ONTOLOGY REPORT - ANNOTATIONS
Term: glycoprotein catabolic process
Accession: GO:0006516
browse the term
Definition: The chemical reactions and pathways resulting in the breakdown of a glycoprotein, a protein that contains covalently bound glycose (i.e. monosaccharide) residues; the glycose occurs most commonly as oligosaccharide or fairly small polysaccharide but occasionally as monosaccharide.
Synonyms: exact_synonym: glycoprotein breakdown; glycoprotein catabolism; glycoprotein degradation
G
Edem3
ER degradation enhancing alpha-mannosidase like protein 3
acts_upstream_of_or_within
ISO
(PMID:16431915)
RGD
PMID:16431915
NCBI chr13:63,858,282...63,920,538
Ensembl chr13:63,858,716...63,920,523
G
Fbxo17
F-box protein 17
involved_in
IBA
GO_REF:0000033
GO_Central
GO_REF:0000033
NCBI chr 1:84,002,276...84,024,455
Ensembl chr 1:84,002,267...84,024,453
G
Fbxo2
F-box protein 2
involved_in acts_upstream_of_or_within
IBA ISO
GO_REF:0000033 (PMID:12140560) (PMID:15723043)
GO_Central RGD
PMID:12140560 PMID:15723043
GO_REF:0000033
NCBI chr 5:158,592,926...158,598,355
Ensembl chr 5:158,592,925...158,598,355
G
Fbxo27
F-box protein 27
involved_in
IBA
GO_REF:0000033
GO_Central
GO_REF:0000033
NCBI chr 1:83,965,426...83,987,781
Ensembl chr 1:83,965,986...83,987,778
G
Fbxo44
F-box protein 44
involved_in
IBA
GO_REF:0000033
GO_Central
GO_REF:0000033
NCBI chr 5:158,583,363...158,592,510
Ensembl chr 5:158,583,366...158,592,363
G
Fbxo6
F-box protein 6
involved_in acts_upstream_of_or_within
IBA ISO
GO_REF:0000033 (PMID:15723043)
GO_Central RGD
PMID:15723043
GO_REF:0000033
NCBI chr 5:163,859,909...163,865,693
Ensembl chr 5:158,576,759...158,582,525
G
Glb1
galactosidase, beta 1
involved_in
ISO
(PMID:31720227)
RGD
PMID:31720227
NCBI chr 8:122,963,718...123,036,326
Ensembl chr 8:114,085,508...114,158,127
G
Manba
mannosidase beta
involved_in acts_upstream_of_or_within
ISS ISO IBA
GO_REF:0000024 (PMID:16377659) (PMID:3447593) GO_REF:0000033
UniProt RGD GO_Central
PMID:3447593 PMID:16377659
GO_REF:0000024 GO_REF:0000033
NCBI chr 2:226,583,968...226,676,520
Ensembl chr 2:223,910,432...224,002,983
G
Nccrp1
NCCRP1, F-box associated domain containing
involved_in
IBA
GO_REF:0000033
GO_Central
GO_REF:0000033
NCBI chr 1:83,835,083...83,838,620
Ensembl chr 1:83,835,083...83,838,676
G
Neu2
neuraminidase 2
involved_in
ISO IEA
(PMID:14613940) GO_REF:0000107
RGD Ensembl
PMID:14613940
GO_REF:0000107
NCBI chr 9:95,666,338...95,715,209
Ensembl chr 9:88,249,135...88,267,355
G
Neu4
neuraminidase 4
involved_in
ISO
(PMID:15213228), (PMID:15847605) (PMID:19506080), (PMID:22393058)
RGD
PMID:15213228 PMID:15847605 PMID:19506080 PMID:22393058
NCBI chr 9:101,844,261...101,849,917
Ensembl chr 9:94,396,920...94,402,576
G
Ngly1
N-glycanase 1
involved_in
ISO IBA IEA ISS
(PMID:15358861) GO_REF:0000033 GO_REF:0000002 GO_REF:0000024
RGD GO_Central InterPro UniProt
PMID:15358861
GO_REF:0000002 GO_REF:0000024 GO_REF:0000033
NCBI chr15:11,584,475...11,640,977
Ensembl chr15:9,153,738...9,204,630
G
Stt3b
STT3 oligosaccharyltransferase complex catalytic subunit B
involved_in
ISO
(PMID:22607976)
RGD
PMID:22607976
NCBI chr 8:114,928,678...114,994,027
Ensembl chr 8:114,917,824...114,994,028
G
Gusb
glucuronidase, beta
involved_in
ISO
MGI:1856041 (PMID:23897660)
RGD
PMID:23897660
