member A9 involved_in IEA InterPro GO_REF:0000002 NCBI chrNW_004936540:4,843,798...5,384,305
Ensembl chrNW_004936540:4,845,212...5,384,170 		JBrowse link
G Wdr72 WD repeat domain 72 acts_upstream_of_or_within ISO (PMID:35181734) MGI PMID:35181734 NCBI chrNW_004936471:15,233,828...15,416,415
Ensembl chrNW_004936471:15,233,840...15,416,415 		JBrowse link
endosomal lumen acidification term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Aqp11 aquaporin 11 acts_upstream_of_or_within ISO (PMID:16107722) MGI PMID:16107722 NCBI chrNW_004936498:6,213,583...6,237,273 JBrowse link
G Faslg Fas ligand ISO RGD PMID:18045865 RGD:2315735 NCBI chrNW_004936481:14,789,547...14,795,780 JBrowse link
G Rnasek ribonuclease K involved_in ISO (PMID:26212330) UniProt PMID:26212330 NCBI chrNW_004936595:284,313...286,167
Ensembl chrNW_004936595:284,151...286,167 		JBrowse link
G Tmem9 transmembrane protein 9 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936567:3,232,628...3,250,596
Ensembl chrNW_004936567:3,225,511...3,250,684 		JBrowse link
intracellular pH elevation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Cftr CF transmembrane conductance regulator involved_in ISO (PMID:21976599) UniProt PMID:21976599 NCBI chrNW_004936589:1,565,933...1,719,208 JBrowse link
G Slc26a3 solute carrier family 26 member 3 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936479:16,350,746...16,374,911
Ensembl chrNW_004936479:16,350,773...16,377,367 		JBrowse link
G Slc26a6 solute carrier family 26 member 6 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936529:425,839...435,590
Ensembl chrNW_004936529:424,720...435,293 		JBrowse link
intracellular pH reduction term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Gpr89a G protein-coupled receptor 89A involved_in IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004936867:388,801...426,135 JBrowse link
G Slc12a5 solute carrier family 12 member 5 ISO RGD PMID:16420452 RGD:2303953 NCBI chrNW_004936514:6,999,793...7,027,094
Ensembl chrNW_004936514:6,998,044...7,026,767 		JBrowse link
G Tcirg1 T cell immune regulator 1, ATPase H+ transporting V0 subunit a3 acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chrNW_004936599:2,070,211...2,079,169
Ensembl chrNW_004936599:2,066,847...2,079,206 		JBrowse link
G Tpcn2 two pore segment channel 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936599:1,301,937...1,343,046
Ensembl chrNW_004936599:1,318,169...1,343,106 		JBrowse link
G Ttpa alpha tocopherol transfer protein ISO RGD PMID:22147702 RGD:7247589 NCBI chrNW_004936496:10,409,948...10,466,722
Ensembl chrNW_004936496:10,454,605...10,465,301 		JBrowse link
lysosomal lumen acidification term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Atp6ap2 ATPase H+ transporting accessory protein 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936502:7,206,226...7,232,798
Ensembl chrNW_004936502:7,206,172...7,233,912 		JBrowse link
G Cln3 CLN3 lysosomal/endosomal transmembrane protein, battenin involved_in IEA TreeGrafter
Ensembl		 GO_REF:0000107 GO_REF:0000118 NCBI chrNW_004936501:11,955,334...11,967,338
Ensembl chrNW_004936501:11,955,184...11,967,436 		JBrowse link
G Cln5 CLN5 intracellular trafficking protein involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936511:4,283,016...4,291,968
Ensembl chrNW_004936511:4,283,009...4,292,376 		JBrowse link
G Cln6 CLN6 transmembrane ER protein involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936471:28,069,058...28,084,607
Ensembl chrNW_004936471:28,070,462...28,084,648 		JBrowse link
G Creg1 cellular repressor of E1A stimulated genes 1 acts_upstream_of_or_within ISO (PMID:33966596) MGI PMID:33966596 NCBI chrNW_004936481:18,523,022...18,531,227 JBrowse link
G Grn granulin precursor involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936541:793,548...800,271
Ensembl chrNW_004936541:793,523...800,217 		JBrowse link
