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ONTOLOGY REPORT - ANNOTATIONS

Term:translational elongation
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Accession:GO:0006414 term browser browse the term
Definition:The successive addition of amino acid residues to a nascent polypeptide chain during protein biosynthesis.
Synonyms:exact_synonym: translation elongation
 broad_synonym: protein synthesis elongation
 alt_id: GO:0006442;   GO:0006455
 xref: Reactome:R-HSA-156842 "Eukaryotic Translation Elongation"


show annotations for term's descendants           Sort by:
translational elongation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G AABR07006688.2 involved_in IBA
IEA		 GO_REF:0000033
GO_REF:0000043
GO_REF:0000002		 GO_Central
UniProt
InterPro		 GO_REF:0000002 GO_REF:0000033 GO_REF:0000043 Ensembl chr 1:227,796,499...227,800,519 JBrowse link
G AABR07021465.2 involved_in IEA GO_REF:0000043
GO_REF:0000002		 UniProt
InterPro		 GO_REF:0000002 GO_REF:0000043 Ensembl chr13:68,389,916...68,391,901 JBrowse link
G Abtb1 ankyrin repeat and BTB domain containing 1 involved_in IEA GO_REF:0000043 UniProt GO_REF:0000043 NCBI chr 4:121,299,302...121,305,667
Ensembl chr 4:121,299,304...121,305,620 		JBrowse link
G Eef1a1 eukaryotic translation elongation factor 1 alpha 1 involved_in
acts_upstream_of_or_within		 ISS
ISO
IBA
IEA		 GO_REF:0000024
(PMID:26593721), (PMID:26651998), (PMID:36264623), (PMID:36638793)
GO_REF:0000033
GO_REF:0000043
GO_REF:0000107
GO_REF:0000002		 UniProt
RGD
GO_Central
Ensembl
InterPro		 PMID:26593721 PMID:26651998 PMID:36264623 PMID:36638793 GO_REF:0000002 GO_REF:0000024 GO_REF:0000033 GO_REF:0000043 GO_REF:0000107 NCBI chr 8:88,221,839...88,225,688
Ensembl chr 8:79,341,557...79,344,839 		JBrowse link
G Eef1a1l1 eukaryotic translation elongation factor 1 alpha 1 like 1 involved_in IBA
IEA		 GO_REF:0000033
GO_REF:0000002
GO_REF:0000043		 GO_Central
InterPro
UniProt		 GO_REF:0000002 GO_REF:0000033 GO_REF:0000043 NCBI chr  X:148,480,780...148,482,536
Ensembl chr  X:148,480,790...148,482,536
Ensembl chr  X:148,480,790...148,482,536 		JBrowse link
G Eef1a1l2 eukaryotic translation elongation factor 1 alpha 1 like 2 involved_in IBA
IEA		 GO_REF:0000033
GO_REF:0000043
GO_REF:0000002		 GO_Central
UniProt
InterPro		 GO_REF:0000002 GO_REF:0000033 GO_REF:0000043 NCBI chr 3:143,138,360...143,139,773
Ensembl chr 3:143,138,640...143,140,802 		JBrowse link
G Eef1a2 eukaryotic translation elongation factor 1 alpha 2 involved_in
acts_upstream_of_or_within		 IBA
ISO
ISS
IEA		 GO_REF:0000033
(PMID:9588196)
GO_REF:0000024
GO_REF:0000043
GO_REF:0000002		 GO_Central
RGD
UniProt
InterPro		 PMID:9588196 GO_REF:0000002 GO_REF:0000024 GO_REF:0000033 GO_REF:0000043 NCBI chr 3:188,643,455...188,652,633
Ensembl chr 3:168,195,357...168,275,071 		JBrowse link
G Eef1b2 eukaryotic translation elongation factor 1 beta 2 involved_in IEA GO_REF:0000043
GO_REF:0000002		 UniProt
InterPro		 GO_REF:0000002 GO_REF:0000043 NCBI chr 9:64,580,163...64,582,737
Ensembl chr 9:64,579,893...64,582,737 		JBrowse link
