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ONTOLOGY REPORT - ANNOTATIONS

Term:regulation of pH
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Accession:GO:0006885 term browser browse the term
Definition:Any process involved in the maintenance of an internal equilibrium of hydrogen ions, thereby modulating the internal pH, within an organism or cell.
Synonyms:exact_synonym: hydrogen ion homeostasis

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regulation of pH term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Agtr1 angiotensin II receptor type 1 ISO RGD PMID:11906170 RGD:70819 NCBI chrNW_004624730:25,964,848...26,006,468
Ensembl chrNW_004624730:25,964,811...26,006,463 		JBrowse link
G Atp12a ATPase H+/K+ transporting non-gastric alpha2 subunit acts_upstream_of_or_within ISO (PMID:16525125) MGI PMID:16525125 NCBI chrNW_004624776:18,466,952...18,495,693
Ensembl chrNW_004624776:18,467,967...18,495,651 		JBrowse link
G Atp6v0a4 ATPase H+ transporting V0 subunit a4 involved_in ISO (PMID:10973252) HGNC-UCL PMID:10973252 NCBI chrNW_004624765:19,149,353...19,219,242
Ensembl chrNW_004624765:19,149,589...19,194,158 		JBrowse link
G Atp6v1b1 ATPase H+ transporting V1 subunit B1 acts_upstream_of_or_within
involved_in		 ISO (PMID:9916796)
(PMID:17898041)
(PMID:16174750)
(PMID:12414817)		 MGI
UniProt
HGNC-UCL		 PMID:9916796 PMID:12414817 PMID:16174750 PMID:17898041 NCBI chrNW_004624762:2,445,840...2,480,377
Ensembl chrNW_004624762:2,443,765...2,480,464 		JBrowse link
G Edn1 endothelin 1 acts_upstream_of_or_within ISO (PMID:11413164) MGI PMID:11413164 NCBI chrNW_004624756:13,842,482...13,849,003
Ensembl chrNW_004624756:13,842,164...13,849,029 		JBrowse link
G Ednrb endothelin receptor type B acts_upstream_of_or_within ISO (PMID:11413164) MGI PMID:11413164 NCBI chrNW_004624751:22,459,613...22,491,409
Ensembl chrNW_004624751:22,459,584...22,491,606 		JBrowse link
G Kcnj16 potassium inwardly rectifying channel subfamily J member 16 ISO RGD PMID:30605394 RGD:38500203 NCBI chrNW_004624801:269,449...335,535
Ensembl chrNW_004624801:269,533...335,535 		JBrowse link
G Pdk2 pyruvate dehydrogenase kinase 2 involved_in ISO (PMID:22360721) UniProt PMID:22360721 NCBI chrNW_004624795:6,096,164...6,107,271
Ensembl chrNW_004624795:6,095,948...6,107,271 		JBrowse link
G Pdk4 pyruvate dehydrogenase kinase 4 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004624813:2,258,279...2,270,540
Ensembl chrNW_004624813:2,258,279...2,270,824 		JBrowse link
G Rhcg Rh family C glycoprotein involved_in ISO (PMID:19020613) UniProt PMID:19020613 NCBI chrNW_004624768:16,623,667...16,644,149
Ensembl chrNW_004624768:16,623,599...16,644,189 		JBrowse link
G Rogdi rogdi atypical leucine zipper acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chrNW_004624824:2,649,694...2,655,728
Ensembl chrNW_004624824:2,650,116...2,655,716 		JBrowse link
G Slc26a4 solute carrier family 26 member 4 involved_in ISO (PMID:16144965) UniProt PMID:16144965 NCBI chrNW_004624739:22,047,771...22,100,130
Ensembl chrNW_004624739:22,047,704...22,100,154 		JBrowse link
G Slc26a9 solute carrier family 26 member 9 acts_upstream_of_or_within ISO (PMID:15800055) MGI PMID:15800055 NCBI chrNW_004624807:5,364,708...5,385,832
Ensembl chrNW_004624807:5,366,820...5,386,150 		JBrowse link
G Slc4a10 solute carrier family 4 member 10 acts_upstream_of_or_within ISO (PMID:10993873) MGI PMID:10993873 NCBI chrNW_004624732:3,541,525...3,849,805
Ensembl chrNW_004624732:3,540,954...3,849,863 		JBrowse link
G Slc9a1 solute carrier family 9 member A1 involved_in
acts_upstream_of_or_within		 IEA InterPro
Ensembl		 GO_REF:0000002 GO_REF:0000107 NCBI chrNW_004624764:11,041,118...11,095,892