G Lamp1 lysosomal associated membrane protein 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936472:377,359...389,121
Ensembl chrNW_004936472:378,173...389,381 		JBrowse link
G Lamp2 lysosomal associated membrane protein 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936479:9,584,221...9,622,330
Ensembl chrNW_004936479:9,584,221...9,610,420 		JBrowse link
G Ppt1 palmitoyl-protein thioesterase 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936474:21,881,692...21,906,564
Ensembl chrNW_004936474:21,881,712...21,906,569 		JBrowse link
G Snapin SNAP associated protein acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chrNW_004936580:3,449,585...3,464,709
Ensembl chrNW_004936580:3,462,987...3,464,214 		JBrowse link
G Tmem106b transmembrane protein 106B acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chrNW_004936761:1,663,099...1,689,580
Ensembl chrNW_004936761:1,662,738...1,685,156 		JBrowse link
G Tmem9 transmembrane protein 9 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936567:3,232,628...3,250,596
Ensembl chrNW_004936567:3,225,511...3,250,684 		JBrowse link
G Vma12 vacuolar ATPase assembly factor VMA12 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936538:4,512,866...4,517,404
Ensembl chrNW_004936538:4,511,941...4,517,498 		JBrowse link
G Vma22 vacuolar ATPase assembly factor VMA22 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936469:41,083,713...41,087,106
Ensembl chrNW_004936469:41,083,738...41,087,087 		JBrowse link
lysosomal lumen pH elevation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Cln3 CLN3 lysosomal/endosomal transmembrane protein, battenin involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936501:11,955,334...11,967,338
Ensembl chrNW_004936501:11,955,184...11,967,436 		JBrowse link
G Oca2 OCA2 melanosomal transmembrane protein involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936471:38,612,450...38,952,150
Ensembl chrNW_004936471:38,612,427...38,952,199 		JBrowse link
G Slc45a2 solute carrier family 45 member 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936518:7,094,949...7,139,961
Ensembl chrNW_004936518:7,095,038...7,137,277 		JBrowse link
G Tmem175 transmembrane protein 175 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936477:22,239,093...22,254,028
Ensembl chrNW_004936477:22,239,093...22,254,439 		JBrowse link
negative regulation of cellular pH reduction term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Bcl2 BCL2 apoptosis regulator involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936497:2,209,136...2,373,580
Ensembl chrNW_004936497:2,210,334...2,210,921 		JBrowse link
pH elevation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Slc4a1 solute carrier family 4 member 1 (Diego blood group) acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chrNW_004936541:718,577...727,420
Ensembl chrNW_004936541:718,577...729,876 		JBrowse link
pH reduction term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Atp4a ATPase H+/K+ transporting subunit alpha acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chrNW_004936570:802,170...815,023
Ensembl chrNW_004936570:802,170...814,056 		JBrowse link
G Atp4b ATPase H+/K+ transporting subunit beta ISO RGD PMID:19064992 RGD:14696784 NCBI chrNW_004936472:168,745...173,996
Ensembl chrNW_004936472:168,750...173,968 		JBrowse link
G Atp6v1b1 ATPase H+ transporting V1 subunit B1 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936491:15,112,422...15,138,716
Ensembl chrNW_004936491:15,112,321...15,139,525 		JBrowse link
G Cckbr cholecystokinin B receptor acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chrNW_004936842:329,551...341,491
Ensembl chrNW_004936842:329,376...341,808 		JBrowse link
G Rogdi rogdi atypical leucine zipper acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chrNW_004936530:4,756,069...4,761,484
