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ONTOLOGY REPORT - ANNOTATIONS


Term:regulation of pH
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Accession:GO:0006885 term browser browse the term
Definition:Any process involved in the maintenance of an internal equilibrium of hydrogen ions, thereby modulating the internal pH, within an organism or cell.
Synonyms:exact_synonym: hydrogen ion homeostasis



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regulation of pH term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Agtr1a angiotensin II receptor, type 1a IDA RGD PMID:11906170 RGD:70819 NCBI chr17:34,383,397...34,435,523 JBrowse link
G Atp12a ATPase H+/K+ transporting non-gastric alpha2 subunit involved_in
acts_upstream_of_or_within
IEA
ISO
GO_REF:0000107
MGI:2177160 (PMID:16525125)
Ensembl
RGD
PMID:16525125 GO_REF:0000107 NCBI chr15:30,443,571...30,468,229 JBrowse link
G Atp6v0a4 ATPase H+ transporting V0 subunit a4 involved_in ISO (PMID:10973252) RGD PMID:10973252 NCBI chr 4:67,727,145...67,809,092 JBrowse link
G Atp6v1b1 ATPase H+ transporting V1 subunit B1 involved_in
acts_upstream_of_or_within
ISS
ISO
GO_REF:0000024
(PMID:17898041)
MGI:2673510 (PMID:16174750)
(PMID:9916796)
(PMID:12414817)
UniProt
RGD
PMID:9916796 PMID:12414817 PMID:16174750 PMID:17898041 GO_REF:0000024 NCBI chr 4:117,781,444...117,800,103 JBrowse link
G Edn1 endothelin 1 acts_upstream_of_or_within ISO (PMID:11413164) RGD PMID:11413164 NCBI chr17:22,660,799...22,666,687 JBrowse link
G Ednrb endothelin receptor type B acts_upstream_of_or_within ISO MGI:1857161 (PMID:11413164) RGD PMID:11413164 NCBI chr15:87,055,490...87,086,765 JBrowse link
G Kcnj16 potassium inwardly-rectifying channel, subfamily J, member 16 IMP RGD PMID:30605394 RGD:38500203 NCBI chr10:96,489,329...96,520,745 JBrowse link
G Pdk2 pyruvate dehydrogenase kinase 2 involved_in ISS
ISO
IEA
GO_REF:0000024
(PMID:22360721)
GO_REF:0000107
UniProt
RGD
Ensembl
PMID:22360721 GO_REF:0000024 GO_REF:0000107 NCBI chr10:80,469,388...80,483,988 JBrowse link
G Pdk4 pyruvate dehydrogenase kinase 4 involved_in ISS
ISO
IEA
GO_REF:0000024
(PMID:22360721)
GO_REF:0000107
UniProt
RGD
Ensembl
PMID:22360721 GO_REF:0000024 GO_REF:0000107 NCBI chr 4:34,558,327...34,568,329 JBrowse link
G Rhcg Rh family, C glycoprotein involved_in IEA
ISO
GO_REF:0000107
(PMID:19020613)
Ensembl
RGD
PMID:19020613 GO_REF:0000107 NCBI chr 1:142,941,046...142,965,242 JBrowse link
G Rogdi rogdi atypical leucine zipper acts_upstream_of_or_within ISO (PMID:38172607) RGD PMID:38172607 NCBI chr10:10,567,834...10,572,453 JBrowse link
G Slc26a4 solute carrier family 26 member 4 involved_in ISS
ISO
GO_REF:0000024
(PMID:16144965)
UniProt
RGD
PMID:16144965 GO_REF:0000024 NCBI chr 6:53,835,102...53,873,968 JBrowse link
G Slc26a9 solute carrier family 26 member 9 acts_upstream_of_or_within ISO (PMID:15800055) RGD PMID:15800055 NCBI chr13:43,177,806...43,205,450 JBrowse link
G Slc4a10 solute carrier family 4 member 10 acts_upstream_of_or_within ISO (PMID:10993873) RGD PMID:10993873 NCBI chr 3:46,665,076...46,959,088 JBrowse link
G Slc4a4 solute carrier family 4 member 4 TAS RGD PMID:11788449 RGD:70580 NCBI chr14:19,125,394...19,577,379 JBrowse link
G Slc4a5 solute carrier family 4 member 5 TAS RGD PMID:15151908 RGD:1303995 NCBI chr 4:115,710,101...115,810,330 JBrowse link
