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ONTOLOGY REPORT - ANNOTATIONS

Term:membrane lipid metabolic process
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Accession:GO:0006643 term browser browse the term
Definition:The chemical reactions and pathways involving membrane lipids, any lipid found in or associated with a biological membrane.
Synonyms:exact_synonym: membrane lipid metabolism

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membrane lipid metabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Agmo alkylglycerol monooxygenase involved_in IEA Ensembl
TreeGrafter		 GO_REF:0000107 GO_REF:0000118 NCBI chrNW_004936546:1,993,477...2,179,623
Ensembl chrNW_004936546:1,855,801...2,179,461 		JBrowse link
G Cnpy4 canopy FGF signaling regulator 4 acts_upstream_of_or_within ISO (PMID:35504891) MGI PMID:35504891 NCBI chrNW_004936543:256,656...261,245
Ensembl chrNW_004936543:256,663...261,216 		JBrowse link
G Psap prosaposin acts_upstream_of_or_within ISO (PMID:14684827) MGI PMID:14684827 NCBI chrNW_004936521:6,975,844...7,009,460
Ensembl chrNW_004936521:6,975,770...7,009,136 		JBrowse link
3-keto-sphinganine metabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Kdsr 3-ketodihydrosphingosine reductase involved_in
acts_upstream_of_or_within 		IEA InterPro
Ensembl
TreeGrafter		 GO_REF:0000002 GO_REF:0000107 GO_REF:0000118 NCBI chrNW_004936497:2,169,982...2,199,600
Ensembl chrNW_004936497:2,169,712...2,203,150 		JBrowse link
ceramide biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ace2 angiotensin converting enzyme 2 acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chrNW_004936470:4,964,526...5,011,808
Ensembl chrNW_004936470:4,965,332...5,011,702 		JBrowse link
G Agk acylglycerol kinase involved_in
acts_upstream_of_or_within 		IEA TreeGrafter
Ensembl		 GO_REF:0000107 GO_REF:0000118 NCBI chrNW_004936592:5,454,860...5,531,285
Ensembl chrNW_004936592:5,457,582...5,531,000 		JBrowse link
G Alox12b arachidonate 12-lipoxygenase, 12R type involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936595:1,310,556...1,321,974
Ensembl chrNW_004936595:1,310,534...1,321,985 		JBrowse link
G Aloxe3 arachidonate epidermal lipoxygenase 3 involved_in
acts_upstream_of_or_within 		IEA
ISO 		(PMID:22832496) Ensembl
MGI		 PMID:22832496 GO_REF:0000107 NCBI chrNW_004936595:1,329,492...1,350,914
Ensembl chrNW_004936595:1,329,435...1,350,923 		JBrowse link
G Asah1 N-acylsphingosine amidohydrolase 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936554:104,666...141,761
Ensembl chrNW_004936554:104,229...141,512 		JBrowse link
G Asah2 N-acylsphingosine amidohydrolase 2 involved_in IEA Ensembl
UniProt		 GO_REF:0000107 GO_REF:0000117 NCBI chrNW_004936735:2,004,373...2,092,501
Ensembl chrNW_004936735:2,031,844...2,092,347 		JBrowse link
G Casp7 caspase 7 acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chrNW_004936486:4,082,664...4,114,942
Ensembl chrNW_004936486:4,088,372...4,114,955 		JBrowse link
G Cers1 ceramide synthase 1 involved_in IEA InterPro
Ensembl
TreeGrafter
UniProt		 GO_REF:0000002 GO_REF:0000107 GO_REF:0000117 GO_REF:0000118 NCBI chrNW_004936596:2,442,978...2,467,184
Ensembl chrNW_004936596:2,442,991...2,467,184 		JBrowse link
G Cers2 ceramide synthase 2 involved_in
acts_upstream_of_or_within 		IEA InterPro
Ensembl
TreeGrafter
UniProt		 GO_REF:0000002 GO_REF:0000107 GO_REF:0000117 GO_REF:0000118 NCBI chrNW_004936580:1,192,843...1,201,863
Ensembl chrNW_004936580:1,192,847...1,201,909 		JBrowse link
G Cers4 ceramide synthase 4 involved_in
acts_upstream_of_or_within 		IEA InterPro
Ensembl
TreeGrafter
UniProt		 GO_REF:0000002 GO_REF:0000107 GO_REF:0000117 GO_REF:0000118 NCBI chrNW_004936588:5,121,645...5,128,774
Ensembl chrNW_004936588:5,107,663...5,131,140 		JBrowse link
G Cers5 ceramide synthase 5 involved_in IEA InterPro
TreeGrafter
UniProt
Ensembl		 GO_REF:0000002 GO_REF:0000107 GO_REF:0000117 GO_REF:0000118 NCBI chrNW_004936512:7,780,212...7,809,182
Ensembl chrNW_004936512:7,780,153...7,809,188 		JBrowse link
G Cers6 ceramide synthase 6 involved_in
acts_upstream_of_or_within 		IEA
ISO 		(PMID:15823095) InterPro
TreeGrafter
MGI
UniProt
Ensembl		 PMID:15823095 GO_REF:0000002 GO_REF:0000107 GO_REF:0000117 GO_REF:0000118 NCBI chrNW_004936469:10,735,327...11,027,019
Ensembl chrNW_004936469:10,740,601...11,027,067 		JBrowse link
G Degs1 delta 4-desaturase, sphingolipid 1 acts_upstream_of_or_within
involved_in 		ISO
IEA 		(PMID:22984457) MGI
TreeGrafter		 PMID:22984457 GO_REF:0000118 NCBI chrNW_004936526:1,149,984...1,153,632
Ensembl chrNW_004936526:1,135,662...1,155,512 		JBrowse link
G Degs2 delta 4-desaturase, sphingolipid 2 involved_in
acts_upstream_of_or_within 		IEA
ISO 		(PMID:16571104) TreeGrafter
MGI		 PMID:16571104 GO_REF:0000118 NCBI chrNW_004936604:3,821,672...3,839,975
Ensembl chrNW_004936604:3,817,886...3,839,986 		JBrowse link
G Elovl1 ELOVL fatty acid elongase 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936474:24,765,173...24,769,903
Ensembl chrNW_004936474:24,764,718...24,769,947 		JBrowse link
G Fa2h fatty acid 2-hydroxylase involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936475:23,625,023...23,675,211
Ensembl chrNW_004936475:23,624,969...23,675,235 		JBrowse link
G Gba1 glucosylceramidase beta 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936580:4,715,869...4,720,752
Ensembl chrNW_004936580:4,715,408...4,720,798 		JBrowse link
G Gsdmd gasdermin D acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chrNW_004936470:8,567,085...8,571,448
Ensembl chrNW_004936470:8,567,091...8,571,467 		JBrowse link
G Kdsr 3-ketodihydrosphingosine reductase involved_in ISO (PMID:16120614) UOS_MCB PMID:16120614 NCBI chrNW_004936497:2,169,982...2,199,600
Ensembl chrNW_004936497:2,169,712...2,203,150 		JBrowse link
G LOC101954543 caspase-1-like acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chrNW_004936551:3,230,060...3,240,496 JBrowse link
G LOC101955719 sphingomyelin phosphodiesterase 5 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936470:8,139,207...8,142,061
Ensembl chrNW_004936470:8,139,615...8,141,716 		JBrowse link
G LOC101958833 ceramide synthase 3 involved_in IEA InterPro
Ensembl
TreeGrafter
UniProt		 GO_REF:0000002 GO_REF:0000107 GO_REF:0000117 GO_REF:0000118 NCBI chrNW_004936483:3,276,519...3,365,054
Ensembl chrNW_004936483:3,206,110...3,229,939
Ensembl chrNW_004936483:3,206,110...3,229,939 		JBrowse link
G LOC101967158 serine palmitoyltransferase 2 involved_in
acts_upstream_of_or_within 		IEA TreeGrafter
Ensembl		 GO_REF:0000107 GO_REF:0000118 NCBI chrNW_004936488:6,313,189...6,404,425
Ensembl chrNW_004936488:6,289,833...6,296,849
Ensembl chrNW_004936488:6,289,833...6,296,849 		JBrowse link
G LOC101977389 cytochrome P450 4F22 involved_in IEA Ensembl
TreeGrafter		 GO_REF:0000107 GO_REF:0000118 NCBI chrNW_004936596:4,987,577...5,006,459
Ensembl chrNW_004936596:4,984,831...5,006,622 		JBrowse link
G Mecr mitochondrial trans-2-enoyl-CoA reductase acts_upstream_of IEA Ensembl GO_REF:0000107 NCBI chrNW_004936474:13,146,572...13,183,707
Ensembl chrNW_004936474:13,147,938...13,183,770 		JBrowse link
G P2rx1 purinergic receptor P2X 1 acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chrNW_004936677:530,338...546,742
Ensembl chrNW_004936677:530,330...548,180 		JBrowse link
G P2rx7 purinergic receptor P2X 7 acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chrNW_004936558:3,106,819...3,149,689
Ensembl chrNW_004936558:3,108,283...3,149,765 		JBrowse link
G Pnpla1 patatin like domain 1, omega-hydroxyceramide transacylase involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936476:23,066,840...23,100,126
Ensembl chrNW_004936476:23,061,854...23,099,720 		JBrowse link
G Prf1 perforin 1 acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chrNW_004936521:8,057,874...8,060,695
Ensembl chrNW_004936521:8,057,874...8,060,695 		JBrowse link
G Samd8 sterile alpha motif domain containing 8 acts_upstream_of_or_within
involved_in 		ISO
IEA 		(PMID:25605874), (PMID:25667419)
(PMID:25667419) 		MGI
UniProt
Ensembl
TreeGrafter		 PMID:25605874 PMID:25667419 GO_REF:0000107 GO_REF:0000117 GO_REF:0000118 NCBI chrNW_004936521:4,170,016...4,229,877
Ensembl chrNW_004936521:4,169,979...4,229,890 		JBrowse link
G Sgms1 sphingomyelin synthase 1 involved_in
acts_upstream_of_or_within 		IEA TreeGrafter
Ensembl		 GO_REF:0000107 GO_REF:0000118 NCBI chrNW_004936735:1,702,754...1,984,141
Ensembl chrNW_004936735:1,943,352...1,984,141 		JBrowse link
G Sgms2 sphingomyelin synthase 2 involved_in
acts_upstream_of_or_within 		IEA TreeGrafter
Ensembl		 GO_REF:0000107 GO_REF:0000118 NCBI chrNW_004936818:687,695...726,123
Ensembl chrNW_004936818:683,659...726,174 		JBrowse link
G Smpd1 sphingomyelin phosphodiesterase 1 involved_in ISO
IEA 		RGD
TreeGrafter
UniProt
Ensembl		 PMID:17261082 GO_REF:0000107 GO_REF:0000117 GO_REF:0000118 RGD:1601344 NCBI chrNW_004936842:448,315...452,557
Ensembl chrNW_004936842:447,991...452,630 		JBrowse link
G Smpd2 sphingomyelin phosphodiesterase 2 ISO RGD PMID:12473648 RGD:1581395 NCBI chrNW_004936564:5,565,205...5,568,474
Ensembl chrNW_004936564:5,564,784...5,568,956 		JBrowse link
G Smpd4 sphingomyelin phosphodiesterase 4 involved_in IEA Ensembl
TreeGrafter		 GO_REF:0000107 GO_REF:0000118 NCBI chrNW_004936619:2,647,880...2,676,371
Ensembl chrNW_004936619:2,647,967...2,676,488 		JBrowse link
G Sptlc1 serine palmitoyltransferase long chain base subunit 1 involved_in
acts_upstream_of_or_within 		IEA TreeGrafter
Ensembl		 GO_REF:0000107 GO_REF:0000118 NCBI chrNW_004936796:886,946...948,254
Ensembl chrNW_004936796:886,922...948,254 		JBrowse link
G Sptlc3 serine palmitoyltransferase long chain base subunit 3 involved_in IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004936485:6,647,930...6,784,792
Ensembl chrNW_004936485:6,644,188...6,784,828 		JBrowse link
G Sptssa serine palmitoyltransferase small subunit A involved_in
acts_upstream_of_or_within 		IEA TreeGrafter
Ensembl		 GO_REF:0000107 GO_REF:0000118 NCBI chrNW_004936494:8,717,821...8,738,923
Ensembl chrNW_004936494:8,716,829...8,739,066 		JBrowse link
G Sptssb serine palmitoyltransferase small subunit B involved_in
acts_upstream_of_or_within 		IEA TreeGrafter
Ensembl		 GO_REF:0000107 GO_REF:0000118 NCBI chrNW_004936708:1,270,720...1,301,493
Ensembl chrNW_004936708:1,271,190...1,271,420 		JBrowse link
G Tlcd3b TLC domain containing 3B involved_in
acts_upstream_of_or_within 		IEA TreeGrafter
Ensembl		 GO_REF:0000107 GO_REF:0000118 NCBI chrNW_004936501:12,435,058...12,450,961
Ensembl chrNW_004936501:12,435,051...12,450,675 		JBrowse link
ceramide catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Acer1 alkaline ceramidase 1 involved_in
acts_upstream_of_or_within 		IEA TreeGrafter
Ensembl		 GO_REF:0000107 GO_REF:0000118 NCBI chrNW_004936588:3,688,244...3,705,831
Ensembl chrNW_004936588:3,688,244...3,705,831 		JBrowse link
G Acer2 alkaline ceramidase 2 involved_in IEA Ensembl