Ensembl chrNW_004624764:11,039,051...11,095,885 		JBrowse link
G Slc9a2 solute carrier family 9 member A2 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:10666043) InterPro
MGI		 PMID:10666043 GO_REF:0000002 NCBI chrNW_004624749:7,100,585...7,188,744
Ensembl chrNW_004624749:7,100,607...7,189,494 		JBrowse link
G Slc9a3 solute carrier family 9 member A3 acts_upstream_of_or_within
involved_in		 ISO
IEA		 (PMID:10666043) RGD
MGI
InterPro		 PMID:10666043 PMID:15265811 GO_REF:0000002 RGD:1625070 NCBI chrNW_004624751:254,373...290,218
Ensembl chrNW_004624751:256,305...291,178 		JBrowse link
G Slc9a4 solute carrier family 9 member A4 involved_in IEA InterPro GO_REF:0000002 NCBI chrNW_004624749:6,972,364...7,025,929
Ensembl chrNW_004624749:6,972,904...7,024,665 		JBrowse link
G Slc9a5 solute carrier family 9 member A5 involved_in IEA InterPro GO_REF:0000002 NCBI chrNW_004624746:19,051,508...19,074,103
Ensembl chrNW_004624746:19,051,515...19,074,076 		JBrowse link
G Slc9a6 solute carrier family 9 member A6 involved_in IEA InterPro GO_REF:0000002 NCBI chrNW_004624808:11,107,125...11,157,913 JBrowse link
G Slc9a7 solute carrier family 9 member A7 involved_in IEA InterPro GO_REF:0000002 NCBI chrNW_004624887:3,403,764...3,563,699
Ensembl chrNW_004624887:3,408,109...3,563,639 		JBrowse link
G Slc9a8 solute carrier family 9 member A8 involved_in IEA InterPro GO_REF:0000002 NCBI chrNW_004624790:5,580,655...5,644,396
Ensembl chrNW_004624790:5,582,176...5,645,091 		JBrowse link
G Slc9a9 solute carrier family 9 member A9 involved_in IEA InterPro GO_REF:0000002 NCBI chrNW_004624730:19,902,504...20,514,138
Ensembl chrNW_004624730:19,902,620...20,514,160 		JBrowse link
G Wdr72 WD repeat domain 72 acts_upstream_of_or_within ISO (PMID:35181734) MGI PMID:35181734 NCBI chrNW_004624731:7,186,570...7,365,900
Ensembl chrNW_004624731:7,205,335...7,367,112 		JBrowse link
endosomal lumen acidification term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Aqp11 aquaporin 11 acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chrNW_004624863:679,049...694,765
Ensembl chrNW_004624863:678,953...694,505 		JBrowse link
G Faslg Fas ligand ISO RGD PMID:18045865 RGD:2315735 NCBI chrNW_004624771:9,031,978...9,038,760
Ensembl chrNW_004624771:9,032,016...9,038,825 		JBrowse link
G Rnasek ribonuclease K involved_in ISO (PMID:26212330) UniProt PMID:26212330 NCBI chrNW_004624786:9,556,891...9,558,946
Ensembl chrNW_004624786:9,556,874...9,558,946 		JBrowse link
G Tmem9 transmembrane protein 9 involved_in ISO (PMID:30374053) UniProt PMID:30374053 NCBI chrNW_004624807:9,525,770...9,544,757
Ensembl chrNW_004624807:9,525,855...9,544,757 		JBrowse link
intracellular pH elevation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Cftr CF transmembrane conductance regulator involved_in ISO (PMID:21976599) UniProt PMID:21976599 NCBI chrNW_004624827:1,704,733...1,893,579 JBrowse link
G Slc26a3 solute carrier family 26 member 3 involved_in ISO (PMID:21976599) UniProt PMID:21976599 NCBI chrNW_004624739:21,979,164...22,004,794
Ensembl chrNW_004624739:21,979,172...22,004,716 		JBrowse link
G Slc26a6 solute carrier family 26 member 6 involved_in ISO (PMID:21976599) UniProt PMID:21976599 NCBI chrNW_004624730:2,639,940...2,649,358
Ensembl chrNW_004624730:2,640,208...2,649,203 		JBrowse link
intracellular pH reduction term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G LOC101697635 Golgi pH regulator involved_in IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004624772:16,978,874...17,023,301
Ensembl chrNW_004624772:16,978,897...17,023,802 		JBrowse link
G Slc12a5 solute carrier family 12 member 5 ISO RGD PMID:16420452 RGD:2303953 NCBI chrNW_004624790:8,539,103...8,576,877