G Eef1d eukaryotic translation elongation factor 1 delta involved_in IEA
IBA		 GO_REF:0000043
GO_REF:0000002
GO_REF:0000033		 UniProt
InterPro
GO_Central		 GO_REF:0000002 GO_REF:0000033 GO_REF:0000043 NCBI chr 7:107,581,930...107,596,735
Ensembl chr 7:107,581,930...107,608,799 		JBrowse link
G Eef1g eukaryotic translation elongation factor 1 gamma involved_in IEA
IBA		 GO_REF:0000043
GO_REF:0000002
GO_REF:0000033		 UniProt
InterPro
GO_Central		 GO_REF:0000002 GO_REF:0000033 GO_REF:0000043 NCBI chr 1:215,289,815...215,300,421
Ensembl chr 1:205,860,698...205,872,382 		JBrowse link
G Eef2 eukaryotic translation elongation factor 2 involved_in
acts_upstream_of_or_within		 TAS
ISO
ISS
IEA
IBA		 (PMID:26593721)
GO_REF:0000024
GO_REF:0000107
GO_REF:0000033
(PMID:22157746)
GO_REF:0000043		 RGD
UniProt
Ensembl
GO_Central		 PMID:22157746 PMID:26593721 PMID:11849993 GO_REF:0000024 GO_REF:0000033 GO_REF:0000043 GO_REF:0000107, RGD:728809 NCBI chr 7:9,183,836...9,196,255
Ensembl chr 7:8,533,116...8,559,183 		JBrowse link
G Eif5a eukaryotic translation initiation factor 5A involved_in ISO
IEA
IBA
ISS		 (PMID:29712776)
GO_REF:0000043
GO_REF:0000033
GO_REF:0000024		 RGD
UniProt
GO_Central		 PMID:29712776 GO_REF:0000024 GO_REF:0000033 GO_REF:0000043 NCBI chr10:55,138,821...55,143,272
Ensembl chr10:54,640,024...54,644,656 		JBrowse link
G Eif5a2 eukaryotic translation initiation factor 5A2 involved_in IBA
IEA		 GO_REF:0000033
GO_REF:0000043		 GO_Central
UniProt		 GO_REF:0000033 GO_REF:0000043 NCBI chr 2:113,656,748...113,674,598
Ensembl chr 2:111,729,323...111,746,087 		JBrowse link
G ENSRNOG00000062700 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 Ensembl chr13:84,137,381...84,139,074 JBrowse link
G ENSRNOG00000062726 involved_in IBA
IEA		 GO_REF:0000033
GO_REF:0000043		 GO_Central
UniProt		 GO_REF:0000033 GO_REF:0000043 Ensembl chr 3:110,340,901...110,343,367 JBrowse link
G ENSRNOG00000064861 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 Ensembl chr 2:86,599,190...86,599,646 JBrowse link
G ENSRNOG00000065253 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 Ensembl chr 5:166,264,345...166,266,212 JBrowse link
G ENSRNOG00000066539 involved_in IEA GO_REF:0000002 InterPro GO_REF:0000002 Ensembl chr 4:166,702,874...166,703,965 JBrowse link
G ENSRNOG00000068012 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 Ensembl chr10:12,398,706...12,399,340 JBrowse link
G ENSRNOG00000070167 involved_in IEA GO_REF:0000108 GOC GO_REF:0000108 Ensembl chr20:31,012,060...31,012,587 JBrowse link
G Gfm1 G elongation factor, mitochondrial 1 involved_in IEA GO_REF:0000043
GO_REF:0000002
GO_REF:0000041		 UniProt
InterPro		 GO_REF:0000002 GO_REF:0000041 GO_REF:0000043 NCBI chr 2:151,700,573...151,745,477
Ensembl chr 2:151,700,564...151,745,471 		JBrowse link
G Gtpbp1 GTP binding protein 1 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr 7:111,248,254...111,272,705
Ensembl chr 7:111,248,254...111,272,705 		JBrowse link
G Gtpbp2 GTP binding protein 2 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr 9:22,311,532...22,321,405