TreeGrafter		 GO_REF:0000107 GO_REF:0000118 NCBI chrNW_004936652:1,289,445...1,329,236
Ensembl chrNW_004936652:1,289,382...1,329,409 		JBrowse link
G Acer3 alkaline ceramidase 3 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936498:5,496,991...5,653,206
Ensembl chrNW_004936498:5,496,991...5,653,206 		JBrowse link
G Asah1 N-acylsphingosine amidohydrolase 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936554:104,666...141,761
Ensembl chrNW_004936554:104,229...141,512 		JBrowse link
G Asah2 N-acylsphingosine amidohydrolase 2 involved_in IEA InterPro
UniProt
TreeGrafter
Ensembl		 GO_REF:0000002 GO_REF:0000107 GO_REF:0000117 GO_REF:0000118 NCBI chrNW_004936735:2,004,373...2,092,501
Ensembl chrNW_004936735:2,031,844...2,092,347 		JBrowse link
G Cel carboxyl ester lipase acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chrNW_004936487:19,463,219...19,472,029
Ensembl chrNW_004936487:19,463,182...19,469,900 		JBrowse link
ceramide metabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Abca12 ATP binding cassette subfamily A member 12 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936586:1,938,617...2,094,231
Ensembl chrNW_004936586:1,938,617...2,094,279 		JBrowse link
G Acer1 alkaline ceramidase 1 involved_in IEA InterPro GO_REF:0000002 NCBI chrNW_004936588:3,688,244...3,705,831
Ensembl chrNW_004936588:3,688,244...3,705,831 		JBrowse link
G Acer2 alkaline ceramidase 2 involved_in IEA InterPro GO_REF:0000002 NCBI chrNW_004936652:1,289,445...1,329,236
Ensembl chrNW_004936652:1,289,382...1,329,409 		JBrowse link
G Acer3 alkaline ceramidase 3 involved_in IEA InterPro GO_REF:0000002 NCBI chrNW_004936498:5,496,991...5,653,206
Ensembl chrNW_004936498:5,496,991...5,653,206 		JBrowse link
G Asah2 N-acylsphingosine amidohydrolase 2 involved_in ISO (PMID:26190575) UniProt PMID:26190575 NCBI chrNW_004936735:2,004,373...2,092,501
Ensembl chrNW_004936735:2,031,844...2,092,347 		JBrowse link
G Cerk ceramide kinase involved_in IEA Ensembl
TreeGrafter		 GO_REF:0000107 GO_REF:0000118 NCBI chrNW_004936629:3,304,236...3,346,264
Ensembl chrNW_004936629:3,304,236...3,344,136 		JBrowse link
G Cert1 ceramide transporter 1 acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chrNW_004936549:1,261,913...1,368,743
Ensembl chrNW_004936549:1,261,931...1,371,380 		JBrowse link
G Cln8 CLN8 transmembrane ER and ERGIC protein involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936615:993,092...999,976
Ensembl chrNW_004936615:985,634...1,003,172 		JBrowse link
G Fut7 fucosyltransferase 7 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936669:914,520...920,481
Ensembl chrNW_004936669:919,206...920,341 		JBrowse link
G LOC101955719 sphingomyelin phosphodiesterase 5 acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chrNW_004936470:8,139,207...8,142,061
Ensembl chrNW_004936470:8,139,615...8,141,716 		JBrowse link
G Ormdl1 ORMDL sphingolipid biosynthesis regulator 1 involved_in IEA Ensembl
UniProt		 GO_REF:0000104 GO_REF:0000107 NCBI chrNW_004936506:8,197,116...8,208,712
Ensembl chrNW_004936506:8,196,784...8,210,584 		JBrowse link
G Ormdl2 ORMDL sphingolipid biosynthesis regulator 2 involved_in IEA Ensembl
UniProt		 GO_REF:0000104 GO_REF:0000107 NCBI chrNW_004936646:280,745...283,488
Ensembl chrNW_004936646:280,661...287,144 		JBrowse link
G Ormdl3 ORMDL sphingolipid biosynthesis regulator 3 involved_in IEA Ensembl
UniProt		 GO_REF:0000104 GO_REF:0000107 NCBI chrNW_004936490:15,069,435...15,076,112
Ensembl chrNW_004936490:15,069,387...15,076,253 		JBrowse link
G Pla2g15 phospholipase A2 group XV acts_upstream_of_or_within
involved_in 		IEA Ensembl
UniProt		 GO_REF:0000107 GO_REF:0000117 NCBI chrNW_004936475:18,571,599...18,584,977
Ensembl chrNW_004936475:18,571,516...18,585,009 		JBrowse link
G Plpp1 phospholipid phosphatase 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936480:12,265,304...12,357,747
Ensembl chrNW_004936480:12,265,246...12,359,450 		JBrowse link
G Plpp2 phospholipid phosphatase 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936588:14,422...20,467
Ensembl chrNW_004936588:14,399...20,514 		JBrowse link
G Plpp3 phospholipid phosphatase 3 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936522:4,992,333...5,074,295
Ensembl chrNW_004936522:4,992,322...5,074,313 		JBrowse link
G Psap prosaposin acts_upstream_of_or_within ISO (PMID:15345707)
(PMID:17353235) 		MGI PMID:15345707 PMID:17353235 NCBI chrNW_004936521:6,975,844...7,009,460
Ensembl chrNW_004936521:6,975,770...7,009,136 		JBrowse link
G Sgpl1 sphingosine-1-phosphate lyase 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936521:7,850,370...7,899,998
Ensembl chrNW_004936521:7,848,972...7,900,041 		JBrowse link
G Smpd1 sphingomyelin phosphodiesterase 1 acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chrNW_004936842:448,315...452,557
Ensembl chrNW_004936842:447,991...452,630 		JBrowse link
G Smpd2 sphingomyelin phosphodiesterase 2 involved_in IEA Ensembl
UniProt		 GO_REF:0000107 GO_REF:0000117 NCBI chrNW_004936564:5,565,205...5,568,474
Ensembl chrNW_004936564:5,564,784...5,568,956 		JBrowse link
G Smpd3 sphingomyelin phosphodiesterase 3 acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chrNW_004936475:18,667,563...18,755,132
Ensembl chrNW_004936475:18,671,428...18,755,208 		JBrowse link
G St6galnac6 ST6 N-acetylgalactosaminide alpha-2,6-sialyltransferase 6 involved_in IEA UniProt GO_REF:0000117 NCBI chrNW_004936487:15,522,286...15,534,934
Ensembl chrNW_004936487:15,522,266...15,539,947 		JBrowse link
G Tm9sf2 transmembrane 9 superfamily member 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936472:10,946,263...11,006,311
Ensembl chrNW_004936472:10,945,906...11,006,324 		JBrowse link
ceramide phosphoethanolamine biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Samd8 sterile alpha motif domain containing 8 acts_upstream_of_or_within ISO (PMID:25667419) MGI PMID:25667419 NCBI chrNW_004936521:4,170,016...4,229,877
Ensembl chrNW_004936521:4,169,979...4,229,890 		JBrowse link
G Sgms2 sphingomyelin synthase 2 acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chrNW_004936818:687,695...726,123
Ensembl chrNW_004936818:683,659...726,174 		JBrowse link
ceramide phosphoethanolamine catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Etnppl ethanolamine-phosphate phospho-lyase acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chrNW_004936563:56,216...74,591
Ensembl chrNW_004936563:56,776...74,403 		JBrowse link
dolichol phosphate mannose biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Dolk dolichol kinase involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936487:16,406,385...16,408,546
Ensembl chrNW_004936487:16,406,529...16,408,145 		JBrowse link
G Dpm1 dolichyl-phosphate mannosyltransferase subunit 1, catalytic involved_in ISO (PMID:10835346) UniProt PMID:10835346 NCBI chrNW_004936514:3,832,284...3,850,064
Ensembl chrNW_004936514:3,832,272...3,851,829 		JBrowse link
G Dpm2 dolichyl-phosphate mannosyltransferase subunit 2, regulatory involved_in IEA InterPro
Ensembl		 GO_REF:0000002 GO_REF:0000107 NCBI chrNW_004936487:15,565,151...15,567,856
Ensembl chrNW_004936487:15,565,176...15,567,881 		JBrowse link
G Dpm3 dolichyl-phosphate mannosyltransferase subunit 3, regulatory involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936580:4,664,653...4,665,199
Ensembl chrNW_004936580:4,664,653...4,665,188 		JBrowse link
galactosylceramide biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G B3galt1 beta-1,3-galactosyltransferase 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936469:11,586,710...12,133,053
Ensembl chrNW_004936469:11,589,492...11,590,472 		JBrowse link
G B3galt2 beta-1,3-galactosyltransferase 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936638:1,424,641...1,434,266
Ensembl chrNW_004936638:1,426,044...1,433,660 		JBrowse link
G B4galt3 beta-1,4-galactosyltransferase 3 involved_in IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004936903:474,789...481,342
Ensembl chrNW_004936903:474,796...481,242 		JBrowse link
G Fa2h fatty acid 2-hydroxylase involved_in IEA Ensembl
UniProt		 GO_REF:0000107 GO_REF:0000117 NCBI chrNW_004936475:23,625,023...23,675,211
Ensembl chrNW_004936475:23,624,969...23,675,235 		JBrowse link
G Gal3st1 galactose-3-O-sulfotransferase 1 involved_in
acts_upstream_of_or_within 		IEA TreeGrafter
Ensembl		 GO_REF:0000107 GO_REF:0000118 NCBI chrNW_004936904:142,576...158,606
Ensembl chrNW_004936904:142,387...159,633 		JBrowse link
G LOC101958451 beta-1,4-galactosyltransferase 3-like involved_in IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004936777:613,513...614,960 JBrowse link
G Ugt8 UDP glycosyltransferase 8 involved_in IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004936563:5,251,451...5,305,683
Ensembl chrNW_004936563:5,224,173...5,306,120 		JBrowse link
galactosylceramide catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Galc galactosylceramidase involved_in
acts_upstream_of_or_within 		IEA InterPro
UniProt
Ensembl
TreeGrafter		 GO_REF:0000002 GO_REF:0000107 GO_REF:0000117 GO_REF:0000118 NCBI chrNW_004936488:15,444,184...15,519,395
Ensembl chrNW_004936488:15,444,801...15,518,856 		JBrowse link
G Psap prosaposin acts_upstream_of_or_within ISO (PMID:11371512) MGI PMID:11371512 NCBI chrNW_004936521:6,975,844...7,009,460
Ensembl chrNW_004936521:6,975,770...7,009,136 		JBrowse link
galactosylceramide metabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Gal3st1 galactose-3-O-sulfotransferase 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936904:142,576...158,606
Ensembl chrNW_004936904:142,387...159,633 		JBrowse link
ganglioside biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G B3galt4 beta-1,3-galactosyltransferase 4 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936476:25,587,328...25,589,081
Ensembl chrNW_004936476:25,587,592...25,588,763 		JBrowse link
G B4galnt1 beta-1,4-N-acetyl-galactosaminyltransferase 1 involved_in
acts_upstream_of_or_within 		IEA TreeGrafter
Ensembl		 GO_REF:0000107 GO_REF:0000118 NCBI chrNW_004936646:1,770,412...1,777,152
Ensembl chrNW_004936646:1,770,930...1,777,173 		JBrowse link
G B4galt5 beta-1,4-galactosyltransferase 5 involved_in ISO (PMID:30114188) UniProt PMID:30114188 NCBI chrNW_004936514:4,719,198...4,736,638
Ensembl chrNW_004936514:4,719,052...4,736,635 		JBrowse link
G B4galt6 beta-1,4-galactosyltransferase 6 involved_in ISO (PMID:30114188) UniProt PMID:30114188 NCBI chrNW_004936682:1,535,617...1,590,723
Ensembl chrNW_004936682:1,535,586...1,593,827 		JBrowse link
G St3gal1 ST3 beta-galactoside alpha-2,3-sialyltransferase 1 involved_in ISO (PMID:8027041)
(PMID:8144500) 		UniProt PMID:8027041 PMID:8144500 NCBI chrNW_004936470:15,860,669...15,934,500
Ensembl chrNW_004936470:15,918,749...15,934,503 		JBrowse link
G St3gal2 ST3 beta-galactoside alpha-2,3-sialyltransferase 2 involved_in ISO (PMID:8920913)
(PMID:22735313)
(PMID:8144500) 		UniProt PMID:8144500 PMID:8920913 PMID:22735313 RGD:68307 NCBI chrNW_004936475:23,149,452...23,203,919