Ensembl chrNW_004624790:8,537,185...8,576,861 		JBrowse link
G Tcirg1 T cell immune regulator 1, ATPase H+ transporting V0 subunit a3 acts_upstream_of_or_within ISO (PMID:23908015) MGI PMID:23908015 NCBI chrNW_004624767:18,809,626...18,820,360
Ensembl chrNW_004624767:18,809,689...18,820,390 		JBrowse link
G Tpcn2 two pore segment channel 2 involved_in ISO (PMID:27140606)
(PMID:27231233)		 UniProt PMID:27140606 PMID:27231233 NCBI chrNW_004624767:17,877,791...17,944,190
Ensembl chrNW_004624767:17,918,080...17,944,653 		JBrowse link
G Ttpa alpha tocopherol transfer protein ISO RGD PMID:22147702 RGD:7247589 NCBI chrNW_004624744:28,713,596...28,738,435
Ensembl chrNW_004624744:28,713,320...28,739,539 		JBrowse link
lysosomal lumen acidification term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Atp6ap2 ATPase H+ transporting accessory protein 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004624762:14,952,313...14,975,678
Ensembl chrNW_004624762:14,952,002...14,975,900 		JBrowse link
G Cln3 CLN3 lysosomal/endosomal transmembrane protein, battenin involved_in IEA TreeGrafter
Ensembl		 GO_REF:0000107 GO_REF:0000118 NCBI chrNW_004624782:12,995,277...13,004,980
Ensembl chrNW_004624782:12,995,277...13,005,087 		JBrowse link
G Cln5 CLN5 intracellular trafficking protein involved_in ISO (PMID:11722572) UniProt PMID:11722572 NCBI chrNW_004624751:23,395,284...23,404,798
Ensembl chrNW_004624751:23,396,789...23,404,906 		JBrowse link
G Cln6 CLN6 transmembrane ER protein involved_in ISO (PMID:11722572) UniProt PMID:11722572 NCBI chrNW_004624781:4,866,896...4,879,321
Ensembl chrNW_004624781:4,866,927...4,879,321 		JBrowse link
G Creg1 cellular repressor of E1A stimulated genes 1 acts_upstream_of_or_within ISO (PMID:33966596) MGI PMID:33966596 NCBI chrNW_004624826:5,593,190...5,605,946
Ensembl chrNW_004624826:5,589,791...5,605,893 		JBrowse link
G Grn granulin precursor involved_in ISO (PMID:28073925) UniProt PMID:28073925 NCBI chrNW_004624795:704,066...708,721
Ensembl chrNW_004624795:704,252...707,165 		JBrowse link
G Lamp1 lysosomal associated membrane protein 1 involved_in ISO (PMID:37390818) UniProt PMID:37390818 NCBI chrNW_004624793:661,322...675,603
Ensembl chrNW_004624793:661,342...675,675 		JBrowse link
G Lamp2 lysosomal associated membrane protein 2 involved_in ISO (PMID:37390818) UniProt PMID:37390818 NCBI chrNW_004624931:297,864...343,314
Ensembl chrNW_004624931:298,328...343,915 		JBrowse link
G Ppt1 palmitoyl-protein thioesterase 1 involved_in ISO (PMID:11722572) UniProt PMID:11722572 NCBI chrNW_004624764:22,542,892...22,577,077
Ensembl chrNW_004624764:22,543,857...22,577,121 		JBrowse link
G Snapin SNAP associated protein acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chrNW_004624885:3,490,321...3,491,963
Ensembl chrNW_004624885:3,490,321...3,491,946 		JBrowse link
G Tmem106b transmembrane protein 106B acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chrNW_004624827:7,015,267...7,043,853
Ensembl chrNW_004624827:7,014,842...7,041,871 		JBrowse link
G Tmem9 transmembrane protein 9 involved_in ISO (PMID:30374053) UniProt PMID:30374053 NCBI chrNW_004624807:9,525,770...9,544,757
Ensembl chrNW_004624807:9,525,855...9,544,757 		JBrowse link
G Vma12 vacuolar ATPase assembly factor VMA12 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004624786:961,888...965,911
Ensembl chrNW_004624786:961,890...966,430 		JBrowse link
G Vma22 vacuolar ATPase assembly factor VMA22 involved_in ISO (PMID:28296633) UniProt PMID:28296633 NCBI chrNW_004624732:14,469,377...14,474,540
Ensembl chrNW_004624732:14,466,079...14,474,561 		JBrowse link