G Slc9a1 solute carrier family 9 member A1 involved_in
acts_upstream_of_or_within
ISS
ISO
GO_REF:0000024
MGI:2429323 (PMID:10666043), (PMID:10673550)
(PMID:8901634)
UniProt
RGD
PMID:8901634 PMID:10666043 PMID:10673550 GO_REF:0000024 NCBI chr 5:145,576,341...145,629,630 JBrowse link
G Slc9a2 solute carrier family 9 member A2 acts_upstream_of_or_within
involved_in
ISO
IEA
(PMID:10666043)
GO_REF:0000002
RGD
InterPro
PMID:10666043 GO_REF:0000002 NCBI chr 9:42,932,001...43,014,447 JBrowse link
G Slc9a3 solute carrier family 9 member A3 involved_in
acts_upstream_of_or_within
IDA
IEA
ISO
GO_REF:0000002
(PMID:10666043)
InterPro
RGD
PMID:10666043 PMID:15265811 GO_REF:0000002, RGD:1625070 NCBI chr 1:29,124,633...29,167,912 JBrowse link
G Slc9a4 solute carrier family 9 member A4 involved_in IEA GO_REF:0000002 InterPro GO_REF:0000002 NCBI chr 9:50,320,948...50,375,336 JBrowse link
G Slc9a7 solute carrier family 9 member A7 involved_in ISO (PMID:11279194) RGD PMID:11279194 NCBI chr  X:2,214,064...2,395,052 JBrowse link
G Wdr72 WD repeat domain 72 acts_upstream_of_or_within ISO (PMID:35181734) RGD PMID:35181734 NCBI chr 8:83,718,897...83,902,128 JBrowse link
endosomal lumen acidification term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Aqp11 aquaporin 11 acts_upstream_of_or_within ISO MGI:3528447 (PMID:16107722) RGD PMID:16107722 NCBI chr 1:152,046,515...152,056,675 JBrowse link
G Faslg Fas ligand IDA RGD PMID:18045865 RGD:2315735 NCBI chr13:76,680,885...76,706,042 JBrowse link
G Rnasek ribonuclease K involved_in ISO UniProtKB:Q15904 (PMID:26212330) RGD PMID:26212330 NCBI chr10:54,954,904...54,956,622 JBrowse link
G Tmem9 transmembrane protein 9 involved_in ISO (PMID:30374053) RGD PMID:30374053 NCBI chr13:50,008,829...50,027,556 JBrowse link
intracellular pH elevation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Cftr CF transmembrane conductance regulator involved_in ISS
IEA
ISO
GO_REF:0000024
GO_REF:0000107
(PMID:21976599)
UniProt
Ensembl
RGD
PMID:21976599 GO_REF:0000024 GO_REF:0000107 NCBI chr 4:47,422,084...47,694,646 JBrowse link
G Slc26a3 solute carrier family 26 member 3 involved_in ISS
ISO
GO_REF:0000024
(PMID:21976599)
UniProt
RGD
PMID:21976599 GO_REF:0000024 NCBI chr 6:53,751,415...53,792,300 JBrowse link
G Slc26a6 solute carrier family 26 member 6 involved_in ISO (PMID:21976599) RGD PMID:21976599 NCBI chr 8:109,558,968...109,569,778 JBrowse link
intracellular pH reduction term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Gpr89b G protein-coupled receptor 89B involved_in ISO
IBA
(PMID:18794847)
GO_REF:0000033
RGD
GO_Central
PMID:18794847 GO_REF:0000033 NCBI chr 2:184,408,136...184,445,560 JBrowse link
G Slc12a5 solute carrier family 12 member 5 IDA RGD PMID:16420452 RGD:2303953 NCBI chr 3:153,696,517...153,735,801 JBrowse link
G Tcirg1 T-cell immune regulator 1, ATPase H+ transporting V0 subunit A3 acts_upstream_of_or_within ISO (PMID:23908015) RGD PMID:23908015 NCBI chr 1:210,556,270...210,568,021 JBrowse link
G Tpcn2 two pore segment channel 2 involved_in ISO (PMID:27140606)
(PMID:27231233)
RGD PMID:27140606 PMID:27231233 NCBI chr 1:209,845,827...209,875,561 JBrowse link
G Ttpa alpha tocopherol transfer protein IDA RGD PMID:22147702 RGD:7247589 NCBI chr 5:33,497,537...33,518,936 JBrowse link
