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ONTOLOGY REPORT - ANNOTATIONS

Term:membrane lipid metabolic process
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Accession:GO:0006643 term browser browse the term
Definition:The chemical reactions and pathways involving membrane lipids, any lipid found in or associated with a biological membrane.
Synonyms:exact_synonym: membrane lipid metabolism

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membrane lipid metabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Agmo alkylglycerol monooxygenase involved_in IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004624739:14,587,427...14,775,057 JBrowse link
G Cnpy4 canopy FGF signaling regulator 4 acts_upstream_of_or_within ISO (PMID:35504891) MGI PMID:35504891 NCBI chrNW_004624740:16,872,158...16,877,401
Ensembl chrNW_004624740:16,872,158...16,877,388 		JBrowse link
G Psap prosaposin acts_upstream_of_or_within ISO (PMID:14684827) MGI PMID:14684827 NCBI chrNW_004624754:5,725,697...5,753,575
Ensembl chrNW_004624754:5,726,681...5,753,575 		JBrowse link
3-keto-sphinganine metabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Kdsr 3-ketodihydrosphingosine reductase involved_in
acts_upstream_of_or_within 		IEA
ISO 		(PMID:15364918) TreeGrafter
InterPro
MGI		 PMID:15364918 GO_REF:0000002 GO_REF:0000118 NCBI chrNW_004624792:9,038,076...9,081,650
Ensembl chrNW_004624792:9,040,999...9,082,154 		JBrowse link
ceramide biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ace2 angiotensin converting enzyme 2 acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chrNW_004624829:344,823...391,451
Ensembl chrNW_004624829:344,933...391,527 		JBrowse link
G Agk acylglycerol kinase acts_upstream_of_or_within
involved_in 		ISO
IEA 		(PMID:15252046) MGI
TreeGrafter		 PMID:15252046 GO_REF:0000118 NCBI chrNW_004624765:21,572,797...21,666,424
Ensembl chrNW_004624765:21,572,714...21,668,516 		JBrowse link
G Alox12b arachidonate 12-lipoxygenase, 12R type involved_in ISO (PMID:17403930) UniProt PMID:17403930 NCBI chrNW_004624786:10,647,450...10,659,301
Ensembl chrNW_004624786:10,647,175...10,659,337 		JBrowse link
G Aloxe3 arachidonate epidermal lipoxygenase 3 acts_upstream_of_or_within
involved_in 		ISO (PMID:22832496) MGI
UniProt		 PMID:22832496 NCBI chrNW_004624786:10,666,255...10,689,204
Ensembl chrNW_004624786:10,666,423...10,688,376 		JBrowse link
G Asah1 N-acylsphingosine amidohydrolase 1 involved_in ISO (PMID:12764132), (PMID:12815059) UniProt PMID:12764132 PMID:12815059 NCBI chrNW_004624769:21,112,705...21,140,004
Ensembl chrNW_004624769:21,112,851...21,138,831 		JBrowse link
G Asah2 N-acylsphingosine amidohydrolase 2 involved_in IEA UniProt GO_REF:0000117 NCBI chrNW_004624791:12,906,908...13,059,033
Ensembl chrNW_004624791:12,907,485...13,059,005 		JBrowse link
G Cers1 ceramide synthase 1 involved_in IEA UniProt
TreeGrafter
InterPro		 GO_REF:0000002 GO_REF:0000117 GO_REF:0000118 NCBI chrNW_004624908:1,937,007...1,949,780
Ensembl chrNW_004624908:1,941,393...1,949,760 		JBrowse link
G Cers2 ceramide synthase 2 involved_in
acts_upstream_of_or_within 		IEA
ISO 		(PMID:15823095) TreeGrafter
MGI
UniProt
InterPro		 PMID:15823095 GO_REF:0000002 GO_REF:0000117 GO_REF:0000118 NCBI chrNW_004624772:18,851,681...18,855,267
Ensembl chrNW_004624772:18,851,612...18,855,255 		JBrowse link
G Cers3 ceramide synthase 3 involved_in IEA TreeGrafter
InterPro
UniProt		 GO_REF:0000002 GO_REF:0000117 GO_REF:0000118 NCBI chrNW_004624768:4,150,680...4,287,741
Ensembl chrNW_004624768:4,151,925...4,288,195 		JBrowse link
G Cers4 ceramide synthase 4 involved_in
acts_upstream_of_or_within 		IEA
ISO 		(PMID:12912983), (PMID:15823095) TreeGrafter
MGI
UniProt
InterPro		 PMID:12912983 PMID:15823095 GO_REF:0000002 GO_REF:0000117 GO_REF:0000118 NCBI chrNW_004624828:1,074,920...1,092,607
Ensembl chrNW_004624828:1,074,942...1,092,647 		JBrowse link
G Cers5 ceramide synthase 5 involved_in IEA Ensembl
TreeGrafter
UniProt
InterPro		 GO_REF:0000002 GO_REF:0000107 GO_REF:0000117 GO_REF:0000118 NCBI chrNW_004624816:2,150,409...2,190,099
Ensembl chrNW_004624816:2,150,535...2,182,141 		JBrowse link
G Cers6 ceramide synthase 6 acts_upstream_of_or_within
involved_in 		ISO
IEA 		(PMID:15823095) MGI
TreeGrafter
Ensembl
UniProt
InterPro		 PMID:15823095 GO_REF:0000002 GO_REF:0000107 GO_REF:0000117 GO_REF:0000118 NCBI chrNW_004624787:6,208,976...6,511,575
Ensembl chrNW_004624787:6,208,478...6,511,708 		JBrowse link
G Degs1 delta 4-desaturase, sphingolipid 1 acts_upstream_of_or_within
involved_in 		ISO
IEA 		(PMID:22984457) MGI
TreeGrafter		 PMID:22984457 GO_REF:0000118 NCBI chrNW_004624835:5,880,855...5,889,295
Ensembl chrNW_004624835:5,880,301...5,889,294 		JBrowse link
G Degs2 delta 4-desaturase, sphingolipid 2 involved_in
acts_upstream_of_or_within 		IEA
ISO 		(PMID:16571104) TreeGrafter
MGI		 PMID:16571104 GO_REF:0000118 NCBI chrNW_004624734:3,913,159...3,925,309
Ensembl chrNW_004624734:3,913,169...3,926,156 		JBrowse link
G Elovl1 ELOVL fatty acid elongase 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004624892:2,679,872...2,684,499
Ensembl chrNW_004624892:2,675,421...2,684,622 		JBrowse link
G Fa2h fatty acid 2-hydroxylase involved_in ISO (PMID:22517924)
(PMID:15337768) 		UniProt PMID:15337768 PMID:22517924 NCBI chrNW_004624746:12,125,709...12,186,254
Ensembl chrNW_004624746:12,125,506...12,186,671 		JBrowse link
G Gba1 glucosylceramidase beta 1 involved_in ISO (PMID:19279011) BHF-UCL PMID:19279011 NCBI chrNW_004624885:2,315,371...2,321,327
Ensembl chrNW_004624885:2,315,142...2,321,327 		JBrowse link
G Kdsr 3-ketodihydrosphingosine reductase involved_in ISO (PMID:16120614) UOS_MCB PMID:16120614 NCBI chrNW_004624792:9,038,076...9,081,650
Ensembl chrNW_004624792:9,040,999...9,082,154 		JBrowse link
G LOC101706763 cytochrome P450 4F22 involved_in IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004624901:2,596,387...2,619,965
Ensembl chrNW_004624901:2,597,093...2,619,115 		JBrowse link
G Mecr mitochondrial trans-2-enoyl-CoA reductase acts_upstream_of ISO (PMID:37653044) UniProt PMID:37653044 NCBI chrNW_004624764:12,954,673...12,989,711
Ensembl chrNW_004624764:12,954,115...12,989,755 		JBrowse link
G P2rx1 purinergic receptor P2X 1 acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chrNW_004624786:6,503,367...6,520,802
Ensembl chrNW_004624786:6,504,250...6,521,821 		JBrowse link
G P2rx7 purinergic receptor P2X 7 acts_upstream_of_or_within ISO (PMID:16325464) MGI PMID:16325464 NCBI chrNW_004624747:21,725,813...21,768,123
Ensembl chrNW_004624747:21,725,395...21,759,453 		JBrowse link
G Pnpla1 patatin like domain 1, omega-hydroxyceramide transacylase involved_in ISO (PMID:27751867) UniProt PMID:27751867 NCBI chrNW_004624754:21,370,872...21,410,804
Ensembl chrNW_004624754:21,375,463...21,410,961 		JBrowse link
G Samd8 sterile alpha motif domain containing 8 acts_upstream_of_or_within
involved_in 		ISO
IEA 		(PMID:25605874), (PMID:25667419)
(PMID:25667419) 		MGI
UniProt
TreeGrafter		 PMID:25605874 PMID:25667419 GO_REF:0000117 GO_REF:0000118 NCBI chrNW_004624754:8,466,049...8,553,721
Ensembl chrNW_004624754:8,465,981...8,550,666 		JBrowse link
G Sgms1 sphingomyelin synthase 1 acts_upstream_of_or_within
involved_in 		IEA Ensembl
TreeGrafter		 GO_REF:0000107 GO_REF:0000118 NCBI chrNW_004624791:13,096,268...13,490,220
Ensembl chrNW_004624791:13,097,808...13,146,544 		JBrowse link
G Sgms2 sphingomyelin synthase 2 involved_in
acts_upstream_of_or_within 		IEA
ISO 		(PMID:25605874) TreeGrafter
MGI		 PMID:25605874 GO_REF:0000118 NCBI chrNW_004624830:1,498,700...1,543,112
Ensembl chrNW_004624830:1,502,336...1,542,134 		JBrowse link
G Smpd1 sphingomyelin phosphodiesterase 1 involved_in ISO
IEA 		RGD
UniProt
Ensembl
TreeGrafter		 PMID:17261082 GO_REF:0000107 GO_REF:0000117 GO_REF:0000118 RGD:1601344 NCBI chrNW_004624817:7,909,777...7,913,419
Ensembl chrNW_004624817:7,909,468...7,913,417 		JBrowse link
G Smpd2 sphingomyelin phosphodiesterase 2 ISO RGD PMID:12473648 RGD:1581395 NCBI chrNW_004624916:697,861...701,015
Ensembl chrNW_004624916:697,006...701,012 		JBrowse link
G Smpd4 sphingomyelin phosphodiesterase 4 involved_in IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004624945:566,203...592,254 JBrowse link
G Sptlc1 serine palmitoyltransferase long chain base subunit 1 acts_upstream_of_or_within
involved_in 		ISO
IEA 		(PMID:25691431)
(PMID:16216550) 		MGI
TreeGrafter		 PMID:16216550 PMID:25691431 GO_REF:0000118 NCBI chrNW_004624868:317,992...393,776
Ensembl chrNW_004624868:318,059...393,773 		JBrowse link
G Sptlc2 serine palmitoyltransferase long chain base subunit 2 acts_upstream_of_or_within
involved_in 		ISO
IEA 		(PMID:25691431)
(PMID:16216550) 		MGI
TreeGrafter		 PMID:16216550 PMID:25691431 GO_REF:0000118 NCBI chrNW_004624734:24,281,482...24,400,870 JBrowse link
G Sptlc3 serine palmitoyltransferase long chain base subunit 3 involved_in IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004624741:13,956,688...14,152,127
Ensembl chrNW_004624741:13,956,570...14,152,600 		JBrowse link
G Sptssa serine palmitoyltransferase small subunit A acts_upstream_of_or_within
involved_in 		ISO
IEA 		(PMID:25691431) MGI
TreeGrafter		 PMID:25691431 GO_REF:0000118 NCBI chrNW_004624838:2,207,003...2,231,838
Ensembl chrNW_004624838:2,206,917...2,231,518 		JBrowse link
G Sptssb serine palmitoyltransferase small subunit B acts_upstream_of_or_within
involved_in 		IEA Ensembl
TreeGrafter		 GO_REF:0000107 GO_REF:0000118 NCBI chrNW_004624730:39,280,846...39,324,174
Ensembl chrNW_004624730:39,291,652...39,323,139 		JBrowse link
G Tlcd3b TLC domain containing 3B acts_upstream_of_or_within
involved_in 		IEA Ensembl
TreeGrafter		 GO_REF:0000107 GO_REF:0000118 NCBI chrNW_004624782:13,203,954...13,212,174
Ensembl chrNW_004624782:13,203,963...13,213,797 		JBrowse link
ceramide catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Acer1 alkaline ceramidase 1 involved_in
acts_upstream_of_or_within 		IEA
ISO 		(PMID:12783875) TreeGrafter
MGI		 PMID:12783875 GO_REF:0000118 NCBI chrNW_004624828:4,022,288...4,046,235
Ensembl chrNW_004624828:4,041,875...4,045,675 		JBrowse link
G Acer2 alkaline ceramidase 2 involved_in IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004624736:23,363,806...23,556,247
Ensembl chrNW_004624736:23,363,983...23,411,100 		JBrowse link
G Acer3 alkaline ceramidase 3 involved_in ISO (PMID:20207939), (PMID:26792856)
(PMID:26474409)
(PMID:30575723) 		UniProt PMID:20207939 PMID:26474409 PMID:26792856 PMID:30575723 NCBI chrNW_004624863:37,148...96,550
Ensembl chrNW_004624863:37,148...95,211 		JBrowse link
G Asah1 N-acylsphingosine amidohydrolase 1 involved_in ISO (PMID:23770692)
(PMID:12815059)
(PMID:10610716)
(PMID:9653654) 		UniProt PMID:9653654 PMID:10610716 PMID:12815059 PMID:23770692 NCBI chrNW_004624769:21,112,705...21,140,004