lysosomal lumen pH elevation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Cln3 CLN3 lysosomal/endosomal transmembrane protein, battenin involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004624782:12,995,277...13,004,980
Ensembl chrNW_004624782:12,995,277...13,005,087 		JBrowse link
G Oca2 OCA2 melanosomal transmembrane protein involved_in ISO (PMID:25513726), (PMID:32966160) UniProt PMID:25513726 PMID:32966160 NCBI chrNW_004624896:2,163,043...2,432,016
Ensembl chrNW_004624896:2,163,468...2,415,432 		JBrowse link
G Slc45a2 solute carrier family 45 member 2 involved_in ISO (PMID:32966160)
(PMID:35469906)		 UniProt PMID:32966160 PMID:35469906 NCBI chrNW_004624759:20,640,407...20,701,790
Ensembl chrNW_004624759:20,673,033...20,701,361 		JBrowse link
G Tmem175 transmembrane protein 175 involved_in ISO (PMID:35333573), (PMID:35750034), (PMID:37390818) UniProt PMID:35333573 PMID:35750034 PMID:37390818 NCBI chrNW_004624755:26,190,547...26,200,512
Ensembl chrNW_004624755:26,190,547...26,207,793 		JBrowse link
negative regulation of cellular pH reduction term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Bcl2 BCL2 apoptosis regulator involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004624792:8,854,345...9,032,727
Ensembl chrNW_004624792:8,859,522...9,031,344 		JBrowse link
pH elevation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Slc4a1 solute carrier family 4 member 1 (Diego blood group) acts_upstream_of_or_within ISO (PMID:17409310) MGI PMID:17409310 NCBI chrNW_004624795:739,821...752,773
Ensembl chrNW_004624795:743,646...752,103 		JBrowse link
pH reduction term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Atp4a ATPase H+/K+ transporting subunit alpha acts_upstream_of_or_within ISO (PMID:7762614) MGI PMID:7762614 NCBI chrNW_004624794:8,046,638...8,059,359
Ensembl chrNW_004624794:8,033,020...8,060,292 		JBrowse link
G Atp4b ATPase H+/K+ transporting subunit beta ISO RGD PMID:19064992 RGD:14696784 NCBI chrNW_004624793:472,241...479,753
Ensembl chrNW_004624793:472,241...479,753 		JBrowse link
G Atp6v1b1 ATPase H+ transporting V1 subunit B1 involved_in ISO (PMID:16769747), (PMID:20622307) UniProt PMID:16769747 PMID:20622307 NCBI chrNW_004624762:2,445,840...2,480,377
Ensembl chrNW_004624762:2,443,765...2,480,464 		JBrowse link
G Cckbr cholecystokinin B receptor acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chrNW_004624817:7,744,422...7,754,870
Ensembl chrNW_004624817:7,743,865...7,755,453 		JBrowse link
G Rogdi rogdi atypical leucine zipper acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chrNW_004624824:2,649,694...2,655,728
Ensembl chrNW_004624824:2,650,116...2,655,716 		JBrowse link
G Slc4a3 solute carrier family 4 member 3 involved_in ISO (PMID:29167417) UniProt PMID:29167417 NCBI chrNW_004624823:5,440,213...5,453,683
Ensembl chrNW_004624823:5,439,336...5,453,801 		JBrowse link
G Tcirg1 T cell immune regulator 1, ATPase H+ transporting V0 subunit a3 acts_upstream_of_or_within ISO (PMID:23297412)
(PMID:19448635)		 MGI PMID:19448635 PMID:23297412 NCBI chrNW_004624767:18,809,626...18,820,360
Ensembl chrNW_004624767:18,809,689...18,820,390 		JBrowse link
phagosome acidification term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Rab20 RAB20, member RAS oncogene family involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004624793:2,180,803...2,199,420
Ensembl chrNW_004624793:2,180,419...2,198,962 		JBrowse link
G Rab38 RAB38, member RAS oncogene family involved_in ISO (PMID:21255211) UniProt PMID:21255211 NCBI chrNW_004624845:1,908,410...1,983,897
Ensembl chrNW_004624845:1,906,671...1,984,029 		JBrowse link
G Rab39a RAB39A, member RAS oncogene family involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004624784:2,679,281...2,709,514