Ensembl chrNW_004936530:4,753,751...4,761,695 		JBrowse link
G Slc4a3 solute carrier family 4 member 3 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936569:1,992,850...2,005,770
Ensembl chrNW_004936569:1,992,814...2,008,800 		JBrowse link
G Tcirg1 T cell immune regulator 1, ATPase H+ transporting V0 subunit a3 acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chrNW_004936599:2,070,211...2,079,169
Ensembl chrNW_004936599:2,066,847...2,079,206 		JBrowse link
phagosome acidification term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Rab20 RAB20, member RAS oncogene family involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936472:2,234,826...2,264,613
Ensembl chrNW_004936472:2,234,873...2,264,622 		JBrowse link
G Rab38 RAB38, member RAS oncogene family involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936736:1,304,290...1,360,412
Ensembl chrNW_004936736:1,304,185...1,361,221 		JBrowse link
G Rab39a RAB39A, member RAS oncogene family involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936551:750,940...778,432
Ensembl chrNW_004936551:746,936...778,432 		JBrowse link
G Rab7a RAB7A, member RAS oncogene family involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936798:297,600...304,929
Ensembl chrNW_004936798:296,066...305,176 		JBrowse link
G Slamf8 SLAM family member 8 acts_upstream_of_or_within ISO (PMID:22593622) MGI PMID:22593622 NCBI chrNW_004936740:776,557...786,182
Ensembl chrNW_004936740:776,455...786,357 		JBrowse link
G Slc4a7 solute carrier family 4 member 7 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936473:18,550,489...18,645,470
Ensembl chrNW_004936473:18,550,484...18,645,628 		JBrowse link
G Tcirg1 T cell immune regulator 1, ATPase H+ transporting V0 subunit a3 acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chrNW_004936599:2,070,211...2,079,169
Ensembl chrNW_004936599:2,066,847...2,079,206 		JBrowse link
positive regulation of cellular pH reduction term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Avpr1a arginine vasopressin receptor 1A ISO RGD PMID:17762181 RGD:2300343 NCBI chrNW_004936545:1,788,995...1,795,842
Ensembl chrNW_004936545:1,786,571...1,794,709 		JBrowse link
G Avpr1b arginine vasopressin receptor 1B ISO RGD PMID:17762181 RGD:2300343 NCBI chrNW_004936557:6,415,544...6,423,863
Ensembl chrNW_004936557:6,415,547...6,424,711 		JBrowse link
G Ca2 carbonic anhydrase 2 acts_upstream_of_or_within ISO
IEA		 RGD
Ensembl		 PMID:9665810 GO_REF:0000107 RGD:1342423 NCBI chrNW_004936544:362,591...379,151
Ensembl chrNW_004936544:362,591...380,223 		JBrowse link
G Ca7 carbonic anhydrase 7 acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chrNW_004936475:17,112,004...17,120,105
Ensembl chrNW_004936475:17,112,004...17,120,105 		JBrowse link
positive regulation of Golgi lumen acidification term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ube3a ubiquitin protein ligase E3A involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936471:41,187,665...41,290,345
Ensembl chrNW_004936471:41,187,612...41,283,517 		JBrowse link
regulation of cellular pH term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Atp6ap1 ATPase H+ transporting accessory protein 1 involved_in IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004936809:1,179,507...1,188,172
Ensembl chrNW_004936809:1,179,464...1,188,283 		JBrowse link
G Atp6ap1l ATPase H+ transporting accessory protein 1 like involved_in IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004936469:1,539,985...1,562,286 JBrowse link
G Gpr39 G protein-coupled receptor 39 acts_upstream_of_or_within ISO (PMID:26375174) MGI PMID:26375174 NCBI chrNW_004936469:55,973,001...55,974,070
Ensembl chrNW_004936469:55,972,948...56,169,227 		JBrowse link
G LOC101966280 sodium/potassium-transporting ATPase subunit alpha-4 involved_in ISO
IEA		 RGD
Ensembl		 PMID:12112599 GO_REF:0000107 RGD:728364 NCBI chrNW_004936740:445,952...478,580