Ensembl chrNW_004936475:23,149,487...23,205,027 		JBrowse link
G St3gal3 ST3 beta-galactoside alpha-2,3-sialyltransferase 3 involved_in ISO (PMID:22735313) UniProt PMID:22735313 NCBI chrNW_004936474:25,058,892...25,248,378
Ensembl chrNW_004936474:25,058,892...25,248,378 		JBrowse link
G St6galnac3 ST6 N-acetylgalactosaminide alpha-2,6-sialyltransferase 3 involved_in IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004936571:3,064,150...3,572,992
Ensembl chrNW_004936571:3,064,179...3,574,202 		JBrowse link
G St6galnac4 ST6 N-acetylgalactosaminide alpha-2,6-sialyltransferase 4 involved_in IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004936487:15,541,994...15,551,245
Ensembl chrNW_004936487:15,541,735...15,551,305 		JBrowse link
G St6galnac5 ST6 N-acetylgalactosaminide alpha-2,6-sialyltransferase 5 involved_in IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004936571:3,815,867...3,971,219
Ensembl chrNW_004936571:3,815,823...3,973,328 		JBrowse link
G St6galnac6 ST6 N-acetylgalactosaminide alpha-2,6-sialyltransferase 6 acts_upstream_of_or_within
involved_in 		ISO
IEA 		(PMID:10702226) MGI
TreeGrafter		 PMID:10702226 GO_REF:0000118 NCBI chrNW_004936487:15,522,286...15,534,934
Ensembl chrNW_004936487:15,522,266...15,539,947 		JBrowse link
G St8sia2 ST8 alpha-N-acetyl-neuraminide alpha-2,8-sialyltransferase 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936483:10,278,843...10,343,177
Ensembl chrNW_004936483:10,278,838...10,313,905 		JBrowse link
G St8sia3 ST8 alpha-N-acetyl-neuraminide alpha-2,8-sialyltransferase 3 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936497:6,955,973...6,962,952
Ensembl chrNW_004936497:6,955,857...6,963,117 		JBrowse link
G St8sia4 ST8 alpha-N-acetyl-neuraminide alpha-2,8-sialyltransferase 4 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936523:3,270,776...3,363,114
Ensembl chrNW_004936523:3,270,718...3,365,668 		JBrowse link
G St8sia6 ST8 alpha-N-acetyl-neuraminide alpha-2,8-sialyltransferase 6 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936520:9,869,166...9,990,205
Ensembl chrNW_004936520:9,869,195...9,988,541 		JBrowse link
ganglioside catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Glb1 galactosidase beta 1 involved_in IEA Ensembl
UniProt		 GO_REF:0000107 GO_REF:0000117 NCBI chrNW_004936473:23,348,431...23,440,271
Ensembl chrNW_004936473:23,348,416...23,440,196 		JBrowse link
G Gm2a GM2 ganglioside activator involved_in
acts_upstream_of_or_within 		IEA InterPro
Ensembl
TreeGrafter		 GO_REF:0000002 GO_REF:0000107 GO_REF:0000118 NCBI chrNW_004936647:4,126,524...4,140,800
Ensembl chrNW_004936647:4,126,577...4,140,786 		JBrowse link
G Hexa hexosaminidase subunit alpha involved_in
acts_upstream_of_or_within 		IEA TreeGrafter
Ensembl		 GO_REF:0000107 GO_REF:0000118 NCBI chrNW_004936471:31,712,485...31,738,273
Ensembl chrNW_004936471:31,709,491...31,738,245 		JBrowse link
G Hexb hexosaminidase subunit beta involved_in
acts_upstream_of_or_within 		IEA TreeGrafter
Ensembl		 GO_REF:0000107 GO_REF:0000118 NCBI chrNW_004936549:1,918,482...1,943,665
Ensembl chrNW_004936549:1,917,327...1,943,691 		JBrowse link
G Neu1 neuraminidase 1 involved_in IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004936727:1,683,283...1,687,130
Ensembl chrNW_004936727:1,683,204...1,688,883 		JBrowse link
G Neu2 neuraminidase 2 involved_in IEA TreeGrafter
Ensembl		 GO_REF:0000107 GO_REF:0000118 NCBI chrNW_004936525:4,177,085...4,179,692
Ensembl chrNW_004936525:4,177,085...4,179,692 		JBrowse link
G Neu3 neuraminidase 3 involved_in IEA Ensembl
TreeGrafter		 GO_REF:0000107 GO_REF:0000118 NCBI chrNW_004936498:3,897,511...3,915,013
Ensembl chrNW_004936498:3,897,485...3,910,115 		JBrowse link
G Neu4 neuraminidase 4 involved_in ISO (PMID:15213228), (PMID:15847605)
(PMID:19506080) 		UniProt PMID:15213228 PMID:15847605 PMID:19506080 NCBI chrNW_004936745:172,983...175,470 JBrowse link
ganglioside metabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Abca2 ATP binding cassette subfamily A member 2 involved_in ISO (PMID:17488728) UniProt PMID:17488728 NCBI chrNW_004936669:922,978...941,996
Ensembl chrNW_004936669:926,622...942,167 		JBrowse link
G Cln6 CLN6 transmembrane ER protein involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936471:28,069,058...28,084,607
Ensembl chrNW_004936471:28,070,462...28,084,648 		JBrowse link
G Gm2a GM2 ganglioside activator ISO RGD PMID:9770472 RGD:1598995 NCBI chrNW_004936647:4,126,524...4,140,800
Ensembl chrNW_004936647:4,126,577...4,140,786 		JBrowse link
G Itgb8 integrin subunit beta 8 acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chrNW_004936546:6,352,186...6,447,458
Ensembl chrNW_004936546:6,353,986...6,442,756 		JBrowse link
G Naglu N-acetyl-alpha-glucosaminidase acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chrNW_004936490:17,305,033...17,312,167
Ensembl chrNW_004936490:17,304,586...17,314,521 		JBrowse link
globoside biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G A4galt alpha 1,4-galactosyltransferase (P1PK blood group) acts_upstream_of_or_within ISO (PMID:16476743)
(PMID:22875802) 		MGI PMID:16476743 PMID:22875802 NCBI chrNW_004936718:594,462...630,926 JBrowse link
G Plekha8 pleckstrin homology domain containing A8 involved_in ISO (PMID:23913272) UOS_MCB PMID:23913272 NCBI chrNW_004936478:6,312,432...6,366,159
Ensembl chrNW_004936478:6,312,426...6,359,146 		JBrowse link
G St3gal2 ST3 beta-galactoside alpha-2,3-sialyltransferase 2 involved_in ISO (PMID:12716912) UniProt PMID:12716912 NCBI chrNW_004936475:23,149,452...23,203,919
Ensembl chrNW_004936475:23,149,487...23,205,027 		JBrowse link
globoside metabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Gbgt1 globoside alpha-1,3-N-acetylgalactosaminyltransferase 1 (FORS blood group) involved_in ISO (PMID:8855242) UniProt PMID:8855242 NCBI chrNW_004936487:19,520,232...19,529,199
Ensembl chrNW_004936487:19,519,092...19,529,102 		JBrowse link
glucosylceramide biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Fa2h fatty acid 2-hydroxylase involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936475:23,625,023...23,675,211
Ensembl chrNW_004936475:23,624,969...23,675,235 		JBrowse link
G Ugcg UDP-glucose ceramide glucosyltransferase involved_in IEA Ensembl
TreeGrafter		 GO_REF:0000107 GO_REF:0000118 NCBI chrNW_004936559:1,475,684...1,513,273
Ensembl chrNW_004936559:1,475,592...1,513,273 		JBrowse link
glucosylceramide catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Gba1 glucosylceramidase beta 1 involved_in IEA Ensembl
UniProt
TreeGrafter		 GO_REF:0000107 GO_REF:0000117 GO_REF:0000118 NCBI chrNW_004936580:4,715,869...4,720,752
Ensembl chrNW_004936580:4,715,408...4,720,798 		JBrowse link
G Gba2 glucosylceramidase beta 2 involved_in IEA InterPro
UniProt
Ensembl		 GO_REF:0000002 GO_REF:0000107 GO_REF:0000117 NCBI chrNW_004936524:3,730,833...3,742,526
Ensembl chrNW_004936524:3,730,833...3,742,531 		JBrowse link
glucosylceramide metabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G B3galt1 beta-1,3-galactosyltransferase 1 involved_in ISO (PMID:9582303) BHF-UCL PMID:9582303 NCBI chrNW_004936469:11,586,710...12,133,053
Ensembl chrNW_004936469:11,589,492...11,590,472 		JBrowse link
G B3galt2 beta-1,3-galactosyltransferase 2 involved_in ISO (PMID:9582303) BHF-UCL PMID:9582303 NCBI chrNW_004936638:1,424,641...1,434,266
Ensembl chrNW_004936638:1,426,044...1,433,660 		JBrowse link
G B4galt3 beta-1,4-galactosyltransferase 3 involved_in ISO (PMID:9405390) BHF-UCL PMID:9405390 NCBI chrNW_004936903:474,789...481,342
Ensembl chrNW_004936903:474,796...481,242 		JBrowse link
G Gba1 glucosylceramidase beta 1 acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chrNW_004936580:4,715,869...4,720,752
Ensembl chrNW_004936580:4,715,408...4,720,798 		JBrowse link
G Psap prosaposin acts_upstream_of_or_within ISO (PMID:17353235) MGI PMID:17353235 NCBI chrNW_004936521:6,975,844...7,009,460
Ensembl chrNW_004936521:6,975,770...7,009,136 		JBrowse link
glycolipid biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Gal3st1 galactose-3-O-sulfotransferase 1 involved_in IEA InterPro GO_REF:0000002 NCBI chrNW_004936904:142,576...158,606
Ensembl chrNW_004936904:142,387...159,633 		JBrowse link
G Gal3st3 galactose-3-O-sulfotransferase 3 involved_in IEA InterPro GO_REF:0000002 NCBI chrNW_004936599:3,498,011...3,512,550
Ensembl chrNW_004936599:3,498,005...3,504,901 		JBrowse link
G Gal3st4 galactose-3-O-sulfotransferase 4 involved_in IEA InterPro GO_REF:0000002 NCBI chrNW_004936543:417,034...423,017
Ensembl chrNW_004936543:417,034...423,037 		JBrowse link
G Gba1 glucosylceramidase beta 1 involved_in ISO (PMID:24211208)
(PMID:24211208), (PMID:26724485) 		UniProt PMID:24211208 PMID:26724485 NCBI chrNW_004936580:4,715,869...4,720,752
Ensembl chrNW_004936580:4,715,408...4,720,798 		JBrowse link
G Gba2 glucosylceramidase beta 2 involved_in ISO (PMID:26724485) UniProt PMID:26724485 NCBI chrNW_004936524:3,730,833...3,742,526
Ensembl chrNW_004936524:3,730,833...3,742,531 		JBrowse link
G Sccpdh saccharopine dehydrogenase (putative) involved_in IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004936526:4,277,340...4,309,717
Ensembl chrNW_004936526:4,276,920...4,310,146 		JBrowse link
G Slc35c1 solute carrier family 35 member C1 acts_upstream_of_or_within_negative_effect ISO (PMID:18308723) MGI PMID:18308723 NCBI chrNW_004936562:3,190,955...3,198,858
Ensembl chrNW_004936562:3,190,962...3,198,884 		JBrowse link
G St3gal2 ST3 beta-galactoside alpha-2,3-sialyltransferase 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936475:23,149,452...23,203,919
Ensembl chrNW_004936475:23,149,487...23,205,027 		JBrowse link
G St3gal4 ST3 beta-galactoside alpha-2,3-sialyltransferase 4 involved_in IEA Ensembl
TreeGrafter		 GO_REF:0000107 GO_REF:0000118 NCBI chrNW_004936572:5,806,897...5,851,557
Ensembl chrNW_004936572:5,806,894...5,841,550 		JBrowse link
G St3gal6 ST3 beta-galactoside alpha-2,3-sialyltransferase 6 involved_in IEA TreeGrafter
Ensembl		 GO_REF:0000107 GO_REF:0000118 NCBI chrNW_004936630:4,226,539...4,281,064
Ensembl chrNW_004936630:4,226,115...4,280,969 		JBrowse link
G St8sia6 ST8 alpha-N-acetyl-neuraminide alpha-2,8-sialyltransferase 6 acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chrNW_004936520:9,869,166...9,990,205
Ensembl chrNW_004936520:9,869,195...9,988,541 		JBrowse link
G Ugt8 UDP glycosyltransferase 8 involved_in IEA UniProt GO_REF:0000117 NCBI chrNW_004936563:5,251,451...5,305,683
Ensembl chrNW_004936563:5,224,173...5,306,120 		JBrowse link
glycolipid catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Naga alpha-N-acetylgalactosaminidase involved_in IEA Ensembl
UniProt		 GO_REF:0000107 GO_REF:0000117 NCBI chrNW_004936718:31,946...55,822
Ensembl chrNW_004936718:37,135...48,893 		JBrowse link
glycolipid metabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ahdc1 AT-hook DNA binding motif containing 1 acts_upstream_of_or_within ISO (PMID:37819197) MGI PMID:37819197 NCBI chrNW_004936474:11,824,692...11,846,355