Ensembl chrNW_004624784:2,679,225...2,710,545 		JBrowse link
G Rab7a RAB7A, member RAS oncogene family involved_in ISO (PMID:21255211) UniProt PMID:21255211 NCBI chrNW_004625042:56,509...112,519
Ensembl chrNW_004625042:56,517...112,612 		JBrowse link
G Slamf8 SLAM family member 8 acts_upstream_of_or_within ISO (PMID:22593622) MGI PMID:22593622 NCBI chrNW_004624794:1,418,727...1,428,836
Ensembl chrNW_004624794:1,418,228...1,429,561 		JBrowse link
G Slc4a7 solute carrier family 4 member 7 involved_in ISO (PMID:29779931) UniProt PMID:29779931 NCBI chrNW_004624788:5,239,858...5,355,186
Ensembl chrNW_004624788:5,243,807...5,355,073 		JBrowse link
G Tcirg1 T cell immune regulator 1, ATPase H+ transporting V0 subunit a3 acts_upstream_of_or_within ISO (PMID:19549681) MGI PMID:19549681 NCBI chrNW_004624767:18,809,626...18,820,360
Ensembl chrNW_004624767:18,809,689...18,820,390 		JBrowse link
positive regulation of cellular pH reduction term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Avp arginine vasopressin ISO RGD PMID:17762181 RGD:2300343 NCBI chrNW_004624741:4,208,305...4,210,097
Ensembl chrNW_004624741:4,208,329...4,210,071 		JBrowse link
G Avpr1a arginine vasopressin receptor 1A ISO RGD PMID:17762181 RGD:2300343 NCBI chrNW_004624802:4,893,172...4,900,177
Ensembl chrNW_004624802:4,894,235...4,900,276 		JBrowse link
G Avpr1b arginine vasopressin receptor 1B ISO RGD PMID:17762181 RGD:2300343 NCBI chrNW_004624807:5,237,036...5,247,383
Ensembl chrNW_004624807:5,237,036...5,241,845 		JBrowse link
G Ca2 carbonic anhydrase 2 acts_upstream_of_or_within ISO (PMID:23881097) RGD
MGI		 PMID:9665810 PMID:23881097 RGD:1342423 NCBI chrNW_004624744:6,168,030...6,183,407
Ensembl chrNW_004624744:6,167,606...6,183,538 		JBrowse link
G Ca7 carbonic anhydrase 7 acts_upstream_of_or_within ISO (PMID:23881097) MGI PMID:23881097 NCBI chrNW_004624746:19,640,436...19,648,708
Ensembl chrNW_004624746:19,640,463...19,648,615 		JBrowse link
regulation of cellular pH term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Atp1a4 ATPase Na+/K+ transporting subunit alpha 4 involved_in ISO (PMID:12112599) RGD
UniProt		 PMID:12112599 RGD:728364 NCBI chrNW_004624794:1,068,056...1,108,303 JBrowse link
G Atp6ap1 ATPase H+ transporting accessory protein 1 involved_in IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004624946:885,400...902,082
Ensembl chrNW_004624946:884,685...902,365 		JBrowse link
G Atp6ap1l ATPase H+ transporting accessory protein 1 like involved_in IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004624743:2,674,161...2,696,968 JBrowse link
G Gpr39 G protein-coupled receptor 39 acts_upstream_of_or_within ISO (PMID:26375174) MGI PMID:26375174 NCBI chrNW_004624732:31,801,512...32,045,271
Ensembl chrNW_004624732:31,801,512...32,045,229 		JBrowse link
G Lacc1 laccase domain containing 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004624748:11,150,678...11,194,794
Ensembl chrNW_004624748:11,187,316...11,194,841 		JBrowse link
G Mafg MAF bZIP transcription factor G ISO RGD PMID:11583919 RGD:633304 NCBI chrNW_004624801:10,760,599...10,769,578
Ensembl chrNW_004624801:10,764,186...10,769,454 		JBrowse link
G Mapk1 mitogen-activated protein kinase 1 acts_upstream_of_or_within ISO (PMID:26375174) MGI PMID:26375174 NCBI chrNW_004624747:1,296,062...1,389,674
Ensembl chrNW_004624747:1,296,221...1,389,757 		JBrowse link
G Mapk3 mitogen-activated protein kinase 3 acts_upstream_of_or_within ISO (PMID:26375174) MGI PMID:26375174 NCBI chrNW_004624782:13,150,824...13,158,327
Ensembl chrNW_004624782:13,152,039...13,159,113 		JBrowse link