lysosomal lumen acidification term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Atp6ap2 ATPase H+ transporting accessory protein 2 involved_in ISO
IEA
ISS
(PMID:32276428)
GO_REF:0000107
GO_REF:0000024
RGD
Ensembl
UniProt
PMID:32276428 GO_REF:0000024 GO_REF:0000107 NCBI chr  X:10,183,983...10,210,948 JBrowse link
G Ccdc115 coiled-coil domain containing 115 involved_in ISO (PMID:28296633) RGD PMID:28296633 NCBI chr 9:36,650,384...36,654,348 JBrowse link
G Cln3 CLN3 lysosomal/endosomal transmembrane protein, battenin involved_in ISO
IBA
(PMID:11722572)
GO_REF:0000033
RGD
GO_Central
PMID:11722572 GO_REF:0000033 NCBI chr 1:181,156,071...181,169,458 JBrowse link
G Cln5 CLN5, intracellular trafficking protein involved_in ISO (PMID:11722572) RGD PMID:11722572 NCBI chr15:79,893,573...79,903,438 JBrowse link
G Cln6 CLN6, transmembrane ER protein involved_in ISO (PMID:11722572) RGD PMID:11722572 NCBI chr 8:63,303,356...63,318,360 JBrowse link
G Creg1 cellular repressor of E1A-stimulated genes 1 acts_upstream_of_or_within ISO (PMID:33966596) RGD PMID:33966596 NCBI chr13:80,552,779...80,565,272 JBrowse link
G Grn granulin precursor involved_in ISS
IEA
ISO
GO_REF:0000024
GO_REF:0000107
(PMID:28073925)
UniProt
Ensembl
RGD
PMID:28073925 GO_REF:0000024 GO_REF:0000107 NCBI chr10:87,387,672...87,393,777 JBrowse link
G Lamp1 lysosomal-associated membrane protein 1 involved_in IEA
ISO
ISS
GO_REF:0000107
(PMID:37390818)
GO_REF:0000024
Ensembl
RGD
UniProt
PMID:37390818 GO_REF:0000024 GO_REF:0000107 NCBI chr16:83,058,131...83,082,843 JBrowse link
G Lamp2 lysosomal-associated membrane protein 2 involved_in IEA
ISO
ISS
GO_REF:0000107
(PMID:37390818)
GO_REF:0000024
Ensembl
RGD
UniProt
PMID:37390818 GO_REF:0000024 GO_REF:0000107 NCBI chr  X:122,038,734...122,087,745 JBrowse link
G Ppt1 palmitoyl-protein thioesterase 1 involved_in ISO
ISS
(PMID:11722572)
PMID:8895569
RGD PMID:11722572 PMID:8895569 RGD:8553248 NCBI chr 5:135,121,164...135,142,048 JBrowse link
G Snapin SNAP-associated protein acts_upstream_of_or_within ISO MGI:3608768 (PMID:20920792) RGD PMID:20920792 NCBI chr 2:175,971,575...175,974,164 JBrowse link
G Tmem106b transmembrane protein 106B acts_upstream_of_or_within ISO MGI:5319917 (PMID:28728022) RGD PMID:28728022 NCBI chr 4:41,328,125...41,347,315 JBrowse link
G Tmem199 transmembrane protein 199 involved_in ISO
IEA
ISS
(PMID:28296633)
GO_REF:0000107
GO_REF:0000024
RGD
Ensembl
UniProt
PMID:28296633 GO_REF:0000024 GO_REF:0000107 NCBI chr10:63,402,493...63,407,065 JBrowse link
G Tmem9 transmembrane protein 9 involved_in ISO (PMID:30374053) RGD PMID:30374053 NCBI chr13:50,008,829...50,027,556 JBrowse link
lysosomal lumen pH elevation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Cln3 CLN3 lysosomal/endosomal transmembrane protein, battenin involved_in ISO (PMID:10924275) RGD PMID:10924275 NCBI chr 1:181,156,071...181,169,458 JBrowse link
G Oca2 OCA2 melanosomal transmembrane protein involved_in ISO (PMID:25513726), (PMID:32966160) RGD PMID:25513726 PMID:32966160 NCBI chr 1:107,116,278...107,446,093 JBrowse link
G Slc45a2 solute carrier family 45, member 2 involved_in ISO (PMID:32966160)
(PMID:35469906)
RGD PMID:32966160 PMID:35469906 NCBI chr 2:59,963,599...59,996,408 JBrowse link
G Tmem175 transmembrane protein 175 involved_in ISS
ISO
GO_REF:0000024
(PMID:35333573), (PMID:35750034), (PMID:37390818)
UniProt
RGD