Ensembl chrNW_004936474:11,824,697...11,876,817 		JBrowse link
G Fut1 fucosyltransferase 1 (H blood group) involved_in ISO (PMID:14967068) UniProt PMID:14967068 NCBI chrNW_004936664:2,822,972...2,824,331
Ensembl chrNW_004936664:2,822,972...2,824,108 		JBrowse link
G LOC101974597 galactoside alpha-(1,2)-fucosyltransferase 2-like involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936664:2,727,163...2,729,094
Ensembl chrNW_004936664:2,727,663...2,728,688 		JBrowse link
G Mfsd8 major facilitator superfamily domain containing 8 acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chrNW_004936642:2,745,889...2,833,286
Ensembl chrNW_004936642:2,801,908...2,832,830 		JBrowse link
G Psap prosaposin acts_upstream_of_or_within ISO (PMID:12810822) MGI PMID:12810822 NCBI chrNW_004936521:6,975,844...7,009,460
Ensembl chrNW_004936521:6,975,770...7,009,136 		JBrowse link
glycosphingolipid biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G A3galt2 alpha 1,3-galactosyltransferase 2 involved_in
acts_upstream_of_or_within 		ISO
IEA 		PMID:12626403 RGD
UniProt
Ensembl		 PMID:10854427 PMID:12626403 GO_REF:0000107 RGD:1299594 RGD:632674 NCBI chrNW_004936474:16,135,076...16,138,930
Ensembl chrNW_004936474:16,135,644...16,145,518 		JBrowse link
G A4galt alpha 1,4-galactosyltransferase (P1PK blood group) involved_in IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004936718:594,462...630,926 JBrowse link
G B4galnt1 beta-1,4-N-acetyl-galactosaminyltransferase 1 involved_in ISO PMID:1606358 UniProt PMID:1606358 RGD:21201272 NCBI chrNW_004936646:1,770,412...1,777,152
Ensembl chrNW_004936646:1,770,930...1,777,173 		JBrowse link
G B4galt5 beta-1,4-galactosyltransferase 5 involved_in IEA UniProt GO_REF:0000117 NCBI chrNW_004936514:4,719,198...4,736,638
Ensembl chrNW_004936514:4,719,052...4,736,635 		JBrowse link
G B4galt6 beta-1,4-galactosyltransferase 6 involved_in ISO
IEA 		RGD
UniProt
TreeGrafter		 PMID:9593693 GO_REF:0000117 GO_REF:0000118 RGD:70807 NCBI chrNW_004936682:1,535,617...1,590,723
Ensembl chrNW_004936682:1,535,586...1,593,827 		JBrowse link
G Cers2 ceramide synthase 2 involved_in ISO (PMID:34080016) UOS_MCB PMID:34080016 NCBI chrNW_004936580:1,192,843...1,201,863
Ensembl chrNW_004936580:1,192,847...1,201,909 		JBrowse link
G Degs1 delta 4-desaturase, sphingolipid 1 involved_in ISO (PMID:34080016) UOS_MCB PMID:34080016 NCBI chrNW_004936526:1,149,984...1,153,632
Ensembl chrNW_004936526:1,135,662...1,155,512 		JBrowse link
G Fut4 fucosyltransferase 4 involved_in ISO (PMID:29593094) UniProt PMID:29593094 NCBI chrNW_004936674:418,751...428,998
Ensembl chrNW_004936674:419,808...421,925 		JBrowse link
G Fut9 fucosyltransferase 9 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936699:1,428,131...1,612,294
Ensembl chrNW_004936699:1,429,015...1,612,291 		JBrowse link
G Kdsr 3-ketodihydrosphingosine reductase involved_in ISO (PMID:34080016) UOS_MCB PMID:34080016 NCBI chrNW_004936497:2,169,982...2,199,600
Ensembl chrNW_004936497:2,169,712...2,203,150 		JBrowse link
G LOC101959611 lactosylceramide 4-alpha-galactosyltransferase involved_in IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004940934:7...1,878 JBrowse link
G St6galnac5 ST6 N-acetylgalactosaminide alpha-2,6-sialyltransferase 5 involved_in ISO (PMID:10521438) BHF-UCL PMID:10521438 NCBI chrNW_004936571:3,815,867...3,971,219
Ensembl chrNW_004936571:3,815,823...3,973,328 		JBrowse link
G St6galnac6 ST6 N-acetylgalactosaminide alpha-2,6-sialyltransferase 6 involved_in IEA UniProt GO_REF:0000117 NCBI chrNW_004936487:15,522,286...15,534,934
Ensembl chrNW_004936487:15,522,266...15,539,947 		JBrowse link
G St8sia5 ST8 alpha-N-acetyl-neuraminide alpha-2,8-sialyltransferase 5 involved_in ISO PMID:1606358 UniProt PMID:1606358 RGD:21201272 NCBI chrNW_004936517:186,465...262,622
Ensembl chrNW_004936517:186,452...253,513 		JBrowse link
G Tm9sf2 transmembrane 9 superfamily member 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936472:10,946,263...11,006,311
Ensembl chrNW_004936472:10,945,906...11,006,324 		JBrowse link
G Ugt8 UDP glycosyltransferase 8 involved_in ISO (PMID:34080016) UOS_MCB PMID:34080016 NCBI chrNW_004936563:5,251,451...5,305,683
Ensembl chrNW_004936563:5,224,173...5,306,120 		JBrowse link
glycosphingolipid catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Gla galactosidase alpha involved_in IEA
ISO 		Ensembl
UniProt
RGD		 PMID:34320241 GO_REF:0000107 GO_REF:0000117 RGD:401976418 NCBI chrNW_004936813:474,938...484,753
Ensembl chrNW_004936813:474,949...484,760 		JBrowse link
glycosphingolipid metabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Abca2 ATP binding cassette subfamily A member 2 involved_in ISO (PMID:17488728) UniProt PMID:17488728 NCBI chrNW_004936669:922,978...941,996
Ensembl chrNW_004936669:926,622...942,167 		JBrowse link
G B4galnt1 beta-1,4-N-acetyl-galactosaminyltransferase 1 acts_upstream_of_or_within
involved_in 		IEA
ISO 		PMID:3140234 Ensembl
UniProt		 PMID:3140234 GO_REF:0000107 RGD:21201261 NCBI chrNW_004936646:1,770,412...1,777,152
Ensembl chrNW_004936646:1,770,930...1,777,173 		JBrowse link
G Bax BCL2 associated X, apoptosis regulator acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chrNW_004936664:2,968,103...2,973,652
Ensembl chrNW_004936664:2,967,865...2,973,820 		JBrowse link
G Crem cAMP responsive element modulator acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chrNW_004936574:3,478,969...3,546,738
Ensembl chrNW_004936574:3,479,060...3,548,951 		JBrowse link
G Hexb hexosaminidase subunit beta acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chrNW_004936549:1,918,482...1,943,665
Ensembl chrNW_004936549:1,917,327...1,943,691 		JBrowse link
G Kit KIT proto-oncogene, receptor tyrosine kinase acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chrNW_004936482:17,162,854...17,238,319
Ensembl chrNW_004936482:17,162,950...17,238,274 		JBrowse link
G Map7 microtubule associated protein 7 acts_upstream_of_or_within ISO (PMID:18308723) MGI PMID:18308723 NCBI chrNW_004936560:3,811,021...3,958,007
Ensembl chrNW_004936560:3,816,209...3,872,488 		JBrowse link
G St6galnac3 ST6 N-acetylgalactosaminide alpha-2,6-sialyltransferase 3 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936571:3,064,150...3,572,992
Ensembl chrNW_004936571:3,064,179...3,574,202 		JBrowse link
G St6galnac6 ST6 N-acetylgalactosaminide alpha-2,6-sialyltransferase 6 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936487:15,522,286...15,534,934
Ensembl chrNW_004936487:15,522,266...15,539,947 		JBrowse link
glycosylceramide catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Gla galactosidase alpha acts_upstream_of_or_within ISO (PMID:10840053), (PMID:15629890)
(PMID:10841515), (PMID:11752062), (PMID:9122231) 		MGI PMID:9122231 PMID:10840053 PMID:10841515 PMID:11752062 PMID:15629890 NCBI chrNW_004936813:474,938...484,753
Ensembl chrNW_004936813:474,949...484,760 		JBrowse link
G Lct lactase involved_in ISO PMID:4752949 UniProt PMID:4752949 RGD:151356630 NCBI chrNW_004936469:40,064,822...40,108,423
Ensembl chrNW_004936469:40,064,822...40,107,447 		JBrowse link
G LOC101968782 cytosolic beta-glucosidase involved_in IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004936477:6,272,938...6,379,811
Ensembl chrNW_004936477:6,272,938...6,379,811 		JBrowse link
glycosylceramide metabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G St6galnac3 ST6 N-acetylgalactosaminide alpha-2,6-sialyltransferase 3 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936571:3,064,150...3,572,992
Ensembl chrNW_004936571:3,064,179...3,574,202 		JBrowse link
G St6galnac6 ST6 N-acetylgalactosaminide alpha-2,6-sialyltransferase 6 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936487:15,522,286...15,534,934
Ensembl chrNW_004936487:15,522,266...15,539,947 		JBrowse link
GPI anchor biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Cwh43 cell wall biogenesis 43 C-terminal homolog involved_in IEA TreeGrafter
UniProt		 GO_REF:0000043 GO_REF:0000118 NCBI chrNW_004936482:14,902,011...14,952,123
Ensembl chrNW_004936482:14,902,011...14,952,123 		JBrowse link
G Dpm1 dolichyl-phosphate mannosyltransferase subunit 1, catalytic acts_upstream_of_or_within
involved_in 		ISO
IEA 		(PMID:9535917), (PMID:9724629) MGI
UniProt
TreeGrafter		 PMID:9535917 PMID:9724629 GO_REF:0000117 GO_REF:0000118 NCBI chrNW_004936514:3,832,284...3,850,064
Ensembl chrNW_004936514:3,832,272...3,851,829 		JBrowse link
G Dpm2 dolichyl-phosphate mannosyltransferase subunit 2, regulatory acts_upstream_of_or_within
involved_in 		ISO
IEA 		PMID:9724629 MGI
TreeGrafter
Ensembl		 PMID:9724629 GO_REF:0000107 GO_REF:0000118 RGD:69827 NCBI chrNW_004936487:15,565,151...15,567,856
Ensembl chrNW_004936487:15,565,176...15,567,881 		JBrowse link
G Dpm3 dolichyl-phosphate mannosyltransferase subunit 3, regulatory involved_in IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004936580:4,664,653...4,665,199
Ensembl chrNW_004936580:4,664,653...4,665,188 		JBrowse link
G Gpaa1 glycosylphosphatidylinositol anchor attachment 1 involved_in IEA UniProt GO_REF:0000043 NCBI chrNW_004936470:8,092,758...8,096,277
Ensembl chrNW_004936470:8,092,855...8,096,074 		JBrowse link
G LOC101962300 phosphatidylinositol-glycan biosynthesis class F protein-like involved_in IEA UniProt
InterPro		 GO_REF:0000002 GO_REF:0000041 GO_REF:0000043 NCBI chrNW_004936547:469,426...470,884 JBrowse link
G Mppe1 metallophosphoesterase 1 involved_in IEA UniProt
Ensembl
InterPro		 GO_REF:0000002 GO_REF:0000043 GO_REF:0000107 GO_REF:0000117 NCBI chrNW_004936626:349,324...371,073
Ensembl chrNW_004936626:361,270...373,629 		JBrowse link
G Pgap1 post-GPI attachment to proteins inositol deacylase 1 ISO RGD PMID:14734546 RGD:1303970 NCBI chrNW_004936506:2,224,598...2,297,022
Ensembl chrNW_004936506:2,224,572...2,294,739 		JBrowse link
G Pgap2 post-GPI attachment to proteins 2 involved_in IEA Ensembl
TreeGrafter
UniProt		 GO_REF:0000043 GO_REF:0000107 GO_REF:0000118 NCBI chrNW_004936498:1,088,345...1,112,108
Ensembl chrNW_004936498:1,088,230...1,104,275 		JBrowse link
G Pgap3 post-GPI attachment to proteins phospholipase 3 involved_in IEA Ensembl
TreeGrafter
InterPro
UniProt		 GO_REF:0000002 GO_REF:0000043 GO_REF:0000107 GO_REF:0000118 NCBI chrNW_004936490:14,862,204...14,877,217
Ensembl chrNW_004936490:14,859,538...14,877,269 		JBrowse link
G Pgap4 post-GPI attachment to proteins GalNAc transferase 4 involved_in IEA Ensembl
TreeGrafter
InterPro		 GO_REF:0000002 GO_REF:0000107 GO_REF:0000118 NCBI chrNW_004936524:9,627,945...9,640,026
Ensembl chrNW_004936524:9,627,945...9,640,031 		JBrowse link
G Piga phosphatidylinositol glycan anchor biosynthesis class A involved_in
acts_upstream_of_or_within 		IEA InterPro
Ensembl
TreeGrafter
UniProt		 GO_REF:0000002 GO_REF:0000041 GO_REF:0000043 GO_REF:0000107 GO_REF:0000118 NCBI chrNW_004936470:4,730,955...4,746,958