NCBI chr12:32,337,281...32,350,838
Ensembl chr12:26,697,951...26,726,905
G
Hexb
hexosaminidase subunit beta
involved_in
IEA ISO
GO_REF:0000107 MGI:2429701 (PMID:22451654)
Ensembl RGD
PMID:22451654
GO_REF:0000107
NCBI chr 2:30,218,608...30,238,771
Ensembl chr 2:28,484,012...28,504,223
G
Hyal1
hyaluronidase 1
involved_in
IEA ISO
GO_REF:0000107 MGI:2658730 (PMID:22451654)
Ensembl RGD
PMID:22451654
GO_REF:0000107
NCBI chr 8:117,129,311...117,133,162
Ensembl chr 8:108,250,667...108,260,210
G
Hyal4
hyaluronidase 4
acts_upstream_of_or_within
ISO
(PMID:23086929)
RGD
PMID:23086929
NCBI chr 4:53,256,179...53,274,819
Ensembl chr 4:53,256,179...53,274,819
G
Arsb
arylsulfatase B
involved_in
ISO
MGI:3800577 (PMID:24240681)
RGD
PMID:24240681
NCBI chr 2:26,736,395...26,895,682
Ensembl chr 2:25,002,346...25,162,671
G
Hexa
hexosaminidase subunit alpha
involved_in
ISO
MGI:96074 (PMID:11707436)
RGD
PMID:11707436
NCBI chr 8:68,832,524...68,857,462
Ensembl chr 8:59,936,660...59,962,013
G
Hexb
hexosaminidase subunit beta
involved_in
IEA ISO
GO_REF:0000107 MGI:96073 (PMID:11707436)
Ensembl RGD
PMID:11707436
GO_REF:0000107
NCBI chr 2:30,218,608...30,238,771
Ensembl chr 2:28,484,012...28,504,223
G
Ids
iduronate 2-sulfatase
involved_in
ISO
MGI:5439833 (PMID:30064964)
RGD
PMID:30064964
NCBI chr X:154,070,781...154,093,681
Ensembl chr X:149,025,976...149,046,663
G
Idua
alpha-L-iduronidase
involved_in acts_upstream_of_or_within
ISO
(PMID:24036510) MGI:2176236|MGI:4415188 (PMID:19751987), (PMID:25854773) MGI:2176236|MGI:4415188 (PMID:19751987), (PMID:19834056)
RGD
PMID:19751987 PMID:19834056 PMID:24036510 PMID:25854773
NCBI chr14:1,031,588...1,059,494
Ensembl chr14:1,032,171...1,046,522
G
Cela1
chymotrypsin like elastase 1
acts_upstream_of_or_within
ISO
(PMID:24793170)
RGD
PMID:24793170
NCBI chr 7:133,651,939...133,665,136
Ensembl chr 7:131,742,002...131,786,285
G
Ctsl
cathepsin L
involved_in
ISS ISO
GO_REF:0000024 (PMID:12417635)
UniProt RGD
PMID:12417635
GO_REF:0000024
NCBI chr17:770,104...776,266
Ensembl chr17:764,309...770,548
G
Mmp12
matrix metallopeptidase 12
involved_in
ISO IEA
(PMID:29101312) GO_REF:0000107
RGD Ensembl
PMID:29101312
GO_REF:0000107
NCBI chr 8:12,866,652...12,876,554
Ensembl chr 8:4,581,785...4,599,611
G
Gns
glucosamine (N-acetyl)-6-sulfatase
involved_in
ISO
(PMID:15595925) (PMID:33320673)
RGD
PMID:15595925 PMID:33320673
NCBI chr 7:56,889,148...56,923,173
Ensembl chr 7:56,889,232...56,923,151
G
Gpc1
glypican 1
involved_in
ISO ISS IEA
(PMID:12732622) GO_REF:0000024 GO_REF:0000107
RGD UniProt Ensembl
PMID:12732622
GO_REF:0000024 GO_REF:0000107
NCBI chr 9:100,843,645...100,871,458
Ensembl chr 9:93,396,234...93,424,047
G
Gusb
glucuronidase, beta
involved_in
ISO
MGI:1856041 (PMID:11273777), (PMID:23897660)
RGD
PMID:11273777 PMID:23897660
NCBI chr12:32,337,281...32,350,838
Ensembl chr12:26,697,951...26,726,905
G
Hgsnat
heparan-alpha-glucosaminide N-acetyltransferase
involved_in
ISO
UniProtKB:Q68CP4 (PMID:16960811), (PMID:27491071)
RGD
PMID:16960811 PMID:27491071
NCBI chr16:66,105,233...66,137,444
Ensembl chr16:66,105,181...66,136,138
G
Hpse
heparanase
involved_in
ISS ISO IEA
GO_REF:0000024 (PMID:12460766) (PMID:12213822) GO_REF:0000107
UniProt RGD Ensembl
PMID:12213822 PMID:12460766
GO_REF:0000024 GO_REF:0000107