Ensembl chrNW_004624769:21,112,851...21,138,831 		JBrowse link
G Asah2 N-acylsphingosine amidohydrolase 2 involved_in IEA InterPro
UniProt
TreeGrafter		 GO_REF:0000002 GO_REF:0000117 GO_REF:0000118 NCBI chrNW_004624791:12,906,908...13,059,033
Ensembl chrNW_004624791:12,907,485...13,059,005 		JBrowse link
ceramide metabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Abca12 ATP binding cassette subfamily A member 12 involved_in ISO (PMID:17927575)
(PMID:20489143) 		UniProt PMID:17927575 PMID:20489143 NCBI chrNW_004624765:1,009,883...1,198,225
Ensembl chrNW_004624765:1,010,287...1,197,910 		JBrowse link
G Acer1 alkaline ceramidase 1 involved_in IEA InterPro GO_REF:0000002 NCBI chrNW_004624828:4,022,288...4,046,235
Ensembl chrNW_004624828:4,041,875...4,045,675 		JBrowse link
G Acer2 alkaline ceramidase 2 involved_in IEA InterPro GO_REF:0000002 NCBI chrNW_004624736:23,363,806...23,556,247
Ensembl chrNW_004624736:23,363,983...23,411,100 		JBrowse link
G Acer3 alkaline ceramidase 3 involved_in IEA InterPro GO_REF:0000002 NCBI chrNW_004624863:37,148...96,550
Ensembl chrNW_004624863:37,148...95,211 		JBrowse link
G Asah2 N-acylsphingosine amidohydrolase 2 involved_in IEA UniProt GO_REF:0000117 NCBI chrNW_004624791:12,906,908...13,059,033
Ensembl chrNW_004624791:12,907,485...13,059,005 		JBrowse link
G Cerk ceramide kinase involved_in IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004624752:3,285,649...3,328,131
Ensembl chrNW_004624752:3,285,637...3,326,738 		JBrowse link
G Cert1 ceramide transporter 1 acts_upstream_of_or_within ISO (PMID:19139267) MGI PMID:19139267 NCBI chrNW_004624951:718,380...828,220
Ensembl chrNW_004624951:721,411...828,150 		JBrowse link
G Cln8 CLN8 transmembrane ER and ERGIC protein involved_in ISO (PMID:16086686) UniProt PMID:16086686 NCBI chrNW_004624861:960,643...977,292
Ensembl chrNW_004624861:968,219...977,467 		JBrowse link
G Fut5 fucosyltransferase 5 involved_in ISO (PMID:17604274), (PMID:7721776), (PMID:9737988) BHF-UCL PMID:7721776 PMID:9737988 PMID:17604274 NCBI chrNW_004624828:4,343,663...4,348,562 JBrowse link
G Fut7 fucosyltransferase 7 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004624760:876,048...877,984
Ensembl chrNW_004624760:876,059...877,574 		JBrowse link
G LOC101706228 ORM1-like protein 1 involved_in IEA UniProt GO_REF:0000104 NCBI chrNW_004624753:15,730,590...15,731,228 JBrowse link
G LOC106007497 alkaline ceramidase 3-like involved_in IEA InterPro GO_REF:0000002 NCBI chrNW_004624817:70...116,261 JBrowse link
G Ormdl2 ORMDL sphingolipid biosynthesis regulator 2 involved_in IEA UniProt GO_REF:0000104 NCBI chrNW_004624802:12,197,114...12,200,044
Ensembl chrNW_004624802:12,197,114...12,199,983 		JBrowse link
G Ormdl3 ORMDL sphingolipid biosynthesis regulator 3 involved_in IEA UniProt GO_REF:0000104 NCBI chrNW_004624795:3,210,382...3,216,130
Ensembl chrNW_004624795:3,209,605...3,217,539 		JBrowse link
G Pla2g15 phospholipase A2 group XV acts_upstream_of_or_within
involved_in 		ISO (PMID:11790796)
PMID:15294901
(PMID:20410020), (PMID:29724779)
(PMID:16837646), (PMID:20410020) 		MGI
UniProt		 PMID:11790796 PMID:15294901 PMID:16837646 PMID:20410020 PMID:29724779 RGD:1304489 NCBI chrNW_004624746:18,048,370...18,063,297
Ensembl chrNW_004624746:18,048,246...18,063,291 		JBrowse link
G Plpp1 phospholipid phosphatase 1 involved_in ISO (PMID:10359651)
PMID:8663293
(PMID:9305923), (PMID:9705349) 		UniProt PMID:8663293 PMID:9305923 PMID:9705349 PMID:10359651 RGD:15090855 RGD:15090857 NCBI chrNW_004624759:3,780,904...3,868,867
Ensembl chrNW_004624759:3,780,826...3,868,869 		JBrowse link
G Plpp2 phospholipid phosphatase 2 involved_in ISO (PMID:9705349) UniProt PMID:9705349 NCBI chrNW_004624828:8,058,688...8,062,679
Ensembl chrNW_004624828:8,058,329...8,062,677 		JBrowse link
G Plpp3 phospholipid phosphatase 3 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004624862:3,550,498...3,627,061
Ensembl chrNW_004624862:3,550,968...3,627,058 		JBrowse link
G Psap prosaposin acts_upstream_of_or_within ISO (PMID:17353235)
(PMID:15345707) 		MGI PMID:15345707 PMID:17353235 NCBI chrNW_004624754:5,725,697...5,753,575
Ensembl chrNW_004624754:5,726,681...5,753,575 		JBrowse link
G Sgpl1 sphingosine-1-phosphate lyase 1 involved_in ISO (PMID:14570870) UniProt PMID:14570870 NCBI chrNW_004624754:4,844,472...4,889,006
Ensembl chrNW_004624754:4,844,552...4,886,709 		JBrowse link
G Smpd1 sphingomyelin phosphodiesterase 1 acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chrNW_004624817:7,909,777...7,913,419
Ensembl chrNW_004624817:7,909,468...7,913,417 		JBrowse link
G Smpd2 sphingomyelin phosphodiesterase 2 involved_in IEA UniProt GO_REF:0000117 NCBI chrNW_004624916:697,861...701,015
Ensembl chrNW_004624916:697,006...701,012 		JBrowse link
G Smpd3 sphingomyelin phosphodiesterase 3 acts_upstream_of_or_within ISO (PMID:22383528), (PMID:23046545) MGI PMID:22383528 PMID:23046545 NCBI chrNW_004624746:17,857,779...17,948,469
Ensembl chrNW_004624746:17,920,835...17,948,468 		JBrowse link
G St6galnac6 ST6 N-acetylgalactosaminide alpha-2,6-sialyltransferase 6 involved_in IEA UniProt GO_REF:0000117 NCBI chrNW_004624760:7,666,798...7,678,926
Ensembl chrNW_004624760:7,667,189...7,677,662 		JBrowse link
G Tm9sf2 transmembrane 9 superfamily member 2 involved_in ISO (PMID:30660999) UniProt PMID:30660999 NCBI chrNW_004624793:11,515,047...11,644,073
Ensembl chrNW_004624793:11,511,446...11,579,008 		JBrowse link
ceramide phosphoethanolamine biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Samd8 sterile alpha motif domain containing 8 acts_upstream_of_or_within ISO (PMID:25667419) MGI PMID:25667419 NCBI chrNW_004624754:8,466,049...8,553,721
Ensembl chrNW_004624754:8,465,981...8,550,666 		JBrowse link
G Sgms2 sphingomyelin synthase 2 acts_upstream_of_or_within ISO (PMID:25667419) MGI PMID:25667419 NCBI chrNW_004624830:1,498,700...1,543,112
Ensembl chrNW_004624830:1,502,336...1,542,134 		JBrowse link
ceramide phosphoethanolamine catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Etnppl ethanolamine-phosphate phospho-lyase acts_upstream_of_or_within ISO (PMID:34048714) MGI PMID:34048714 NCBI chrNW_004624830:923,034...938,773
Ensembl chrNW_004624830:924,185...938,388 		JBrowse link
dolichol phosphate mannose biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Dolk dolichol kinase involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004624760:6,106,890...6,108,939
Ensembl chrNW_004624760:6,107,162...6,108,778 		JBrowse link
G Dpm1 dolichyl-phosphate mannosyltransferase subunit 1, catalytic involved_in ISO (PMID:10835346) UniProt PMID:10835346 NCBI chrNW_004624790:4,798,433...4,819,192
Ensembl chrNW_004624790:4,798,426...4,819,630 		JBrowse link
G Dpm2 dolichyl-phosphate mannosyltransferase subunit 2, regulatory involved_in IEA InterPro GO_REF:0000002 NCBI chrNW_004624760:7,638,497...7,640,810
Ensembl chrNW_004624760:7,638,437...7,640,810 		JBrowse link
G Dpm3 dolichyl-phosphate mannosyltransferase subunit 3, regulatory involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004624885:2,377,850...2,378,390
Ensembl chrNW_004624885:2,377,880...2,378,390 		JBrowse link
galactolipid catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Pnliprp2 pancreatic lipase related protein 2 involved_in ISO (PMID:15287741), (PMID:17401110), (PMID:18702514), (PMID:20083229) RGD
UniProt		 PMID:8765145 PMID:15287741 PMID:17401110 PMID:18702514 PMID:20083229 RGD:2303162 NCBI chrNW_004624737:29,936,223...29,955,265
Ensembl chrNW_004624737:29,936,277...29,952,794 		JBrowse link
galactosylceramide biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G B3galt1 beta-1,3-galactosyltransferase 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004624787:5,040,161...5,582,911
Ensembl chrNW_004624787:5,578,168...5,579,148 		JBrowse link
G B4galt3 beta-1,4-galactosyltransferase 3 involved_in IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004624794:205,726...212,141
Ensembl chrNW_004624794:206,591...212,141 		JBrowse link
G Fa2h fatty acid 2-hydroxylase involved_in IEA UniProt GO_REF:0000117 NCBI chrNW_004624746:12,125,709...12,186,254
Ensembl chrNW_004624746:12,125,506...12,186,671 		JBrowse link
G Gal3st1 galactose-3-O-sulfotransferase 1 involved_in
acts_upstream_of_or_within 		IEA
ISO 		(PMID:10727929) TreeGrafter
MGI		 PMID:10727929 GO_REF:0000118 NCBI chrNW_004625705:1,409...4,810
Ensembl chrNW_004625705:2,469...4,916 		JBrowse link
G Ugt8 UDP glycosyltransferase 8 involved_in IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004624867:1,182,674...1,255,714
Ensembl chrNW_004624867:1,182,589...1,255,796 		JBrowse link
galactosylceramide catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Galc galactosylceramidase involved_in
acts_upstream_of_or_within 		IEA
ISO 		(PMID:11371512) TreeGrafter
UniProt
MGI
InterPro		 PMID:11371512 GO_REF:0000002 GO_REF:0000117 GO_REF:0000118 NCBI chrNW_004624734:14,355,349...14,462,869
Ensembl chrNW_004624734:14,355,435...14,407,087 		JBrowse link
G Psap prosaposin acts_upstream_of_or_within ISO (PMID:11371512) MGI PMID:11371512 NCBI chrNW_004624754:5,725,697...5,753,575
Ensembl chrNW_004624754:5,726,681...5,753,575 		JBrowse link
galactosylceramide metabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Gal3st1 galactose-3-O-sulfotransferase 1 involved_in ISO (PMID:9030544) UniProt PMID:9030544 NCBI chrNW_004625705:1,409...4,810
Ensembl chrNW_004625705:2,469...4,916 		JBrowse link
ganglioside biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G B3galt4 beta-1,3-galactosyltransferase 4 involved_in ISO (PMID:9582303) BHF-UCL PMID:9582303 NCBI chrNW_004624754:23,542,500...23,543,855 JBrowse link
G B4galnt1 beta-1,4-N-acetyl-galactosaminyltransferase 1 involved_in
acts_upstream_of_or_within 		IEA
ISO 		(PMID:10021458) TreeGrafter
MGI		 PMID:10021458 GO_REF:0000118 NCBI chrNW_004624802:10,329,295...10,337,205
Ensembl chrNW_004624802:10,329,296...10,337,283 		JBrowse link
G B4galt5 beta-1,4-galactosyltransferase 5 involved_in ISO (PMID:30114188) UniProt PMID:30114188 NCBI chrNW_004624790:5,770,586...5,792,036
Ensembl chrNW_004624790:5,766,903...5,789,140 		JBrowse link
G B4galt6 beta-1,4-galactosyltransferase 6 involved_in ISO (PMID:30114188) UniProt PMID:30114188 NCBI chrNW_004624770:1,119,202...1,239,127
Ensembl chrNW_004624770:1,160,120...1,240,016 		JBrowse link
G St3gal1 ST3 beta-galactoside alpha-2,3-sialyltransferase 1 involved_in ISO (PMID:8027041)
(PMID:8144500) 		UniProt PMID:8027041 PMID:8144500 NCBI chrNW_004624735:22,510,500...22,589,666
Ensembl chrNW_004624735:22,528,976...22,589,666 		JBrowse link
G St3gal2 ST3 beta-galactoside alpha-2,3-sialyltransferase 2 involved_in ISO (PMID:8920913)
(PMID:8144500)