G Slc4a10 solute carrier family 4 member 10 acts_upstream_of_or_within ISO (PMID:18165320) MGI PMID:18165320 NCBI chrNW_004624732:3,541,525...3,849,805
Ensembl chrNW_004624732:3,540,954...3,849,863 		JBrowse link
regulation of Golgi lumen acidification term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Slc9a7 solute carrier family 9 member A7 involved_in ISO (PMID:30335141) UniProt PMID:30335141 NCBI chrNW_004624887:3,403,764...3,563,699
Ensembl chrNW_004624887:3,408,109...3,563,639 		JBrowse link
G Slc9a8 solute carrier family 9 member A8 involved_in ISO (PMID:15522866) UniProt PMID:15522866 NCBI chrNW_004624790:5,580,655...5,644,396
Ensembl chrNW_004624790:5,582,176...5,645,091 		JBrowse link
regulation of intracellular pH term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Atp5f1b ATP synthase F1 subunit beta involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004624802:11,400,288...11,408,785
Ensembl chrNW_004624802:11,399,474...11,409,700 		JBrowse link
G Ca2 carbonic anhydrase 2 involved_in IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004624744:6,168,030...6,183,407
Ensembl chrNW_004624744:6,167,606...6,183,538 		JBrowse link
G Ca7 carbonic anhydrase 7 involved_in IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004624746:19,640,436...19,648,708
Ensembl chrNW_004624746:19,640,463...19,648,615 		JBrowse link
G Chp1 calcineurin like EF-hand protein 1 involved_in ISO (PMID:15035633), (PMID:8901634) UniProt PMID:8901634 PMID:15035633 NCBI chrNW_004624804:8,431,999...8,474,458
Ensembl chrNW_004624804:8,431,996...8,474,458 		JBrowse link
G Cln3 CLN3 lysosomal/endosomal transmembrane protein, battenin involved_in IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004624782:12,995,277...13,004,980
Ensembl chrNW_004624782:12,995,277...13,005,087 		JBrowse link
G Hvcn1 hydrogen voltage gated channel 1 involved_in ISO (PMID:24415791)
(PMID:20548053)		 RGD
UniProt		 PMID:20548053 PMID:24415791 PMID:24935944 RGD:14985214 NCBI chrNW_004624747:21,237,736...21,266,531
Ensembl chrNW_004624747:21,256,918...21,264,984 		JBrowse link
G Slc26a6 solute carrier family 26 member 6 involved_in ISO (PMID:15990874)
(PMID:20150244)
(PMID:20501439)		 UniProt PMID:15990874 PMID:20150244 PMID:20501439 NCBI chrNW_004624730:2,639,940...2,649,358
Ensembl chrNW_004624730:2,640,208...2,649,203 		JBrowse link
G Slc4a1 solute carrier family 4 member 1 (Diego blood group) involved_in IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004624795:739,821...752,773
Ensembl chrNW_004624795:743,646...752,103 		JBrowse link
G Slc4a10 solute carrier family 4 member 10 involved_in IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004624732:3,541,525...3,849,805
Ensembl chrNW_004624732:3,540,954...3,849,863 		JBrowse link
G Slc4a2 solute carrier family 4 member 2 involved_in ISO
IEA		 RGD
TreeGrafter		 PMID:16440368 GO_REF:0000118 RGD:9999231 NCBI chrNW_004624800:5,545,380...5,560,789 JBrowse link
G Slc4a3 solute carrier family 4 member 3 acts_upstream_of_or_within
involved_in		 ISO
IEA		 (PMID:2686841) MGI
TreeGrafter		 PMID:2686841 GO_REF:0000118 NCBI chrNW_004624823:5,440,213...5,453,683
Ensembl chrNW_004624823:5,439,336...5,453,801 		JBrowse link
G Slc4a4 solute carrier family 4 member 4 acts_upstream_of
involved_in		 ISO
IEA		 (PMID:21976511)
(PMID:10069984)		 ARUK-UCL
TreeGrafter		 PMID:10069984 PMID:21976511 GO_REF:0000118 NCBI chrNW_004624890:2,523,368...2,940,081
Ensembl chrNW_004624890:2,523,327...2,919,148 		JBrowse link
G Slc4a5 solute carrier family 4 member 5 involved_in IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004624749:29,148,666...29,264,193
Ensembl chrNW_004624749:29,146,873...29,266,050 		JBrowse link