PMID:35333573 PMID:35750034 PMID:37390818 GO_REF:0000024 NCBI chr14:1,073,410...1,089,764 JBrowse link
negative regulation of cellular pH reduction term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Bcl2 BCL2, apoptosis regulator involved_in ISO
IEA
(PMID:10506221)
GO_REF:0000107
RGD
Ensembl
PMID:10506221 GO_REF:0000107 NCBI chr13:23,204,464...23,366,900 JBrowse link
pH elevation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Slc4a1 solute carrier family 4 member 1 (Diego blood group) involved_in
acts_upstream_of_or_within
IEA
ISO
GO_REF:0000107
MGI:1857140 (PMID:17409310)
Ensembl
RGD
PMID:17409310 GO_REF:0000107 NCBI chr10:87,807,010...87,823,274 JBrowse link
pH reduction term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Atp4a ATPase H+/K+ transporting subunit alpha involved_in
acts_upstream_of_or_within
IEA
ISO
GO_REF:0000107
(PMID:7762614)
Ensembl
RGD
PMID:7762614 GO_REF:0000107 NCBI chr 1:85,961,607...85,974,972 JBrowse link
G Atp4b ATPase H+/K+ transporting subunit beta IMP RGD PMID:19064992 RGD:14696784 NCBI chr16:76,144,150...76,153,063 JBrowse link
G Atp6v1b1 ATPase H+ transporting V1 subunit B1 involved_in ISO (PMID:16769747), (PMID:20622307) RGD PMID:16769747 PMID:20622307 NCBI chr 4:117,781,444...117,800,103 JBrowse link
G Cckbr cholecystokinin B receptor involved_in
acts_upstream_of_or_within
IEA
ISO
GO_REF:0000107
MGI:2180591 (PMID:19448635)
Ensembl
RGD
PMID:19448635 GO_REF:0000107 NCBI chr 1:159,771,733...159,781,738 JBrowse link
G Rogdi rogdi atypical leucine zipper acts_upstream_of_or_within ISO (PMID:38172607) RGD PMID:38172607 NCBI chr10:10,567,834...10,572,453 JBrowse link
G Slc4a3 solute carrier family 4 member 3 involved_in IEA
ISO
ISS
GO_REF:0000107
(PMID:29167417)
GO_REF:0000024
Ensembl
RGD
UniProt
PMID:29167417 GO_REF:0000024 GO_REF:0000107 NCBI chr 9:77,036,243...77,053,940 JBrowse link
G Tcirg1 T-cell immune regulator 1, ATPase H+ transporting V0 subunit A3 acts_upstream_of_or_within ISO MGI:1856973 (PMID:19448635), (PMID:23297412) RGD PMID:19448635 PMID:23297412 NCBI chr 1:210,556,270...210,568,021 JBrowse link
phagosome acidification term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Rab20 RAB20, member RAS oncogene family involved_in ISO (PMID:21255211) RGD PMID:21255211 NCBI chr16:84,721,427...84,745,610 JBrowse link
G Rab38 RAB38, member RAS oncogene family involved_in ISO (PMID:21255211) RGD PMID:21255211 NCBI chr 1:142,182,566...142,262,923 JBrowse link
G Rab39a RAB39A, member RAS oncogene family involved_in ISO (PMID:21255211) RGD PMID:21255211 NCBI chr 8:54,088,246...54,105,867 JBrowse link
G Rab7a RAB7A, member RAS oncogene family involved_in ISO
ISS
(PMID:21255211)
GO_REF:0000024
RGD
UniProt
PMID:21255211 GO_REF:0000024 NCBI chr 4:120,461,966...120,510,756 JBrowse link
G Slamf8 SLAM family member 8 acts_upstream_of_or_within ISO MGI:5442794 (PMID:22593622) RGD PMID:22593622 NCBI chr13:85,047,729...85,057,571 JBrowse link
G Slc4a7 solute carrier family 4 member 7 involved_in ISO (PMID:29779931) RGD PMID:29779931 NCBI chr15:13,015,854...13,095,485 JBrowse link
G Tcirg1 T-cell immune regulator 1, ATPase H+ transporting V0 subunit A3 acts_upstream_of_or_within ISO MGI:3852642 (PMID:19549681) RGD PMID:19549681 NCBI chr 1:210,556,270...210,568,021 JBrowse link