(PMID:22735313) 		UniProt PMID:8144500 PMID:8920913 PMID:22735313 RGD:68307 NCBI chrNW_004624746:12,623,966...12,680,430
Ensembl chrNW_004624746:12,623,730...12,680,436 		JBrowse link
G St3gal3 ST3 beta-galactoside alpha-2,3-sialyltransferase 3 involved_in ISO (PMID:22735313) UniProt PMID:22735313 NCBI chrNW_004624892:2,984,329...3,213,017
Ensembl chrNW_004624892:2,984,351...3,213,021 		JBrowse link
G St6galnac3 ST6 N-acetylgalactosaminide alpha-2,6-sialyltransferase 3 involved_in IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004624742:20,405,342...20,928,792
Ensembl chrNW_004624742:20,407,410...20,928,766 		JBrowse link
G St6galnac4 ST6 N-acetylgalactosaminide alpha-2,6-sialyltransferase 4 involved_in IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004624760:7,652,907...7,660,858
Ensembl chrNW_004624760:7,652,881...7,662,382 		JBrowse link
G St6galnac5 ST6 N-acetylgalactosaminide alpha-2,6-sialyltransferase 5 involved_in IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004624742:20,021,252...20,188,542
Ensembl chrNW_004624742:20,023,494...20,188,072 		JBrowse link
G St6galnac6 ST6 N-acetylgalactosaminide alpha-2,6-sialyltransferase 6 acts_upstream_of_or_within
involved_in 		ISO
IEA 		(PMID:10702226) MGI
TreeGrafter		 PMID:10702226 GO_REF:0000118 NCBI chrNW_004624760:7,666,798...7,678,926
Ensembl chrNW_004624760:7,667,189...7,677,662 		JBrowse link
G St8sia2 ST8 alpha-N-acetyl-neuraminide alpha-2,8-sialyltransferase 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004624768:11,238,134...11,302,280
Ensembl chrNW_004624768:11,234,281...11,302,237 		JBrowse link
G St8sia3 ST8 alpha-N-acetyl-neuraminide alpha-2,8-sialyltransferase 3 involved_in ISO (PMID:10766765)
(PMID:7782326) 		BHF-UCL
UniProt		 PMID:7782326 PMID:10766765 NCBI chrNW_004624792:2,881,545...2,897,891
Ensembl chrNW_004624792:2,881,068...2,888,943 		JBrowse link
G St8sia4 ST8 alpha-N-acetyl-neuraminide alpha-2,8-sialyltransferase 4 involved_in ISO (PMID:10766765) BHF-UCL PMID:10766765 NCBI chrNW_004624743:19,225,065...19,313,177
Ensembl chrNW_004624743:19,228,696...19,313,243 		JBrowse link
G St8sia6 ST8 alpha-N-acetyl-neuraminide alpha-2,8-sialyltransferase 6 involved_in ISO (PMID:11980897) BHF-UCL PMID:11980897 NCBI chrNW_004624796:10,383,947...10,577,117
Ensembl chrNW_004624796:10,458,466...10,570,959 		JBrowse link
ganglioside catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Glb1 galactosidase beta 1 involved_in IEA UniProt GO_REF:0000117 NCBI chrNW_004624788:10,970,657...11,110,839
Ensembl chrNW_004624788:10,970,652...11,111,722 		JBrowse link
G Gm2a GM2 ganglioside activator involved_in
acts_upstream_of_or_within 		IEA
ISO 		(PMID:9223328) TreeGrafter
MGI
InterPro		 PMID:9223328 GO_REF:0000002 GO_REF:0000118 NCBI chrNW_004624733:41,141,507...41,152,957
Ensembl chrNW_004624733:41,141,552...41,156,188 		JBrowse link
G Hexa hexosaminidase subunit alpha acts_upstream_of_or_within
involved_in 		ISO
IEA 		(PMID:8789434), (PMID:9645704)
(PMID:7937929), (PMID:9223328) 		MGI
TreeGrafter		 PMID:7937929 PMID:8789434 PMID:9223328 PMID:9645704 GO_REF:0000118 NCBI chrNW_004624781:1,686,818...1,706,044
Ensembl chrNW_004624781:1,686,384...1,714,684 		JBrowse link
G Hexb hexosaminidase subunit beta acts_upstream_of_or_within
involved_in 		IEA Ensembl
TreeGrafter		 GO_REF:0000107 GO_REF:0000118 NCBI chrNW_004624924:195,406...219,232
Ensembl chrNW_004624924:195,175...219,278 		JBrowse link
G Neu1 neuraminidase 1 involved_in IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004624754:24,382,509...24,386,410
Ensembl chrNW_004624754:24,382,467...24,387,874 		JBrowse link
G Neu2 neuraminidase 2 involved_in IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004624843:5,666,959...5,671,833
Ensembl chrNW_004624843:5,665,448...5,670,832 		JBrowse link
G Neu3 neuraminidase 3 involved_in IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004624817:2,107,893...2,133,626 JBrowse link
G Neu4 neuraminidase 4 involved_in IEA TreeGrafter
UniProt		 GO_REF:0000117 GO_REF:0000118 NCBI chrNW_004624847:5,716,165...5,720,542
Ensembl chrNW_004624847:5,716,659...5,720,542 		JBrowse link
ganglioside metabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Abca2 ATP binding cassette subfamily A member 2 involved_in ISO (PMID:17488728) UniProt PMID:17488728 NCBI chrNW_004624760:880,216...898,753
Ensembl chrNW_004624760:880,148...898,751 		JBrowse link
G Cln6 CLN6 transmembrane ER protein involved_in ISO (PMID:16857350) UniProt PMID:16857350 NCBI chrNW_004624781:4,866,896...4,879,321
Ensembl chrNW_004624781:4,866,927...4,879,321 		JBrowse link
G Gm2a GM2 ganglioside activator ISO RGD PMID:9770472 RGD:1598995 NCBI chrNW_004624733:41,141,507...41,152,957
Ensembl chrNW_004624733:41,141,552...41,156,188 		JBrowse link
G Itgb8 integrin subunit beta 8 acts_upstream_of_or_within ISO (PMID:16251442) MGI PMID:16251442 NCBI chrNW_004624739:10,164,645...10,261,732
Ensembl chrNW_004624739:10,168,495...10,259,804 		JBrowse link
G Naglu N-acetyl-alpha-glucosaminidase acts_upstream_of_or_within ISO (PMID:21408219) MGI PMID:21408219 NCBI chrNW_004624795:1,553,582...1,558,110
Ensembl chrNW_004624795:1,553,037...1,558,197 		JBrowse link
globoside biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G A4galt alpha 1,4-galactosyltransferase (P1PK blood group) acts_upstream_of_or_within ISO (PMID:22875802)
(PMID:16476743) 		MGI PMID:16476743 PMID:22875802 NCBI chrNW_004624752:6,127,296...6,150,474
Ensembl chrNW_004624752:6,144,720...6,145,781 		JBrowse link
G Plekha8 pleckstrin homology domain containing A8 involved_in ISO (PMID:23913272) UOS_MCB PMID:23913272 NCBI chrNW_004624739:692,511...769,161 JBrowse link
G St3gal2 ST3 beta-galactoside alpha-2,3-sialyltransferase 2 involved_in ISO (PMID:12716912) UniProt PMID:12716912 NCBI chrNW_004624746:12,623,966...12,680,430
Ensembl chrNW_004624746:12,623,730...12,680,436 		JBrowse link
globoside metabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Gbgt1 globoside alpha-1,3-N-acetylgalactosaminyltransferase 1 (FORS blood group) involved_in ISO (PMID:8855242) UniProt PMID:8855242 NCBI chrNW_004624760:3,332,538...3,336,964 JBrowse link
glucosylceramide biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Fa2h fatty acid 2-hydroxylase involved_in ISO (PMID:21628453) UniProt PMID:21628453 NCBI chrNW_004624746:12,125,709...12,186,254
Ensembl chrNW_004624746:12,125,506...12,186,671 		JBrowse link
G Ugcg UDP-glucose ceramide glucosyltransferase involved_in IEA TreeGrafter
Ensembl		 GO_REF:0000107 GO_REF:0000118 NCBI chrNW_004624760:23,059,141...23,094,013
Ensembl chrNW_004624760:23,056,929...23,094,010 		JBrowse link
glucosylceramide catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Gba1 glucosylceramidase beta 1 involved_in IEA TreeGrafter
UniProt		 GO_REF:0000117 GO_REF:0000118 NCBI chrNW_004624885:2,315,371...2,321,327
Ensembl chrNW_004624885:2,315,142...2,321,327 		JBrowse link
G Gba2 glucosylceramidase beta 2 involved_in IEA Ensembl
UniProt
InterPro		 GO_REF:0000002 GO_REF:0000107 GO_REF:0000117 NCBI chrNW_004624868:5,045,566...5,056,419
Ensembl chrNW_004624868:5,045,594...5,056,416 		JBrowse link
glucosylceramide metabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G B3galt1 beta-1,3-galactosyltransferase 1 involved_in ISO (PMID:9582303) BHF-UCL PMID:9582303 NCBI chrNW_004624787:5,040,161...5,582,911
Ensembl chrNW_004624787:5,578,168...5,579,148 		JBrowse link
G B3galt2 beta-1,3-galactosyltransferase 2 involved_in ISO (PMID:9582303) BHF-UCL PMID:9582303 NCBI chrNW_004624814:375,039...382,732
Ensembl chrNW_004624814:375,040...381,702 		JBrowse link
G B4galt3 beta-1,4-galactosyltransferase 3 involved_in ISO (PMID:9405390) BHF-UCL PMID:9405390 NCBI chrNW_004624794:205,726...212,141
Ensembl chrNW_004624794:206,591...212,141 		JBrowse link
G Gba1 glucosylceramidase beta 1 acts_upstream_of_or_within ISO (PMID:17954912), (PMID:18346921) MGI PMID:17954912 PMID:18346921 NCBI chrNW_004624885:2,315,371...2,321,327
Ensembl chrNW_004624885:2,315,142...2,321,327 		JBrowse link
G Psap prosaposin acts_upstream_of_or_within ISO (PMID:17353235) MGI PMID:17353235 NCBI chrNW_004624754:5,725,697...5,753,575
Ensembl chrNW_004624754:5,726,681...5,753,575 		JBrowse link
glycolipid biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Gal3st1 galactose-3-O-sulfotransferase 1 involved_in IEA InterPro GO_REF:0000002 NCBI chrNW_004625705:1,409...4,810
Ensembl chrNW_004625705:2,469...4,916 		JBrowse link
G Gal3st2 galactose-3-O-sulfotransferase 2 involved_in IEA InterPro GO_REF:0000002 NCBI chrNW_004624847:5,688,903...5,700,300
Ensembl chrNW_004624847:5,696,086...5,698,750 		JBrowse link
G Gal3st3 galactose-3-O-sulfotransferase 3 involved_in IEA InterPro GO_REF:0000002 NCBI chrNW_004624767:20,342,925...20,350,892
Ensembl chrNW_004624767:20,342,446...20,350,842 		JBrowse link
G Gal3st4 galactose-3-O-sulfotransferase 4 involved_in IEA InterPro GO_REF:0000002 NCBI chrNW_004624740:16,741,482...16,748,050 JBrowse link
G Gba1 glucosylceramidase beta 1 involved_in ISO (PMID:24211208), (PMID:26724485) UniProt PMID:24211208 PMID:26724485 NCBI chrNW_004624885:2,315,371...2,321,327
Ensembl chrNW_004624885:2,315,142...2,321,327 		JBrowse link
G Gba2 glucosylceramidase beta 2 involved_in ISO (PMID:26724485) UniProt PMID:26724485 NCBI chrNW_004624868:5,045,566...5,056,419
Ensembl chrNW_004624868:5,045,594...5,056,416 		JBrowse link
G Sccpdh saccharopine dehydrogenase (putative) involved_in IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004624771:12,935,789...12,969,444
Ensembl chrNW_004624771:12,935,789...12,969,425 		JBrowse link
G Slc35c1 solute carrier family 35 member C1 acts_upstream_of_or_within_negative_effect ISO (PMID:18308723) MGI PMID:18308723 NCBI chrNW_004624767:2,665,046...2,673,286
Ensembl chrNW_004624767:2,664,245...2,673,425 		JBrowse link
G St3gal2 ST3 beta-galactoside alpha-2,3-sialyltransferase 2 involved_in ISO (PMID:9266697) BHF-UCL PMID:9266697 NCBI chrNW_004624746:12,623,966...12,680,430
Ensembl chrNW_004624746:12,623,730...12,680,436 		JBrowse link
G St3gal4 ST3 beta-galactoside alpha-2,3-sialyltransferase 4 involved_in IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004624812:503,703...551,907
Ensembl chrNW_004624812:509,841...553,894 		JBrowse link
G St3gal6 ST3 beta-galactoside alpha-2,3-sialyltransferase 6 involved_in IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004624789:11,782,895...11,858,065
Ensembl chrNW_004624789:11,822,905...11,857,471 		JBrowse link
G St8sia6 ST8 alpha-N-acetyl-neuraminide alpha-2,8-sialyltransferase 6 acts_upstream_of_or_within ISO (PMID:11980897) MGI PMID:11980897 NCBI chrNW_004624796:10,383,947...10,577,117
Ensembl chrNW_004624796:10,458,466...10,570,959 		JBrowse link