NCBI chr14:9,200,971...9,241,377
Ensembl chr14:8,896,593...8,937,010
G
Ids
iduronate 2-sulfatase
involved_in
ISO
MGI:3625122 (PMID:17876721)
RGD
PMID:17876721
NCBI chr X:154,070,781...154,093,681
Ensembl chr X:149,025,976...149,046,663
G
Idua
alpha-L-iduronidase
involved_in
ISO
MGI:2176236|MGI:2651471 (PMID:15979918), (PMID:25854773)
RGD
PMID:15979918 PMID:25854773
NCBI chr14:1,031,588...1,059,494
Ensembl chr14:1,032,171...1,046,522
G
Naglu
N-acetyl-alpha-glucosaminidase
involved_in
ISO
MGI:1934018 (PMID:10588735)
RGD
PMID:10588735
NCBI chr10:86,501,864...86,509,333
Ensembl chr10:86,001,566...86,008,972
G
Sgsh
N-sulfoglucosamine sulfohydrolase
involved_in
ISO IBA
(PMID:15146460) GO_REF:0000033 MGI:1856041|MGI:2151181 (PMID:10561464), (PMID:11273777)
RGD GO_Central
PMID:10561464 PMID:11273777 PMID:15146460
GO_REF:0000033
NCBI chr10:104,596,810...104,613,510
Ensembl chr10:104,598,112...104,613,486
G
Idua
alpha-L-iduronidase
acts_upstream_of_or_within
ISO
(PMID:21873421) MGI:2176236|MGI:4415188 (PMID:19751987), (PMID:19834056), (PMID:21873421)
RGD
PMID:19751987 PMID:19834056 PMID:21873421
NCBI chr14:1,031,588...1,059,494
Ensembl chr14:1,032,171...1,046,522
G
Glb1
galactosidase, beta 1
involved_in
ISO
(PMID:31720227)
RGD
PMID:31720227
NCBI chr 8:122,963,718...123,036,326
Ensembl chr 8:114,085,508...114,158,127
G
Gns
glucosamine (N-acetyl)-6-sulfatase
IDA
RGD
PMID:3161730
RGD:1600571
NCBI chr 7:56,889,148...56,923,173
Ensembl chr 7:56,889,232...56,923,151
G
Edem1
ER degradation enhancing alpha-mannosidase like protein 1
involved_in
ISO
(PMID:25092655)
RGD
PMID:25092655
NCBI chr 4:141,797,631...141,829,717
Ensembl chr 4:141,797,701...141,829,717
G
Edem2
ER degradation enhancing alpha-mannosidase like protein 2
involved_in
ISO
(PMID:25092655)
RGD
PMID:25092655
NCBI chr 3:144,201,604...144,227,423
Ensembl chr 3:144,201,605...144,227,485
G
Edem3
ER degradation enhancing alpha-mannosidase like protein 3
involved_in
ISO IBA
(PMID:25092655) GO_REF:0000033 (PMID:16431915)
RGD GO_Central
PMID:16431915 PMID:25092655
GO_REF:0000033
NCBI chr13:63,858,282...63,920,538
Ensembl chr13:63,858,716...63,920,523
G
Man1b1
mannosidase, alpha, class 1B, member 1
involved_in
ISO
(PMID:10521544), (PMID:18003979)
RGD
PMID:10521544 PMID:18003979
NCBI chr 3:28,539,778...28,563,155
Ensembl chr 3:8,143,381...8,165,006
G
Man1a1
mannosidase, alpha, class 1A, member 1
involved_in
ISO
(PMID:27108681)
RGD
PMID:27108681
NCBI chr20:33,745,158...33,928,584
Ensembl chr20:33,202,517...33,385,824
G
Cst3
cystatin C
involved_in
ISO
(PMID:10545518)
RGD
PMID:10545518
NCBI chr 3:156,790,061...156,794,116
Ensembl chr 3:136,336,920...136,340,822
G
Adamts12
ADAM metallopeptidase with thrombospondin type 1 motif, 12
involved_in
ISO
(PMID:17895370)
RGD
PMID:17895370
NCBI chr 2:61,759,975...62,054,716
Ensembl chr 2:60,032,873...60,327,629
G
Btk
Bruton tyrosine kinase
IMP
RGD
PMID:32083858
RGD:151665122
NCBI chr X:102,016,070...102,055,448
Ensembl chr X:97,722,802...97,761,853
G
Edem3
ER degradation enhancing alpha-mannosidase like protein 3
involved_in
IBA
GO_REF:0000033
GO_Central
GO_REF:0000033
NCBI chr13:63,858,282...63,920,538
Ensembl chr13:63,858,716...63,920,523
Term paths to the root one shortest all shortest one longest all longest one shortest and longest all