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ONTOLOGY REPORT - ANNOTATIONS

Term:biogenic amine metabolic process
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Accession:GO:0006576 term browser browse the term
Definition:The chemical reactions and pathways occurring at the level of individual cells involving any of a group of naturally occurring, biologically active amines, such as norepinephrine, histamine, and serotonin, many of which act as neurotransmitters.
Synonyms:exact_synonym: biogenic amine metabolism;   cellular biogenic amine metabolic process


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biogenic amine metabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Mecp2 methyl CpG binding protein 2 acts_upstream_of_or_within ISO
IEA		 MGI:2137311 (PMID:15975715)
GO_REF:0000107		 RGD
Ensembl		 PMID:15975715 GO_REF:0000107 NCBI chr  X:156,932,481...156,995,981
Ensembl chr  X:151,789,930...151,844,689 		JBrowse link
'de novo' NAD biosynthetic process from L-tryptophan term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Afmid arylformamidase involved_in IEA GO_REF:0000104 UniProt GO_REF:0000104 NCBI chr10:103,046,129...103,061,718
Ensembl chr10:103,046,180...103,061,718 		JBrowse link
G Haao 3-hydroxyanthranilate 3,4-dioxygenase involved_in IEA
IBA		 GO_REF:0000104
GO_REF:0000033		 UniProt
GO_Central		 GO_REF:0000033 GO_REF:0000104 NCBI chr 6:10,845,235...10,864,863
Ensembl chr 6:10,845,771...10,864,877 		JBrowse link
G Ido1 indoleamine 2,3-dioxygenase 1 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr16:74,133,259...74,145,328
Ensembl chr16:67,430,578...67,442,730 		JBrowse link
G Ido2 indoleamine 2,3-dioxygenase 2 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr16:67,459,158...67,498,052
Ensembl chr16:67,459,190...67,496,324 		JBrowse link
G Kmo kynurenine 3-monooxygenase involved_in IEA GO_REF:0000104 UniProt GO_REF:0000104 NCBI chr13:87,557,080...87,589,334
Ensembl chr13:87,557,286...87,588,881 		JBrowse link
G Kynu kynureninase involved_in IEA GO_REF:0000104 UniProt GO_REF:0000104 NCBI chr 3:27,778,646...27,929,470
Ensembl chr 3:27,778,772...27,929,488 		JBrowse link
G Nadsyn1 NAD synthetase 1 involved_in ISS
ISO		 GO_REF:0000024
(PMID:31883644)		 UniProt
RGD		 PMID:31883644 GO_REF:0000024 NCBI chr 1:208,410,914...208,439,242
Ensembl chr 1:198,981,604...199,009,869 		JBrowse link
catecholamine biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Crhr2 corticotropin releasing hormone receptor 2 IMP RGD PMID:17194738 RGD:5131263 NCBI chr 4:84,222,897...84,265,924
Ensembl chr 4:84,224,002...84,265,904 		JBrowse link
G Dbh dopamine beta-hydroxylase involved_in IEA GO_REF:0000043 UniProt GO_REF:0000043 NCBI chr 3:30,886,313...30,903,313
Ensembl chr 3:10,488,260...10,505,248 		JBrowse link
G Ddc dopa decarboxylase involved_in TAS
IEA		 GO_REF:0000043 UniProt
RGD		 PMID:12047348 GO_REF:0000043, RGD:727571 NCBI chr14:86,378,685...86,469,189
Ensembl chr14:86,378,685...86,469,208 		JBrowse link
G Hdc histidine decarboxylase involved_in IEA GO_REF:0000043 UniProt GO_REF:0000043 NCBI chr 3:113,847,256...113,865,334
Ensembl chr 3:113,847,260...113,865,341 		JBrowse link
G Pnmt phenylethanolamine-N-methyltransferase involved_in IEA GO_REF:0000043 UniProt GO_REF:0000043 NCBI chr10:83,383,019...83,386,557
Ensembl chr10:83,384,923...83,386,556 		JBrowse link
G Th tyrosine hydroxylase involved_in IDA
IEA		 GO_REF:0000043
GO_REF:0000002		 UniProt
InterPro
RGD		 PMID:20025246 GO_REF:0000002 GO_REF:0000043, RGD:4139888 NCBI chr 1:207,500,959...207,508,276
Ensembl chr 1:198,071,503...198,109,767 		JBrowse link
catecholamine catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Comt catechol-O-methyltransferase involved_in ISO
IEA
IBA
ISS		 (PMID:11559542), (PMID:15645182), (PMID:21846718)
GO_REF:0000104
GO_REF:0000033
GO_REF:0000107
GO_REF:0000024		 RGD
UniProt
GO_Central
Ensembl		 PMID:11559542 PMID:15645182 PMID:21846718 GO_REF:0000024 GO_REF:0000033 GO_REF:0000104 GO_REF:0000107 NCBI chr11:96,072,371...96,091,956
Ensembl chr11:82,568,025...82,587,642 		JBrowse link
G Lrtomt leucine rich transmembrane and O-methyltransferase domain containing involved_in ISS
IEA
ISO
IBA		 GO_REF:0000024
GO_REF:0000107
(PMID:18794526)
GO_REF:0000033		 UniProt
Ensembl
RGD
GO_Central		 PMID:18794526 GO_REF:0000024 GO_REF:0000033 GO_REF:0000107 NCBI chr 1:156,266,655...156,268,704
Ensembl chr 1:156,266,655...156,268,704 		JBrowse link
G Maoa monoamine oxidase A NAS RGD PMID:12388421 RGD:629546 NCBI chr  X:8,615,239...8,681,372
Ensembl chr  X:6,030,795...6,099,593 		JBrowse link
catecholamine metabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Atp7a ATPase copper transporting alpha acts_upstream_of
acts_upstream_of_or_within		 ISO MGI:1856098 (PMID:17511) RGD PMID:17511 NCBI chr  X:75,159,635...75,267,094
Ensembl chr  X:71,094,202...71,198,354 		JBrowse link
G Comt catechol-O-methyltransferase acts_upstream_of_or_within
involved_in		 ISO
IEA		 MGI:2178542 (PMID:11849292)
GO_REF:0000002
GO_REF:0000043		 RGD
InterPro
UniProt		 PMID:11849292 GO_REF:0000002 GO_REF:0000043 NCBI chr11:96,072,371...96,091,956
Ensembl chr11:82,568,025...82,587,642 		JBrowse link
G Dbh dopamine beta-hydroxylase IC RGD PMID:11521740 RGD:1625401 NCBI chr 3:30,886,313...30,903,313
Ensembl chr 3:10,488,260...10,505,248 		JBrowse link
G Ddc dopa decarboxylase involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr14:86,378,685...86,469,189
Ensembl chr14:86,378,685...86,469,208 		JBrowse link
G Lrtomt leucine rich transmembrane and O-methyltransferase domain containing involved_in IEA GO_REF:0000043 UniProt GO_REF:0000043 NCBI chr 1:156,266,655...156,268,704
Ensembl chr 1:156,266,655...156,268,704 		JBrowse link
G Maoa monoamine oxidase A involved_in IEA GO_REF:0000043 UniProt GO_REF:0000043 NCBI chr  X:8,615,239...8,681,372
Ensembl chr  X:6,030,795...6,099,593 		JBrowse link
G Mtpn myotrophin IEP RGD PMID:12051753 RGD:625450 NCBI chr 4:64,159,273...64,186,686
Ensembl chr 4:64,157,641...64,186,724 		JBrowse link
G Sult1a1 sulfotransferase family 1A member 1 IDA RGD PMID:6959650 RGD:2301075 NCBI chr 1:181,272,022...181,276,750
Ensembl chr 1:181,272,023...181,275,562 		JBrowse link
G Sult1d1 sulfotransferase family 1D, member 1 involved_in IEA GO_REF:0000043 UniProt GO_REF:0000043 NCBI chr14:20,441,135...20,476,341
Ensembl chr14:20,441,924...20,476,341 		JBrowse link
dopamine biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Agtr1a angiotensin II receptor, type 1a IMP RGD PMID:20097214 RGD:6903884 NCBI chr17:34,173,446...34,226,892
Ensembl chr17:34,174,429...34,226,946 		JBrowse link
G Agtr2 angiotensin II receptor, type 2 IMP RGD PMID:20097214 RGD:6903884 NCBI chr  X:112,119,876...112,124,060
Ensembl chr  X:112,120,228...112,124,057 		JBrowse link
G Chrna7 cholinergic receptor nicotinic alpha 7 subunit IEP RGD PMID:12438507 RGD:704388 NCBI chr 1:126,123,425...126,249,181