G Ugt8 UDP glycosyltransferase 8 involved_in IEA UniProt GO_REF:0000117 NCBI chrNW_004624867:1,182,674...1,255,714
Ensembl chrNW_004624867:1,182,589...1,255,796 		JBrowse link
glycolipid catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Naga alpha-N-acetylgalactosaminidase involved_in IEA UniProt GO_REF:0000117 NCBI chrNW_004624752:6,682,272...6,689,491
Ensembl chrNW_004624752:6,675,255...6,692,231 		JBrowse link
glycolipid metabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ahdc1 AT-hook DNA binding motif containing 1 acts_upstream_of_or_within ISO (PMID:37819197) MGI PMID:37819197 NCBI chrNW_004624764:11,416,674...11,482,622
Ensembl chrNW_004624764:11,416,674...11,482,601 		JBrowse link
G Fut1 fucosyltransferase 1 (H blood group) involved_in ISO (PMID:14967068) UniProt PMID:14967068 NCBI chrNW_004624832:5,168,170...5,171,176 JBrowse link
G Mfsd8 major facilitator superfamily domain containing 8 acts_upstream_of_or_within ISO (PMID:27654426) MGI PMID:27654426 NCBI chrNW_004624777:8,831,246...8,877,881
Ensembl chrNW_004624777:8,827,851...8,877,873 		JBrowse link
G Psap prosaposin acts_upstream_of_or_within ISO (PMID:12810822) MGI PMID:12810822 NCBI chrNW_004624754:5,725,697...5,753,575
Ensembl chrNW_004624754:5,726,681...5,753,575 		JBrowse link
glycosphingolipid biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G A3galt2 alpha 1,3-galactosyltransferase 2 involved_in
acts_upstream_of_or_within 		ISO
IEA 		PMID:12626403 RGD
UniProt
Ensembl		 PMID:10854427 PMID:12626403 GO_REF:0000107 RGD:1299594 RGD:632674 NCBI chrNW_004624764:16,340,488...16,353,127
Ensembl chrNW_004624764:16,339,948...16,351,846 		JBrowse link
G A4galt alpha 1,4-galactosyltransferase (P1PK blood group) involved_in IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004624752:6,127,296...6,150,474
Ensembl chrNW_004624752:6,144,720...6,145,781 		JBrowse link
G B4galnt1 beta-1,4-N-acetyl-galactosaminyltransferase 1 involved_in ISO PMID:1606358 UniProt PMID:1606358 RGD:21201272 NCBI chrNW_004624802:10,329,295...10,337,205
Ensembl chrNW_004624802:10,329,296...10,337,283 		JBrowse link
G B4galt5 beta-1,4-galactosyltransferase 5 involved_in IEA UniProt GO_REF:0000117 NCBI chrNW_004624790:5,770,586...5,792,036
Ensembl chrNW_004624790:5,766,903...5,789,140 		JBrowse link
G B4galt6 beta-1,4-galactosyltransferase 6 involved_in ISO
IEA 		RGD
UniProt
TreeGrafter		 PMID:9593693 GO_REF:0000117 GO_REF:0000118 RGD:70807 NCBI chrNW_004624770:1,119,202...1,239,127
Ensembl chrNW_004624770:1,160,120...1,240,016 		JBrowse link
G Cers2 ceramide synthase 2 involved_in ISO (PMID:34080016) UOS_MCB PMID:34080016 NCBI chrNW_004624772:18,851,681...18,855,267
Ensembl chrNW_004624772:18,851,612...18,855,255 		JBrowse link
G Degs1 delta 4-desaturase, sphingolipid 1 involved_in ISO (PMID:34080016) UOS_MCB PMID:34080016 NCBI chrNW_004624835:5,880,855...5,889,295
Ensembl chrNW_004624835:5,880,301...5,889,294 		JBrowse link
G Fut4 fucosyltransferase 4 involved_in ISO (PMID:29593094) UniProt PMID:29593094 NCBI chrNW_004624735:39,220,525...39,224,289 JBrowse link
G Fut9 fucosyltransferase 9 involved_in ISO (PMID:29593094) UniProt PMID:29593094 NCBI chrNW_004624810:9,152,805...9,403,382
Ensembl chrNW_004624810:9,154,818...9,217,177 		JBrowse link
G Kdsr 3-ketodihydrosphingosine reductase involved_in ISO (PMID:34080016) UOS_MCB PMID:34080016 NCBI chrNW_004624792:9,038,076...9,081,650
Ensembl chrNW_004624792:9,040,999...9,082,154 		JBrowse link
G St6galnac5 ST6 N-acetylgalactosaminide alpha-2,6-sialyltransferase 5 involved_in ISO (PMID:10521438) BHF-UCL PMID:10521438 NCBI chrNW_004624742:20,021,252...20,188,542
Ensembl chrNW_004624742:20,023,494...20,188,072 		JBrowse link
G St6galnac6 ST6 N-acetylgalactosaminide alpha-2,6-sialyltransferase 6 involved_in IEA UniProt GO_REF:0000117 NCBI chrNW_004624760:7,666,798...7,678,926
Ensembl chrNW_004624760:7,667,189...7,677,662 		JBrowse link
G St8sia5 ST8 alpha-N-acetyl-neuraminide alpha-2,8-sialyltransferase 5 involved_in ISO PMID:1606358 UniProt PMID:1606358 RGD:21201272 NCBI chrNW_004624778:10,293,685...10,390,340
Ensembl chrNW_004624778:10,305,450...10,389,625 		JBrowse link
G Tm9sf2 transmembrane 9 superfamily member 2 involved_in ISO (PMID:30660999) UniProt PMID:30660999 NCBI chrNW_004624793:11,515,047...11,644,073
Ensembl chrNW_004624793:11,511,446...11,579,008 		JBrowse link
G Ugt8 UDP glycosyltransferase 8 involved_in ISO (PMID:34080016) UOS_MCB PMID:34080016 NCBI chrNW_004624867:1,182,674...1,255,714
Ensembl chrNW_004624867:1,182,589...1,255,796 		JBrowse link
glycosphingolipid catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Gla galactosidase alpha involved_in ISO
IEA 		RGD
UniProt		 PMID:34320241 GO_REF:0000117 RGD:401976418 NCBI chrNW_004624902:1,163,360...1,173,087
Ensembl chrNW_004624902:1,163,611...1,173,177 		JBrowse link
glycosphingolipid metabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Abca2 ATP binding cassette subfamily A member 2 involved_in ISO (PMID:17488728) UniProt PMID:17488728 NCBI chrNW_004624760:880,216...898,753
Ensembl chrNW_004624760:880,148...898,751 		JBrowse link
G B4galnt1 beta-1,4-N-acetyl-galactosaminyltransferase 1 involved_in
acts_upstream_of_or_within 		ISO PMID:3140234
(PMID:18308723) 		UniProt
MGI		 PMID:3140234 PMID:18308723 RGD:21201261 NCBI chrNW_004624802:10,329,295...10,337,205
Ensembl chrNW_004624802:10,329,296...10,337,283 		JBrowse link
G Bax BCL2 associated X, apoptosis regulator acts_upstream_of_or_within ISO (PMID:18308723) MGI PMID:18308723 NCBI chrNW_004624832:5,050,222...5,068,565
Ensembl chrNW_004624832:5,050,222...5,055,506 		JBrowse link
G Crem cAMP responsive element modulator acts_upstream_of_or_within ISO (PMID:18308723) MGI PMID:18308723 NCBI chrNW_004624805:6,890,484...6,992,469
Ensembl chrNW_004624805:6,923,557...6,992,450 		JBrowse link
G Hexb hexosaminidase subunit beta acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chrNW_004624924:195,406...219,232
Ensembl chrNW_004624924:195,175...219,278 		JBrowse link
G Kit KIT proto-oncogene, receptor tyrosine kinase acts_upstream_of_or_within ISO (PMID:18308723) MGI PMID:18308723 NCBI chrNW_004624761:14,733,912...14,831,428 JBrowse link
G Map7 microtubule associated protein 7 acts_upstream_of_or_within ISO (PMID:18308723) MGI PMID:18308723 NCBI chrNW_004624886:1,194,440...1,359,644
Ensembl chrNW_004624886:1,216,878...1,360,123 		JBrowse link
G St6galnac3 ST6 N-acetylgalactosaminide alpha-2,6-sialyltransferase 3 involved_in ISO (PMID:17123352) BHF-UCL PMID:17123352 NCBI chrNW_004624742:20,405,342...20,928,792
Ensembl chrNW_004624742:20,407,410...20,928,766 		JBrowse link
G St6galnac6 ST6 N-acetylgalactosaminide alpha-2,6-sialyltransferase 6 involved_in ISO (PMID:17123352) BHF-UCL PMID:17123352 NCBI chrNW_004624760:7,666,798...7,678,926
Ensembl chrNW_004624760:7,667,189...7,677,662 		JBrowse link
glycosylceramide catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Gla galactosidase alpha acts_upstream_of_or_within ISO (PMID:10840053), (PMID:15629890)
(PMID:10841515), (PMID:11752062), (PMID:9122231) 		MGI PMID:9122231 PMID:10840053 PMID:10841515 PMID:11752062 PMID:15629890 NCBI chrNW_004624902:1,163,360...1,173,087
Ensembl chrNW_004624902:1,163,611...1,173,177 		JBrowse link
G Lct lactase involved_in ISO PMID:4752949 UniProt PMID:4752949 RGD:151356630 NCBI chrNW_004624732:35,125,995...35,177,055
Ensembl chrNW_004624732:35,125,287...35,175,062 		JBrowse link
G LOC101704669 cytosolic beta-glucosidase involved_in IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004624755:9,449,778...9,508,298 JBrowse link
glycosylceramide metabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G St6galnac3 ST6 N-acetylgalactosaminide alpha-2,6-sialyltransferase 3 involved_in ISO (PMID:17123352) BHF-UCL PMID:17123352 NCBI chrNW_004624742:20,405,342...20,928,792
Ensembl chrNW_004624742:20,407,410...20,928,766 		JBrowse link
G St6galnac6 ST6 N-acetylgalactosaminide alpha-2,6-sialyltransferase 6 involved_in ISO (PMID:17123352) BHF-UCL PMID:17123352 NCBI chrNW_004624760:7,666,798...7,678,926
Ensembl chrNW_004624760:7,667,189...7,677,662 		JBrowse link
GPI anchor biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Cwh43 cell wall biogenesis 43 C-terminal homolog involved_in IEA TreeGrafter
UniProt		 GO_REF:0000043 GO_REF:0000118 NCBI chrNW_004624761:17,908,703...18,014,539
Ensembl chrNW_004624761:17,945,350...18,014,246 		JBrowse link
G Dpm1 dolichyl-phosphate mannosyltransferase subunit 1, catalytic involved_in
acts_upstream_of_or_within 		IEA
ISO 		(PMID:9535917)
(PMID:9535917), (PMID:9724629) 		TreeGrafter
MGI
UniProt		 PMID:9535917 PMID:9724629 GO_REF:0000117 GO_REF:0000118 NCBI chrNW_004624790:4,798,433...4,819,192
Ensembl chrNW_004624790:4,798,426...4,819,630 		JBrowse link
G Dpm2 dolichyl-phosphate mannosyltransferase subunit 2, regulatory involved_in
acts_upstream_of_or_within 		IEA
ISO 		PMID:9724629 TreeGrafter
MGI		 PMID:9724629 GO_REF:0000118 RGD:69827 NCBI chrNW_004624760:7,638,497...7,640,810
Ensembl chrNW_004624760:7,638,437...7,640,810 		JBrowse link
G Dpm3 dolichyl-phosphate mannosyltransferase subunit 3, regulatory involved_in IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004624885:2,377,850...2,378,390
Ensembl chrNW_004624885:2,377,880...2,378,390 		JBrowse link
G Gpaa1 glycosylphosphatidylinositol anchor attachment 1 involved_in IEA UniProt GO_REF:0000043 NCBI chrNW_004624735:12,739,750...12,743,219
Ensembl chrNW_004624735:12,739,750...12,743,223 		JBrowse link
G LOC101699821 phosphatidylinositol N-acetylglucosaminyltransferase subunit Y-like involved_in IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004624868:4,066,403...4,068,757 JBrowse link
G LOC101702181 phosphatidylinositol N-acetylglucosaminyltransferase subunit Y-like involved_in IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004624842:3,963,762...3,965,617 JBrowse link
G LOC101705251 phosphatidylinositol N-acetylglucosaminyltransferase subunit Y-like involved_in IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004624820:1,847,837...1,848,052 JBrowse link
G LOC106008430 dolichol-phosphate mannosyltransferase subunit 1-like involved_in IEA TreeGrafter
UniProt		 GO_REF:0000117 GO_REF:0000118 NCBI chrNW_004624892:3,049,774...3,055,536 JBrowse link
G LOC106009142 phosphatidylinositol N-acetylglucosaminyltransferase subunit Y-like involved_in IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004624743:10,262,366...10,265,238 JBrowse link
G Mppe1 metallophosphoesterase 1 involved_in IEA InterPro
UniProt
Ensembl		 GO_REF:0000002 GO_REF:0000043 GO_REF:0000107 GO_REF:0000117 NCBI chrNW_004624770:19,504,774...19,526,710
Ensembl chrNW_004624770:19,505,326...19,526,750 		JBrowse link
G Pgap1 post-GPI attachment to proteins inositol deacylase 1 ISO RGD PMID:14734546 RGD:1303970 NCBI chrNW_004624889:3,174,626...3,256,555