Ensembl chr 9:14,813,964...14,823,241 		JBrowse link
G Hbs1l HBS1-like translational GTPase involved_in IEA GO_REF:0000043 UniProt GO_REF:0000043 NCBI chr 1:17,912,139...17,989,651
Ensembl chr 1:16,092,547...16,170,074 		JBrowse link
G LOC100360522 ribosomal protein P1-like involved_in IEA GO_REF:0000002 InterPro GO_REF:0000002 NCBI chr17:8,436,843...8,437,954
Ensembl chr17:8,431,465...8,435,348
Ensembl chr 8:8,431,465...8,435,348 		JBrowse link
G mt-Th mitochondrially encoded tRNA histidine TAS RGD PMID:2504926 RGD:631900 NCBI chr MT:11,538...11,605
NCBI chr MT:11,538...11,605
NCBI chr MT:11,538...11,605
NCBI chr MT:11,538...11,605 		JBrowse link
G Pycr3 pyrroline-5-carboxylate reductase 3 involved_in IEA GO_REF:0000043
GO_REF:0000002		 UniProt
InterPro		 GO_REF:0000002 GO_REF:0000043 NCBI chr 7:107,603,543...107,608,831
Ensembl chr 7:107,581,930...107,608,799 		JBrowse link
G Rplp1 ribosomal protein lateral stalk subunit P1 involved_in IEA GO_REF:0000002 InterPro GO_REF:0000002 NCBI chr 8:71,289,539...71,290,872
Ensembl chr 8:62,393,177...62,395,339 		JBrowse link
G Rplp1l1 ribosomal protein lateral stalk subunit P1 like 1 involved_in IEA GO_REF:0000002 InterPro GO_REF:0000002 NCBI chr 7:14,534,901...14,536,014
Ensembl chr 7:14,535,632...14,535,973 		JBrowse link
G Rplp2 ribosomal protein lateral stalk subunit P2 involved_in IEA GO_REF:0000002 InterPro GO_REF:0000002 NCBI chr 1:205,975,598...205,978,192
Ensembl chr 1:196,546,352...196,548,645 		JBrowse link
G Rplp2l1 ribosomal protein lateral stalk subunit P2 like 1 involved_in IEA GO_REF:0000002 InterPro GO_REF:0000002 NCBI chr 5:12,551,287...12,552,204
Ensembl chr 5:12,551,860...12,552,204 		JBrowse link
G Rplp2l2 ribosomal protein lateral stalk subunit P2 like 2 involved_in IEA GO_REF:0000002 InterPro GO_REF:0000002 NCBI chr15:67,638,365...67,638,804
Ensembl chr15:67,638,364...67,638,823 		JBrowse link
G Rplp2l3 ribosomal protein lateral stalk subunit P2 like 3 involved_in IEA GO_REF:0000002 InterPro GO_REF:0000002 NCBI chr14:42,745,280...42,745,734
Ensembl chr14:42,745,272...42,745,703 		JBrowse link
G Tsfm Ts translation elongation factor, mitochondrial involved_in IEA GO_REF:0000104
GO_REF:0000043
GO_REF:0000002		 UniProt
InterPro		 GO_REF:0000002 GO_REF:0000043 GO_REF:0000104 NCBI chr 7:64,714,330...64,750,106
Ensembl chr 7:62,845,488...62,864,769 		JBrowse link
G Tufm Tu translation elongation factor, mitochondrial involved_in ISO
IEA		 (PMID:9332382)
GO_REF:0000002
GO_REF:0000107
GO_REF:0000043		 RGD
InterPro
Ensembl
UniProt		 PMID:9332382 GO_REF:0000002 GO_REF:0000043 GO_REF:0000107 NCBI chr 1:181,073,788...181,077,395
Ensembl chr 1:181,073,788...181,077,395 		JBrowse link
CAT tailing term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G AABR07064719.2 involved_in IEA GO_REF:0000107 Ensembl GO_REF:0000107
G Nemf nuclear export mediator factor involved_in ISO
IEA		 (PMID:33406423), (PMID:33909987)
GO_REF:0000107
(PMID:33909987)		 RGD
Ensembl		 PMID:33406423 PMID:33909987 GO_REF:0000107 NCBI chr 6:93,527,690...93,571,863
Ensembl chr 6:87,791,656...87,835,841 		JBrowse link