Ensembl chr 1:116,714,711...116,837,240 		JBrowse link
G Cyp2d4 cytochrome P450, family 2, subfamily d, polypeptide 4 IDA RGD PMID:19818757 RGD:5143981 NCBI chr 7:115,762,662...115,771,832
Ensembl chr 7:113,881,618...113,891,759 		JBrowse link
G Dao D-amino-acid oxidase involved_in ISO
IEA
ISS		 (PMID:17303072)
GO_REF:0000107
(PMID:17042912)
GO_REF:0000024		 RGD
Ensembl
UniProt		 PMID:17042912 PMID:17303072 GO_REF:0000024 GO_REF:0000107 NCBI chr12:42,592,342...42,613,046
Ensembl chr12:42,592,343...42,612,741 		JBrowse link
G Ddc dopa decarboxylase involved_in IDA
ISO
IEA		 (PMID:19703902)
GO_REF:0000107
GO_REF:0000041		 RGD
Ensembl
UniProt		 PMID:19703902 PMID:12703659 GO_REF:0000041 GO_REF:0000107, RGD:4139893 NCBI chr14:86,378,685...86,469,189
Ensembl chr14:86,378,685...86,469,208 		JBrowse link
G Gch1 GTP cyclohydrolase 1 involved_in ISO (PMID:16338639) RGD PMID:16338639 NCBI chr15:20,404,267...20,437,727
Ensembl chr15:20,402,527...20,437,698 		JBrowse link
G Gpr37 G protein-coupled receptor 37 acts_upstream_of_or_within ISO
IEA		 MGI:3027995 (PMID:15218106)
GO_REF:0000107		 RGD
Ensembl		 PMID:15218106 GO_REF:0000107 NCBI chr 4:54,138,860...54,160,927
Ensembl chr 4:54,138,870...54,161,001 		JBrowse link
G Nr4a2 nuclear receptor subfamily 4, group A, member 2 acts_upstream_of_or_within ISO MGI:2429971 (PMID:16782508), (PMID:9608532) RGD PMID:9608532 PMID:16782508 NCBI chr 3:62,098,739...62,115,926
Ensembl chr 3:41,689,851...41,697,877 		JBrowse link
G Slc6a3 solute carrier family 6 member 3 acts_upstream_of_or_within ISO
IEA		 MGI:2386303 (PMID:9520487)
GO_REF:0000107		 RGD
Ensembl		 PMID:9520487 GO_REF:0000107 NCBI chr 1:31,537,990...31,578,962
Ensembl chr 1:29,709,443...29,750,413 		JBrowse link
G Snca synuclein alpha acts_upstream_of_or_within ISO
IEA		 MGI:1888382 (PMID:10707987)
GO_REF:0000107		 RGD
Ensembl		 PMID:10707987 GO_REF:0000107 NCBI chr 4:91,026,474...91,127,444
Ensembl chr 4:89,696,420...89,796,262 		JBrowse link
G Tgfb2 transforming growth factor, beta 2 involved_in ISS
IEA
ISO		 GO_REF:0000024
GO_REF:0000107
(PMID:16257223)		 UniProt
Ensembl
RGD		 PMID:16257223 GO_REF:0000024 GO_REF:0000107 NCBI chr13:100,691,540...100,793,227
Ensembl chr13:98,160,087...98,261,405 		JBrowse link
G Th tyrosine hydroxylase involved_in IEA
ISO		 GO_REF:0000041
(PMID:12457228), (PMID:19703902)		 UniProt
RGD		 PMID:12457228 PMID:19703902 GO_REF:0000041 NCBI chr 1:207,500,959...207,508,276
Ensembl chr 1:198,071,503...198,109,767 		JBrowse link
dopamine biosynthetic process from tyrosine term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Th tyrosine hydroxylase acts_upstream_of_or_within
involved_in		 IDA
ISO
IBA
IMP		 MGI:1860450 (PMID:7592982), (PMID:7715703), (PMID:9520487)
GO_REF:0000033
PMID:11943812		 RGD
GO_Central		 PMID:7592982 PMID:7715703 PMID:9520487 PMID:2427363 PMID:11943812 More... GO_REF:0000033, RGD:1580046, RGD:5129111, RGD:5130972 NCBI chr 1:207,500,959...207,508,276
Ensembl chr 1:198,071,503...198,109,767 		JBrowse link
dopamine catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Comt catechol-O-methyltransferase acts_upstream_of_or_within ISO (PMID:9520487) RGD PMID:9520487 NCBI chr11:96,072,371...96,091,956
Ensembl chr11:82,568,025...82,587,642 		JBrowse link
G Dbh dopamine beta-hydroxylase involved_in
acts_upstream_of_or_within		 ISO
IEA
IBA
ISS		 (PMID:3443096), (PMID:7961964)
GO_REF:0000107
(PMID:27148966), (PMID:7715704)
MGI:1857556 (PMID:10051631)
GO_REF:0000033
GO_REF:0000024		 RGD
Ensembl
GO_Central
UniProt		 PMID:3443096 PMID:7715704 PMID:7961964 PMID:10051631 PMID:27148966 GO_REF:0000024 GO_REF:0000033 GO_REF:0000107 NCBI chr 3:30,886,313...30,903,313
Ensembl chr 3:10,488,260...10,505,248 		JBrowse link
G Maoa monoamine oxidase A acts_upstream_of_or_within ISO (PMID:9520487) RGD PMID:9520487 NCBI chr  X:8,615,239...8,681,372
Ensembl chr  X:6,030,795...6,099,593 		JBrowse link
G Moxd1 monooxygenase, DBH-like 1 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr 1:22,894,543...22,984,599
Ensembl chr 1:21,075,122...21,161,779 		JBrowse link
G Moxd2 monooxygenase, DBH-like 2 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr 4:70,691,373...70,699,868
Ensembl chr 4:69,724,239...69,733,299 		JBrowse link
G Pde1b phosphodiesterase 1B acts_upstream_of_positive_effect ISO
IEA		 MGI:3604470 (PMID:17559891)
GO_REF:0000107		 RGD
Ensembl		 PMID:17559891 GO_REF:0000107 NCBI chr 7:136,505,834...136,533,034
Ensembl chr 7:134,627,322...134,654,580 		JBrowse link
G Slc6a3 solute carrier family 6 member 3 acts_upstream_of_or_within ISO
IEA		 MGI:2386303 (PMID:9520487)
GO_REF:0000107		 RGD
Ensembl		 PMID:9520487 GO_REF:0000107 NCBI chr 1:31,537,990...31,578,962
Ensembl chr 1:29,709,443...29,750,413 		JBrowse link
G Sult1a1 sulfotransferase family 1A member 1 involved_in ISS
ISO		 GO_REF:0000024
(PMID:8093002)		 UniProt
RGD		 PMID:8093002 GO_REF:0000024 NCBI chr 1:181,272,022...181,276,750
Ensembl chr 1:181,272,023...181,275,562 		JBrowse link
dopamine metabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Atp7a ATPase copper transporting alpha acts_upstream_of_or_within ISO MGI:1856098|MGI:1856466 (PMID:1752214), (PMID:8174230) RGD PMID:1752214 PMID:8174230 MGI:71923 NCBI chr  X:75,159,635...75,267,094
Ensembl chr  X:71,094,202...71,198,354 		JBrowse link
G Comt catechol-O-methyltransferase involved_in
acts_upstream_of_or_within		 IBA
IEA
ISO		 GO_REF:0000033
GO_REF:0000104
MGI:2178542 (PMID:11849292), (PMID:17881525), (PMID:19770404), (PMID:22169008), (PMID:23863468), (PMID:24591155), (PMID:27388330)		 GO_Central
UniProt
RGD		 PMID:11849292 PMID:17881525 PMID:19770404 PMID:22169008 PMID:23863468 More... GO_REF:0000033 GO_REF:0000104 NCBI chr11:96,072,371...96,091,956
Ensembl chr11:82,568,025...82,587,642 		JBrowse link
G Cyp2d4 cytochrome P450, family 2, subfamily d, polypeptide 4 IDA RGD PMID:10945868 RGD:1599723 NCBI chr 7:115,762,662...115,771,832
Ensembl chr 7:113,881,618...113,891,759 		JBrowse link
G Ddc dopa decarboxylase TAS RGD PMID:7567987 RGD:727686 NCBI chr14:86,378,685...86,469,189
Ensembl chr14:86,378,685...86,469,208 		JBrowse link
G Drd2 dopamine receptor D2 acts_upstream_of_or_within ISO
IEA		 (PMID:7925842)
GO_REF:0000107		 RGD
Ensembl		 PMID:7925842 GO_REF:0000107 NCBI chr 8:58,605,403...58,669,339
Ensembl chr 8:49,708,927...49,772,875 		JBrowse link
G Gnat2 G protein subunit alpha transducin 2 acts_upstream_of_or_within ISO
IEA		 MGI:3588845 (PMID:32049342)
GO_REF:0000107		 RGD
Ensembl		 PMID:32049342 GO_REF:0000107 NCBI chr 2:195,726,371...195,735,866
Ensembl chr 2:195,726,762...195,735,866 		JBrowse link
G Grin2a glutamate ionotropic receptor NMDA type subunit 2A acts_upstream_of_or_within ISO
IEA		 MGI:1928285 (PMID:11160454)
GO_REF:0000107		 RGD
Ensembl		 PMID:11160454 GO_REF:0000107 NCBI chr10:6,136,458...6,560,003