positive regulation of cellular pH reduction term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Avp arginine vasopressin IMP RGD PMID:17762181 RGD:2300343 NCBI chr 3:138,246,544...138,248,522 JBrowse link
G Avpr1a arginine vasopressin receptor 1A IMP RGD PMID:17762181 RGD:2300343 NCBI chr 7:59,999,743...60,003,667 JBrowse link
G Avpr1b arginine vasopressin receptor 1B IMP RGD PMID:17762181 RGD:2300343 NCBI chr13:43,046,531...43,059,046 JBrowse link
G Car2 carbonic anhydrase 2 acts_upstream_of_or_within IMP
ISO
MGI:2135646 (PMID:23881097) RGD PMID:23881097 PMID:9665810 RGD:1342423 NCBI chr 2:88,462,883...88,478,012 JBrowse link
G Car7 carbonic anhydrase 7 acts_upstream_of_or_within ISO MGI:5543604 (PMID:23881097) RGD PMID:23881097 NCBI chr19:435,520...444,927 JBrowse link
positive regulation of Golgi lumen acidification term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ube3a ubiquitin protein ligase E3A involved_in IMP
ISO
PMID:23447592
(PMID:23447592)
RGD PMID:23447592 PMID:23447592 RGD:15023469 NCBI chr 1:119,204,244...119,297,097 JBrowse link
regulation of cellular pH term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Atp1a4 ATPase Na+/K+ transporting subunit alpha 4 involved_in IDA
IEA
ISS
ISO
GO_REF:0000107
GO_REF:0000024
(PMID:12112599)
Ensembl
UniProt
RGD
PMID:12112599 PMID:12112599 GO_REF:0000024 GO_REF:0000107, RGD:728364 NCBI chr13:84,683,766...84,719,790 JBrowse link
G Atp6ap1 ATPase H+ transporting accessory protein 1 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr  X:157,231,243...157,238,323 JBrowse link
G Atp6ap1l ATPase H+ transporting accessory protein 1 like involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr 2:22,037,542...22,079,376 JBrowse link
G Atp6v1b2 ATPase H+ transporting V1 subunit B2 TAS RGD PMID:15013950 RGD:1304309 NCBI chr16:20,617,515...20,641,651 JBrowse link
G Car2 carbonic anhydrase 2 TAS RGD PMID:9665810 RGD:1342423 NCBI chr 2:88,462,883...88,478,012 JBrowse link
G Chp2 calcineurin-like EF hand protein 2 TAS RGD PMID:12576672 RGD:1299552 NCBI chr 1:186,189,090...186,203,663 JBrowse link
G Gpr39 G protein-coupled receptor 39 acts_upstream_of_or_within ISO (PMID:26375174) RGD PMID:26375174 NCBI chr13:37,115,258...37,327,312 JBrowse link
G Lacc1 laccase domain containing 1 involved_in ISO (PMID:31978345) RGD PMID:31978345 NCBI chr15:52,390,267...52,407,630 JBrowse link
G Mafg MAF bZIP transcription factor G IDA RGD PMID:11583919 RGD:633304 NCBI chr10:106,401,633...106,410,159 JBrowse link
G Mapk1 mitogen activated protein kinase 1 involved_in
acts_upstream_of_or_within
IEA
ISO
GO_REF:0000107
(PMID:26375174)
Ensembl
RGD
PMID:26375174 GO_REF:0000107 NCBI chr11:97,462,025...97,529,193 JBrowse link
G Mapk3 mitogen activated protein kinase 3 acts_upstream_of_or_within ISO (PMID:26375174) RGD PMID:26375174 NCBI chr 1:190,797,189...190,803,411 JBrowse link
G Slc4a10 solute carrier family 4 member 10 acts_upstream_of_or_within
involved_in
ISO
IEA
MGI:3774019 (PMID:18165320)
GO_REF:0000107
RGD
Ensembl
PMID:18165320 GO_REF:0000107 NCBI chr 3:46,665,076...46,959,088 JBrowse link
regulation of Golgi lumen acidification term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Slc9a7 solute carrier family 9 member A7 involved_in ISO (PMID:30335141) RGD PMID:30335141 NCBI chr  X:2,214,064...2,395,052 JBrowse link
G Slc9a8 solute carrier family 9 member A8 involved_in IEA