Ensembl chrNW_004624889:3,174,739...3,244,315 		JBrowse link
G Pgap2 post-GPI attachment to proteins 2 involved_in IEA UniProt
TreeGrafter
Ensembl		 GO_REF:0000043 GO_REF:0000107 GO_REF:0000118 NCBI chrNW_004624817:5,245,707...5,269,056
Ensembl chrNW_004624817:5,245,713...5,269,056 		JBrowse link
G Pgap3 post-GPI attachment to proteins phospholipase 3 involved_in IEA InterPro
UniProt
TreeGrafter		 GO_REF:0000002 GO_REF:0000043 GO_REF:0000118 NCBI chrNW_004624795:3,399,648...3,408,277
Ensembl chrNW_004624795:3,399,699...3,408,277 		JBrowse link
G Pgap4 post-GPI attachment to proteins GalNAc transferase 4 involved_in IEA TreeGrafter
InterPro
Ensembl		 GO_REF:0000002 GO_REF:0000107 GO_REF:0000118 NCBI chrNW_004624758:9,819,541...9,832,529 JBrowse link
G Piga phosphatidylinositol glycan anchor biosynthesis class A involved_in
acts_upstream_of_or_within 		IEA UniProt
TreeGrafter
InterPro
Ensembl		 GO_REF:0000002 GO_REF:0000041 GO_REF:0000043 GO_REF:0000107 GO_REF:0000118 NCBI chrNW_004624829:128,161...143,378
Ensembl chrNW_004624829:128,586...142,150 		JBrowse link
G Pigb phosphatidylinositol glycan anchor biosynthesis class B involved_in IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004624731:6,286,406...6,306,070
Ensembl chrNW_004624731:6,283,848...6,305,855 		JBrowse link
G Pigc phosphatidylinositol glycan anchor biosynthesis class C involved_in IEA UniProt
Ensembl
InterPro		 GO_REF:0000002 GO_REF:0000041 GO_REF:0000043 GO_REF:0000107 NCBI chrNW_004624771:9,234,218...9,236,991
Ensembl chrNW_004624771:9,234,242...9,236,987 		JBrowse link
G Pigf phosphatidylinositol glycan anchor biosynthesis class F involved_in IEA UniProt
InterPro		 GO_REF:0000002 GO_REF:0000041 GO_REF:0000043 NCBI chrNW_004624738:28,031,839...28,069,409 JBrowse link
G Pigg phosphatidylinositol glycan anchor biosynthesis class G (EMM blood group) involved_in
acts_upstream_of_or_within 		IEA
ISO 		(PMID:15632136) InterPro
UniProt
TreeGrafter
MGI		 PMID:15632136 GO_REF:0000002 GO_REF:0000041 GO_REF:0000043 GO_REF:0000118 NCBI chrNW_004624755:26,505,042...26,538,392
Ensembl chrNW_004624755:26,505,042...26,538,382 		JBrowse link
G Pigh phosphatidylinositol glycan anchor biosynthesis class H involved_in IEA TreeGrafter
UniProt
InterPro		 GO_REF:0000002 GO_REF:0000041 GO_REF:0000118 NCBI chrNW_004624734:33,398,446...33,414,710
Ensembl chrNW_004624734:33,398,584...33,411,979 		JBrowse link
G Pigk phosphatidylinositol glycan anchor biosynthesis class K involved_in IEA UniProt GO_REF:0000041 GO_REF:0000043 NCBI chrNW_004624742:19,893,642...19,990,393
Ensembl chrNW_004624742:19,893,686...19,987,186 		JBrowse link
G Pigl phosphatidylinositol glycan anchor biosynthesis class L involved_in ISO
IEA 		RGD
UniProt		 PMID:9188481 GO_REF:0000041 GO_REF:0000043 GO_REF:0000117 RGD:729509 NCBI chrNW_004624877:4,078,752...4,202,024
Ensembl chrNW_004624877:4,117,075...4,202,616 		JBrowse link
G Pigm phosphatidylinositol glycan anchor biosynthesis class M involved_in IEA
ISO 		TreeGrafter
InterPro
UniProt
RGD		 PMID:11226175 GO_REF:0000002 GO_REF:0000041 GO_REF:0000043 GO_REF:0000118 RGD:70624 NCBI chrNW_004624794:1,220,004...1,222,259
Ensembl chrNW_004624794:1,220,121...1,221,392 		JBrowse link
G Pign phosphatidylinositol glycan anchor biosynthesis class N involved_in IEA UniProt
InterPro
TreeGrafter		 GO_REF:0000002 GO_REF:0000041 GO_REF:0000043 GO_REF:0000117 GO_REF:0000118 NCBI chrNW_004624792:7,713,042...7,916,177
Ensembl chrNW_004624792:7,712,113...7,916,160 		JBrowse link
G Pigo phosphatidylinositol glycan anchor biosynthesis class O involved_in IEA TreeGrafter
UniProt
InterPro		 GO_REF:0000002 GO_REF:0000041 GO_REF:0000043 GO_REF:0000117 GO_REF:0000118 NCBI chrNW_004624915:284,079...294,696
Ensembl chrNW_004624915:284,333...291,467 		JBrowse link
G Pigp phosphatidylinositol glycan anchor biosynthesis class P acts_upstream_of_or_within
involved_in 		ISO
IEA 		(PMID:10944123) MGI
InterPro
TreeGrafter
UniProt		 PMID:10944123 GO_REF:0000002 GO_REF:0000043 GO_REF:0000118 NCBI chrNW_004624745:26,566,046...26,576,635 JBrowse link
G Pigq phosphatidylinositol glycan anchor biosynthesis class Q involved_in
acts_upstream_of_or_within 		IEA InterPro
TreeGrafter
Ensembl		 GO_REF:0000002 GO_REF:0000107 GO_REF:0000118 NCBI chrNW_004624913:1,380,178...1,397,399
Ensembl chrNW_004624913:1,383,624...1,397,396 		JBrowse link
G Pigs phosphatidylinositol glycan anchor biosynthesis class S involved_in IEA UniProt GO_REF:0000041 GO_REF:0000043 NCBI chrNW_004624786:1,141,700...1,156,314
Ensembl chrNW_004624786:1,141,591...1,156,194 		JBrowse link
G Pigu phosphatidylinositol glycan anchor biosynthesis class U involved_in IEA UniProt GO_REF:0000041 GO_REF:0000043 NCBI chrNW_004624842:4,692,831...4,800,342
Ensembl chrNW_004624842:4,692,741...4,800,825 		JBrowse link
G Pigv phosphatidylinositol glycan anchor biosynthesis class V involved_in IEA UniProt
TreeGrafter
InterPro		 GO_REF:0000002 GO_REF:0000041 GO_REF:0000043 GO_REF:0000118 NCBI chrNW_004624764:10,765,842...10,813,938
Ensembl chrNW_004624764:10,767,552...10,780,738 		JBrowse link
G Pigw phosphatidylinositol glycan anchor biosynthesis class W involved_in IEA TreeGrafter
UniProt
InterPro		 GO_REF:0000002 GO_REF:0000041 GO_REF:0000043 GO_REF:0000118 NCBI chrNW_004624871:3,616,335...3,619,668
Ensembl chrNW_004624871:3,616,359...3,619,560 		JBrowse link
G Pigx phosphatidylinositol glycan anchor biosynthesis class X involved_in IEA InterPro
UniProt		 GO_REF:0000002 GO_REF:0000043 NCBI chrNW_004624730:61,789,769...61,812,875
Ensembl chrNW_004624730:61,789,911...61,813,502 		JBrowse link
G Pigy phosphatidylinositol glycan anchor biosynthesis class Y acts_upstream_of_or_within
involved_in 		ISO
IEA 		(PMID:16162815) MGI
TreeGrafter		 PMID:16162815 GO_REF:0000118 NCBI chrNW_004624757:16,159,263...16,159,777 JBrowse link
G Pigz phosphatidylinositol glycan anchor biosynthesis class Z (Gwada blood group) involved_in IEA TreeGrafter
UniProt		 GO_REF:0000043 GO_REF:0000118 NCBI chrNW_004624730:61,933,493...61,956,516
Ensembl chrNW_004624730:61,933,431...61,937,413 		JBrowse link
G Slc30a5 solute carrier family 30 member 5 acts_upstream_of_positive_effect ISO (PMID:35525268) UniProt PMID:35525268 NCBI chrNW_004624815:134,290...172,177
Ensembl chrNW_004624815:134,723...172,230 		JBrowse link
GPI anchor metabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Pgap1 post-GPI attachment to proteins inositol deacylase 1 involved_in IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004624889:3,174,626...3,256,555
Ensembl chrNW_004624889:3,174,739...3,244,315 		JBrowse link
G Pgap3 post-GPI attachment to proteins phospholipase 3 involved_in IEA UniProt GO_REF:0000104 NCBI chrNW_004624795:3,399,648...3,408,277
Ensembl chrNW_004624795:3,399,699...3,408,277 		JBrowse link
G Pigm phosphatidylinositol glycan anchor biosynthesis class M involved_in IEA UniProt GO_REF:0000104 NCBI chrNW_004624794:1,220,004...1,222,259
Ensembl chrNW_004624794:1,220,121...1,221,392 		JBrowse link
G Pigw phosphatidylinositol glycan anchor biosynthesis class W involved_in IEA UniProt GO_REF:0000117 NCBI chrNW_004624871:3,616,335...3,619,668
Ensembl chrNW_004624871:3,616,359...3,619,560 		JBrowse link
G Pigx phosphatidylinositol glycan anchor biosynthesis class X involved_in IEA UniProt GO_REF:0000104 NCBI chrNW_004624730:61,789,769...61,812,875
Ensembl chrNW_004624730:61,789,911...61,813,502 		JBrowse link
lactosylceramide biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G B4galt4 beta-1,4-galactosyltransferase 4 involved_in ISO (PMID:9792633) UniProt PMID:9792633 NCBI chrNW_004624731:28,929,599...28,972,417
Ensembl chrNW_004624731:28,939,838...28,971,652 		JBrowse link
G B4galt6 beta-1,4-galactosyltransferase 6 involved_in ISO (PMID:10320813) BHF-UCL PMID:10320813 NCBI chrNW_004624770:1,119,202...1,239,127
Ensembl chrNW_004624770:1,160,120...1,240,016 		JBrowse link
membrane lipid catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Blvrb biliverdin reductase B acts_upstream_of_or_within ISO (PMID:33359909) MGI PMID:33359909 NCBI chrNW_004624925:432,137...452,946
Ensembl chrNW_004624925:432,137...452,903 		JBrowse link
G LOC101701066 cytochrome P450 1B1 involved_in ISO (PMID:19005183), (PMID:23979599) UniProt PMID:19005183 PMID:23979599 NCBI chrNW_004624738:19,639,215...19,647,807
Ensembl chrNW_004624738:19,638,456...19,647,497 		JBrowse link
G Mgst2 microsomal glutathione S-transferase 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004624777:19,902,013...19,924,272
Ensembl chrNW_004624777:19,901,862...19,927,011 		JBrowse link
G Smpdl3b sphingomyelin phosphodiesterase acid like 3B involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004624764:11,785,739...11,807,351
Ensembl chrNW_004624764:11,785,640...11,807,084 		JBrowse link
G Zpbp2 zona pellucida binding protein 2 acts_upstream_of_or_within ISO (PMID:29536159) MGI PMID:29536159 NCBI chrNW_004624795:3,242,607...3,252,997 JBrowse link
negative regulation of ceramide biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ormdl2 ORMDL sphingolipid biosynthesis regulator 2 acts_upstream_of_or_within ISO (PMID:25691431) MGI PMID:25691431 NCBI chrNW_004624802:12,197,114...12,200,044
Ensembl chrNW_004624802:12,197,114...12,199,983 		JBrowse link
G Ormdl3 ORMDL sphingolipid biosynthesis regulator 3 acts_upstream_of_or_within ISO (PMID:25691431) MGI PMID:25691431 NCBI chrNW_004624795:3,210,382...3,216,130
Ensembl chrNW_004624795:3,209,605...3,217,539 		JBrowse link
G Sphk1 sphingosine kinase 1 involved_in ISO (PMID:16118219) UniProt PMID:16118219 NCBI chrNW_004624801:6,253,219...6,257,128 JBrowse link
negative regulation of sphingolipid biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Abca2 ATP binding cassette subfamily A member 2 involved_in ISO (PMID:24201375) ARUK-UCL PMID:24201375 RGD:14697729 NCBI chrNW_004624760:880,216...898,753
Ensembl chrNW_004624760:880,148...898,751 		JBrowse link
G Atg7 autophagy related 7 acts_upstream_of_or_within ISO (PMID:25332431) MGI PMID:25332431 NCBI chrNW_004624943:231,978...480,933
Ensembl chrNW_004624943:232,618...481,290 		JBrowse link
omega-hydroxyceramide biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Pnpla1 patatin like domain 1, omega-hydroxyceramide transacylase involved_in IEA UniProt GO_REF:0000117 NCBI chrNW_004624754:21,370,872...21,410,804
Ensembl chrNW_004624754:21,375,463...21,410,961 		JBrowse link
phytosphingosine biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Acer3 alkaline ceramidase 3 involved_in IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004624863:37,148...96,550
Ensembl chrNW_004624863:37,148...95,211 		JBrowse link