Ensembl chr10:5,631,369...6,044,637 		JBrowse link
G Hprt1 hypoxanthine phosphoribosyltransferase 1 acts_upstream_of_or_within ISO
IEA		 MGI:1857299 (PMID:1432691), (PMID:7509865), (PMID:9886073)
GO_REF:0000107		 RGD
Ensembl		 PMID:1432691 PMID:7509865 PMID:9886073 GO_REF:0000107 NCBI chr  X:132,736,175...132,768,149
Ensembl chr  X:132,736,096...132,768,154 		JBrowse link
G Lrtomt leucine rich transmembrane and O-methyltransferase domain containing involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr 1:156,266,655...156,268,704
Ensembl chr 1:156,266,655...156,268,704 		JBrowse link
G Myo5a myosin VA IMP RGD PMID:29217155 RGD:42721980 NCBI chr 8:84,692,524...84,860,564
Ensembl chr 8:75,812,412...75,975,918 		JBrowse link
G Ndufs4 NADH:ubiquinone oxidoreductase subunit S4 acts_upstream_of_or_within ISO MGI:3527173 (PMID:28327638) RGD PMID:28327638 NCBI chr 2:47,684,420...47,794,914
Ensembl chr 2:45,951,313...46,061,846 		JBrowse link
G Npr1 natriuretic peptide receptor 1 IMP RGD PMID:15544851 RGD:1580153 NCBI chr 2:175,934,181...175,950,118
Ensembl chr 2:175,934,181...175,949,505 		JBrowse link
G Nr4a2 nuclear receptor subfamily 4, group A, member 2 acts_upstream_of_or_within ISO MGI:2429971 (PMID:12385813) RGD PMID:12385813 NCBI chr 3:62,098,739...62,115,926
Ensembl chr 3:41,689,851...41,697,877 		JBrowse link
G Prkn parkin RBR E3 ubiquitin protein ligase NOT|acts_upstream_of_or_within ISO MGI:3055212 (PMID:15684050)
MGI:2678247 (PMID:12915482)		 RGD PMID:12915482 PMID:15684050 NCBI chr 1:51,236,410...52,430,242
Ensembl chr 1:48,690,556...49,882,555 		JBrowse link
G Rnls renalase, FAD-dependent amine oxidase acts_upstream_of_or_within ISO MGI:5433853 (PMID:21178975) RGD PMID:21178975 NCBI chr 1:231,037,481...231,309,855
Ensembl chr 1:231,037,486...231,309,823 		JBrowse link
G Slc1a1 solute carrier family 1 member 1 involved_in ISO
IEA		 (PMID:28507136)
GO_REF:0000107		 RGD
Ensembl		 PMID:28507136 GO_REF:0000107 NCBI chr 1:235,963,455...236,043,572
Ensembl chr 1:226,549,842...226,630,402 		JBrowse link
G Snca synuclein alpha acts_upstream_of_or_within ISO
IEA		 MGI:1889011 (PMID:15465911)
GO_REF:0000107		 RGD
Ensembl		 PMID:15465911 GO_REF:0000107 NCBI chr 4:91,026,474...91,127,444
Ensembl chr 4:89,696,420...89,796,262 		JBrowse link
G Sncaip synuclein, alpha interacting protein involved_in
acts_upstream_of_or_within		 ISS
IEA
ISO		 GO_REF:0000024
GO_REF:0000107
(PMID:14506261)		 ParkinsonsUK-UCL
Ensembl
RGD		 PMID:14506261 GO_REF:0000024 GO_REF:0000107 NCBI chr18:46,205,846...46,343,932
Ensembl chr18:46,207,152...46,343,929 		JBrowse link
G Sncb synuclein, beta acts_upstream_of_or_within ISO MGI:1277151 (PMID:15465911) RGD PMID:15465911 NCBI chr17:9,846,802...9,855,013
Ensembl chr17:9,846,802...9,855,012 		JBrowse link
G Spr sepiapterin reductase acts_upstream_of_or_within ISO MGI:3757641 (PMID:16532389) RGD PMID:16532389 NCBI chr 4:117,671,948...117,676,292
Ensembl chr 4:117,671,949...117,675,678 		JBrowse link
epinephrine biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Pnmt phenylethanolamine-N-methyltransferase involved_in TAS
IEA
IDA
IC		 GO_REF:0000041 UniProt
RGD		 PMID:11514309 PMID:7914070 PMID:7503429 GO_REF:0000041, RGD:628457, RGD:4139902, RGD:4139901 NCBI chr10:83,383,019...83,386,557
Ensembl chr10:83,384,923...83,386,556 		JBrowse link
G Th tyrosine hydroxylase involved_in ISO (PMID:12457228) RGD PMID:12457228 NCBI chr 1:207,500,959...207,508,276
Ensembl chr 1:198,071,503...198,109,767 		JBrowse link
epinephrine metabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Atp7a ATPase copper transporting alpha acts_upstream_of_or_within ISO MGI:1856098|MGI:1856466 (PMID:1752214) RGD PMID:1752214 MGI:71923 NCBI chr  X:75,159,635...75,267,094
Ensembl chr  X:71,094,202...71,198,354 		JBrowse link
G Rnls renalase, FAD-dependent amine oxidase acts_upstream_of_or_within ISO MGI:5433853 (PMID:21178975) RGD PMID:21178975 NCBI chr 1:231,037,481...231,309,855
Ensembl chr 1:231,037,486...231,309,823 		JBrowse link
ethanolamine metabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Chka choline kinase alpha IDA RGD PMID:1577786 RGD:61551 NCBI chr 1:201,076,804...201,125,517
Ensembl chr 1:201,076,860...201,125,516 		JBrowse link
G Gde1 glycerophosphodiester phosphodiesterase 1 involved_in ISS
IEA
ISO
IBA		 GO_REF:0000024
GO_REF:0000107
(PMID:18227059)
GO_REF:0000033		 UniProt
Ensembl
RGD
GO_Central		 PMID:18227059 GO_REF:0000024 GO_REF:0000033 GO_REF:0000107 NCBI chr 1:173,016,984...173,032,396
Ensembl chr 1:172,954,394...173,032,429 		JBrowse link
histamine biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Hdc histidine decarboxylase involved_in
acts_upstream_of_or_within		 ISO
IEA
IBA		 (PMID:22767596)
GO_REF:0000107
MGI:2182618 (PMID:11478947)
GO_REF:0000033
GO_REF:0000041		 RGD
Ensembl
GO_Central
UniProt		 PMID:11478947 PMID:22767596 GO_REF:0000033 GO_REF:0000041 GO_REF:0000107 NCBI chr 3:113,847,256...113,865,334
Ensembl chr 3:113,847,260...113,865,341 		JBrowse link
G Prg3 proteoglycan 3, pro eosinophil major basic protein 2 involved_in ISO
IEA		 (PMID:10318872)
GO_REF:0000107		 RGD
Ensembl		 PMID:10318872 GO_REF:0000107 NCBI chr 3:70,071,970...70,078,103
Ensembl chr 3:70,072,497...70,078,102 		JBrowse link
histamine catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Hnmt histamine N-methyltransferase involved_in ISO
ISS		 (PMID:26206890)
GO_REF:0000024		 RGD
UniProt		 PMID:26206890 GO_REF:0000024 NCBI chr 3:6,591,804...6,623,821
Ensembl chr 3:6,591,463...6,624,012 		JBrowse link
histamine metabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Hdc histidine decarboxylase IDA RGD PMID:4449071 PMID:9525922 PMID:7075603 PMID:5898 RGD:2303726, RGD:2303735, RGD:2303728, RGD:2303727 NCBI chr 3:113,847,256...113,865,334
Ensembl chr 3:113,847,260...113,865,341 		JBrowse link
G Hnmt histamine N-methyltransferase involved_in ISO
IDA		 (PMID:23505051) RGD PMID:23505051 PMID:15739896 RGD:152985534 NCBI chr 3:6,591,804...6,623,821
Ensembl chr 3:6,591,463...6,624,012 		JBrowse link
G Trh thyrotropin releasing hormone involved_in IDA
IBA		 GO_REF:0000033 GO_Central
RGD		 PMID:17760865 GO_REF:0000033, RGD:7241067 NCBI chr 4:126,299,236...126,301,762
Ensembl chr 4:124,742,111...124,744,637 		JBrowse link
L-tryptophan catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Acmsd aminocarboxymuconate semialdehyde decarboxylase IDA RGD PMID:11802786 RGD:70243 NCBI chr13:39,200,412...39,245,954
Ensembl chr13:39,200,314...39,245,209 		JBrowse link
G Afmid arylformamidase involved_in IEA GO_REF:0000043 UniProt GO_REF:0000043 NCBI chr10:103,046,129...103,061,718
Ensembl chr10:103,046,180...103,061,718 		JBrowse link
G Haao 3-hydroxyanthranilate 3,4-dioxygenase involved_in IEA GO_REF:0000104 UniProt GO_REF:0000104 NCBI chr 6:10,845,235...10,864,863
Ensembl chr 6:10,845,771...10,864,877 		JBrowse link