G Slc4a7 solute carrier family 4 member 7 involved_in IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004624788:5,239,858...5,355,186
Ensembl chrNW_004624788:5,243,807...5,355,073 		JBrowse link
G Slc4a8 solute carrier family 4 member 8 acts_upstream_of_or_within
involved_in		 ISO
IEA		 (PMID:11133997), (PMID:18577713)
(PMID:21593314)		 ARUK-UCL
TreeGrafter		 PMID:11133997 PMID:18577713 PMID:21593314 GO_REF:0000118 NCBI chrNW_004624816:714,766...821,340
Ensembl chrNW_004624816:738,237...822,140 		JBrowse link
G Slc4a9 solute carrier family 4 member 9 involved_in IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004624743:33,137,588...33,165,882
Ensembl chrNW_004624743:33,137,641...33,151,287 		JBrowse link
G Slc9a1 solute carrier family 9 member A1 involved_in ISO
IEA		 RGD
TreeGrafter
Ensembl		 PMID:22387884 GO_REF:0000107 GO_REF:0000118 RGD:6771326 NCBI chrNW_004624764:11,041,118...11,095,892
Ensembl chrNW_004624764:11,039,051...11,095,885 		JBrowse link
G Slc9a2 solute carrier family 9 member A2 involved_in IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004624749:7,100,585...7,188,744
Ensembl chrNW_004624749:7,100,607...7,189,494 		JBrowse link
G Slc9a3 solute carrier family 9 member A3 involved_in IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004624751:254,373...290,218
Ensembl chrNW_004624751:256,305...291,178 		JBrowse link
G Slc9a4 solute carrier family 9 member A4 involved_in IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004624749:6,972,364...7,025,929
Ensembl chrNW_004624749:6,972,904...7,024,665 		JBrowse link
G Slc9a5 solute carrier family 9 member A5 involved_in IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004624746:19,051,508...19,074,103
Ensembl chrNW_004624746:19,051,515...19,074,076 		JBrowse link
G Slc9a6 solute carrier family 9 member A6 involved_in IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004624808:11,107,125...11,157,913 JBrowse link
G Slc9a7 solute carrier family 9 member A7 involved_in IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004624887:3,403,764...3,563,699
Ensembl chrNW_004624887:3,408,109...3,563,639 		JBrowse link
G Slc9a8 solute carrier family 9 member A8 involved_in IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004624790:5,580,655...5,644,396
Ensembl chrNW_004624790:5,582,176...5,645,091 		JBrowse link
G Slc9a9 solute carrier family 9 member A9 involved_in IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004624730:19,902,504...20,514,138
Ensembl chrNW_004624730:19,902,620...20,514,160 		JBrowse link
G Slc9c1 solute carrier family 9 member C1 involved_in IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004624731:36,291,310...36,430,429
Ensembl chrNW_004624731:36,291,303...36,430,572 		JBrowse link
G Slc9c2 solute carrier family 9 member C2 (putative) involved_in IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004624771:8,175,164...8,268,303
Ensembl chrNW_004624771:8,187,118...8,268,333 		JBrowse link
G Tm9sf4 transmembrane 9 superfamily member 4 involved_in ISO (PMID:19893578) UniProt PMID:19893578 NCBI chrNW_004624741:402,111...447,871
Ensembl chrNW_004624741:402,111...447,867 		JBrowse link
G Tp53 tumor protein p53 ISO RGD PMID:16688778 RGD:1598619 NCBI chrNW_004624786:10,266,316...10,282,664
Ensembl chrNW_004624786:10,263,518...10,271,218 		JBrowse link
regulation of lysosomal lumen pH term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Lrrk2 leucine rich repeat kinase 2 involved_in ISO (PMID:22012985) ParkinsonsUK-UCL PMID:22012985 NCBI chrNW_004624778:106,594...279,325
Ensembl chrNW_004624778:108,761...279,230 		JBrowse link
G Spns1 SPNS lysolipid transporter 1, lysophospholipid acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chrNW_004624782:12,799,850...12,807,159