G LOC106007497 alkaline ceramidase 3-like involved_in IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004624817:70...116,261 JBrowse link
positive regulation of ceramide biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ccn1 cellular communication network factor 1 acts_upstream_of_or_within ISO (PMID:19364818) MGI PMID:19364818 NCBI chrNW_004624742:11,882,815...11,885,686
Ensembl chrNW_004624742:11,882,907...11,885,667 		JBrowse link
G Enpp7 ectonucleotide pyrophosphatase/phosphodiesterase 7 involved_in ISO (PMID:21177474) UniProt PMID:21177474 NCBI chrNW_004624801:8,895,138...8,901,848
Ensembl chrNW_004624801:8,895,836...8,903,952 		JBrowse link
G Pla2g6 phospholipase A2 group VI involved_in ISO
IEA 		RGD
TreeGrafter		 PMID:18936091 GO_REF:0000118 RGD:6482750 NCBI chrNW_004624752:9,792,778...9,841,817
Ensembl chrNW_004624752:9,792,807...9,843,457 		JBrowse link
G Prkcd protein kinase C delta involved_in ISO (PMID:19279011) BHF-UCL PMID:19279011 NCBI chrNW_004624822:4,035,819...4,062,907
Ensembl chrNW_004624822:4,033,130...4,059,555 		JBrowse link
G Sirt3 sirtuin 3 involved_in ISO (PMID:26620563) UniProt PMID:26620563 NCBI chrNW_004624766:22,199,741...22,233,933
Ensembl chrNW_004624766:22,199,601...22,233,933 		JBrowse link
G Smpd3 sphingomyelin phosphodiesterase 3 ISO RGD PMID:20096352 RGD:10041064 NCBI chrNW_004624746:17,857,779...17,948,469
Ensembl chrNW_004624746:17,920,835...17,948,468 		JBrowse link
G Sphk2 sphingosine kinase 2 involved_in ISO (PMID:16118219) UniProt PMID:16118219 NCBI chrNW_004624832:5,246,328...5,254,247
Ensembl chrNW_004624832:5,246,895...5,253,207 		JBrowse link
positive regulation of glucosylceramide catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Prkcd protein kinase C delta involved_in ISO (PMID:19279011) BHF-UCL PMID:19279011 NCBI chrNW_004624822:4,035,819...4,062,907
Ensembl chrNW_004624822:4,033,130...4,059,555 		JBrowse link
positive regulation of sphingomyelin catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Enpp7 ectonucleotide pyrophosphatase/phosphodiesterase 7 involved_in ISO (PMID:21177474) UniProt PMID:21177474 NCBI chrNW_004624801:8,895,138...8,901,848
Ensembl chrNW_004624801:8,895,836...8,903,952 		JBrowse link
G Prkcd protein kinase C delta involved_in ISO (PMID:19279011) BHF-UCL PMID:19279011 NCBI chrNW_004624822:4,035,819...4,062,907
Ensembl chrNW_004624822:4,033,130...4,059,555 		JBrowse link
regulation of ceramide biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G LOC101706228 ORM1-like protein 1 involved_in IEA UniProt GO_REF:0000104 GO_REF:0000117 NCBI chrNW_004624753:15,730,590...15,731,228 JBrowse link
G Ormdl2 ORMDL sphingolipid biosynthesis regulator 2 involved_in IEA UniProt GO_REF:0000104 GO_REF:0000117 NCBI chrNW_004624802:12,197,114...12,200,044
Ensembl chrNW_004624802:12,197,114...12,199,983 		JBrowse link
G Ormdl3 ORMDL sphingolipid biosynthesis regulator 3 involved_in IEA UniProt GO_REF:0000104 GO_REF:0000117 NCBI chrNW_004624795:3,210,382...3,216,130
Ensembl chrNW_004624795:3,209,605...3,217,539 		JBrowse link
G Paqr4 progestin and adipoQ receptor family member 4 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004624824:711,755...715,815
Ensembl chrNW_004624824:712,355...715,700 		JBrowse link
G Prkcd protein kinase C delta involved_in ISO (PMID:17303575) UniProt PMID:17303575 NCBI chrNW_004624822:4,035,819...4,062,907
Ensembl chrNW_004624822:4,033,130...4,059,555 		JBrowse link
G Samd8 sterile alpha motif domain containing 8 involved_in ISO (PMID:19506037) UniProt PMID:19506037 NCBI chrNW_004624754:8,466,049...8,553,721
Ensembl chrNW_004624754:8,465,981...8,550,666 		JBrowse link
sphinganine biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Sptlc1 serine palmitoyltransferase long chain base subunit 1 acts_upstream_of_or_within ISO (PMID:19416652) MGI PMID:19416652 NCBI chrNW_004624868:317,992...393,776
Ensembl chrNW_004624868:318,059...393,773 		JBrowse link
G Sptlc2 serine palmitoyltransferase long chain base subunit 2 acts_upstream_of_or_within ISO (PMID:9363775) MGI PMID:9363775 NCBI chrNW_004624734:24,281,482...24,400,870 JBrowse link
sphinganine metabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Degs2 delta 4-desaturase, sphingolipid 2 involved_in
acts_upstream_of_or_within 		IEA
ISO 		(PMID:11937514)
(PMID:16571104) 		TreeGrafter
MGI		 PMID:11937514 PMID:16571104 GO_REF:0000118 NCBI chrNW_004624734:3,913,159...3,925,309
Ensembl chrNW_004624734:3,913,169...3,926,156 		JBrowse link
sphinganine-1-phosphate biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Sphk2 sphingosine kinase 2 involved_in IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004624832:5,246,328...5,254,247
Ensembl chrNW_004624832:5,246,895...5,253,207 		JBrowse link
sphinganine-1-phosphate metabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Sgpp1 sphingosine-1-phosphate phosphatase 1 acts_upstream_of_or_within ISO (PMID:10859351), (PMID:11756451) MGI PMID:10859351 PMID:11756451 NCBI chrNW_004624734:37,297,954...37,337,830
Ensembl chrNW_004624734:37,297,806...37,335,553 		JBrowse link
sphingoid biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Sptlc3 serine palmitoyltransferase long chain base subunit 3 acts_upstream_of_or_within ISO (PMID:19648650) MGI PMID:19648650 NCBI chrNW_004624741:13,956,688...14,152,127
Ensembl chrNW_004624741:13,956,570...14,152,600 		JBrowse link
sphingolipid biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Acer1 alkaline ceramidase 1 involved_in ISO (PMID:17713573) BHF-UCL PMID:17713573 NCBI chrNW_004624828:4,022,288...4,046,235
Ensembl chrNW_004624828:4,041,875...4,045,675 		JBrowse link
G B3gnt5 UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltransferase 5 involved_in IEA UniProt GO_REF:0000117 NCBI chrNW_004624730:73,122,977...73,167,713
Ensembl chrNW_004624730:73,152,728...73,153,867 		JBrowse link
G Cerkl CERK like autophagy regulator acts_upstream_of_or_within ISO (PMID:23501591) MGI PMID:23501591 NCBI chrNW_004624844:3,354,823...3,474,036 JBrowse link
G Cers1 ceramide synthase 1 involved_in ISO (PMID:12105227) UniProt PMID:12105227 NCBI chrNW_004624908:1,937,007...1,949,780
Ensembl chrNW_004624908:1,941,393...1,949,760 		JBrowse link
G Cers2 ceramide synthase 2 acts_upstream_of_or_within ISO (PMID:15823095) MGI PMID:15823095 NCBI chrNW_004624772:18,851,681...18,855,267
Ensembl chrNW_004624772:18,851,612...18,855,255 		JBrowse link
G Cers3 ceramide synthase 3 acts_upstream_of_or_within ISO (PMID:16753040) MGI PMID:16753040 NCBI chrNW_004624768:4,150,680...4,287,741
Ensembl chrNW_004624768:4,151,925...4,288,195 		JBrowse link
G Cers4 ceramide synthase 4 acts_upstream_of_or_within ISO (PMID:15823095) MGI PMID:15823095 NCBI chrNW_004624828:1,074,920...1,092,607
Ensembl chrNW_004624828:1,074,942...1,092,647 		JBrowse link
G Cers5 ceramide synthase 5 acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chrNW_004624816:2,150,409...2,190,099
Ensembl chrNW_004624816:2,150,535...2,182,141 		JBrowse link
G Cers6 ceramide synthase 6 acts_upstream_of_or_within ISO (PMID:15823095) MGI PMID:15823095 NCBI chrNW_004624787:6,208,976...6,511,575
Ensembl chrNW_004624787:6,208,478...6,511,708 		JBrowse link
G Degs1 delta 4-desaturase, sphingolipid 1 involved_in IEA InterPro GO_REF:0000002 NCBI chrNW_004624835:5,880,855...5,889,295
Ensembl chrNW_004624835:5,880,301...5,889,294 		JBrowse link
G Degs2 delta 4-desaturase, sphingolipid 2 involved_in
acts_upstream_of_or_within 		IEA
ISO 		(PMID:11937514) InterPro
MGI		 PMID:11937514 GO_REF:0000002 NCBI chrNW_004624734:3,913,159...3,925,309
Ensembl chrNW_004624734:3,913,169...3,926,156 		JBrowse link
G Elovl1 ELOVL fatty acid elongase 1 involved_in IEA Ensembl
TreeGrafter		 GO_REF:0000107 GO_REF:0000118 NCBI chrNW_004624892:2,679,872...2,684,499
Ensembl chrNW_004624892:2,675,421...2,684,622 		JBrowse link
G Elovl2 ELOVL fatty acid elongase 2 involved_in IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004624756:14,934,048...14,995,801
Ensembl chrNW_004624756:14,978,195...14,992,938 		JBrowse link
G Elovl3 ELOVL fatty acid elongase 3 involved_in IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004624831:1,646,319...1,649,435
Ensembl chrNW_004624831:1,646,240...1,649,740 		JBrowse link
G Elovl4 ELOVL fatty acid elongase 4 involved_in IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004624819:6,572,263...6,601,991
Ensembl chrNW_004624819:6,572,161...6,602,072 		JBrowse link
G Elovl5 ELOVL fatty acid elongase 5 involved_in IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004624850:523,059...598,135
Ensembl chrNW_004624850:522,018...597,469 		JBrowse link
G Elovl6 ELOVL fatty acid elongase 6 involved_in IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004624838:4,469,321...4,593,919
Ensembl chrNW_004624838:4,468,192...4,593,556 		JBrowse link
G Elovl7 ELOVL fatty acid elongase 7 involved_in IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004624815:9,154,070...9,247,251
Ensembl chrNW_004624815:9,190,454...9,247,746 		JBrowse link
G Hacd1 3-hydroxyacyl-CoA dehydratase 1 involved_in IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004624796:10,295,957...10,315,222
Ensembl chrNW_004624796:10,295,993...10,313,108 		JBrowse link
G Hacd2 3-hydroxyacyl-CoA dehydratase 2 involved_in IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004624912:1,814,906...1,916,584
Ensembl chrNW_004624912:1,814,906...1,917,009 		JBrowse link
G Hacd3 3-hydroxyacyl-CoA dehydratase 3 involved_in IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004624781:7,007,155...7,043,165
Ensembl chrNW_004624781:7,007,155...7,043,244 		JBrowse link
G Hacd4 3-hydroxyacyl-CoA dehydratase 4 involved_in IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004624736:25,005,040...25,028,163
Ensembl chrNW_004624736:25,005,329...25,025,611 		JBrowse link
G Kdsr 3-ketodihydrosphingosine reductase involved_in
acts_upstream_of_or_within 		IEA
ISO 		(PMID:15328338) TreeGrafter
MGI
UniProt
InterPro		 PMID:15328338 GO_REF:0000002 GO_REF:0000117 GO_REF:0000118 NCBI chrNW_004624792:9,038,076...9,081,650
Ensembl chrNW_004624792:9,040,999...9,082,154 		JBrowse link
G Sptlc1 serine palmitoyltransferase long chain base subunit 1 acts_upstream_of_or_within ISO (PMID:25332431) MGI PMID:25332431 NCBI chrNW_004624868:317,992...393,776
Ensembl chrNW_004624868:318,059...393,773 		JBrowse link
G Sptlc2 serine palmitoyltransferase long chain base subunit 2 involved_in
acts_upstream_of_or_within 		ISO (PMID:26573920)
(PMID:28698261)
(PMID:25332431) 		UniProt
MGI		 PMID:25332431 PMID:26573920 PMID:28698261 NCBI chrNW_004624734:24,281,482...24,400,870 JBrowse link
G Sptssb serine palmitoyltransferase small subunit B acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chrNW_004624730:39,280,846...39,324,174
Ensembl chrNW_004624730:39,291,652...39,323,139 		JBrowse link