G Ido1 indoleamine 2,3-dioxygenase 1 involved_in IEA GO_REF:0000117
GO_REF:0000043		 UniProt GO_REF:0000043 GO_REF:0000117 NCBI chr16:74,133,259...74,145,328
Ensembl chr16:67,430,578...67,442,730 		JBrowse link
G Ido2 indoleamine 2,3-dioxygenase 2 involved_in IEA GO_REF:0000117
GO_REF:0000043		 UniProt GO_REF:0000043 GO_REF:0000117 NCBI chr16:67,459,158...67,498,052
Ensembl chr16:67,459,190...67,496,324 		JBrowse link
G Il4i1 interleukin 4 induced 1 involved_in ISO (PMID:17356132), (PMID:25767141) RGD PMID:17356132 PMID:25767141 NCBI chr 1:104,435,540...104,461,049
Ensembl chr 1:95,295,601...95,324,562 		JBrowse link
G Kmo kynurenine 3-monooxygenase involved_in IEA GO_REF:0000104
GO_REF:0000002		 UniProt
InterPro		 GO_REF:0000002 GO_REF:0000104 NCBI chr13:87,557,080...87,589,334
Ensembl chr13:87,557,286...87,588,881 		JBrowse link
G Kynu kynureninase involved_in ISO
IEA		 (PMID:17334708)
GO_REF:0000002
GO_REF:0000104		 RGD
InterPro
UniProt		 PMID:17334708 GO_REF:0000002 GO_REF:0000104 NCBI chr 3:27,778,646...27,929,470
Ensembl chr 3:27,778,772...27,929,488 		JBrowse link
G Tdo2 tryptophan 2,3-dioxygenase involved_in IEA GO_REF:0000043
GO_REF:0000117		 UniProt GO_REF:0000043 GO_REF:0000117 NCBI chr 2:167,269,581...167,287,511
Ensembl chr 2:167,269,579...167,287,511 		JBrowse link
L-tryptophan catabolic process to acetyl-CoA term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Kynu kynureninase IDA RGD PMID:7236232 RGD:2303721 NCBI chr 3:27,778,646...27,929,470
Ensembl chr 3:27,778,772...27,929,488 		JBrowse link
G Tdo2 tryptophan 2,3-dioxygenase involved_in IDA
IBA		 GO_REF:0000033 GO_Central
RGD		 PMID:7236232 GO_REF:0000033, RGD:2303721 NCBI chr 2:167,269,581...167,287,511
Ensembl chr 2:167,269,579...167,287,511 		JBrowse link
L-tryptophan catabolic process to indole-3-acetate term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Il4i1 interleukin 4 induced 1 involved_in ISO (PMID:32818467), (PMID:32866000) RGD PMID:32818467 PMID:32866000 NCBI chr 1:104,435,540...104,461,049
Ensembl chr 1:95,295,601...95,324,562 		JBrowse link
L-tryptophan catabolic process to kynurenine term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Afmid arylformamidase involved_in
acts_upstream_of_or_within		 IEA
ISO
IBA		 GO_REF:0000041
GO_REF:0000002
GO_REF:0000104
GO_REF:0000107
(PMID:15866519)
GO_REF:0000033		 UniProt
InterPro
Ensembl
RGD
GO_Central		 PMID:15866519 GO_REF:0000002 GO_REF:0000033 GO_REF:0000041 GO_REF:0000104 GO_REF:0000107 NCBI chr10:103,046,129...103,061,718
Ensembl chr10:103,046,180...103,061,718 		JBrowse link
G Ido1 indoleamine 2,3-dioxygenase 1 involved_in
acts_upstream_of_or_within		 IDA
IEA
ISO
IBA		 GO_REF:0000002
GO_REF:0000107
GO_REF:0000104
(PMID:11751753), (PMID:2419335)
GO_REF:0000033		 InterPro
Ensembl
UniProt
RGD
GO_Central		 PMID:2419335 PMID:11751753 PMID:10719243 PMID:11513477 GO_REF:0000002 GO_REF:0000033 GO_REF:0000104 GO_REF:0000107, RGD:2290190, RGD:2290543 NCBI chr16:74,133,259...74,145,328
Ensembl chr16:67,430,578...67,442,730 		JBrowse link
G Ido2 indoleamine 2,3-dioxygenase 2 involved_in
acts_upstream_of_or_within		 ISO
IEA
IBA		 (PMID:17671174)
GO_REF:0000107
GO_REF:0000002
GO_REF:0000104
(PMID:17499941), (PMID:17671174)
GO_REF:0000033
GO_REF:0000041		 RGD
Ensembl
InterPro
UniProt
GO_Central		 PMID:17499941 PMID:17671174 GO_REF:0000002 GO_REF:0000033 GO_REF:0000041 GO_REF:0000104 GO_REF:0000107 NCBI chr16:67,459,158...67,498,052
Ensembl chr16:67,459,190...67,496,324 		JBrowse link
G Kynu kynureninase involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr 3:27,778,646...27,929,470
Ensembl chr 3:27,778,772...27,929,488 		JBrowse link
G Tdo2 tryptophan 2,3-dioxygenase involved_in ISS
IEA
ISO		 GO_REF:0000024
GO_REF:0000104
GO_REF:0000107
GO_REF:0000002
(PMID:27762317)
GO_REF:0000041		 UniProt
Ensembl
InterPro
RGD		 PMID:27762317 GO_REF:0000002 GO_REF:0000024 GO_REF:0000041 GO_REF:0000104 GO_REF:0000107 NCBI chr 2:167,269,581...167,287,511
Ensembl chr 2:167,269,579...167,287,511 		JBrowse link
L-tryptophan metabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Atp7a ATPase copper transporting alpha acts_upstream_of_or_within ISO MGI:1856102 (PMID:4147174) RGD PMID:4147174 NCBI chr  X:75,159,635...75,267,094
Ensembl chr  X:71,094,202...71,198,354 		JBrowse link
G Tdo2 tryptophan 2,3-dioxygenase IDA RGD PMID:10719243 PMID:3899109 PMID:3400092 RGD:2290190, RGD:2291804, RGD:2290313 NCBI chr 2:167,269,581...167,287,511
Ensembl chr 2:167,269,579...167,287,511 		JBrowse link
N-acylethanolamine metabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Abhd4 abhydrolase domain containing 4, N-acyl phospholipase B acts_upstream_of_or_within ISO (PMID:16818490) RGD PMID:16818490 NCBI chr15:27,697,384...27,716,013
Ensembl chr15:27,704,113...27,716,966 		JBrowse link
G Gde1 glycerophosphodiester phosphodiesterase 1 involved_in
acts_upstream_of_or_within		 ISS
IEA
ISO
IBA		 GO_REF:0000024
GO_REF:0000107
(PMID:21801852)
(PMID:25596343)
GO_REF:0000033		 UniProt
Ensembl
RGD
GO_Central		 PMID:21801852 PMID:25596343 GO_REF:0000024 GO_REF:0000033 GO_REF:0000107 NCBI chr 1:173,016,984...173,032,396
Ensembl chr 1:172,954,394...173,032,429 		JBrowse link
G Gdpd1 glycerophosphodiester phosphodiesterase domain containing 1 involved_in
acts_upstream_of_or_within		 ISS
IEA
ISO
IBA		 GO_REF:0000024
GO_REF:0000107
(PMID:27637550)
(PMID:25596343)
GO_REF:0000033		 UniProt
Ensembl
RGD
GO_Central		 PMID:25596343 PMID:27637550 GO_REF:0000024 GO_REF:0000033 GO_REF:0000107 NCBI chr10:71,840,497...71,883,936
Ensembl chr10:71,840,497...71,883,850 		JBrowse link
G Gdpd3 glycerophosphodiester phosphodiesterase domain containing 3 involved_in ISO (PMID:27637550) RGD PMID:27637550 NCBI chr 1:181,373,505...181,383,063
Ensembl chr 1:181,366,626...181,383,063 		JBrowse link
G Naaa N-acylethanolamine acid amidase involved_in IDA
IEA
ISS
ISO		 PMID:22860206
GO_REF:0000107
GO_REF:0000024
(PMID:15655246), (PMID:30301806)		 Ensembl
UniProt
RGD		 PMID:15655246 PMID:30301806 PMID:22860206 GO_REF:0000024 GO_REF:0000107, RGD:39458030 NCBI chr14:15,777,306...15,796,411
Ensembl chr14:15,777,306...15,796,410 		JBrowse link
G Napepld N-acyl phosphatidylethanolamine phospholipase D involved_in
acts_upstream_of_or_within		 IBA
ISO		 GO_REF:0000033
MGI:3695401 (PMID:14634025), (PMID:16818490)		 GO_Central
RGD		 PMID:14634025 PMID:16818490 GO_REF:0000033 NCBI chr 4:13,360,532...13,398,815
Ensembl chr 4:13,361,006...13,398,748 		JBrowse link
negative regulation of catecholamine metabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Atp7a ATPase copper transporting alpha acts_upstream_of_or_within ISO MGI:1856098 (PMID:17511) RGD PMID:17511 NCBI chr  X:75,159,635...75,267,094
Ensembl chr  X:71,094,202...71,198,354 		JBrowse link
G Nt5dc2 5'-nucleotidase domain containing 2 involved_in IMP PMID:31279527 UniProt PMID:31279527 RGD:408345212 NCBI chr16:6,322,485...6,330,538