Ensembl chrNW_004936740:445,952...478,532 		JBrowse link
G LOC101974441 purine nucleoside phosphorylase LACC1 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936791:80,245...91,172
Ensembl chrNW_004936791:80,245...93,951 		JBrowse link
G Mafg MAF bZIP transcription factor G ISO RGD PMID:11583919 RGD:633304 NCBI chrNW_004936594:5,425,117...5,430,057
Ensembl chrNW_004936594:5,424,940...5,430,097 		JBrowse link
G Mapk1 mitogen-activated protein kinase 1 acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chrNW_004936619:1,889,841...1,932,646
Ensembl chrNW_004936619:1,889,708...1,932,646 		JBrowse link
G Mapk3 mitogen-activated protein kinase 3 acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chrNW_004936501:12,342,670...12,390,650
Ensembl chrNW_004936501:12,384,804...12,392,180 		JBrowse link
G Slc4a10 solute carrier family 4 member 10 acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chrNW_004936469:17,068,179...17,349,563
Ensembl chrNW_004936469:17,068,175...17,349,782 		JBrowse link
regulation of Golgi lumen acidification term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Slc9a7 solute carrier family 9 member A7 involved_in ISO (PMID:30335141) UniProt PMID:30335141 NCBI chrNW_004936502:12,450,702...12,587,196
Ensembl chrNW_004936502:12,452,720...12,587,192 		JBrowse link
G Slc9a8 solute carrier family 9 member A8 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936514:4,518,798...4,595,003
Ensembl chrNW_004936514:4,517,483...4,595,019 		JBrowse link
regulation of intracellular pH term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Atp5f1b ATP synthase F1 subunit beta involved_in ISO (PMID:17510399) UniProt PMID:17510399 NCBI chrNW_004936646:951,236...958,907
Ensembl chrNW_004936646:951,009...959,516 		JBrowse link
G Ca2 carbonic anhydrase 2 involved_in IEA TreeGrafter
Ensembl		 GO_REF:0000107 GO_REF:0000118 NCBI chrNW_004936544:362,591...379,151
Ensembl chrNW_004936544:362,591...380,223 		JBrowse link
G Ca7 carbonic anhydrase 7 involved_in IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004936475:17,112,004...17,120,105
Ensembl chrNW_004936475:17,112,004...17,120,105 		JBrowse link
G Chp1 calcineurin like EF-hand protein 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936471:4,611,980...4,660,320
Ensembl chrNW_004936471:4,611,252...4,660,359 		JBrowse link
G Cln3 CLN3 lysosomal/endosomal transmembrane protein, battenin involved_in IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004936501:11,955,334...11,967,338
Ensembl chrNW_004936501:11,955,184...11,967,436 		JBrowse link
G Hvcn1 hydrogen voltage gated channel 1 involved_in ISO
IEA		 RGD
Ensembl		 PMID:24935944 GO_REF:0000107 RGD:14985214 NCBI chrNW_004936558:3,581,409...3,609,714
Ensembl chrNW_004936558:3,579,341...3,609,789 		JBrowse link
G Slc26a6 solute carrier family 26 member 6 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936529:425,839...435,590
Ensembl chrNW_004936529:424,720...435,293 		JBrowse link
G Slc4a1 solute carrier family 4 member 1 (Diego blood group) involved_in IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004936541:718,577...727,420
Ensembl chrNW_004936541:718,577...729,876 		JBrowse link
G Slc4a10 solute carrier family 4 member 10 involved_in IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004936469:17,068,179...17,349,563
Ensembl chrNW_004936469:17,068,175...17,349,782 		JBrowse link
G Slc4a2 solute carrier family 4 member 2 involved_in ISO
IEA		 RGD
TreeGrafter		 PMID:16440368 GO_REF:0000118 RGD:9999231 NCBI chrNW_004936527:6,485,566...6,499,901
Ensembl chrNW_004936527:6,485,511...6,499,924 		JBrowse link
G Slc4a3 solute carrier family 4 member 3 involved_in
acts_upstream_of_or_within		 IEA TreeGrafter
Ensembl		 GO_REF:0000107 GO_REF:0000118 NCBI chrNW_004936569:1,992,850...2,005,770
Ensembl chrNW_004936569:1,992,814...2,008,800 		JBrowse link