Ensembl chrNW_004936470:4,730,961...4,746,985 		JBrowse link
G Pigb phosphatidylinositol glycan anchor biosynthesis class B involved_in IEA Ensembl
TreeGrafter		 GO_REF:0000107 GO_REF:0000118 NCBI chrNW_004936471:16,828,910...16,857,140
Ensembl chrNW_004936471:16,829,159...16,861,536 		JBrowse link
G Pigc phosphatidylinositol glycan anchor biosynthesis class C involved_in IEA InterPro
UniProt
Ensembl		 GO_REF:0000002 GO_REF:0000041 GO_REF:0000043 GO_REF:0000107 NCBI chrNW_004936481:14,962,572...14,964,929
Ensembl chrNW_004936481:14,962,613...14,964,861 		JBrowse link
G Pigf phosphatidylinositol glycan anchor biosynthesis class F involved_in IEA InterPro
UniProt		 GO_REF:0000002 GO_REF:0000041 GO_REF:0000043 NCBI chrNW_004936508:5,659,059...5,695,441
Ensembl chrNW_004936508:5,658,879...5,696,695 		JBrowse link
G Pigg phosphatidylinositol glycan anchor biosynthesis class G (EMM blood group) involved_in
acts_upstream_of_or_within 		IEA UniProt
Ensembl
TreeGrafter
InterPro		 GO_REF:0000002 GO_REF:0000041 GO_REF:0000043 GO_REF:0000107 GO_REF:0000118 NCBI chrNW_004936477:22,524,227...22,563,536
Ensembl chrNW_004936477:22,523,729...22,563,708 		JBrowse link
G Pigh phosphatidylinositol glycan anchor biosynthesis class H involved_in IEA Ensembl
TreeGrafter
UniProt
InterPro		 GO_REF:0000002 GO_REF:0000041 GO_REF:0000107 GO_REF:0000118 NCBI chrNW_004936495:10,971,448...10,979,622
Ensembl chrNW_004936495:10,969,364...10,979,620 		JBrowse link
G Pigk phosphatidylinositol glycan anchor biosynthesis class K involved_in IEA UniProt GO_REF:0000041 GO_REF:0000043 NCBI chrNW_004936571:4,002,243...4,132,837
Ensembl chrNW_004936571:3,998,773...4,132,876 		JBrowse link
G Pigl phosphatidylinositol glycan anchor biosynthesis class L involved_in ISO
IEA 		RGD
UniProt
Ensembl		 PMID:9188481 GO_REF:0000041 GO_REF:0000043 GO_REF:0000107 GO_REF:0000117 RGD:729509 NCBI chrNW_004936821:290,240...381,126
Ensembl chrNW_004936821:288,026...381,172 		JBrowse link
G Pigm phosphatidylinositol glycan anchor biosynthesis class M involved_in ISO
IEA 		RGD
Ensembl
TreeGrafter
UniProt
InterPro		 PMID:11226175 GO_REF:0000002 GO_REF:0000041 GO_REF:0000043 GO_REF:0000107 GO_REF:0000118 RGD:70624 NCBI chrNW_004936740:595,932...597,964
Ensembl chrNW_004936740:596,072...597,343 		JBrowse link
G Pign phosphatidylinositol glycan anchor biosynthesis class N involved_in IEA InterPro
UniProt
TreeGrafter		 GO_REF:0000002 GO_REF:0000041 GO_REF:0000043 GO_REF:0000117 GO_REF:0000118 NCBI chrNW_004936497:3,121,184...3,230,912
Ensembl chrNW_004936497:3,124,557...3,234,061 		JBrowse link
G Pigo phosphatidylinositol glycan anchor biosynthesis class O involved_in IEA UniProt
Ensembl
TreeGrafter
InterPro		 GO_REF:0000002 GO_REF:0000041 GO_REF:0000043 GO_REF:0000107 GO_REF:0000117 GO_REF:0000118 NCBI chrNW_004936524:3,116,627...3,126,681
Ensembl chrNW_004936524:3,118,010...3,125,587 		JBrowse link
G Pigp phosphatidylinositol glycan anchor biosynthesis class P involved_in
acts_upstream_of_or_within 		IEA
ISO 		(PMID:10944123) UniProt
TreeGrafter
MGI
Ensembl
InterPro		 PMID:10944123 GO_REF:0000002 GO_REF:0000041 GO_REF:0000043 GO_REF:0000107 GO_REF:0000118 NCBI chrNW_004936500:5,724,178...5,732,081
Ensembl chrNW_004936500:5,724,202...5,731,885 		JBrowse link
G Pigq phosphatidylinositol glycan anchor biosynthesis class Q involved_in
acts_upstream_of_or_within 		IEA InterPro
Ensembl
TreeGrafter		 GO_REF:0000002 GO_REF:0000107 GO_REF:0000118 NCBI chrNW_004936501:415,232...429,902
Ensembl chrNW_004936501:414,905...429,600 		JBrowse link
G Pigs phosphatidylinositol glycan anchor biosynthesis class S involved_in IEA UniProt GO_REF:0000041 GO_REF:0000043 NCBI chrNW_004936538:4,779,325...4,796,960
Ensembl chrNW_004936538:4,779,313...4,796,767 		JBrowse link
G Pigu phosphatidylinositol glycan anchor biosynthesis class U involved_in IEA UniProt
Ensembl		 GO_REF:0000041 GO_REF:0000043 GO_REF:0000107 NCBI chrNW_004936561:6,013,145...6,104,548
Ensembl chrNW_004936561:6,013,145...6,107,667 		JBrowse link
G Pigv phosphatidylinositol glycan anchor biosynthesis class V involved_in IEA InterPro
TreeGrafter
Ensembl
UniProt		 GO_REF:0000002 GO_REF:0000041 GO_REF:0000043 GO_REF:0000107 GO_REF:0000118 NCBI chrNW_004936474:11,204,595...11,215,677
Ensembl chrNW_004936474:11,205,368...11,216,528 		JBrowse link
G Pigw phosphatidylinositol glycan anchor biosynthesis class W involved_in IEA UniProt
TreeGrafter
InterPro		 GO_REF:0000002 GO_REF:0000041 GO_REF:0000043 GO_REF:0000118 NCBI chrNW_004936490:1,675,592...1,678,494
Ensembl chrNW_004936490:1,675,765...1,677,279 		JBrowse link
G Pigx phosphatidylinositol glycan anchor biosynthesis class X involved_in IEA UniProt
InterPro		 GO_REF:0000002 GO_REF:0000041 GO_REF:0000043 NCBI chrNW_004936784:1,288,937...1,313,469
Ensembl chrNW_004936784:1,289,671...1,312,744 		JBrowse link
G Pigy phosphatidylinositol glycan anchor biosynthesis class Y acts_upstream_of_or_within ISO (PMID:16162815) MGI PMID:16162815 NCBI chrNW_004936685:984,606...985,106 JBrowse link
G Pigz phosphatidylinositol glycan anchor biosynthesis class Z (Gwada blood group) involved_in IEA UniProt
TreeGrafter		 GO_REF:0000043 GO_REF:0000118 NCBI chrNW_004936833:902,002...918,321 JBrowse link
G Slc30a5 solute carrier family 30 member 5 acts_upstream_of_positive_effect IEA Ensembl GO_REF:0000107 NCBI chrNW_004936480:418,621...454,303
Ensembl chrNW_004936480:417,205...454,277 		JBrowse link
GPI anchor metabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Pgap1 post-GPI attachment to proteins inositol deacylase 1 involved_in IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004936506:2,224,598...2,297,022
Ensembl chrNW_004936506:2,224,572...2,294,739 		JBrowse link
G Pgap3 post-GPI attachment to proteins phospholipase 3 involved_in IEA Ensembl
UniProt		 GO_REF:0000104 GO_REF:0000107 NCBI chrNW_004936490:14,862,204...14,877,217
Ensembl chrNW_004936490:14,859,538...14,877,269 		JBrowse link
G Pigm phosphatidylinositol glycan anchor biosynthesis class M involved_in IEA UniProt GO_REF:0000104 NCBI chrNW_004936740:595,932...597,964
Ensembl chrNW_004936740:596,072...597,343 		JBrowse link
G Pigw phosphatidylinositol glycan anchor biosynthesis class W involved_in IEA UniProt GO_REF:0000117 NCBI chrNW_004936490:1,675,592...1,678,494
Ensembl chrNW_004936490:1,675,765...1,677,279 		JBrowse link
G Pigx phosphatidylinositol glycan anchor biosynthesis class X involved_in IEA UniProt GO_REF:0000104 NCBI chrNW_004936784:1,288,937...1,313,469
Ensembl chrNW_004936784:1,289,671...1,312,744 		JBrowse link
lactosylceramide biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G B4galt4 beta-1,4-galactosyltransferase 4 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936536:6,215,221...6,241,828
Ensembl chrNW_004936536:6,215,152...6,241,877 		JBrowse link
G B4galt6 beta-1,4-galactosyltransferase 6 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936682:1,535,617...1,590,723
Ensembl chrNW_004936682:1,535,586...1,593,827 		JBrowse link
membrane lipid catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Blvrb biliverdin reductase B acts_upstream_of_or_within ISO (PMID:33359909) MGI PMID:33359909 NCBI chrNW_004936661:2,808,998...2,818,123
Ensembl chrNW_004936661:2,808,950...2,818,178 		JBrowse link
G Fabp1 fatty acid binding protein 1 acts_upstream_of_or_within ISO (PMID:23359610) MGI PMID:23359610 NCBI chrNW_004936712:738,361...743,073
Ensembl chrNW_004936712:738,348...743,955 		JBrowse link
G LOC101970101 cytochrome P450 1B1 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936663:345,021...355,188
Ensembl chrNW_004936663:348,368...355,191 		JBrowse link
G Mgst2 microsomal glutathione S-transferase 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936535:7,995,185...8,015,463
Ensembl chrNW_004936535:7,995,248...8,015,463 		JBrowse link
G Smpdl3b sphingomyelin phosphodiesterase acid like 3B involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936474:12,158,628...12,179,993
Ensembl chrNW_004936474:12,158,628...12,179,993 		JBrowse link
G Zpbp2 zona pellucida binding protein 2 acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chrNW_004936490:15,029,447...15,038,046
Ensembl chrNW_004936490:15,029,562...15,037,756 		JBrowse link
negative regulation of ceramide biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ormdl1 ORMDL sphingolipid biosynthesis regulator 1 acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chrNW_004936506:8,197,116...8,208,712
Ensembl chrNW_004936506:8,196,784...8,210,584 		JBrowse link
G Ormdl2 ORMDL sphingolipid biosynthesis regulator 2 acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chrNW_004936646:280,745...283,488
Ensembl chrNW_004936646:280,661...287,144 		JBrowse link
G Ormdl3 ORMDL sphingolipid biosynthesis regulator 3 acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chrNW_004936490:15,069,435...15,076,112
Ensembl chrNW_004936490:15,069,387...15,076,253 		JBrowse link
G Sphk1 sphingosine kinase 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936594:1,482,830...1,489,337
Ensembl chrNW_004936594:1,486,111...1,489,188 		JBrowse link
negative regulation of sphingolipid biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Abca2 ATP binding cassette subfamily A member 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936669:922,978...941,996
Ensembl chrNW_004936669:926,622...942,167 		JBrowse link
G Atg7 autophagy related 7 acts_upstream_of_or_within ISO (PMID:25332431) MGI PMID:25332431 NCBI chrNW_004936602:1,938,720...2,179,239
Ensembl chrNW_004936602:1,935,507...2,179,256 		JBrowse link
omega-hydroxyceramide biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Pnpla1 patatin like domain 1, omega-hydroxyceramide transacylase involved_in IEA Ensembl
UniProt		 GO_REF:0000107 GO_REF:0000117 NCBI chrNW_004936476:23,066,840...23,100,126
Ensembl chrNW_004936476:23,061,854...23,099,720 		JBrowse link
phytosphingosine biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Acer3 alkaline ceramidase 3 involved_in IEA Ensembl
TreeGrafter		 GO_REF:0000107 GO_REF:0000118 NCBI chrNW_004936498:5,496,991...5,653,206
Ensembl chrNW_004936498:5,496,991...5,653,206 		JBrowse link
positive regulation of ceramide biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ccn1 cellular communication network factor 1 acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chrNW_004936608:152,174...155,123
Ensembl chrNW_004936608:151,838...155,358 		JBrowse link
G Enpp7 ectonucleotide pyrophosphatase/phosphodiesterase 7 involved_in ISO (PMID:21177474) UniProt PMID:21177474 NCBI chrNW_004936594:3,855,071...3,864,034
Ensembl chrNW_004936594:3,855,150...3,858,317 		JBrowse link
G Pla2g6 phospholipase A2 group VI involved_in ISO
IEA 		RGD
TreeGrafter		 PMID:18936091 GO_REF:0000118 RGD:6482750 NCBI chrNW_004936492:3,011,752...3,060,962
Ensembl chrNW_004936492:3,011,772...3,060,986 		JBrowse link
G Prkcd protein kinase C delta involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936473:3,892,625...3,923,467