Ensembl chr16:6,322,236...6,330,537 		JBrowse link
negative regulation of dopamine biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Nt5dc2 5'-nucleotidase domain containing 2 involved_in IMP PMID:31279527 UniProt PMID:31279527 RGD:408345212 NCBI chr16:6,322,485...6,330,538
Ensembl chr16:6,322,236...6,330,537 		JBrowse link
negative regulation of dopamine metabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Comt catechol-O-methyltransferase IMP RGD PMID:15190105 RGD:2289786 NCBI chr11:96,072,371...96,091,956
Ensembl chr11:82,568,025...82,587,642 		JBrowse link
G Htr2c 5-hydroxytryptamine receptor 2C IMP RGD PMID:17018023 RGD:1625003 NCBI chr  X:115,453,190...115,682,325
Ensembl chr  X:110,641,153...110,870,287 		JBrowse link
G Itgam integrin subunit alpha M involved_in ISO (PMID:18981141) RGD PMID:18981141 NCBI chr 1:182,659,047...182,709,501
Ensembl chr 1:182,659,000...182,709,503 		JBrowse link
G Snca synuclein alpha involved_in IMP PMID:11943812 BHF-UCL PMID:11943812 RGD:5129111 NCBI chr 4:91,026,474...91,127,444
Ensembl chr 4:89,696,420...89,796,262 		JBrowse link
nor-spermidine metabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Sat2 spermidine/spermine N1-acetyltransferase family member 2 involved_in ISO
IEA		 (PMID:12803540)
GO_REF:0000107		 RGD
Ensembl		 PMID:12803540 GO_REF:0000107 NCBI chr10:54,340,756...54,343,507
Ensembl chr10:54,340,372...54,343,224 		JBrowse link
norepinephrine biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Atp7a ATPase copper transporting alpha acts_upstream_of_or_within ISO MGI:1856097|MGI:1856098 (PMID:4405722), (PMID:4858102) RGD PMID:4405722 PMID:4858102 NCBI chr  X:75,159,635...75,267,094
Ensembl chr  X:71,094,202...71,198,354 		JBrowse link
G Dbh dopamine beta-hydroxylase acts_upstream_of_or_within
involved_in		 TAS
IEA
ISO
IBA
ISS
IMP		 GO_REF:0000107
(PMID:27148966), (PMID:7715704)
MGI:1857556 (PMID:10051631), (PMID:9603211)
GO_REF:0000033
GO_REF:0000024
GO_REF:0000041		 Ensembl
RGD
GO_Central
UniProt		 PMID:7715704 PMID:9603211 PMID:10051631 PMID:27148966 PMID:11914591 More... GO_REF:0000024 GO_REF:0000033 GO_REF:0000041 GO_REF:0000107, RGD:727567, RGD:1625403 NCBI chr 3:30,886,313...30,903,313
Ensembl chr 3:10,488,260...10,505,248 		JBrowse link
G Epas1 endothelial PAS domain protein 1 IMP RGD PMID:19457096 RGD:5128877 NCBI chr 6:13,543,252...13,626,147
Ensembl chr 6:7,790,647...7,871,228 		JBrowse link
G Gata3 GATA binding protein 3 acts_upstream_of_or_within ISO
IEA		 MGI:2153826 (PMID:10835639)
GO_REF:0000107		 RGD
Ensembl		 PMID:10835639 GO_REF:0000107 NCBI chr17:68,643,760...68,666,000
Ensembl chr17:68,643,873...68,665,391 		JBrowse link
G Hand2 heart and neural crest derivatives expressed 2 acts_upstream_of_positive_effect ISO
IEA		 (PMID:19008477)
GO_REF:0000107		 RGD
Ensembl		 PMID:19008477 GO_REF:0000107 NCBI chr16:32,917,448...32,920,791
Ensembl chr16:32,917,823...32,919,891 		JBrowse link
G Insm1 INSM transcriptional repressor 1 involved_in ISO (PMID:18094025) RGD PMID:18094025 NCBI chr 3:133,640,030...133,642,963
Ensembl chr 3:133,639,580...133,643,003 		JBrowse link
G Kl Klotho IMP RGD PMID:20086041 RGD:10403068 NCBI chr12:490,402...531,417
Ensembl chr12:490,399...530,080 		JBrowse link
G Moxd1 monooxygenase, DBH-like 1 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr 1:22,894,543...22,984,599
Ensembl chr 1:21,075,122...21,161,779 		JBrowse link
G Moxd2 monooxygenase, DBH-like 2 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr 4:70,691,373...70,699,868
Ensembl chr 4:69,724,239...69,733,299 		JBrowse link
G Th tyrosine hydroxylase involved_in ISO (PMID:12457228) RGD PMID:12457228 NCBI chr 1:207,500,959...207,508,276
Ensembl chr 1:198,071,503...198,109,767 		JBrowse link
norepinephrine metabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Akr1b1 aldo-keto reductase family 1 member B1 IDA RGD PMID:10424772 RGD:8548769 NCBI chr 4:62,932,033...62,946,126
Ensembl chr 4:62,932,031...62,946,157 		JBrowse link
G Atp7a ATPase copper transporting alpha acts_upstream_of_or_within ISO MGI:1856102|MGI:1856466 (PMID:4147174) RGD PMID:4147174 MGI:71923 NCBI chr  X:75,159,635...75,267,094
Ensembl chr  X:71,094,202...71,198,354 		JBrowse link
G Comt catechol-O-methyltransferase acts_upstream_of_or_within ISO MGI:2178542 (PMID:11849292), (PMID:24591155) RGD PMID:11849292 PMID:24591155 NCBI chr11:96,072,371...96,091,956
Ensembl chr11:82,568,025...82,587,642 		JBrowse link
G Ednra endothelin receptor type A involved_in IEA
ISO		 GO_REF:0000107
MGI:2687362 (PMID:25197047)		 Ensembl
RGD		 PMID:25197047 GO_REF:0000107 NCBI chr19:47,137,360...47,207,961
Ensembl chr19:30,233,571...30,297,049 		JBrowse link
G Epas1 endothelial PAS domain protein 1 acts_upstream_of_or_within ISO
IEA		 MGI:1861921 (PMID:9808618)
GO_REF:0000107		 RGD
Ensembl		 PMID:9808618 GO_REF:0000107 NCBI chr 6:13,543,252...13,626,147
Ensembl chr 6:7,790,647...7,871,228 		JBrowse link
G Ly6e lymphocyte antigen 6 family member E acts_upstream_of_or_within ISO MGI:2429638 (PMID:11784869) RGD PMID:11784869 NCBI chr 7:106,935,530...106,939,689
Ensembl chr 7:106,935,761...106,939,689 		JBrowse link
G Pnmt phenylethanolamine-N-methyltransferase IDA RGD PMID:3945626 RGD:5130757 NCBI chr10:83,383,019...83,386,557
Ensembl chr10:83,384,923...83,386,556 		JBrowse link
G Prkn parkin RBR E3 ubiquitin protein ligase acts_upstream_of_or_within ISO
IEA		 MGI:3050230 (PMID:15249681)
GO_REF:0000107		 RGD
Ensembl		 PMID:15249681 GO_REF:0000107 NCBI chr 1:51,236,410...52,430,242
Ensembl chr 1:48,690,556...49,882,555 		JBrowse link
G Rnf180 ring finger protein 180 involved_in
acts_upstream_of_or_within		 IBA
IEA
ISO		 GO_REF:0000033
GO_REF:0000107
(PMID:23926250)		 GO_Central
Ensembl
RGD		 PMID:23926250 GO_REF:0000033 GO_REF:0000107 NCBI chr 2:36,330,285...36,511,168
Ensembl chr 2:36,330,292...36,512,614 		JBrowse link
G Rnls renalase, FAD-dependent amine oxidase acts_upstream_of_or_within ISO MGI:5433853 (PMID:21178975) RGD PMID:21178975 NCBI chr 1:231,037,481...231,309,855
Ensembl chr 1:231,037,486...231,309,823 		JBrowse link
G Rtl4 retrotransposon Gag like 4 acts_upstream_of_or_within ISO MGI:5789261 (PMID:26402067) RGD PMID:26402067 NCBI chr  X:113,027,697...113,438,382
Ensembl chr  X:108,633,651...108,640,050 		JBrowse link
G Slitrk1 SLIT and NTRK-like family, member 1 acts_upstream_of_or_within ISO
IEA		 (PMID:36085162)
GO_REF:0000107		 RGD
Ensembl		 PMID:36085162 GO_REF:0000107 NCBI chr15:85,723,252...85,727,290
Ensembl chr15:85,724,475...85,727,509 		JBrowse link
G Spr sepiapterin reductase acts_upstream_of_or_within ISO MGI:3757641 (PMID:16532389) RGD PMID:16532389 NCBI chr 4:117,671,948...117,676,292
Ensembl chr 4:117,671,949...117,675,678 		JBrowse link
octopamine biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Dbh dopamine beta-hydroxylase involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr 3:30,886,313...30,903,313