sphingolipid catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Enpp2 ectonucleotide pyrophosphatase/phosphodiesterase 2 involved_in ISO (PMID:14500380) UniProt PMID:14500380 NCBI chrNW_004624763:17,677,825...17,775,284
Ensembl chrNW_004624763:17,677,722...17,765,292 		JBrowse link
G LOC101700996 sphingosine-1-phosphate lyase 1-like involved_in IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004624837:7,032,214...7,035,705 JBrowse link
G Sgpl1 sphingosine-1-phosphate lyase 1 involved_in IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004624754:4,844,472...4,889,006
Ensembl chrNW_004624754:4,844,552...4,886,709 		JBrowse link
G Vps54 VPS54 subunit of GARP complex involved_in ISO (PMID:32345721) MGI PMID:32345721 NCBI chrNW_004624762:9,457,283...9,570,311
Ensembl chrNW_004624762:9,457,705...9,563,779 		JBrowse link
sphingolipid metabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Acer1 alkaline ceramidase 1 involved_in
acts_upstream_of_or_within 		IEA
ISO 		(PMID:12783875) UniProt
MGI		 PMID:12783875 GO_REF:0000041 GO_REF:0000043 NCBI chrNW_004624828:4,022,288...4,046,235
Ensembl chrNW_004624828:4,041,875...4,045,675 		JBrowse link
G Acer2 alkaline ceramidase 2 involved_in IEA UniProt GO_REF:0000041 GO_REF:0000043 NCBI chrNW_004624736:23,363,806...23,556,247
Ensembl chrNW_004624736:23,363,983...23,411,100 		JBrowse link
G Acer3 alkaline ceramidase 3 involved_in IEA UniProt GO_REF:0000041 GO_REF:0000043 NCBI chrNW_004624863:37,148...96,550
Ensembl chrNW_004624863:37,148...95,211 		JBrowse link
G Agk acylglycerol kinase involved_in IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004624765:21,572,797...21,666,424
Ensembl chrNW_004624765:21,572,714...21,668,516 		JBrowse link
G Alox12b arachidonate 12-lipoxygenase, 12R type involved_in ISO (PMID:21558561) UniProt PMID:21558561 NCBI chrNW_004624786:10,647,450...10,659,301
Ensembl chrNW_004624786:10,647,175...10,659,337 		JBrowse link
G Aloxe3 arachidonate epidermal lipoxygenase 3 involved_in ISO (PMID:21558561) UniProt PMID:21558561 NCBI chrNW_004624786:10,666,255...10,689,204
Ensembl chrNW_004624786:10,666,423...10,688,376 		JBrowse link
G Arv1 ARV1 fatty acid homeostasis modulator involved_in IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004624775:18,634,671...18,652,476
Ensembl chrNW_004624775:18,638,010...18,652,985 		JBrowse link
G Asah1 N-acylsphingosine amidohydrolase 1 involved_in IEA UniProt GO_REF:0000041 GO_REF:0000043 NCBI chrNW_004624769:21,112,705...21,140,004
Ensembl chrNW_004624769:21,112,851...21,138,831 		JBrowse link
G Asah2 N-acylsphingosine amidohydrolase 2 involved_in IEA UniProt GO_REF:0000043 NCBI chrNW_004624791:12,906,908...13,059,033
Ensembl chrNW_004624791:12,907,485...13,059,005 		JBrowse link
G B4galt5 beta-1,4-galactosyltransferase 5 involved_in IEA UniProt GO_REF:0000043 NCBI chrNW_004624790:5,770,586...5,792,036
Ensembl chrNW_004624790:5,766,903...5,789,140 		JBrowse link
G B4galt6 beta-1,4-galactosyltransferase 6 involved_in IEA UniProt GO_REF:0000043 NCBI chrNW_004624770:1,119,202...1,239,127
Ensembl chrNW_004624770:1,160,120...1,240,016 		JBrowse link
G Cerk ceramide kinase involved_in IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004624752:3,285,649...3,328,131
Ensembl chrNW_004624752:3,285,637...3,326,738 		JBrowse link
G Cerkl CERK like autophagy regulator involved_in IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004624844:3,354,823...3,474,036 JBrowse link
G Cers1 ceramide synthase 1 involved_in IEA UniProt GO_REF:0000041 NCBI chrNW_004624908:1,937,007...1,949,780
Ensembl chrNW_004624908:1,941,393...1,949,760 		JBrowse link
G Cers2 ceramide synthase 2 involved_in IEA UniProt GO_REF:0000041 NCBI chrNW_004624772:18,851,681...18,855,267
Ensembl chrNW_004624772:18,851,612...18,855,255 		JBrowse link
G Cers3 ceramide synthase 3 involved_in IEA UniProt GO_REF:0000041 NCBI chrNW_004624768:4,150,680...4,287,741
Ensembl chrNW_004624768:4,151,925...4,288,195 		JBrowse link
G Cers4 ceramide synthase 4 involved_in IEA UniProt GO_REF:0000041 NCBI chrNW_004624828:1,074,920...1,092,607
Ensembl chrNW_004624828:1,074,942...1,092,647 		JBrowse link
G Cers5 ceramide synthase 5 involved_in IEA UniProt GO_REF:0000041 NCBI chrNW_004624816:2,150,409...2,190,099
Ensembl chrNW_004624816:2,150,535...2,182,141 		JBrowse link
G Cers6 ceramide synthase 6 involved_in IEA UniProt GO_REF:0000041 NCBI chrNW_004624787:6,208,976...6,511,575
Ensembl chrNW_004624787:6,208,478...6,511,708 		JBrowse link
G Fa2h fatty acid 2-hydroxylase involved_in IEA UniProt GO_REF:0000043 NCBI chrNW_004624746:12,125,709...12,186,254
Ensembl chrNW_004624746:12,125,506...12,186,671 		JBrowse link
G Gal3st1 galactose-3-O-sulfotransferase 1 involved_in ISO (PMID:8830034) UniProt PMID:8830034 NCBI chrNW_004625705:1,409...4,810
Ensembl chrNW_004625705:2,469...4,916 		JBrowse link
G Galc galactosylceramidase involved_in IEA UniProt GO_REF:0000043 NCBI chrNW_004624734:14,355,349...14,462,869
Ensembl chrNW_004624734:14,355,435...14,407,087 		JBrowse link
G Gba1 glucosylceramidase beta 1 involved_in IEA UniProt
InterPro		 GO_REF:0000002 GO_REF:0000043 NCBI chrNW_004624885:2,315,371...2,321,327
Ensembl chrNW_004624885:2,315,142...2,321,327 		JBrowse link
G Gba2 glucosylceramidase beta 2 involved_in IEA UniProt GO_REF:0000043 NCBI chrNW_004624868:5,045,566...5,056,419
Ensembl chrNW_004624868:5,045,594...5,056,416 		JBrowse link
G Kdsr 3-ketodihydrosphingosine reductase involved_in IEA UniProt GO_REF:0000043 NCBI chrNW_004624792:9,038,076...9,081,650
Ensembl chrNW_004624792:9,040,999...9,082,154 		JBrowse link
G LOC101706228 ORM1-like protein 1 involved_in IEA UniProt GO_REF:0000117 NCBI chrNW_004624753:15,730,590...15,731,228 JBrowse link
G LOC106007497 alkaline ceramidase 3-like involved_in IEA UniProt GO_REF:0000043 NCBI chrNW_004624817:70...116,261 JBrowse link
G Ormdl2 ORMDL sphingolipid biosynthesis regulator 2 involved_in IEA UniProt GO_REF:0000117 NCBI chrNW_004624802:12,197,114...12,200,044
Ensembl chrNW_004624802:12,197,114...12,199,983 		JBrowse link
G Ormdl3 ORMDL sphingolipid biosynthesis regulator 3 involved_in IEA UniProt GO_REF:0000117 NCBI chrNW_004624795:3,210,382...3,216,130
Ensembl chrNW_004624795:3,209,605...3,217,539 		JBrowse link
G Psap prosaposin involved_in
acts_upstream_of_or_within 		IEA
ISO 		(PMID:11371512) InterPro
MGI
UniProt		 PMID:11371512 GO_REF:0000002 GO_REF:0000104 NCBI chrNW_004624754:5,725,697...5,753,575
Ensembl chrNW_004624754:5,726,681...5,753,575 		JBrowse link
G Psapl1 prosaposin like 1 involved_in IEA InterPro GO_REF:0000002 NCBI chrNW_004624755:23,501,928...23,504,798 JBrowse link
G Samd8 sterile alpha motif domain containing 8 involved_in IEA UniProt GO_REF:0000043 NCBI chrNW_004624754:8,466,049...8,553,721
Ensembl chrNW_004624754:8,465,981...8,550,666 		JBrowse link
G Serinc1 serine incorporator 1 involved_in ISO PMID:16120614 HGNC-UCL PMID:16120614 RGD:8553290 NCBI chrNW_004624798:8,618,750...8,641,291
Ensembl chrNW_004624798:8,618,671...8,644,780 		JBrowse link
G Sftpb surfactant protein B involved_in IEA InterPro GO_REF:0000002 NCBI chrNW_004624749:17,486,483...17,495,822
Ensembl chrNW_004624749:17,486,518...17,493,846 		JBrowse link
G Sgms1 sphingomyelin synthase 1 involved_in IEA UniProt GO_REF:0000043 NCBI chrNW_004624791:13,096,268...13,490,220
Ensembl chrNW_004624791:13,097,808...13,146,544 		JBrowse link
G Sgms2 sphingomyelin synthase 2 involved_in IEA UniProt GO_REF:0000043 NCBI chrNW_004624830:1,498,700...1,543,112
Ensembl chrNW_004624830:1,502,336...1,542,134 		JBrowse link
G Sgpl1 sphingosine-1-phosphate lyase 1 involved_in IEA UniProt GO_REF:0000043 NCBI chrNW_004624754:4,844,472...4,889,006
Ensembl chrNW_004624754:4,844,552...4,886,709 		JBrowse link
G Sgpp1 sphingosine-1-phosphate phosphatase 1 acts_upstream_of_or_within ISO (PMID:10859351), (PMID:12235122) MGI PMID:10859351 PMID:12235122 NCBI chrNW_004624734:37,297,954...37,337,830
Ensembl chrNW_004624734:37,297,806...37,335,553 		JBrowse link
G Smpd2 sphingomyelin phosphodiesterase 2 involved_in IEA UniProt GO_REF:0000043 NCBI chrNW_004624916:697,861...701,015
Ensembl chrNW_004624916:697,006...701,012 		JBrowse link
G Smpd3 sphingomyelin phosphodiesterase 3 involved_in
acts_upstream_of_or_within 		IEA
ISO 		(PMID:22945695) UniProt
MGI		 PMID:22945695 GO_REF:0000041 GO_REF:0000043 NCBI chrNW_004624746:17,857,779...17,948,469
Ensembl chrNW_004624746:17,920,835...17,948,468 		JBrowse link
G Sphk1 sphingosine kinase 1 involved_in IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004624801:6,253,219...6,257,128 JBrowse link
G Sphk2 sphingosine kinase 2 involved_in IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004624832:5,246,328...5,254,247
Ensembl chrNW_004624832:5,246,895...5,253,207 		JBrowse link
G Spns2 SPNS lysolipid transporter 2, sphingosine-1-phosphate acts_upstream_of_or_within ISO (PMID:23180825) MGI PMID:23180825 NCBI chrNW_004624786:7,065,992...7,103,944
Ensembl chrNW_004624786:7,066,142...7,102,501 		JBrowse link
G Sptlc1 serine palmitoyltransferase long chain base subunit 1 involved_in IEA UniProt GO_REF:0000043 NCBI chrNW_004624868:317,992...393,776
Ensembl chrNW_004624868:318,059...393,773 		JBrowse link
G Sptlc2 serine palmitoyltransferase long chain base subunit 2 involved_in IEA UniProt GO_REF:0000043 NCBI chrNW_004624734:24,281,482...24,400,870 JBrowse link
G Sptlc3 serine palmitoyltransferase long chain base subunit 3 involved_in IEA UniProt GO_REF:0000043 NCBI chrNW_004624741:13,956,688...14,152,127
Ensembl chrNW_004624741:13,956,570...14,152,600 		JBrowse link
G Sptssa serine palmitoyltransferase small subunit A involved_in IEA UniProt GO_REF:0000041 GO_REF:0000043 NCBI chrNW_004624838:2,207,003...2,231,838
Ensembl chrNW_004624838:2,206,917...2,231,518 		JBrowse link
G Sptssb serine palmitoyltransferase small subunit B involved_in IEA UniProt GO_REF:0000041 GO_REF:0000043 NCBI chrNW_004624730:39,280,846...39,324,174
Ensembl chrNW_004624730:39,291,652...39,323,139 		JBrowse link
G St8sia1 ST8 alpha-N-acetyl-neuraminide alpha-2,8-sialyltransferase 1 involved_in IEA UniProt GO_REF:0000043 NCBI chrNW_004624752:16,483,168...16,633,938
Ensembl chrNW_004624752:16,483,378...16,633,776 		JBrowse link
G Tecr trans-2,3-enoyl-CoA reductase involved_in IEA UniProt GO_REF:0000043 NCBI chrNW_004624901:1,643,465...1,668,544
Ensembl chrNW_004624901:1,643,520...1,668,550 		JBrowse link
G Th tyrosine hydroxylase ISO sphingosine 1-phosphate RGD PMID:21076868 RGD:5128811 NCBI chrNW_004624767:15,003,073...15,010,207
Ensembl chrNW_004624767:15,003,092...15,010,154 		JBrowse link
G Ugcg UDP-glucose ceramide glucosyltransferase involved_in IEA UniProt GO_REF:0000041 GO_REF:0000043 NCBI chrNW_004624760:23,059,141...23,094,013