ISO
GO_REF:0000107
(PMID:15522866)
Ensembl
RGD
PMID:15522866 GO_REF:0000107 NCBI chr 3:156,147,855...156,198,497 JBrowse link
regulation of intracellular pH term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ankrd45 ankyrin repeat domain 45 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr13:73,424,766...73,450,466 JBrowse link
G Atp5f1b ATP synthase F1 subunit beta involved_in ISO
IEA
(PMID:17510399)
GO_REF:0000107
RGD
Ensembl
PMID:17510399 GO_REF:0000107 NCBI chr 7:515,454...521,858 JBrowse link
G Car2 carbonic anhydrase 2 involved_in ISS
IBA
ISO
GO_REF:0000024
GO_REF:0000033
(PMID:20150244)
UniProt
GO_Central
RGD
PMID:20150244 GO_REF:0000024 GO_REF:0000033 NCBI chr 2:88,462,883...88,478,012 JBrowse link
G Chp1 calcineurin-like EF-hand protein 1 involved_in ISO
ISS
(PMID:15035633), (PMID:8901634)
GO_REF:0000024
RGD
UniProt
PMID:8901634 PMID:15035633 GO_REF:0000024 NCBI chr 3:126,989,800...127,025,071 JBrowse link
G Clcnkb chloride voltage-gated channel Kb involved_in IEA
ISO
GO_REF:0000107
(PMID:35349181)
Ensembl
RGD
PMID:35349181 GO_REF:0000107 NCBI chr 5:153,710,086...153,733,162 JBrowse link
G Hvcn1 hydrogen voltage-gated channel 1 involved_in IMP
ISO
(PMID:24415791)
(PMID:20548053)
RGD PMID:20548053 PMID:24415791 PMID:24935944 RGD:14985214 NCBI chr12:34,341,673...34,370,010 JBrowse link
G Slc26a6 solute carrier family 26 member 6 involved_in ISO (PMID:15990874)
(PMID:20150244)
(PMID:20501439)
RGD PMID:15990874 PMID:20150244 PMID:20501439 NCBI chr 8:109,558,968...109,569,778 JBrowse link
G Slc4a1 solute carrier family 4 member 1 (Diego blood group) involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr10:87,807,010...87,823,274 JBrowse link
G Slc4a10 solute carrier family 4 member 10 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr 3:46,665,076...46,959,088 JBrowse link
G Slc4a2 solute carrier family 4 member 2 involved_in IMP
IBA
GO_REF:0000033 GO_Central
RGD
PMID:16440368 GO_REF:0000033, RGD:9999231 NCBI chr 4:11,628,860...11,646,961 JBrowse link
G Slc4a3 solute carrier family 4 member 3 involved_in
acts_upstream_of_or_within
IEA
ISO
IBA
GO_REF:0000107
(PMID:2686841)
GO_REF:0000033
Ensembl
RGD
GO_Central
PMID:2686841 GO_REF:0000033 GO_REF:0000107 NCBI chr 9:77,036,243...77,053,940 JBrowse link
G Slc4a4 solute carrier family 4 member 4 involved_in
acts_upstream_of
ISO
IBA
IEA
(PMID:24453308)
(PMID:21976511)
GO_REF:0000033
GO_REF:0000107
UniProtKB:Q9JK62 (PMID:10069984), (PMID:21976511)
RGD
GO_Central
Ensembl
PMID:10069984 PMID:21976511 PMID:24453308 GO_REF:0000033 GO_REF:0000107 NCBI chr14:19,125,394...19,577,379 JBrowse link
G Slc4a5 solute carrier family 4 member 5 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr 4:115,710,101...115,810,330 JBrowse link
G Slc4a7 solute carrier family 4 member 7 involved_in IBA
ISO
GO_REF:0000033
(PMID:16439691), (PMID:22586225), (PMID:23401617)
GO_Central
RGD
PMID:16439691 PMID:22586225 PMID:23401617 GO_REF:0000033 NCBI chr15:13,015,854...13,095,485 JBrowse link
G Slc4a8 solute carrier family 4 member 8 acts_upstream_of_or_within
involved_in
ISO
IBA
IDA
(PMID:11133997), (PMID:18577713)
(PMID:21593314)
GO_REF:0000033
PMID:8189393
RGD
GO_Central
PMID:11133997 PMID:18577713 PMID:21593314 PMID:8189393 GO_REF:0000033, RGD:155230769 NCBI chr 7:131,861,284...131,939,295 JBrowse link