cytoplasmic translational elongation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ENSRNOG00000066539 involved_in IEA GO_REF:0000002 InterPro GO_REF:0000002 Ensembl chr 4:166,702,874...166,703,965 JBrowse link
G Rplp2 ribosomal protein lateral stalk subunit P2 involved_in IEA GO_REF:0000002 InterPro GO_REF:0000002 NCBI chr 1:205,975,598...205,978,192
Ensembl chr 1:196,546,352...196,548,645 		JBrowse link
G Rplp2l1 ribosomal protein lateral stalk subunit P2 like 1 involved_in IEA GO_REF:0000002 InterPro GO_REF:0000002 NCBI chr 5:12,551,287...12,552,204
Ensembl chr 5:12,551,860...12,552,204 		JBrowse link
G Rplp2l2 ribosomal protein lateral stalk subunit P2 like 2 involved_in IEA GO_REF:0000002 InterPro GO_REF:0000002 NCBI chr15:67,638,365...67,638,804
Ensembl chr15:67,638,364...67,638,823 		JBrowse link
G Rplp2l3 ribosomal protein lateral stalk subunit P2 like 3 involved_in IEA GO_REF:0000002 InterPro GO_REF:0000002 NCBI chr14:42,745,280...42,745,734
Ensembl chr14:42,745,272...42,745,703 		JBrowse link
mitochondrial translational elongation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Gfm1 G elongation factor, mitochondrial 1 involved_in ISO
IEA
IBA
ISS		 (PMID:19716793)
GO_REF:0000107
GO_REF:0000033
GO_REF:0000104
GO_REF:0000024		 RGD
Ensembl
GO_Central
UniProt		 PMID:19716793 GO_REF:0000024 GO_REF:0000033 GO_REF:0000104 GO_REF:0000107 NCBI chr 2:151,700,573...151,745,477
Ensembl chr 2:151,700,564...151,745,471 		JBrowse link
G Gfm2 GTP dependent ribosome recycling factor mitochondrial 2 NOT|involved_in ISO (PMID:19716793) RGD PMID:19716793 NCBI chr 2:30,184,063...30,222,811
Ensembl chr 2:28,449,517...28,488,197 		JBrowse link
G Mrpl44 mitochondrial ribosomal protein L44 involved_in ISO
IEA		 (PMID:23315540)
GO_REF:0000107		 RGD
Ensembl		 PMID:23315540 GO_REF:0000107 NCBI chr 9:88,555,050...88,560,101
Ensembl chr 9:81,106,655...81,112,812 		JBrowse link
G mt-Tp mitochondrially encoded tRNA proline IDA RGD PMID:424302 RGD:2317000 NCBI chr MT:15,348...15,415
NCBI chr MT:15,348...15,415
NCBI chr MT:15,348...15,415
NCBI chr MT:15,348...15,415 		JBrowse link
G Tsfm Ts translation elongation factor, mitochondrial involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr 7:64,714,330...64,750,106
Ensembl chr 7:62,845,488...62,864,769 		JBrowse link
G Tufm Tu translation elongation factor, mitochondrial involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr 1:181,073,788...181,077,395
Ensembl chr 1:181,073,788...181,077,395 		JBrowse link
negative regulation of cytoplasmic translational elongation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Cpeb2 cytoplasmic polyadenylation element binding protein 2 involved_in IDA PMID:22157746 UniProt PMID:22157746 RGD:8553654 NCBI chr14:71,999,958...72,056,012
Ensembl chr14:67,787,507...67,840,743 		JBrowse link
G Cpeb3 cytoplasmic polyadenylation element binding protein 3 involved_in ISO (PMID:22157746) RGD PMID:22157746 NCBI chr 1:244,161,690...244,343,765
Ensembl chr 1:234,751,733...234,931,560 		JBrowse link