Ensembl chrNW_004936473:3,892,366...3,923,515 		JBrowse link
G Sirt3 sirtuin 3 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936888:63,131...78,536
Ensembl chrNW_004936888:63,546...77,950 		JBrowse link
G Smpd3 sphingomyelin phosphodiesterase 3 ISO RGD PMID:20096352 RGD:10041064 NCBI chrNW_004936475:18,667,563...18,755,132
Ensembl chrNW_004936475:18,671,428...18,755,208 		JBrowse link
G Sphk2 sphingosine kinase 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936664:2,668,708...2,676,608
Ensembl chrNW_004936664:2,669,920...2,676,587 		JBrowse link
G Znf750 zinc finger protein 750 acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chrNW_004936923:299,725...302,741
Ensembl chrNW_004936923:299,719...307,488 		JBrowse link
positive regulation of glucosylceramide catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Prkcd protein kinase C delta involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936473:3,892,625...3,923,467
Ensembl chrNW_004936473:3,892,366...3,923,515 		JBrowse link
positive regulation of sphingomyelin catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Enpp7 ectonucleotide pyrophosphatase/phosphodiesterase 7 involved_in ISO (PMID:21177474) UniProt PMID:21177474 NCBI chrNW_004936594:3,855,071...3,864,034
Ensembl chrNW_004936594:3,855,150...3,858,317 		JBrowse link
G Prkcd protein kinase C delta involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936473:3,892,625...3,923,467
Ensembl chrNW_004936473:3,892,366...3,923,515 		JBrowse link
regulation of ceramide biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ormdl1 ORMDL sphingolipid biosynthesis regulator 1 involved_in
acts_upstream_of 		IEA UniProt
Ensembl		 GO_REF:0000104 GO_REF:0000107 GO_REF:0000117 NCBI chrNW_004936506:8,197,116...8,208,712
Ensembl chrNW_004936506:8,196,784...8,210,584 		JBrowse link
G Ormdl2 ORMDL sphingolipid biosynthesis regulator 2 involved_in IEA UniProt GO_REF:0000104 GO_REF:0000117 NCBI chrNW_004936646:280,745...283,488
Ensembl chrNW_004936646:280,661...287,144 		JBrowse link
G Ormdl3 ORMDL sphingolipid biosynthesis regulator 3 involved_in
acts_upstream_of 		IEA UniProt
Ensembl		 GO_REF:0000104 GO_REF:0000107 GO_REF:0000117 NCBI chrNW_004936490:15,069,435...15,076,112
Ensembl chrNW_004936490:15,069,387...15,076,253 		JBrowse link
G Paqr4 progestin and adipoQ receptor family member 4 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936694:1,196,650...1,200,067
Ensembl chrNW_004936694:1,196,527...1,200,091 		JBrowse link
G Prkcd protein kinase C delta involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936473:3,892,625...3,923,467
Ensembl chrNW_004936473:3,892,366...3,923,515 		JBrowse link
G Samd8 sterile alpha motif domain containing 8 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936521:4,170,016...4,229,877
Ensembl chrNW_004936521:4,169,979...4,229,890 		JBrowse link
regulation of membrane lipid metabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Nsmaf neutral sphingomyelinase activation associated factor involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936496:14,275,582...14,331,330
Ensembl chrNW_004936496:14,275,500...14,331,627 		JBrowse link
G Tnf tumor necrosis factor involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936727:1,936,066...1,937,766
Ensembl chrNW_004936727:1,936,066...1,937,766 		JBrowse link
G Tnfrsf1a TNF receptor superfamily member 1A involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936709:1,407,327...1,421,448
Ensembl chrNW_004936709:1,407,278...1,421,921 		JBrowse link
regulation of sphingolipid biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ormdl1 ORMDL sphingolipid biosynthesis regulator 1 acts_upstream_of IEA Ensembl GO_REF:0000107 NCBI chrNW_004936506:8,197,116...8,208,712
Ensembl chrNW_004936506:8,196,784...8,210,584 		JBrowse link
G Ormdl3 ORMDL sphingolipid biosynthesis regulator 3 acts_upstream_of IEA Ensembl GO_REF:0000107 NCBI chrNW_004936490:15,069,435...15,076,112
Ensembl chrNW_004936490:15,069,387...15,076,253 		JBrowse link
sphinganine biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G LOC101967158 serine palmitoyltransferase 2 acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chrNW_004936488:6,313,189...6,404,425
Ensembl chrNW_004936488:6,289,833...6,296,849
Ensembl chrNW_004936488:6,289,833...6,296,849 		JBrowse link
G Sptlc1 serine palmitoyltransferase long chain base subunit 1 acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chrNW_004936796:886,946...948,254
Ensembl chrNW_004936796:886,922...948,254 		JBrowse link
sphinganine metabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Degs2 delta 4-desaturase, sphingolipid 2 involved_in
acts_upstream_of_or_within 		IEA TreeGrafter
Ensembl		 GO_REF:0000107 GO_REF:0000118 NCBI chrNW_004936604:3,821,672...3,839,975
Ensembl chrNW_004936604:3,817,886...3,839,986 		JBrowse link
sphinganine-1-phosphate biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Sphk2 sphingosine kinase 2 involved_in IEA Ensembl
TreeGrafter		 GO_REF:0000107 GO_REF:0000118 NCBI chrNW_004936664:2,668,708...2,676,608
Ensembl chrNW_004936664:2,669,920...2,676,587 		JBrowse link
sphinganine-1-phosphate metabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Sgpp1 sphingosine-1-phosphate phosphatase 1 acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chrNW_004936495:7,500,991...7,528,520
Ensembl chrNW_004936495:7,502,859...7,528,515 		JBrowse link
sphingoid biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Sptlc3 serine palmitoyltransferase long chain base subunit 3 acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chrNW_004936485:6,647,930...6,784,792
Ensembl chrNW_004936485:6,644,188...6,784,828 		JBrowse link
sphingolipid biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Acer1 alkaline ceramidase 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936588:3,688,244...3,705,831
Ensembl chrNW_004936588:3,688,244...3,705,831 		JBrowse link
G B3gnt5 UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltransferase 5 involved_in IEA UniProt GO_REF:0000117 NCBI chrNW_004936566:271,807...289,526
Ensembl chrNW_004936566:273,714...274,847 		JBrowse link
G Cerkl CERK like autophagy regulator acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chrNW_004936509:10,294,247...10,404,743
Ensembl chrNW_004936509:10,294,988...10,404,609 		JBrowse link
G Cers1 ceramide synthase 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936596:2,442,978...2,467,184
Ensembl chrNW_004936596:2,442,991...2,467,184 		JBrowse link
G Cers2 ceramide synthase 2 acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chrNW_004936580:1,192,843...1,201,863
Ensembl chrNW_004936580:1,192,847...1,201,909 		JBrowse link
G Cers4 ceramide synthase 4 acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chrNW_004936588:5,121,645...5,128,774
Ensembl chrNW_004936588:5,107,663...5,131,140 		JBrowse link
G Cers5 ceramide synthase 5 acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chrNW_004936512:7,780,212...7,809,182
Ensembl chrNW_004936512:7,780,153...7,809,188 		JBrowse link
G Cers6 ceramide synthase 6 acts_upstream_of_or_within ISO (PMID:15823095) MGI PMID:15823095 NCBI chrNW_004936469:10,735,327...11,027,019
Ensembl chrNW_004936469:10,740,601...11,027,067 		JBrowse link
G Degs1 delta 4-desaturase, sphingolipid 1 involved_in IEA InterPro GO_REF:0000002 NCBI chrNW_004936526:1,149,984...1,153,632
Ensembl chrNW_004936526:1,135,662...1,155,512 		JBrowse link
G Degs2 delta 4-desaturase, sphingolipid 2 involved_in
acts_upstream_of_or_within 		IEA InterPro
Ensembl		 GO_REF:0000002 GO_REF:0000107 NCBI chrNW_004936604:3,821,672...3,839,975
Ensembl chrNW_004936604:3,817,886...3,839,986 		JBrowse link
G Elovl1 ELOVL fatty acid elongase 1 involved_in IEA Ensembl
TreeGrafter		 GO_REF:0000107 GO_REF:0000118 NCBI chrNW_004936474:24,765,173...24,769,903
Ensembl chrNW_004936474:24,764,718...24,769,947 		JBrowse link
G Elovl2 ELOVL fatty acid elongase 2 involved_in IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004936534:1,996,111...2,016,184
Ensembl chrNW_004936534:2,000,378...2,018,892 		JBrowse link
G Elovl3 ELOVL fatty acid elongase 3 involved_in IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004936600:3,619,549...3,623,495
Ensembl chrNW_004936600:3,618,572...3,623,540 		JBrowse link
G Elovl4 ELOVL fatty acid elongase 4 involved_in IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004936510:10,246,901...10,276,049
Ensembl chrNW_004936510:10,246,356...10,276,753 		JBrowse link
G Elovl5 ELOVL fatty acid elongase 5 involved_in IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004936476:7,536,635...7,618,271
Ensembl chrNW_004936476:7,544,876...7,618,271 		JBrowse link
G Elovl6 ELOVL fatty acid elongase 6 involved_in IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004936563:1,224,392...1,344,707
Ensembl chrNW_004936563:1,221,233...1,344,810 		JBrowse link
G Elovl7 ELOVL fatty acid elongase 7 involved_in IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004936480:7,642,188...7,711,245
Ensembl chrNW_004936480:7,642,187...7,711,250 		JBrowse link
G Hacd1 3-hydroxyacyl-CoA dehydratase 1 involved_in IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004936520:9,716,178...9,725,949
Ensembl chrNW_004936520:9,716,224...9,727,841 		JBrowse link
G Hacd2 3-hydroxyacyl-CoA dehydratase 2 involved_in IEA Ensembl
TreeGrafter		 GO_REF:0000107 GO_REF:0000118 NCBI chrNW_004936725:1,614,637...1,705,111
Ensembl chrNW_004936725:1,614,622...1,705,132 		JBrowse link
G Hacd3 3-hydroxyacyl-CoA dehydratase 3 involved_in IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004936471:25,796,666...25,829,278
Ensembl chrNW_004936471:25,796,620...25,829,948 		JBrowse link
G Hacd4 3-hydroxyacyl-CoA dehydratase 4 involved_in IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004936652:2,647,639...2,677,156
Ensembl chrNW_004936652:2,643,712...2,677,207 		JBrowse link
G Kdsr 3-ketodihydrosphingosine reductase involved_in
acts_upstream_of_or_within 		IEA InterPro
Ensembl
UniProt
TreeGrafter		 GO_REF:0000002 GO_REF:0000107 GO_REF:0000117 GO_REF:0000118 NCBI chrNW_004936497:2,169,982...2,199,600
Ensembl chrNW_004936497:2,169,712...2,203,150 		JBrowse link
G LOC101955374 elongation of very long chain fatty acids protein 5-like involved_in IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004938951:187...1,346
Ensembl chrNW_004938951:98...1,365 		JBrowse link
G LOC101958833 ceramide synthase 3 acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chrNW_004936483:3,276,519...3,365,054
Ensembl chrNW_004936483:3,206,110...3,229,939
Ensembl chrNW_004936483:3,206,110...3,229,939 		JBrowse link
G LOC101967158 serine palmitoyltransferase 2 acts_upstream_of_or_within
involved_in 		IEA Ensembl GO_REF:0000107 NCBI chrNW_004936488:6,313,189...6,404,425
Ensembl chrNW_004936488:6,289,833...6,296,849
Ensembl chrNW_004936488:6,289,833...6,296,849 		JBrowse link