Ensembl chrNW_004624760:23,056,929...23,094,010 		JBrowse link
G Ugt8 UDP glycosyltransferase 8 involved_in IEA UniProt GO_REF:0000043 NCBI chrNW_004624867:1,182,674...1,255,714
Ensembl chrNW_004624867:1,182,589...1,255,796 		JBrowse link
G Zpbp2 zona pellucida binding protein 2 acts_upstream_of_or_within ISO (PMID:29536159) MGI PMID:29536159 NCBI chrNW_004624795:3,242,607...3,252,997 JBrowse link
sphingomyelin biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Cert1 ceramide transporter 1 involved_in ISO (PMID:39106189) UOS_MCB PMID:39106189 NCBI chrNW_004624951:718,380...828,220
Ensembl chrNW_004624951:721,411...828,150 		JBrowse link
G Osbp oxysterol binding protein involved_in ISO (PMID:12023275) ComplexPortal PMID:12023275 NCBI chrNW_004624864:1,176,619...1,199,905
Ensembl chrNW_004624864:1,176,173...1,198,217 		JBrowse link
G Pemt phosphatidylethanolamine N-methyltransferase acts_upstream_of_or_within ISO (PMID:25667419) MGI PMID:25667419 NCBI chrNW_004624849:3,818,115...3,907,250
Ensembl chrNW_004624849:3,817,915...3,908,888 		JBrowse link
G Sgms1 sphingomyelin synthase 1 involved_in IEA Ensembl
TreeGrafter		 GO_REF:0000107 GO_REF:0000118 NCBI chrNW_004624791:13,096,268...13,490,220
Ensembl chrNW_004624791:13,097,808...13,146,544 		JBrowse link
G Sgms2 sphingomyelin synthase 2 involved_in
acts_upstream_of_or_within 		IEA
ISO 		(PMID:25667419) TreeGrafter
MGI		 PMID:25667419 GO_REF:0000118 NCBI chrNW_004624830:1,498,700...1,543,112
Ensembl chrNW_004624830:1,502,336...1,542,134 		JBrowse link
G Sptlc1 serine palmitoyltransferase long chain base subunit 1 acts_upstream_of_or_within
involved_in 		ISO
IEA 		(PMID:16216550) MGI
UniProt		 PMID:16216550 GO_REF:0000117 NCBI chrNW_004624868:317,992...393,776
Ensembl chrNW_004624868:318,059...393,773 		JBrowse link
G Sptlc2 serine palmitoyltransferase long chain base subunit 2 acts_upstream_of_or_within ISO (PMID:16216550) MGI PMID:16216550 NCBI chrNW_004624734:24,281,482...24,400,870 JBrowse link
G Vapa VAMP associated protein A involved_in ISO (PMID:12023275) ComplexPortal PMID:12023275 NCBI chrNW_004624770:18,411,921...18,447,004
Ensembl chrNW_004624770:18,411,789...18,447,009 		JBrowse link
sphingomyelin catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Smpd1 sphingomyelin phosphodiesterase 1 involved_in
acts_upstream_of_or_within 		IEA TreeGrafter
UniProt
InterPro
Ensembl		 GO_REF:0000002 GO_REF:0000104 GO_REF:0000107 GO_REF:0000117 GO_REF:0000118 NCBI chrNW_004624817:7,909,777...7,913,419
Ensembl chrNW_004624817:7,909,468...7,913,417 		JBrowse link
G Smpd2 sphingomyelin phosphodiesterase 2 involved_in
acts_upstream_of_or_within 		ISO (PMID:10608884), (PMID:14741383)
(PMID:23973266)
(PMID:9520418) 		UniProt
MGI		 PMID:9520418 PMID:10608884 PMID:14741383 PMID:23973266 NCBI chrNW_004624916:697,861...701,015
Ensembl chrNW_004624916:697,006...701,012 		JBrowse link
G Smpd3 sphingomyelin phosphodiesterase 3 involved_in
acts_upstream_of_or_within 		ISO (PMID:14741383)
(PMID:23973266) 		UniProt
MGI		 PMID:14741383 PMID:23973266 NCBI chrNW_004624746:17,857,779...17,948,469
Ensembl chrNW_004624746:17,920,835...17,948,468 		JBrowse link
G Smpd4 sphingomyelin phosphodiesterase 4 involved_in IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004624945:566,203...592,254 JBrowse link
G Smpdl3a sphingomyelin phosphodiesterase acid like 3A NOT|involved_in ISO
IEA 		(PMID:26783088) UniProt
InterPro		 PMID:26783088 GO_REF:0000002 NCBI chrNW_004624798:8,410,048...8,422,900
Ensembl chrNW_004624798:8,409,960...8,418,575 		JBrowse link
G Smpdl3b sphingomyelin phosphodiesterase acid like 3B involved_in IEA InterPro GO_REF:0000002 NCBI chrNW_004624764:11,785,739...11,807,351
Ensembl chrNW_004624764:11,785,640...11,807,084 		JBrowse link
sphingomyelin metabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Abca2 ATP binding cassette subfamily A member 2 involved_in ISO (PMID:17488728) UniProt PMID:17488728 NCBI chrNW_004624760:880,216...898,753
Ensembl chrNW_004624760:880,148...898,751 		JBrowse link
G Enpp7 ectonucleotide pyrophosphatase/phosphodiesterase 7 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004624801:8,895,138...8,901,848
Ensembl chrNW_004624801:8,895,836...8,903,952 		JBrowse link
G Smpd3 sphingomyelin phosphodiesterase 3 acts_upstream_of_or_within
involved_in 		ISO
IEA 		(PMID:10823942) MGI
TreeGrafter		 PMID:10823942 GO_REF:0000118 NCBI chrNW_004624746:17,857,779...17,948,469
Ensembl chrNW_004624746:17,920,835...17,948,468 		JBrowse link
sphingosine biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Abca2 ATP binding cassette subfamily A member 2 acts_upstream_of_positive_effect ISO (PMID:26510981) ARUK-UCL PMID:26510981 NCBI chrNW_004624760:880,216...898,753
Ensembl chrNW_004624760:880,148...898,751 		JBrowse link
G Acer1 alkaline ceramidase 1 involved_in IEA TreeGrafter
UniProt		 GO_REF:0000117 GO_REF:0000118 NCBI chrNW_004624828:4,022,288...4,046,235
Ensembl chrNW_004624828:4,041,875...4,045,675 		JBrowse link
G Acer2 alkaline ceramidase 2 involved_in IEA UniProt
TreeGrafter		 GO_REF:0000117 GO_REF:0000118 NCBI chrNW_004624736:23,363,806...23,556,247
Ensembl chrNW_004624736:23,363,983...23,411,100 		JBrowse link
G Acer3 alkaline ceramidase 3 involved_in IEA UniProt GO_REF:0000117 NCBI chrNW_004624863:37,148...96,550
Ensembl chrNW_004624863:37,148...95,211 		JBrowse link
G Agk acylglycerol kinase involved_in IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004624765:21,572,797...21,666,424
Ensembl chrNW_004624765:21,572,714...21,668,516 		JBrowse link
G Asah1 N-acylsphingosine amidohydrolase 1 involved_in ISO (PMID:12815059)
(PMID:9653654)
(PMID:10610716) 		UniProt PMID:9653654 PMID:10610716 PMID:12815059 NCBI chrNW_004624769:21,112,705...21,140,004
Ensembl chrNW_004624769:21,112,851...21,138,831 		JBrowse link
G Asah2 N-acylsphingosine amidohydrolase 2 involved_in IEA TreeGrafter
UniProt		 GO_REF:0000117 GO_REF:0000118 NCBI chrNW_004624791:12,906,908...13,059,033
Ensembl chrNW_004624791:12,907,485...13,059,005 		JBrowse link
G Gba1 glucosylceramidase beta 1 involved_in ISO (PMID:19279011) BHF-UCL PMID:19279011 NCBI chrNW_004624885:2,315,371...2,321,327
Ensembl chrNW_004624885:2,315,142...2,321,327 		JBrowse link
G LOC106007497 alkaline ceramidase 3-like involved_in IEA UniProt GO_REF:0000117 NCBI chrNW_004624817:70...116,261 JBrowse link
G Sphk1 sphingosine kinase 1 involved_in IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004624801:6,253,219...6,257,128 JBrowse link
G Sphk2 sphingosine kinase 2 involved_in IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004624832:5,246,328...5,254,247
Ensembl chrNW_004624832:5,246,895...5,253,207 		JBrowse link
G Sptlc1 serine palmitoyltransferase long chain base subunit 1 acts_upstream_of_or_within
involved_in 		ISO
IEA 		(PMID:16216550) MGI
TreeGrafter		 PMID:16216550 GO_REF:0000118 NCBI chrNW_004624868:317,992...393,776
Ensembl chrNW_004624868:318,059...393,773 		JBrowse link
G Sptlc2 serine palmitoyltransferase long chain base subunit 2 involved_in
acts_upstream_of_or_within 		IEA
ISO 		(PMID:16216550) TreeGrafter
MGI		 PMID:16216550 GO_REF:0000118 NCBI chrNW_004624734:24,281,482...24,400,870 JBrowse link
G Sptlc3 serine palmitoyltransferase long chain base subunit 3 involved_in IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004624741:13,956,688...14,152,127
Ensembl chrNW_004624741:13,956,570...14,152,600 		JBrowse link
G Sptssa serine palmitoyltransferase small subunit A involved_in ISO (PMID:19416851), (PMID:33558761) ComplexPortal PMID:19416851 PMID:33558761 NCBI chrNW_004624838:2,207,003...2,231,838
Ensembl chrNW_004624838:2,206,917...2,231,518 		JBrowse link
G Sptssb serine palmitoyltransferase small subunit B involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004624730:39,280,846...39,324,174
Ensembl chrNW_004624730:39,291,652...39,323,139 		JBrowse link
sphingosine metabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Asah2 N-acylsphingosine amidohydrolase 2 involved_in ISO (PMID:16229686), (PMID:17475390), (PMID:26190575)
(PMID:10781606), (PMID:15946935) 		UniProt PMID:10781606 PMID:15946935 PMID:16229686 PMID:17475390 PMID:26190575 NCBI chrNW_004624791:12,906,908...13,059,033
Ensembl chrNW_004624791:12,907,485...13,059,005 		JBrowse link
G LOC101698443 sphingosine-1-phosphate phosphatase 1-like involved_in IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004624749:1,949,373...1,951,197 JBrowse link
G Naaa N-acylethanolamine acid amidase involved_in ISO (PMID:15655246) UniProt PMID:15655246 NCBI chrNW_004624757:15,074,137...15,101,342
Ensembl chrNW_004624757:15,074,189...15,099,876 		JBrowse link
G Plpp1 phospholipid phosphatase 1 involved_in ISO PMID:8663293
(PMID:10359651)
(PMID:9705349) 		UniProt PMID:8663293 PMID:9705349 PMID:10359651 RGD:15090855 RGD:15090857 NCBI chrNW_004624759:3,780,904...3,868,867
Ensembl chrNW_004624759:3,780,826...3,868,869 		JBrowse link
G Plpp2 phospholipid phosphatase 2 involved_in ISO (PMID:9705349) UniProt PMID:9705349 NCBI chrNW_004624828:8,058,688...8,062,679
Ensembl chrNW_004624828:8,058,329...8,062,677 		JBrowse link
G Plpp3 phospholipid phosphatase 3 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004624862:3,550,498...3,627,061
Ensembl chrNW_004624862:3,550,968...3,627,058 		JBrowse link
G Sgpp1 sphingosine-1-phosphate phosphatase 1 acts_upstream_of_or_within
involved_in 		ISO
IEA 		(PMID:11756451) MGI
TreeGrafter		 PMID:11756451 GO_REF:0000118 NCBI chrNW_004624734:37,297,954...37,337,830
Ensembl chrNW_004624734:37,297,806...37,335,553 		JBrowse link
G Sgpp2 sphingosine-1-phosphate phosphatase 2 involved_in IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004624823:2,635,128...2,756,566
Ensembl chrNW_004624823:2,638,257...2,756,448 		JBrowse link
G Sphk1 sphingosine kinase 1 involved_in ISO (PMID:20577214) UniProt PMID:20577214 NCBI chrNW_004624801:6,253,219...6,257,128 JBrowse link
G Sphk2 sphingosine kinase 2 acts_upstream_of_or_within
involved_in 		ISO (PMID:16093248)
(PMID:17346996) 		MGI
UniProt		 PMID:16093248 PMID:17346996 NCBI chrNW_004624832:5,246,328...5,254,247
Ensembl chrNW_004624832:5,246,895...5,253,207 		JBrowse link
Term paths to the root
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Term Annotations click to browse term
  biological_process 17808
    cellular process 17314
      metabolic process 11091
        primary metabolic process 9922
          lipid metabolic process 1325
            membrane lipid metabolic process 203
              glycolipid metabolic process + 107
              membrane lipid biosynthetic process + 142
              membrane lipid catabolic process + 39
              regulation of membrane lipid metabolic process + 15
              sphingolipid metabolic process + 149
paths to the root