Ensembl chr 3:10,488,260...10,505,248 		JBrowse link
G Moxd1 monooxygenase, DBH-like 1 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr 1:22,894,543...22,984,599
Ensembl chr 1:21,075,122...21,161,779 		JBrowse link
G Moxd2 monooxygenase, DBH-like 2 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr 4:70,691,373...70,699,868
Ensembl chr 4:69,724,239...69,733,299 		JBrowse link
octopamine metabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Dbh dopamine beta-hydroxylase IMP RGD PMID:11521740 RGD:1625401 NCBI chr 3:30,886,313...30,903,313
Ensembl chr 3:10,488,260...10,505,248 		JBrowse link
phenylethylamine catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Maob monoamine oxidase B IDA RGD PMID:18539264 RGD:2316732 NCBI chr  X:8,490,405...8,594,065
Ensembl chr  X:5,907,266...6,011,003 		JBrowse link
phenylethylamine metabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Maoa monoamine oxidase A IDA
IMP		 Y402A, Y407A, Y410A had an impact on the properties of the protein while Y402F, Y410F had little effect; the residues are near the C406 FAD binding site RGD PMID:11754741 PMID:11754741 RGD:1600709, RGD:1600709 NCBI chr  X:8,615,239...8,681,372
Ensembl chr  X:6,030,795...6,099,593 		JBrowse link
polyamine biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Amd1 adenosylmethionine decarboxylase 1 involved_in IEA GO_REF:0000043 UniProt GO_REF:0000043 NCBI chr20:43,695,783...43,711,476
Ensembl chr20:43,697,237...43,711,476 		JBrowse link
G Azin1 antizyme inhibitor 1 involved_in IEA GO_REF:0000002
GO_REF:0000043		 InterPro
UniProt		 GO_REF:0000002 GO_REF:0000043 NCBI chr 7:69,654,773...69,681,578
Ensembl chr 7:69,654,663...69,681,578 		JBrowse link
G Azin2 antizyme inhibitor 2 involved_in IEA GO_REF:0000002 InterPro GO_REF:0000002 NCBI chr 5:141,281,310...141,310,415
Ensembl chr 5:141,281,249...141,310,397 		JBrowse link
G Ldc1 leucine decarboxylase 1 involved_in IEA GO_REF:0000043
GO_REF:0000002		 UniProt
InterPro		 GO_REF:0000002 GO_REF:0000043 NCBI chr 5:142,551,120...142,563,217
Ensembl chr 5:142,552,008...142,563,074 		JBrowse link
G LOC120101528 spermidine synthase-like involved_in IEA GO_REF:0000104
GO_REF:0000043		 UniProt GO_REF:0000043 GO_REF:0000104 NCBI chr 3:18,709,548...18,710,782
Ensembl chr 3:18,709,584...18,710,588 		JBrowse link
G Oaz1 ornithine decarboxylase antizyme 1 involved_in IEA GO_REF:0000043 UniProt GO_REF:0000043 NCBI chr 7:8,883,855...8,886,315
Ensembl chr 7:8,883,851...8,886,310 		JBrowse link
G Odc1 ornithine decarboxylase 1 involved_in IEA GO_REF:0000043
GO_REF:0000002		 UniProt
InterPro		 GO_REF:0000002 GO_REF:0000043 NCBI chr 6:46,058,439...46,065,148
Ensembl chr 6:40,329,964...40,336,440 		JBrowse link
G Sat1 spermidine/spermine N1-acetyl transferase 1 involved_in ISO (PMID:15283699) RGD PMID:15283699 NCBI chr  X:40,158,354...40,161,641
Ensembl chr  X:40,157,046...40,196,813 		JBrowse link
G Sat2 spermidine/spermine N1-acetyltransferase family member 2 NOT|involved_in ISO (PMID:15283699) RGD PMID:15283699 NCBI chr10:54,340,756...54,343,507
Ensembl chr10:54,340,372...54,343,224 		JBrowse link
G Sms spermine synthase involved_in IEA GO_REF:0000104
GO_REF:0000043		 UniProt GO_REF:0000043 GO_REF:0000104 NCBI chr  X:37,516,949...37,572,657
Ensembl chr  X:37,516,931...37,570,822
Ensembl chr 3:37,516,931...37,570,822 		JBrowse link
G Smsl1 spermine synthase like 1 involved_in IEA GO_REF:0000043
GO_REF:0000104		 UniProt GO_REF:0000043 GO_REF:0000104 NCBI chr13:82,435,500...82,436,942
Ensembl chr13:82,435,520...82,437,158 		JBrowse link
G Srm spermidine synthase involved_in IEA GO_REF:0000043
GO_REF:0000104		 UniProt GO_REF:0000043 GO_REF:0000104 NCBI chr 5:159,025,875...159,029,076
Ensembl chr 5:159,025,873...159,029,405 		JBrowse link
polyamine catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Paox polyamine oxidase acts_upstream_of_or_within
involved_in		 IDA
IEA
ISO		 GO_REF:0000107
(PMID:12660232)
(PMID:12477380)		 Ensembl
RGD		 PMID:12477380 PMID:12660232 PMID:15541750 GO_REF:0000107, RGD:7244190 NCBI chr 1:194,919,655...194,928,498
Ensembl chr 1:194,903,273...194,928,504 		JBrowse link
G Sat1 spermidine/spermine N1-acetyl transferase 1 IDA RGD PMID:15541750 RGD:7244190 NCBI chr  X:40,158,354...40,161,641
Ensembl chr  X:40,157,046...40,196,813 		JBrowse link
G Smox spermine oxidase involved_in ISO (PMID:12477380) RGD PMID:12477380 NCBI chr 3:118,731,814...118,767,242
Ensembl chr 3:118,731,900...118,765,710
Ensembl chr  X:118,731,900...118,765,710 		JBrowse link
polyamine deacetylation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Hdac10 histone deacetylase 10 involved_in ISS
ISO		 GO_REF:0000024
(PMID:28516954)		 UniProt
RGD		 PMID:28516954 GO_REF:0000024 NCBI chr 7:120,199,126...120,205,850
Ensembl chr 7:120,199,129...120,204,228 		JBrowse link
G Hdac6 histone deacetylase 6 NOT|involved_in ISO (PMID:28516954) RGD PMID:28516954 NCBI chr  X:14,550,645...14,572,445
Ensembl chr  X:14,551,044...14,572,441 		JBrowse link
polyamine metabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Amd1 adenosylmethionine decarboxylase 1 IDA RGD PMID:10430362 RGD:1578320 NCBI chr20:43,695,783...43,711,476
Ensembl chr20:43,697,237...43,711,476 		JBrowse link
G Odc1 ornithine decarboxylase 1 IDA RGD PMID:10430362 RGD:1578320 NCBI chr 6:46,058,439...46,065,148
Ensembl chr 6:40,329,964...40,336,440 		JBrowse link
G Sat1 spermidine/spermine N1-acetyl transferase 1 IDA RGD PMID:11172929 RGD:1599544 NCBI chr  X:40,158,354...40,161,641
Ensembl chr  X:40,157,046...40,196,813 		JBrowse link
G Srm spermidine synthase involved_in IEA GO_REF:0000002 InterPro GO_REF:0000002 NCBI chr 5:159,025,875...159,029,076
Ensembl chr 5:159,025,873...159,029,405 		JBrowse link
positive regulation of dopamine biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Epas1 endothelial PAS domain protein 1 IMP RGD PMID:19457096 RGD:5128877 NCBI chr 6:13,543,252...13,626,147
Ensembl chr 6:7,790,647...7,871,228 		JBrowse link
G Park7 Parkinsonism associated deglycase involved_in ISS
ISO		 GO_REF:0000024
(PMID:19703902)		 ParkinsonsUK-UCL
RGD		 PMID:19703902 GO_REF:0000024 NCBI chr 5:166,636,551...166,659,825
Ensembl chr 5:161,353,719...161,376,970 		JBrowse link
G Vps35 VPS35 retromer complex component involved_in ISO
IEA		 (PMID:26203154)
GO_REF:0000107		 RGD
Ensembl		 PMID:26203154 GO_REF:0000107 NCBI chr19:21,765,771...21,801,620
Ensembl chr19:21,765,749...21,801,618 		JBrowse link
positive regulation of dopamine metabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Abat 4-aminobutyrate aminotransferase IMP RGD PMID:11239920 RGD:10047061 NCBI chr10:7,503,351...7,599,474
Ensembl chr10:6,999,819...7,092,835 		JBrowse link
G Gpr37 G protein-coupled receptor 37 acts_upstream_of_or_within ISO
IEA		 MGI:3027995 (PMID:15218106)