G Sptlc1 serine palmitoyltransferase long chain base subunit 1 acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chrNW_004936796:886,946...948,254
Ensembl chrNW_004936796:886,922...948,254 		JBrowse link
G Sptssb serine palmitoyltransferase small subunit B acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chrNW_004936708:1,270,720...1,301,493
Ensembl chrNW_004936708:1,271,190...1,271,420 		JBrowse link
sphingolipid catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Enpp2 ectonucleotide pyrophosphatase/phosphodiesterase 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936470:26,994,549...27,099,758
Ensembl chrNW_004936470:26,994,215...27,100,999 		JBrowse link
G Sgpl1 sphingosine-1-phosphate lyase 1 involved_in IEA Ensembl
TreeGrafter		 GO_REF:0000107 GO_REF:0000118 NCBI chrNW_004936521:7,850,370...7,899,998
Ensembl chrNW_004936521:7,848,972...7,900,041 		JBrowse link
G Vps54 VPS54 subunit of GARP complex involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936491:8,835,397...8,922,403
Ensembl chrNW_004936491:8,833,285...8,922,711 		JBrowse link
sphingolipid metabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Acer1 alkaline ceramidase 1 involved_in
acts_upstream_of_or_within 		IEA UniProt
Ensembl		 GO_REF:0000041 GO_REF:0000043 GO_REF:0000107 NCBI chrNW_004936588:3,688,244...3,705,831
Ensembl chrNW_004936588:3,688,244...3,705,831 		JBrowse link
G Acer2 alkaline ceramidase 2 involved_in IEA UniProt GO_REF:0000041 GO_REF:0000043 NCBI chrNW_004936652:1,289,445...1,329,236
Ensembl chrNW_004936652:1,289,382...1,329,409 		JBrowse link
G Acer3 alkaline ceramidase 3 involved_in IEA UniProt GO_REF:0000041 GO_REF:0000043 NCBI chrNW_004936498:5,496,991...5,653,206
Ensembl chrNW_004936498:5,496,991...5,653,206 		JBrowse link
G Agk acylglycerol kinase involved_in IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004936592:5,454,860...5,531,285
Ensembl chrNW_004936592:5,457,582...5,531,000 		JBrowse link
G Alox12b arachidonate 12-lipoxygenase, 12R type involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936595:1,310,556...1,321,974
Ensembl chrNW_004936595:1,310,534...1,321,985 		JBrowse link
G Aloxe3 arachidonate epidermal lipoxygenase 3 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936595:1,329,492...1,350,914
Ensembl chrNW_004936595:1,329,435...1,350,923 		JBrowse link
G Arv1 ARV1 fatty acid homeostasis modulator involved_in IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004936484:19,551,293...19,562,132
Ensembl chrNW_004936484:19,551,293...19,562,138 		JBrowse link
G Asah1 N-acylsphingosine amidohydrolase 1 involved_in IEA UniProt GO_REF:0000043 NCBI chrNW_004936554:104,666...141,761
Ensembl chrNW_004936554:104,229...141,512 		JBrowse link
G Asah2 N-acylsphingosine amidohydrolase 2 involved_in IEA UniProt GO_REF:0000043 NCBI chrNW_004936735:2,004,373...2,092,501
Ensembl chrNW_004936735:2,031,844...2,092,347 		JBrowse link
G B4galt5 beta-1,4-galactosyltransferase 5 involved_in IEA UniProt GO_REF:0000043 NCBI chrNW_004936514:4,719,198...4,736,638
Ensembl chrNW_004936514:4,719,052...4,736,635 		JBrowse link
G B4galt6 beta-1,4-galactosyltransferase 6 involved_in IEA UniProt GO_REF:0000043 NCBI chrNW_004936682:1,535,617...1,590,723
Ensembl chrNW_004936682:1,535,586...1,593,827 		JBrowse link
G Cerk ceramide kinase involved_in IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004936629:3,304,236...3,346,264
Ensembl chrNW_004936629:3,304,236...3,344,136 		JBrowse link
G Cerkl CERK like autophagy regulator involved_in IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004936509:10,294,247...10,404,743
Ensembl chrNW_004936509:10,294,988...10,404,609 		JBrowse link
G Cers2 ceramide synthase 2 involved_in IEA UniProt GO_REF:0000041 NCBI chrNW_004936580:1,192,843...1,201,863
Ensembl chrNW_004936580:1,192,847...1,201,909 		JBrowse link
G Cers4 ceramide synthase 4 involved_in IEA UniProt GO_REF:0000041 NCBI chrNW_004936588:5,121,645...5,128,774
Ensembl chrNW_004936588:5,107,663...5,131,140 		JBrowse link
G Cers5 ceramide synthase 5 involved_in IEA UniProt GO_REF:0000041 NCBI chrNW_004936512:7,780,212...7,809,182
Ensembl chrNW_004936512:7,780,153...7,809,188 		JBrowse link
G Cers6 ceramide synthase 6 involved_in IEA UniProt GO_REF:0000041 NCBI chrNW_004936469:10,735,327...11,027,019
Ensembl chrNW_004936469:10,740,601...11,027,067 		JBrowse link
G Fa2h fatty acid 2-hydroxylase involved_in IEA UniProt GO_REF:0000043 NCBI chrNW_004936475:23,625,023...23,675,211
Ensembl chrNW_004936475:23,624,969...23,675,235 		JBrowse link
G Gal3st1 galactose-3-O-sulfotransferase 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936904:142,576...158,606
Ensembl chrNW_004936904:142,387...159,633 		JBrowse link
G Galc galactosylceramidase involved_in IEA UniProt GO_REF:0000043 NCBI chrNW_004936488:15,444,184...15,519,395
Ensembl chrNW_004936488:15,444,801...15,518,856 		JBrowse link
G Gba1 glucosylceramidase beta 1 involved_in IEA InterPro
UniProt		 GO_REF:0000002 GO_REF:0000043 NCBI chrNW_004936580:4,715,869...4,720,752
Ensembl chrNW_004936580:4,715,408...4,720,798 		JBrowse link
G Gba2 glucosylceramidase beta 2 involved_in IEA UniProt GO_REF:0000043 NCBI chrNW_004936524:3,730,833...3,742,526
Ensembl chrNW_004936524:3,730,833...3,742,531 		JBrowse link
G Kdsr 3-ketodihydrosphingosine reductase involved_in IEA UniProt GO_REF:0000043 NCBI chrNW_004936497:2,169,982...2,199,600
Ensembl chrNW_004936497:2,169,712...2,203,150 		JBrowse link
G LOC101955719 sphingomyelin phosphodiesterase 5 involved_in IEA UniProt GO_REF:0000043 NCBI chrNW_004936470:8,139,207...8,142,061
Ensembl chrNW_004936470:8,139,615...8,141,716 		JBrowse link
G LOC101958833 ceramide synthase 3 involved_in IEA UniProt GO_REF:0000041 NCBI chrNW_004936483:3,276,519...3,365,054
Ensembl chrNW_004936483:3,206,110...3,229,939
Ensembl chrNW_004936483:3,206,110...3,229,939 		JBrowse link
G LOC101967158 serine palmitoyltransferase 2 involved_in IEA UniProt GO_REF:0000043 NCBI chrNW_004936488:6,313,189...6,404,425
Ensembl chrNW_004936488:6,289,833...6,296,849
Ensembl chrNW_004936488:6,289,833...6,296,849 		JBrowse link
G Ormdl1 ORMDL sphingolipid biosynthesis regulator 1 involved_in IEA UniProt GO_REF:0000117 NCBI chrNW_004936506:8,197,116...8,208,712
Ensembl chrNW_004936506:8,196,784...8,210,584 		JBrowse link
G Ormdl2 ORMDL sphingolipid biosynthesis regulator 2 involved_in IEA UniProt GO_REF:0000117 NCBI chrNW_004936646:280,745...283,488
Ensembl chrNW_004936646:280,661...287,144 		JBrowse link
G Ormdl3 ORMDL sphingolipid biosynthesis regulator 3 involved_in IEA UniProt GO_REF:0000117 NCBI chrNW_004936490:15,069,435...15,076,112
Ensembl chrNW_004936490:15,069,387...15,076,253 		JBrowse link
G Psap prosaposin involved_in
acts_upstream_of_or_within 		IEA
ISO 		(PMID:11371512) InterPro
MGI
UniProt		 PMID:11371512 GO_REF:0000002 GO_REF:0000104 NCBI chrNW_004936521:6,975,844...7,009,460
Ensembl chrNW_004936521:6,975,770...7,009,136 		JBrowse link
G Samd8 sterile alpha motif domain containing 8 involved_in IEA UniProt GO_REF:0000043 NCBI chrNW_004936521:4,170,016...4,229,877
Ensembl chrNW_004936521:4,169,979...4,229,890 		JBrowse link
G Serinc1 serine incorporator 1 involved_in ISO PMID:16120614 HGNC-UCL PMID:16120614 RGD:8553290 NCBI chrNW_004936802:1,346,565...1,366,817
Ensembl chrNW_004936802:1,346,708...1,366,989 		JBrowse link
G Sftpb surfactant protein B involved_in IEA InterPro GO_REF:0000002 NCBI chrNW_004936712:1,614,979...1,621,207
Ensembl chrNW_004936712:1,614,979...1,622,466 		JBrowse link
G Sgms1 sphingomyelin synthase 1 involved_in IEA UniProt GO_REF:0000043 NCBI chrNW_004936735:1,702,754...1,984,141
Ensembl chrNW_004936735:1,943,352...1,984,141 		JBrowse link
G Sgms2 sphingomyelin synthase 2 involved_in IEA UniProt GO_REF:0000043 NCBI chrNW_004936818:687,695...726,123
Ensembl chrNW_004936818:683,659...726,174 		JBrowse link
G Sgpl1 sphingosine-1-phosphate lyase 1 involved_in IEA UniProt GO_REF:0000043 NCBI chrNW_004936521:7,850,370...7,899,998
Ensembl chrNW_004936521:7,848,972...7,900,041 		JBrowse link
G Sgpp1 sphingosine-1-phosphate phosphatase 1 acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chrNW_004936495:7,500,991...7,528,520
Ensembl chrNW_004936495:7,502,859...7,528,515 		JBrowse link
G Smpd2 sphingomyelin phosphodiesterase 2 involved_in IEA UniProt GO_REF:0000043 NCBI chrNW_004936564:5,565,205...5,568,474
Ensembl chrNW_004936564:5,564,784...5,568,956 		JBrowse link
G Smpd3 sphingomyelin phosphodiesterase 3 involved_in
acts_upstream_of_or_within 		IEA UniProt
Ensembl		 GO_REF:0000041 GO_REF:0000043 GO_REF:0000107 NCBI chrNW_004936475:18,667,563...18,755,132
Ensembl chrNW_004936475:18,671,428...18,755,208 		JBrowse link
G Sphk1 sphingosine kinase 1 involved_in IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004936594:1,482,830...1,489,337
Ensembl chrNW_004936594:1,486,111...1,489,188 		JBrowse link
G Sphk2 sphingosine kinase 2 involved_in IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004936664:2,668,708...2,676,608
Ensembl chrNW_004936664:2,669,920...2,676,587 		JBrowse link
G Spns2 SPNS lysolipid transporter 2, sphingosine-1-phosphate acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chrNW_004936677:1,058,601...1,093,233
Ensembl chrNW_004936677:1,058,595...1,093,147 		JBrowse link
G Sptlc1 serine palmitoyltransferase long chain base subunit 1 involved_in IEA Ensembl
UniProt		 GO_REF:0000043 GO_REF:0000107 NCBI chrNW_004936796:886,946...948,254
Ensembl chrNW_004936796:886,922...948,254 		JBrowse link
G Sptlc3 serine palmitoyltransferase long chain base subunit 3 involved_in IEA UniProt GO_REF:0000043 NCBI chrNW_004936485:6,647,930...6,784,792
Ensembl chrNW_004936485:6,644,188...6,784,828 		JBrowse link
G Sptssa serine palmitoyltransferase small subunit A involved_in IEA UniProt GO_REF:0000041 GO_REF:0000043 NCBI chrNW_004936494:8,717,821...8,738,923
Ensembl chrNW_004936494:8,716,829...8,739,066 		JBrowse link
G Sptssb serine palmitoyltransferase small subunit B involved_in IEA UniProt GO_REF:0000041 GO_REF:0000043 NCBI chrNW_004936708:1,270,720...1,301,493
Ensembl chrNW_004936708:1,271,190...1,271,420 		JBrowse link
G St8sia1 ST8 alpha-N-acetyl-neuraminide alpha-2,8-sialyltransferase 1 involved_in IEA UniProt GO_REF:0000043 NCBI chrNW_004936548:4,671,257...4,797,917
Ensembl chrNW_004936548:4,671,284...4,796,426 		JBrowse link
G Tecr trans-2,3-enoyl-CoA reductase involved_in IEA Ensembl
UniProt		 GO_REF:0000043 GO_REF:0000107 NCBI chrNW_004936659:3,051,657...3,080,948
Ensembl chrNW_004936659:3,051,566...3,084,788 		JBrowse link
G Th tyrosine hydroxylase ISO sphingosine 1-phosphate RGD PMID:21076868 RGD:5128811 NCBI chrNW_004936794:478,651...486,887
Ensembl chrNW_004936794:478,614...487,061 		JBrowse link
G Ugcg UDP-glucose ceramide glucosyltransferase involved_in IEA UniProt GO_REF:0000041 GO_REF:0000043 NCBI chrNW_004936559:1,475,684...1,513,273
Ensembl chrNW_004936559:1,475,592...1,513,273 		JBrowse link
G Ugt8 UDP glycosyltransferase 8 involved_in IEA UniProt GO_REF:0000043 NCBI chrNW_004936563:5,251,451...5,305,683