G Slc4a9 solute carrier family 4 member 9 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr18:28,128,740...28,144,554 JBrowse link
G Slc9a1 solute carrier family 9 member A1 involved_in IMP
IBA
ISS
ISO
GO_REF:0000033
GO_REF:0000024
(PMID:15035633), (PMID:24840010)
GO_Central
UniProt
RGD
PMID:15035633 PMID:24840010 PMID:22387884 GO_REF:0000024 GO_REF:0000033, RGD:6771326 NCBI chr 5:145,576,341...145,629,630 JBrowse link
G Slc9a2 solute carrier family 9 member A2 involved_in IBA
ISO
GO_REF:0000033
(PMID:34985202)
GO_Central
RGD
PMID:34985202 GO_REF:0000033 NCBI chr 9:42,932,001...43,014,447 JBrowse link
G Slc9a3 solute carrier family 9 member A3 involved_in ISO
IBA
IEA
(PMID:35613257)
GO_REF:0000033
GO_REF:0000107
RGD
GO_Central
Ensembl
PMID:35613257 GO_REF:0000033 GO_REF:0000107 NCBI chr 1:29,124,633...29,167,912 JBrowse link
G Slc9a4 solute carrier family 9 member A4 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr 9:50,320,948...50,375,336 JBrowse link
G Slc9a5 solute carrier family 9 member A5 involved_in ISS
IBA
ISO
GO_REF:0000024
GO_REF:0000033
(PMID:24936055)
UniProt
GO_Central
RGD
PMID:24936055 GO_REF:0000024 GO_REF:0000033 NCBI chr19:33,225,481...33,246,913 JBrowse link
G Slc9a6 solute carrier family 9 member A6 involved_in ISO
IBA
(PMID:28635961), (PMID:30296617)
(PMID:17005858)
GO_REF:0000033
RGD
GO_Central
PMID:17005858 PMID:28635961 PMID:30296617 GO_REF:0000033 NCBI chr  X:139,468,045...139,524,111 JBrowse link
G Slc9a7 solute carrier family 9 member A7 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr  X:2,214,064...2,395,052 JBrowse link
G Slc9a8 solute carrier family 9 member A8 involved_in IDA
ISO
IBA
PMID:22088432
(PMID:29958869)
GO_REF:0000033
(PMID:34288721)
RGD
GO_Central
PMID:29958869 PMID:34288721 PMID:22088432 GO_REF:0000033, RGD:155663543 NCBI chr 3:156,147,855...156,198,497 JBrowse link
G Slc9a9 solute carrier family 9 member A9 involved_in ISS
ISO
IBA
GO_REF:0000024
(PMID:17005858), (PMID:35716776)
GO_REF:0000033
(PMID:15522866), (PMID:24065030)
UniProt
RGD
GO_Central
PMID:15522866 PMID:17005858 PMID:24065030 PMID:35716776 GO_REF:0000024 GO_REF:0000033 NCBI chr 8:104,112,279...104,675,944 JBrowse link
G Slc9b1 solute carrier family 9 member B1 involved_in ISO (PMID:20036903) RGD PMID:20036903 NCBI chr 2:226,442,892...226,502,966 JBrowse link
G Slc9c1 solute carrier family 9 member C1 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr11:55,211,774...55,278,285 JBrowse link
G Slc9c2 solute carrier family 9, member C2 (putative) involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr13:73,424,683...73,524,244 JBrowse link
G Tm9sf4 transmembrane 9 superfamily member 4 involved_in ISO
IEA
(PMID:19893578)
GO_REF:0000107
RGD
Ensembl
PMID:19893578 GO_REF:0000107 NCBI chr 3:141,627,128...141,675,386 JBrowse link
G Tp53 tumor protein p53 IMP RGD PMID:16688778 RGD:1598619 NCBI chr10:54,798,871...54,810,300 JBrowse link
regulation of lysosomal lumen pH term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Lrrk2 leucine-rich repeat kinase 2 involved_in ISO (PMID:22012985) RGD PMID:22012985 NCBI chr 7:124,706,246...124,867,234 JBrowse link
G Spns1 SPNS lysolipid transporter 1, lysophospholipid involved_in
acts_upstream_of_or_within
IEA
ISO
GO_REF:0000107
(PMID:36161949)
Ensembl
RGD
PMID:36161949 GO_REF:0000107 NCBI chr 1:180,942,088...180,949,415 JBrowse link