GO_REF:0000107		 RGD
Ensembl		 PMID:15218106 GO_REF:0000107 NCBI chr 4:54,138,860...54,160,927
Ensembl chr 4:54,138,870...54,161,001 		JBrowse link
G Hprt1 hypoxanthine phosphoribosyltransferase 1 involved_in ISO
IEA		 (PMID:8643611)
GO_REF:0000107		 RGD
Ensembl		 PMID:8643611 GO_REF:0000107 NCBI chr  X:132,736,175...132,768,149
Ensembl chr  X:132,736,096...132,768,154 		JBrowse link
G Maob monoamine oxidase B IMP RGD PMID:12175458 RGD:2316765 NCBI chr  X:8,490,405...8,594,065
Ensembl chr  X:5,907,266...6,011,003 		JBrowse link
G Npy neuropeptide Y IDA RGD PMID:19579268 RGD:10448966 NCBI chr 4:80,212,111...80,219,310
Ensembl chr 4:78,881,264...78,888,495 		JBrowse link
positive regulation of spermidine biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Paox polyamine oxidase involved_in ISO
IEA		 (PMID:16354669)
GO_REF:0000107		 RGD
Ensembl		 PMID:16354669 GO_REF:0000107 NCBI chr 1:194,919,655...194,928,498
Ensembl chr 1:194,903,273...194,928,504 		JBrowse link
putrescine acetylation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Sat2 spermidine/spermine N1-acetyltransferase family member 2 involved_in ISO
IEA		 (PMID:12803540)
GO_REF:0000107		 RGD
Ensembl		 PMID:12803540 GO_REF:0000107 NCBI chr10:54,340,756...54,343,507
Ensembl chr10:54,340,372...54,343,224 		JBrowse link
putrescine biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Odc1 ornithine decarboxylase 1 IDA RGD PMID:10430362 PMID:1415709 RGD:1578320, RGD:7242912 NCBI chr 6:46,058,439...46,065,148
Ensembl chr 6:40,329,964...40,336,440 		JBrowse link
G Paox polyamine oxidase involved_in ISO
IEA		 (PMID:16354669)
GO_REF:0000107		 RGD
Ensembl		 PMID:16354669 GO_REF:0000107 NCBI chr 1:194,919,655...194,928,498
Ensembl chr 1:194,903,273...194,928,504 		JBrowse link
putrescine biosynthetic process from arginine, via agmatine term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Agmat agmatinase involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr 5:154,043,665...154,074,278
Ensembl chr 5:154,060,151...154,074,276 		JBrowse link
putrescine biosynthetic process from arginine, via ornithine term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Azin1 antizyme inhibitor 1 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr 7:69,654,773...69,681,578
Ensembl chr 7:69,654,663...69,681,578 		JBrowse link
G Azin2 antizyme inhibitor 2 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr 5:141,281,310...141,310,415
Ensembl chr 5:141,281,249...141,310,397 		JBrowse link
G Ldc1 leucine decarboxylase 1 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr 5:142,551,120...142,563,217
Ensembl chr 5:142,552,008...142,563,074 		JBrowse link
G Odc1 ornithine decarboxylase 1 involved_in ISS
IEA
ISO
IBA		 GO_REF:0000024
GO_REF:0000107
(PMID:24967154)
GO_REF:0000033
GO_REF:0000041		 UniProt
Ensembl
RGD
GO_Central		 PMID:24967154 GO_REF:0000024 GO_REF:0000033 GO_REF:0000041 GO_REF:0000107 NCBI chr 6:46,058,439...46,065,148
Ensembl chr 6:40,329,964...40,336,440 		JBrowse link
putrescine catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Paox polyamine oxidase involved_in ISO
IEA
IDA		 (PMID:16354669)
GO_REF:0000107		 RGD
Ensembl		 PMID:16354669 PMID:16354669 GO_REF:0000107, RGD:12790650 NCBI chr 1:194,919,655...194,928,498
Ensembl chr 1:194,903,273...194,928,504 		JBrowse link
G Sat1 spermidine/spermine N1-acetyl transferase 1 involved_in IEA GO_REF:0000041 UniProt GO_REF:0000041 NCBI chr  X:40,158,354...40,161,641
Ensembl chr  X:40,157,046...40,196,813 		JBrowse link
putrescine metabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Aoc1 amine oxidase, copper containing 1 involved_in ISS
IBA
ISO		 GO_REF:0000024
GO_REF:0000033
(PMID:8144586)		 UniProt
GO_Central
RGD		 PMID:8144586 GO_REF:0000024 GO_REF:0000033 NCBI chr 4:77,812,260...77,831,846
Ensembl chr 4:77,812,260...77,831,840 		JBrowse link
G Doxl1 diamine oxidase-like protein 1 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr 4:77,879,428...77,883,044
Ensembl chr 4:77,879,410...77,883,044 		JBrowse link
G Doxl2 diamine oxidase-like protein 2 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr 4:77,934,551...77,938,333
Ensembl chr 4:77,934,545...77,938,331 		JBrowse link
G Svs1 seminal vesicle secretory protein 1 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr 4:77,955,478...77,960,376
Ensembl chr 4:77,955,478...77,960,376 		JBrowse link
regulation of catecholamine metabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Vhl von Hippel-Lindau tumor suppressor IMP RGD PMID:11912140 RGD:619592 NCBI chr 4:146,772,483...146,779,376
Ensembl chr 4:146,772,468...146,779,377 		JBrowse link
regulation of dopamine biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Aldh2 aldehyde dehydrogenase 2 family member involved_in ISS
IEA
ISO		 GO_REF:0000024
GO_REF:0000107
(PMID:26711020)		 UniProt
Ensembl
RGD		 PMID:26711020 GO_REF:0000024 GO_REF:0000107 NCBI chr12:40,610,244...40,643,220
Ensembl chr12:34,901,219...34,982,521 		JBrowse link
regulation of dopamine metabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Chrnb2 cholinergic receptor nicotinic beta 2 subunit acts_upstream_of_or_within ISO MGI:1926253 (PMID:11282258) RGD PMID:11282258 NCBI chr 2:177,479,091...177,487,306
Ensembl chr 2:175,181,402...175,189,619 		JBrowse link
G Drd1 dopamine receptor D1 acts_upstream_of_or_within ISO
IEA		 MGI:1857158 (PMID:11438590)
GO_REF:0000107		 RGD
Ensembl		 PMID:11438590 GO_REF:0000107 NCBI chr17:10,545,488...10,550,029
Ensembl chr17:10,540,558...10,545,002 		JBrowse link
G Drd4 dopamine receptor D4 acts_upstream_of_or_within ISO
IEA		 MGI:2178631 (PMID:9323127)
GO_REF:0000107		 RGD
Ensembl		 PMID:9323127 GO_REF:0000107 NCBI chr 1:205,825,937...205,829,124
Ensembl chr 1:196,396,366...196,399,553 		JBrowse link
G Htr1a 5-hydroxytryptamine receptor 1A involved_in ISS
ISO		 GO_REF:0000024
(PMID:11080193)		 UniProt
RGD		 PMID:11080193 GO_REF:0000024 NCBI chr 2:36,693,462...36,698,026
Ensembl chr 2:36,694,174...36,695,442 		JBrowse link
G Nr4a2 nuclear receptor subfamily 4, group A, member 2 acts_upstream_of_or_within ISO (PMID:12915123) RGD PMID:12915123 NCBI chr 3:62,098,739...62,115,926
Ensembl chr 3:41,689,851...41,697,877 		JBrowse link
G Pnkd PNKD metallo-beta-lactamase domain containing acts_upstream_of_or_within ISO
IEA		 MGI:5006973 (PMID:22214848)
GO_REF:0000107		 RGD
Ensembl		 PMID:22214848 GO_REF:0000107 NCBI chr 9:75,868,620...75,937,126
Ensembl chr 9:75,867,468...75,937,124 		JBrowse link
G Prkn parkin RBR E3 ubiquitin protein ligase involved_in ISO
IEA		 (PMID:22314364)
GO_REF:0000107		 RGD
Ensembl		 PMID:22314364 GO_REF:0000107 NCBI chr 1:51,236,410...52,430,242
Ensembl chr 1:48,690,556...49,882,555 		JBrowse link
G Slc6a3 solute carrier family 6 member 3 acts_upstream_of_or_within ISO
IEA		 MGI:2386303 (PMID:9247269), (PMID:9520487)
GO_REF:0000107		 RGD