Ensembl chrNW_004936563:5,224,173...5,306,120 		JBrowse link
G Zpbp2 zona pellucida binding protein 2 acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chrNW_004936490:15,029,447...15,038,046
Ensembl chrNW_004936490:15,029,562...15,037,756 		JBrowse link
sphingomyelin biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Cert1 ceramide transporter 1 involved_in ISO (PMID:39106189) UOS_MCB PMID:39106189 NCBI chrNW_004936549:1,261,913...1,368,743
Ensembl chrNW_004936549:1,261,931...1,371,380 		JBrowse link
G LOC101967158 serine palmitoyltransferase 2 acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chrNW_004936488:6,313,189...6,404,425
Ensembl chrNW_004936488:6,289,833...6,296,849
Ensembl chrNW_004936488:6,289,833...6,296,849 		JBrowse link
G Ormdl1 ORMDL sphingolipid biosynthesis regulator 1 acts_upstream_of IEA Ensembl GO_REF:0000107 NCBI chrNW_004936506:8,197,116...8,208,712
Ensembl chrNW_004936506:8,196,784...8,210,584 		JBrowse link
G Ormdl3 ORMDL sphingolipid biosynthesis regulator 3 acts_upstream_of IEA Ensembl GO_REF:0000107 NCBI chrNW_004936490:15,069,435...15,076,112
Ensembl chrNW_004936490:15,069,387...15,076,253 		JBrowse link
G Osbp oxysterol binding protein involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936581:3,118,198...3,148,882
Ensembl chrNW_004936581:3,118,192...3,149,005 		JBrowse link
G Pemt phosphatidylethanolamine N-methyltransferase acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chrNW_004936741:1,131,792...1,207,460
Ensembl chrNW_004936741:1,128,616...1,207,499 		JBrowse link
G Sgms1 sphingomyelin synthase 1 involved_in IEA Ensembl
TreeGrafter		 GO_REF:0000107 GO_REF:0000118 NCBI chrNW_004936735:1,702,754...1,984,141
Ensembl chrNW_004936735:1,943,352...1,984,141 		JBrowse link
G Sgms2 sphingomyelin synthase 2 involved_in
acts_upstream_of_or_within 		IEA TreeGrafter
Ensembl		 GO_REF:0000107 GO_REF:0000118 NCBI chrNW_004936818:687,695...726,123
Ensembl chrNW_004936818:683,659...726,174 		JBrowse link
G Sptlc1 serine palmitoyltransferase long chain base subunit 1 involved_in
acts_upstream_of_or_within 		IEA
ISO 		(PMID:16216550) Ensembl
UniProt
MGI		 PMID:16216550 GO_REF:0000107 GO_REF:0000117 NCBI chrNW_004936796:886,946...948,254
Ensembl chrNW_004936796:886,922...948,254 		JBrowse link
G Vapa VAMP associated protein A involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936626:1,550,305...1,585,783
Ensembl chrNW_004936626:1,548,139...1,568,656 		JBrowse link
sphingomyelin catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G LOC101955719 sphingomyelin phosphodiesterase 5 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936470:8,139,207...8,142,061
Ensembl chrNW_004936470:8,139,615...8,141,716 		JBrowse link
G Smpd1 sphingomyelin phosphodiesterase 1 involved_in
acts_upstream_of_or_within 		IEA UniProt
Ensembl
TreeGrafter
InterPro		 GO_REF:0000002 GO_REF:0000104 GO_REF:0000107 GO_REF:0000117 GO_REF:0000118 NCBI chrNW_004936842:448,315...452,557
Ensembl chrNW_004936842:447,991...452,630 		JBrowse link
G Smpd2 sphingomyelin phosphodiesterase 2 involved_in
acts_upstream_of_or_within 		IEA
ISO 		(PMID:23973266) Ensembl
MGI		 PMID:23973266 GO_REF:0000107 NCBI chrNW_004936564:5,565,205...5,568,474
Ensembl chrNW_004936564:5,564,784...5,568,956 		JBrowse link
G Smpd3 sphingomyelin phosphodiesterase 3 acts_upstream_of_or_within
involved_in 		IEA Ensembl GO_REF:0000107 NCBI chrNW_004936475:18,667,563...18,755,132
Ensembl chrNW_004936475:18,671,428...18,755,208 		JBrowse link
G Smpd4 sphingomyelin phosphodiesterase 4 involved_in IEA Ensembl
TreeGrafter		 GO_REF:0000107 GO_REF:0000118 NCBI chrNW_004936619:2,647,880...2,676,371
Ensembl chrNW_004936619:2,647,967...2,676,488 		JBrowse link
G Smpdl3a sphingomyelin phosphodiesterase acid like 3A NOT|involved_in ISO
IEA 		(PMID:26783088) UniProt
InterPro		 PMID:26783088 GO_REF:0000002 NCBI chrNW_004936802:1,070,919...1,089,222
Ensembl chrNW_004936802:1,070,683...1,088,614 		JBrowse link
G Smpdl3b sphingomyelin phosphodiesterase acid like 3B involved_in IEA InterPro GO_REF:0000002 NCBI chrNW_004936474:12,158,628...12,179,993
Ensembl chrNW_004936474:12,158,628...12,179,993 		JBrowse link
sphingomyelin metabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Abca2 ATP binding cassette subfamily A member 2 involved_in ISO (PMID:17488728) UniProt PMID:17488728 NCBI chrNW_004936669:922,978...941,996
Ensembl chrNW_004936669:926,622...942,167 		JBrowse link
G Enpp7 ectonucleotide pyrophosphatase/phosphodiesterase 7 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936594:3,855,071...3,864,034
Ensembl chrNW_004936594:3,855,150...3,858,317 		JBrowse link
G LOC101955719 sphingomyelin phosphodiesterase 5 involved_in IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004936470:8,139,207...8,142,061
Ensembl chrNW_004936470:8,139,615...8,141,716 		JBrowse link
G Smpd3 sphingomyelin phosphodiesterase 3 involved_in
acts_upstream_of_or_within 		IEA TreeGrafter
Ensembl		 GO_REF:0000107 GO_REF:0000118 NCBI chrNW_004936475:18,667,563...18,755,132
Ensembl chrNW_004936475:18,671,428...18,755,208 		JBrowse link
sphingosine biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Abca2 ATP binding cassette subfamily A member 2 acts_upstream_of_positive_effect IEA Ensembl GO_REF:0000107 NCBI chrNW_004936669:922,978...941,996
Ensembl chrNW_004936669:926,622...942,167 		JBrowse link
G Acer1 alkaline ceramidase 1 involved_in IEA Ensembl
TreeGrafter
UniProt		 GO_REF:0000107 GO_REF:0000117 GO_REF:0000118 NCBI chrNW_004936588:3,688,244...3,705,831
Ensembl chrNW_004936588:3,688,244...3,705,831 		JBrowse link
G Acer2 alkaline ceramidase 2 involved_in IEA Ensembl
TreeGrafter
UniProt		 GO_REF:0000107 GO_REF:0000117 GO_REF:0000118 NCBI chrNW_004936652:1,289,445...1,329,236
Ensembl chrNW_004936652:1,289,382...1,329,409 		JBrowse link
G Acer3 alkaline ceramidase 3 involved_in IEA Ensembl
UniProt		 GO_REF:0000107 GO_REF:0000117 NCBI chrNW_004936498:5,496,991...5,653,206
Ensembl chrNW_004936498:5,496,991...5,653,206 		JBrowse link
G Agk acylglycerol kinase involved_in IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004936592:5,454,860...5,531,285
Ensembl chrNW_004936592:5,457,582...5,531,000 		JBrowse link
G Asah1 N-acylsphingosine amidohydrolase 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936554:104,666...141,761
Ensembl chrNW_004936554:104,229...141,512 		JBrowse link
G Asah2 N-acylsphingosine amidohydrolase 2 involved_in IEA Ensembl
UniProt
TreeGrafter		 GO_REF:0000107 GO_REF:0000117 GO_REF:0000118 NCBI chrNW_004936735:2,004,373...2,092,501
Ensembl chrNW_004936735:2,031,844...2,092,347 		JBrowse link
G Gba1 glucosylceramidase beta 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936580:4,715,869...4,720,752
Ensembl chrNW_004936580:4,715,408...4,720,798 		JBrowse link
G LOC101967158 serine palmitoyltransferase 2 involved_in
acts_upstream_of_or_within 		IEA TreeGrafter
Ensembl		 GO_REF:0000107 GO_REF:0000118 NCBI chrNW_004936488:6,313,189...6,404,425
Ensembl chrNW_004936488:6,289,833...6,296,849
Ensembl chrNW_004936488:6,289,833...6,296,849 		JBrowse link
G Sphk1 sphingosine kinase 1 involved_in IEA Ensembl
TreeGrafter		 GO_REF:0000107 GO_REF:0000118 NCBI chrNW_004936594:1,482,830...1,489,337
Ensembl chrNW_004936594:1,486,111...1,489,188 		JBrowse link
G Sphk2 sphingosine kinase 2 involved_in IEA Ensembl
TreeGrafter		 GO_REF:0000107 GO_REF:0000118 NCBI chrNW_004936664:2,668,708...2,676,608
Ensembl chrNW_004936664:2,669,920...2,676,587 		JBrowse link
G Sptlc1 serine palmitoyltransferase long chain base subunit 1 involved_in
acts_upstream_of_or_within 		IEA TreeGrafter
Ensembl		 GO_REF:0000107 GO_REF:0000118 NCBI chrNW_004936796:886,946...948,254
Ensembl chrNW_004936796:886,922...948,254 		JBrowse link
G Sptlc3 serine palmitoyltransferase long chain base subunit 3 involved_in IEA Ensembl
TreeGrafter		 GO_REF:0000107 GO_REF:0000118 NCBI chrNW_004936485:6,647,930...6,784,792
Ensembl chrNW_004936485:6,644,188...6,784,828 		JBrowse link
G Sptssa serine palmitoyltransferase small subunit A involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936494:8,717,821...8,738,923
Ensembl chrNW_004936494:8,716,829...8,739,066 		JBrowse link
G Sptssb serine palmitoyltransferase small subunit B involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936708:1,270,720...1,301,493
Ensembl chrNW_004936708:1,271,190...1,271,420 		JBrowse link
sphingosine metabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Asah2 N-acylsphingosine amidohydrolase 2 involved_in ISO (PMID:16229686), (PMID:17475390), (PMID:26190575)
(PMID:10781606), (PMID:15946935) 		UniProt PMID:10781606 PMID:15946935 PMID:16229686 PMID:17475390 PMID:26190575 NCBI chrNW_004936735:2,004,373...2,092,501
Ensembl chrNW_004936735:2,031,844...2,092,347 		JBrowse link
G Naaa N-acylethanolamine acid amidase involved_in ISO (PMID:15655246) UniProt PMID:15655246 NCBI chrNW_004936598:42,751...56,261 JBrowse link
G Plpp1 phospholipid phosphatase 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936480:12,265,304...12,357,747
Ensembl chrNW_004936480:12,265,246...12,359,450 		JBrowse link
G Plpp2 phospholipid phosphatase 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936588:14,422...20,467
Ensembl chrNW_004936588:14,399...20,514 		JBrowse link
G Plpp3 phospholipid phosphatase 3 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936522:4,992,333...5,074,295
Ensembl chrNW_004936522:4,992,322...5,074,313 		JBrowse link
G Sgpp1 sphingosine-1-phosphate phosphatase 1 involved_in
acts_upstream_of_or_within 		IEA TreeGrafter
Ensembl		 GO_REF:0000107 GO_REF:0000118 NCBI chrNW_004936495:7,500,991...7,528,520
Ensembl chrNW_004936495:7,502,859...7,528,515 		JBrowse link
G Sgpp2 sphingosine-1-phosphate phosphatase 2 involved_in IEA Ensembl
TreeGrafter		 GO_REF:0000107 GO_REF:0000118 NCBI chrNW_004936569:4,405,804...4,518,637
Ensembl chrNW_004936569:4,406,253...4,518,655 		JBrowse link
G Sphk1 sphingosine kinase 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936594:1,482,830...1,489,337
Ensembl chrNW_004936594:1,486,111...1,489,188 		JBrowse link
G Sphk2 sphingosine kinase 2 acts_upstream_of_or_within
involved_in 		IEA
ISO 		(PMID:17346996) Ensembl
UniProt		 PMID:17346996 GO_REF:0000107 NCBI chrNW_004936664:2,668,708...2,676,608
Ensembl chrNW_004936664:2,669,920...2,676,587 		JBrowse link
Term paths to the root
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Term Annotations click to browse term
  biological_process 17733
    cellular process 17274
      metabolic process 11561
        primary metabolic process 10200
          lipid metabolic process 1329
            membrane lipid metabolic process 207
              glycolipid metabolic process + 104
              membrane lipid biosynthetic process + 146
              membrane lipid catabolic process + 40
              regulation of membrane lipid metabolic process + 19
              sphingolipid metabolic process + 154
paths to the root