G Slc4a4 solute carrier family 4 member 4 acts_upstream_of
involved_in		 IEA Ensembl
TreeGrafter		 GO_REF:0000107 GO_REF:0000118 NCBI chrNW_004936598:3,391,587...3,713,629
Ensembl chrNW_004936598:3,391,575...3,713,635 		JBrowse link
G Slc4a5 solute carrier family 4 member 5 involved_in IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004936556:475,856...577,160
Ensembl chrNW_004936556:475,394...577,168 		JBrowse link
G Slc4a7 solute carrier family 4 member 7 involved_in IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004936473:18,550,489...18,645,470
Ensembl chrNW_004936473:18,550,484...18,645,628 		JBrowse link
G Slc4a8 solute carrier family 4 member 8 involved_in
acts_upstream_of_or_within		 IEA TreeGrafter
Ensembl		 GO_REF:0000107 GO_REF:0000118 NCBI chrNW_004936512:8,988,212...9,060,287
Ensembl chrNW_004936512:8,988,390...9,054,997 		JBrowse link
G Slc4a9 solute carrier family 4 member 9 involved_in IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004936531:9,354,954...9,368,603
Ensembl chrNW_004936531:9,354,954...9,366,718 		JBrowse link
G Slc9a1 solute carrier family 9 member A1 involved_in ISO
IEA		 RGD
TreeGrafter
Ensembl		 PMID:22387884 GO_REF:0000107 GO_REF:0000118 RGD:6771326 NCBI chrNW_004936474:11,460,266...11,517,420
Ensembl chrNW_004936474:11,459,929...11,517,478 		JBrowse link
G Slc9a2 solute carrier family 9 member A2 involved_in IEA TreeGrafter
Ensembl		 GO_REF:0000107 GO_REF:0000118 NCBI chrNW_004936713:1,256,678...1,340,338
Ensembl chrNW_004936713:1,256,692...1,342,229 		JBrowse link
G Slc9a3 solute carrier family 9 member A3 involved_in IEA TreeGrafter
Ensembl		 GO_REF:0000107 GO_REF:0000118 NCBI chrNW_004936815:963,715...999,280
Ensembl chrNW_004936815:963,715...999,280 		JBrowse link
G Slc9a4 solute carrier family 9 member A4 involved_in IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004936713:1,134,059...1,186,145
Ensembl chrNW_004936713:1,134,059...1,186,145 		JBrowse link
G Slc9a5 solute carrier family 9 member A5 involved_in IEA Ensembl
TreeGrafter		 GO_REF:0000107 GO_REF:0000118 NCBI chrNW_004936475:17,711,025...17,732,696
Ensembl chrNW_004936475:17,711,442...17,732,658 		JBrowse link
G Slc9a6 solute carrier family 9 member A6 involved_in IEA TreeGrafter
Ensembl		 GO_REF:0000107 GO_REF:0000118 NCBI chrNW_004936513:11,158,609...11,215,477
Ensembl chrNW_004936513:11,158,730...11,215,568 		JBrowse link
G Slc9a7 solute carrier family 9 member A7 involved_in IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004936502:12,450,702...12,587,196
Ensembl chrNW_004936502:12,452,720...12,587,192 		JBrowse link
G Slc9a8 solute carrier family 9 member A8 involved_in IEA TreeGrafter
Ensembl		 GO_REF:0000107 GO_REF:0000118 NCBI chrNW_004936514:4,518,798...4,595,003
Ensembl chrNW_004936514:4,517,483...4,595,019 		JBrowse link
G Slc9a9 solute carrier family 9 member A9 involved_in IEA Ensembl
TreeGrafter		 GO_REF:0000107 GO_REF:0000118 NCBI chrNW_004936540:4,843,798...5,384,305
Ensembl chrNW_004936540:4,845,212...5,384,170 		JBrowse link
G Slc9b1 solute carrier family 9 member B1 involved_in ISO (PMID:20036903) UniProt PMID:20036903 NCBI chrNW_004936520:405,239...466,280
Ensembl chrNW_004936520:411,811...466,280 		JBrowse link
G Slc9c1 solute carrier family 9 member C1 involved_in IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004936834:939,319...1,004,163
Ensembl chrNW_004936834:942,457...1,004,226 		JBrowse link
G Tm9sf4 transmembrane 9 superfamily member 4 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936485:19,029,181...19,079,468
Ensembl chrNW_004936485:19,029,073...19,080,830 		JBrowse link
G Tp53 tumor protein p53 ISO RGD PMID:16688778 RGD:1598619 NCBI chrNW_004936595:919,807...935,367
Ensembl chrNW_004936595:919,428...925,425 		JBrowse link