G Tasl TLR adaptor interacting with endolysosomal SLC15A4 involved_in ISO
IBA
(PMID:31001245)
GO_REF:0000033
RGD
GO_Central
PMID:31001245 GO_REF:0000033 NCBI chr  X:50,403,962...50,423,141 JBrowse link
G Tmem165 transmembrane protein 165 involved_in ISO
ISS
(PMID:23569283)
GO_REF:0000024
RGD
UniProt
PMID:23569283 GO_REF:0000024 NCBI chr14:31,993,489...32,018,717 JBrowse link
G Tmem175 transmembrane protein 175 involved_in ISS
ISO
GO_REF:0000024
(PMID:26317472)
(PMID:35750034)
UniProt
RGD
PMID:26317472 PMID:35750034 GO_REF:0000024 NCBI chr14:1,073,410...1,089,764 JBrowse link
G Vps33a VPS33A core subunit of CORVET and HOPS complexes involved_in ISO
IEA
ISS
(PMID:28013294)
GO_REF:0000107
GO_REF:0000024
RGD
Ensembl
UniProt
PMID:28013294 GO_REF:0000024 GO_REF:0000107 NCBI chr12:33,024,596...33,051,399 JBrowse link
vacuolar acidification term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Atp6v0a1 ATPase H+ transporting V0 subunit a1 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr10:85,935,802...85,989,901 JBrowse link
G Atp6v0a4 ATPase H+ transporting V0 subunit a4 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr 4:67,727,145...67,809,092 JBrowse link
G Atp6v0d1 ATPase H+ transporting V0 subunit D1 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr19:33,403,352...33,447,357 JBrowse link
G Atp6v0d2 ATPase H+ transporting V0 subunit D2 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr 5:33,336,257...33,385,354 JBrowse link
G Atp6v1b1 ATPase H+ transporting V1 subunit B1 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr 4:117,781,444...117,800,103 JBrowse link
G Atp6v1b2 ATPase H+ transporting V1 subunit B2 involved_in TAS
IBA
GO_REF:0000033 GO_Central
RGD
PMID:15013950 GO_REF:0000033, RGD:1304309 NCBI chr16:20,617,515...20,641,651 JBrowse link
G Clic4 chloride intracellular channel 4 involved_in
acts_upstream_of_or_within
IEA
ISO
GO_REF:0000107
MGI:3838012 (PMID:19197003)
Ensembl
RGD
PMID:19197003 GO_REF:0000107 NCBI chr 5:147,453,702...147,513,455 JBrowse link
G Dmxl1 Dmx-like 1 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr18:42,993,292...43,163,457 JBrowse link
G Dmxl2 Dmx-like 2 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr 8:54,741,164...54,884,948 JBrowse link
G Slc11a1 solute carrier family 11 member 1 involved_in
acts_upstream_of_or_within
IEA
ISO
GO_REF:0000107
MGI:2446573 (PMID:11067873), (PMID:18984740), (PMID:9670047)
Ensembl
RGD
PMID:9670047 PMID:11067873 PMID:18984740 GO_REF:0000107 NCBI chr 9:75,957,193...75,968,115 JBrowse link
G Tcirg1 T-cell immune regulator 1, ATPase H+ transporting V0 subunit A3 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr 1:210,556,270...210,568,021 JBrowse link

Term paths to the root
Path 1
Term Annotations click to browse term
  biological_process 20534
    biological regulation 13821
      regulation of pH 107
        pH elevation 1
        pH reduction 7
        regulation of cellular pH + 92
Path 2
Term Annotations click to browse term
  biological_process 20534
    homeostatic process 2014
      chemical homeostasis 1225
        monoatomic ion homeostasis 680
          monoatomic cation homeostasis 666
            regulation of pH 107
              pH elevation 1
              pH reduction 7
              regulation of cellular pH + 92
paths to the root