Ensembl		 PMID:9247269 PMID:9520487 GO_REF:0000107 NCBI chr 1:31,537,990...31,578,962
Ensembl chr 1:29,709,443...29,750,413 		JBrowse link
G Tacr3 tachykinin receptor 3 IDA RGD PMID:8574643 RGD:2305963 NCBI chr 2:223,266,536...223,363,791
Ensembl chr 2:223,266,536...223,363,791 		JBrowse link
serotonin biosynthetic process from tryptophan term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Cyp2d4 cytochrome P450, family 2, subfamily d, polypeptide 4 IDA RGD PMID:23098818 RGD:11353778 NCBI chr 7:115,762,662...115,771,832
Ensembl chr 7:113,881,618...113,891,759 		JBrowse link
G Tph1 tryptophan hydroxylase 1 TAS RGD PMID:12153488 RGD:625621 NCBI chr 1:97,157,375...97,178,415
Ensembl chr 1:97,157,409...97,178,344 		JBrowse link
spermidine acetylation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Sat1 spermidine/spermine N1-acetyl transferase 1 involved_in IDA
IBA
ISO		 GO_REF:0000033
(PMID:15283699)		 GO_Central
RGD		 PMID:15283699 PMID:15541750 GO_REF:0000033, RGD:7244190 NCBI chr  X:40,158,354...40,161,641
Ensembl chr  X:40,157,046...40,196,813 		JBrowse link
G Sat2 spermidine/spermine N1-acetyltransferase family member 2 NOT|involved_in ISO (PMID:15283699)
(PMID:12803540)		 RGD PMID:12803540 PMID:15283699 NCBI chr10:54,340,756...54,343,507
Ensembl chr10:54,340,372...54,343,224 		JBrowse link
G Satl1 spermidine/spermine N1-acetyl transferase-like 1 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr  X:77,453,357...77,469,100
Ensembl chr  X:77,453,357...77,469,158 		JBrowse link
spermidine biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Amd1 adenosylmethionine decarboxylase 1 involved_in IDA
IEA
IBA
IMP		 GO_REF:0000002
GO_REF:0000043
GO_REF:0000033		 InterPro
UniProt
GO_Central
RGD		 PMID:10430362 PMID:1415709 PMID:10712236 GO_REF:0000002 GO_REF:0000033 GO_REF:0000043, RGD:1578320, RGD:7242912, RGD:7242911 NCBI chr20:43,695,783...43,711,476
Ensembl chr20:43,697,237...43,711,476 		JBrowse link
G LOC120101528 spermidine synthase-like involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr 3:18,709,548...18,710,782
Ensembl chr 3:18,709,584...18,710,588 		JBrowse link
G Srm spermidine synthase involved_in IDA
IBA
ISO
IMP		 GO_REF:0000033
(PMID:17585781)		 GO_Central
RGD		 PMID:17585781 PMID:12843627 PMID:8494549 PMID:16931179 GO_REF:0000033, RGD:1359042, RGD:7242928, RGD:7242920 NCBI chr 5:159,025,875...159,029,076
Ensembl chr 5:159,025,873...159,029,405 		JBrowse link
spermidine catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Dhps deoxyhypusine synthase IDA RGD PMID:7721768 RGD:2316236 NCBI chr19:23,082,454...23,086,544
Ensembl chr19:23,082,448...23,086,881 		JBrowse link
G Paox polyamine oxidase involved_in IDA
IEA
IBA
ISO		 GO_REF:0000107
GO_REF:0000033
PMID:16354669
(PMID:16354669)		 Ensembl
GO_Central
RGD		 PMID:16354669 PMID:7560898 PMID:16354669 GO_REF:0000033 GO_REF:0000107, RGD:7244191, RGD:12790650 NCBI chr 1:194,919,655...194,928,498
Ensembl chr 1:194,903,273...194,928,504 		JBrowse link
spermidine deacetylation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Hdac10 histone deacetylase 10 involved_in ISO
ISS		 (PMID:28516954)
GO_REF:0000024		 RGD
UniProt		 PMID:28516954 GO_REF:0000024 NCBI chr 7:120,199,126...120,205,850
Ensembl chr 7:120,199,129...120,204,228 		JBrowse link
G Hdac6 histone deacetylase 6 NOT|involved_in ISO (PMID:28516954) RGD PMID:28516954 NCBI chr  X:14,550,645...14,572,445
Ensembl chr  X:14,551,044...14,572,441 		JBrowse link
spermidine metabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Dhps deoxyhypusine synthase involved_in ISO
IEA
IBA		 (PMID:23525104)
GO_REF:0000107
GO_REF:0000033		 RGD
Ensembl
GO_Central		 PMID:23525104 GO_REF:0000033 GO_REF:0000107 NCBI chr19:23,082,454...23,086,544
Ensembl chr19:23,082,448...23,086,881 		JBrowse link
spermine acetylation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Sat1 spermidine/spermine N1-acetyl transferase 1 IC RGD PMID:15541750 RGD:7244190 NCBI chr  X:40,158,354...40,161,641
Ensembl chr  X:40,157,046...40,196,813 		JBrowse link
G Sat2 spermidine/spermine N1-acetyltransferase family member 2 involved_in ISO
IEA		 (PMID:12803540)
GO_REF:0000107		 RGD
Ensembl		 PMID:12803540 GO_REF:0000107 NCBI chr10:54,340,756...54,343,507
Ensembl chr10:54,340,372...54,343,224 		JBrowse link
spermine biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Amd1 adenosylmethionine decarboxylase 1 involved_in IDA
IBA
IEA
IMP		 GO_REF:0000033
GO_REF:0000002		 GO_Central
InterPro
RGD		 PMID:10430362 PMID:1415709 PMID:10712236 GO_REF:0000002 GO_REF:0000033, RGD:1578320, RGD:7242912, RGD:7242911 NCBI chr20:43,695,783...43,711,476
Ensembl chr20:43,697,237...43,711,476 		JBrowse link
G Sms spermine synthase involved_in IMP
IEA
IBA		 GO_REF:0000002
GO_REF:0000033		 InterPro
GO_Central
RGD		 PMID:8494549 GO_REF:0000002 GO_REF:0000033, RGD:7242928 NCBI chr  X:37,516,949...37,572,657
Ensembl chr  X:37,516,931...37,570,822
Ensembl chr 3:37,516,931...37,570,822 		JBrowse link
G Smsl1 spermine synthase like 1 involved_in IBA
IEA		 GO_REF:0000033
GO_REF:0000002		 GO_Central
InterPro		 GO_REF:0000002 GO_REF:0000033 NCBI chr13:82,435,500...82,436,942
Ensembl chr13:82,435,520...82,437,158 		JBrowse link
spermine catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Paox polyamine oxidase involved_in IDA
IEA
ISO		 GO_REF:0000107
PMID:16354669
(PMID:16354669)		 Ensembl
RGD		 PMID:16354669 PMID:7560898 PMID:16354669 GO_REF:0000107, RGD:7244191, RGD:12790650 NCBI chr 1:194,919,655...194,928,498
Ensembl chr 1:194,903,273...194,928,504 		JBrowse link
G Smox spermine oxidase involved_in
acts_upstream_of_or_within		 IDA
IBA
ISO		 GO_REF:0000033
(PMID:12141946)
(PMID:18422650)		 GO_Central
RGD		 PMID:12141946 PMID:18422650 PMID:15541750 GO_REF:0000033, RGD:7244190 NCBI chr 3:118,731,814...118,767,242
Ensembl chr 3:118,731,900...118,765,710
Ensembl chr  X:118,731,900...118,765,710 		JBrowse link
spermine metabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Sms spermine synthase acts_upstream_of_or_within ISO MGI:2180359 (PMID:9467015) RGD PMID:9467015 NCBI chr  X:37,516,949...37,572,657
Ensembl chr  X:37,516,931...37,570,822
Ensembl chr 3:37,516,931...37,570,822 		JBrowse link
Term paths to the root
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  biological_process 20558
    cellular process 19550
      metabolic process 12180
        amine metabolic process 124
          biogenic amine metabolic process 112
            biogenic amine biosynthetic process + 44
            catecholamine metabolic process + 67
            ethanolamine-containing compound metabolic process + 10
            histamine metabolic process + 4
            indolalkylamine metabolic process + 13
            nicotianamine metabolic process + 0
            phenylethylamine metabolic process + 2
            polyamine metabolic process + 23
paths to the root