regulation of lysosomal lumen pH term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Lrrk2 leucine rich repeat kinase 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936607:628,469...761,117
Ensembl chrNW_004936607:626,991...761,123 		JBrowse link
G Spns1 SPNS lysolipid transporter 1, lysophospholipid acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chrNW_004936501:11,765,236...11,772,403
Ensembl chrNW_004936501:11,764,295...11,772,409 		JBrowse link
G Tasl TLR adaptor interacting with endolysosomal SLC15A4 involved_in IEA TreeGrafter
Ensembl		 GO_REF:0000107 GO_REF:0000118 NCBI chrNW_004936553:6,628,131...6,629,027
Ensembl chrNW_004936553:6,628,131...6,629,027 		JBrowse link
G Tmem165 transmembrane protein 165 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936482:17,760,532...17,785,466
Ensembl chrNW_004936482:17,760,384...17,785,587 		JBrowse link
G Tmem175 transmembrane protein 175 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936477:22,239,093...22,254,028
Ensembl chrNW_004936477:22,239,093...22,254,439 		JBrowse link
G Vps33a VPS33A core subunit of CORVET and HOPS complexes involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936558:2,227,305...2,257,725
Ensembl chrNW_004936558:2,227,253...2,257,722 		JBrowse link
vacuolar acidification term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Atp6v0a1 ATPase H+ transporting V0 subunit a1 involved_in IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004936490:17,235,661...17,296,589
Ensembl chrNW_004936490:17,235,661...17,296,633 		JBrowse link
G Atp6v0a2 ATPase H+ transporting V0 subunit a2 involved_in IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004936558:1,104,627...1,138,487
Ensembl chrNW_004936558:1,103,135...1,134,573 		JBrowse link
G Atp6v0a4 ATPase H+ transporting V0 subunit a4 involved_in IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004936592:3,039,911...3,083,610
Ensembl chrNW_004936592:3,039,705...3,086,844 		JBrowse link
G Atp6v1b1 ATPase H+ transporting V1 subunit B1 involved_in IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004936491:15,112,422...15,138,716
Ensembl chrNW_004936491:15,112,321...15,139,525 		JBrowse link
G Atp6v1b2 ATPase H+ transporting V1 subunit B2 involved_in IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004936555:4,285,269...4,307,715
Ensembl chrNW_004936555:4,285,269...4,310,858 		JBrowse link
G Clic4 chloride intracellular channel 4 acts_upstream_of_or_within ISO (PMID:19197003) MGI PMID:19197003 NCBI chrNW_004936474:9,664,872...9,711,036 JBrowse link
G Dmxl1 Dmx like 1 involved_in IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004936715:2,013,745...2,177,418
Ensembl chrNW_004936715:2,013,722...2,179,224 		JBrowse link
G Dmxl2 Dmx like 2 involved_in IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004936471:13,330,870...13,483,610
Ensembl chrNW_004936471:13,329,622...13,483,937 		JBrowse link
G Slc11a1 solute carrier family 11 member 1 acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chrNW_004936569:888,309...895,991
Ensembl chrNW_004936569:887,742...895,977 		JBrowse link
G Tcirg1 T cell immune regulator 1, ATPase H+ transporting V0 subunit a3 involved_in IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004936599:2,070,211...2,079,169
Ensembl chrNW_004936599:2,066,847...2,079,206 		JBrowse link
Term paths to the root
Path 1
Term Annotations click to browse term
  biological_process 17417
    biological regulation 11394
      regulation of pH 101
        pH elevation 1
        pH reduction 7
        regulation of cellular pH + 86
Path 2
Term Annotations click to browse term
  biological_process 17417
    homeostatic process 1851
      chemical homeostasis 1126
        monoatomic ion homeostasis 629
          monoatomic cation homeostasis 615
            regulation of pH 101
              pH elevation 1
              pH reduction 7
              regulation of cellular pH + 86
paths to the root