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ONTOLOGY REPORT - ANNOTATIONS


Term:regulation of amino acid metabolic process
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Accession:GO:0006521 term browser browse the term
Definition:Any process that modulates the frequency, rate or extent of the chemical reactions and pathways involving amino acids.
Synonyms:exact_synonym: regulation of amino acid metabolism
 xref: Reactome:R-HSA-350562 "Regulation of ornithine decarboxylase (ODC)"



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negative regulation of arginine catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Atp2b4 ATPase plasma membrane Ca2+ transporting 4 involved_in ISO (PMID:19278978) RGD PMID:19278978 NCBI chr13:47,708,157...47,807,389
Ensembl chr13:45,156,146...45,255,246
JBrowse link
negative regulation of citrulline biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Atp2b4 ATPase plasma membrane Ca2+ transporting 4 involved_in ISO (PMID:19278978) RGD PMID:19278978 NCBI chr13:47,708,157...47,807,389
Ensembl chr13:45,156,146...45,255,246
JBrowse link
negative regulation of glutamate metabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Atcay ATCAY kinesin light chain interacting caytaxin involved_in ISO
IEA
ISS
(PMID:16899818)
GO_REF:0000107
GO_REF:0000024
RGD
Ensembl
UniProt
PMID:16899818 GO_REF:0000024 GO_REF:0000107 NCBI chr 7:8,487,763...8,511,527
Ensembl chr 7:8,487,763...8,512,663
JBrowse link
negative regulation of ornithine catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Oaz1 ornithine decarboxylase antizyme 1 IDA RGD PMID:8166639 RGD:401851045 NCBI chr 7:9,534,530...9,536,990
Ensembl chr 7:8,883,851...8,886,310
JBrowse link
positive regulation of ammonia assimilation cycle term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Nr1h4 nuclear receptor subfamily 1, group H, member 4 involved_in IEA
ISO
GO_REF:0000107
(PMID:21757002)
Ensembl
RGD
PMID:21757002 GO_REF:0000107 NCBI chr 7:25,733,471...25,829,440
Ensembl chr 7:23,846,122...23,942,047
JBrowse link
positive regulation of glutamate metabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Nr1h4 nuclear receptor subfamily 1, group H, member 4 involved_in ISO (PMID:21757002) RGD PMID:21757002 NCBI chr 7:25,733,471...25,829,440
Ensembl chr 7:23,846,122...23,942,047
JBrowse link
positive regulation of homocysteine metabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Comt catechol-O-methyltransferase IMP RGD PMID:15779086 RGD:2289784 NCBI chr11:96,072,371...96,091,956
Ensembl chr11:82,568,025...82,587,642
JBrowse link
positive regulation of L-dopa biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Park7 Parkinsonism associated deglycase acts_upstream_of ISS
ISO
GO_REF:0000024
(PMID:16731528)
ParkinsonsUK-UCL
RGD
PMID:16731528 GO_REF:0000024 NCBI chr 5:166,636,551...166,659,825
Ensembl chr 5:161,353,719...161,376,970
JBrowse link
regulation of arginine biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Cln3 CLN3 lysosomal/endosomal transmembrane protein, battenin involved_in ISO (PMID:19284480) RGD PMID:19284480 NCBI chr 1:181,156,071...181,169,458
Ensembl chr 1:181,156,073...181,167,434
JBrowse link
regulation of arginine metabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Fh fumarate hydratase involved_in ISS
ISO
GO_REF:0000024
(PMID:23643539)
UniProt
RGD
PMID:23643539 GO_REF:0000024 NCBI chr13:90,056,565...90,082,450
Ensembl chr13:87,524,337...87,550,266
JBrowse link
G Slc7a7 solute carrier family 7 member 7 involved_in
acts_upstream_of_or_within
IBA
ISO
GO_REF:0000033
MGI:3530880 (PMID:17376816)
GO_Central
RGD
PMID:17376816 GO_REF:0000033 NCBI chr15:31,792,122...31,852,732
Ensembl chr15:27,822,091...27,865,648
JBrowse link
regulation of cysteine metabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Slc7a11 solute carrier family 7 member 11 acts_upstream_of_or_within ISO MGI:3608695 (PMID:17200146) RGD PMID:17200146 NCBI chr 2:136,532,912...136,668,560
Ensembl chr 2:133,963,107...134,517,536
JBrowse link
regulation of glutamate metabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Apc APC regulator of WNT signaling pathway IDA RGD PMID:19858196 RGD:6484536 NCBI chr18:26,138,382...26,196,021
Ensembl chr18:25,864,222...25,922,696
JBrowse link
G Slc7a11 solute carrier family 7 member 11 acts_upstream_of_or_within ISO MGI:3608695 (PMID:21490221), (PMID:24548853), (PMID:25429150) RGD PMID:21490221 PMID:24548853 PMID:25429150 NCBI chr 2:136,532,912...136,668,560
Ensembl chr 2:133,963,107...134,517,536
JBrowse link
regulation of glutamine family amino acid metabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Sirt4 sirtuin 4 involved_in ISO (PMID:23562301) RGD PMID:23562301 NCBI chr12:46,785,852...46,800,179
Ensembl chr12:41,131,262...41,139,439
JBrowse link
regulation of ornithine metabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Hnf4a hepatocyte nuclear factor 4, alpha involved_in IEA
ISO
GO_REF:0000107
(PMID:17827783)
Ensembl
RGD
PMID:17827783 GO_REF:0000107 NCBI chr 3:172,606,220...172,667,758
Ensembl chr 3:152,186,787...152,248,320
JBrowse link

Term paths to the root
Path 1
Term Annotations click to browse term
  biological_process 20536
    cellular process 19525
      metabolic process 12160
        primary metabolic process 10746
          amino acid metabolic process 300
            regulation of amino acid metabolic process 13
              negative regulation of amino acid metabolic process + 3
              positive regulation of amino acid metabolic process + 3
              regulation of 1-aminocyclopropane-1-carboxylate metabolic process 0
              regulation of L-tryptophan metabolic process + 0
              regulation of amino acid biosynthetic process + 3
              regulation of arginine metabolic process + 4
              regulation of cysteine metabolic process + 1
              regulation of gamma-aminobutyric acid catabolic process + 0
              regulation of glutamine family amino acid metabolic process + 7
              regulation of homocysteine metabolic process + 1
              regulation of ornithine metabolic process + 2
              regulation of selenocysteine metabolic process + 0
              regulation of tetrapyrrole biosynthetic process from glycine and succinyl-CoA + 0
Path 2
Term Annotations click to browse term
  biological_process 20536
    biological regulation 13822
      regulation of biological process 13376
        regulation of cellular process 13014
          regulation of metabolic process 6834
            regulation of primary metabolic process 5693
              regulation of amino acid metabolic process 13
                negative regulation of amino acid metabolic process + 3
                positive regulation of amino acid metabolic process + 3
                regulation of 1-aminocyclopropane-1-carboxylate metabolic process 0
                regulation of L-tryptophan metabolic process + 0
                regulation of amino acid biosynthetic process + 3
                regulation of arginine metabolic process + 4
                regulation of cysteine metabolic process + 1
                regulation of gamma-aminobutyric acid catabolic process + 0
                regulation of glutamine family amino acid metabolic process + 7
                regulation of homocysteine metabolic process + 1
                regulation of ornithine metabolic process + 2
                regulation of selenocysteine metabolic process + 0
                regulation of tetrapyrrole biosynthetic process from glycine and succinyl-CoA + 0
paths to the root