Ensembl chrNW_004624782:12,799,038...12,807,121 		JBrowse link
G Tasl TLR adaptor interacting with endolysosomal SLC15A4 involved_in IEA Ensembl
TreeGrafter		 GO_REF:0000107 GO_REF:0000118 NCBI chrNW_004624762:25,427,519...25,448,180
Ensembl chrNW_004624762:25,430,926...25,448,114 		JBrowse link
G Tmem165 transmembrane protein 165 involved_in ISO (PMID:23569283) UniProt PMID:23569283 NCBI chrNW_004624761:14,039,698...14,066,750
Ensembl chrNW_004624761:14,038,758...14,066,894 		JBrowse link
G Tmem175 transmembrane protein 175 involved_in ISO (PMID:35750034)
(PMID:26317472)		 UniProt PMID:26317472 PMID:35750034 NCBI chrNW_004624755:26,190,547...26,200,512
Ensembl chrNW_004624755:26,190,547...26,207,793 		JBrowse link
G Vps33a VPS33A core subunit of CORVET and HOPS complexes involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004624747:22,458,098...22,478,735
Ensembl chrNW_004624747:22,461,346...22,478,867 		JBrowse link
vacuolar acidification term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Atp6v0a1 ATPase H+ transporting V0 subunit a1 involved_in IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004624795:1,561,104...1,607,693
Ensembl chrNW_004624795:1,560,995...1,608,067 		JBrowse link
G Atp6v0a2 ATPase H+ transporting V0 subunit a2 involved_in IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004624747:23,471,697...23,501,018
Ensembl chrNW_004624747:23,471,403...23,504,576 		JBrowse link
G Atp6v0a4 ATPase H+ transporting V0 subunit a4 involved_in IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004624765:19,149,353...19,219,242
Ensembl chrNW_004624765:19,149,589...19,194,158 		JBrowse link
G Atp6v1b1 ATPase H+ transporting V1 subunit B1 involved_in IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004624762:2,445,840...2,480,377
Ensembl chrNW_004624762:2,443,765...2,480,464 		JBrowse link
G Atp6v1b2 ATPase H+ transporting V1 subunit B2 involved_in IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004624758:15,910,189...15,933,975
Ensembl chrNW_004624758:15,910,132...15,935,160 		JBrowse link
G Clic4 chloride intracellular channel 4 acts_upstream_of_or_within ISO (PMID:19197003) MGI PMID:19197003 NCBI chrNW_004624764:9,088,352...9,149,194 JBrowse link
G Dmxl1 Dmx like 1 involved_in IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004624733:2,438,874...2,610,987
Ensembl chrNW_004624733:2,440,068...2,610,899 		JBrowse link
G Dmxl2 Dmx like 2 involved_in IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004624731:8,702,288...8,843,807
Ensembl chrNW_004624731:8,702,137...8,842,653 		JBrowse link
G Slc11a1 solute carrier family 11 member 1 acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chrNW_004624823:6,612,452...6,625,047
Ensembl chrNW_004624823:6,612,452...6,625,300 		JBrowse link
G Tcirg1 T cell immune regulator 1, ATPase H+ transporting V0 subunit a3 involved_in IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004624767:18,809,626...18,820,360
Ensembl chrNW_004624767:18,809,689...18,820,390 		JBrowse link
Term paths to the root
Path 1
Term Annotations click to browse term
  biological_process 17650
    biological regulation 11838
      regulation of pH 101
        pH elevation 1
        pH reduction 7
        regulation of cellular pH + 86
Path 2
Term Annotations click to browse term
  biological_process 17650
    homeostatic process 1826
      chemical homeostasis 1111
        monoatomic ion homeostasis 618
          monoatomic cation homeostasis 604
            regulation of pH 101
              pH elevation 1
              pH reduction 7
              regulation of cellular pH + 86
paths to the root