negative regulation of selenocysteine incorporation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Eif4a3 eukaryotic translation initiation factor 4A3 IDA RGD PMID:21685449 PMID:19716792 RGD:10044260, RGD:10045552 NCBI chr10:105,047,567...105,057,561
Ensembl chr10:104,549,038...104,559,057 		JBrowse link
negative regulation of translational elongation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Cpeb2 cytoplasmic polyadenylation element binding protein 2 acts_upstream_of_or_within ISO MGI:95288 (PMID:22157746) RGD PMID:22157746 NCBI chr14:71,999,958...72,056,012
Ensembl chr14:67,787,507...67,840,743 		JBrowse link
G Srp9 signal recognition particle 9 involved_in IEA GO_REF:0000002 InterPro GO_REF:0000002 NCBI chr13:96,364,253...96,372,393
Ensembl chr13:93,832,580...93,840,720 		JBrowse link
negative regulation of translational frameshifting term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Rack1 receptor for activated C kinase 1 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr10:33,668,560...33,676,031
Ensembl chr10:33,169,169...33,174,975 		JBrowse link
G Shfl shiftless antiviral inhibitor of ribosomal frameshifting involved_in ISO
ISS
IEA		 (PMID:30682371)
GO_REF:0000024
GO_REF:0000107		 RGD
UniProt
Ensembl		 PMID:30682371 GO_REF:0000024 GO_REF:0000107 NCBI chr 8:27,683,560...27,690,269
Ensembl chr 8:19,408,333...19,413,971 		JBrowse link
positive regulation of cytoplasmic translational elongation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Smyd5 SMYD family member 5 involved_in ISO
IEA		 (PMID:39048817), (PMID:39103523)
GO_REF:0000107		 RGD
Ensembl		 PMID:39048817 PMID:39103523 GO_REF:0000107 NCBI chr 4:119,527,115...119,541,580
Ensembl chr 4:117,969,626...117,984,347 		JBrowse link
positive regulation of selenocysteine incorporation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Rpl30 ribosomal protein L30 IDA RGD PMID:15821744 RGD:11038818 NCBI chr 7:67,533,420...67,536,555
Ensembl chr 7:65,645,991...65,651,363
Ensembl chr10:65,645,991...65,651,363
Ensembl chr 1:65,645,991...65,651,363 		JBrowse link
G Secisbp2 SECIS binding protein 2 IDA RGD PMID:15821744 RGD:11038818 NCBI chr17:13,690,263...13,721,303
Ensembl chr17:13,538,513...13,569,523 		JBrowse link
positive regulation of translational elongation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Eif5a eukaryotic translation initiation factor 5A involved_in IEA GO_REF:0000104
GO_REF:0000002		 UniProt
InterPro		 GO_REF:0000002 GO_REF:0000104 NCBI chr10:55,138,821...55,143,272
Ensembl chr10:54,640,024...54,644,656 		JBrowse link
G Eif5a2 eukaryotic translation initiation factor 5A2 involved_in IEA GO_REF:0000104
GO_REF:0000002		 UniProt
InterPro		 GO_REF:0000002 GO_REF:0000104 NCBI chr 2:113,656,748...113,674,598
Ensembl chr 2:111,729,323...111,746,087 		JBrowse link
G ENSRNOG00000064861 involved_in IEA GO_REF:0000002 InterPro GO_REF:0000002 Ensembl chr 2:86,599,190...86,599,646 JBrowse link
G ENSRNOG00000068012 involved_in IEA GO_REF:0000104
GO_REF:0000002		 UniProt
InterPro		 GO_REF:0000002 GO_REF:0000104 Ensembl chr10:12,398,706...12,399,340 JBrowse link
G Rpl12 ribosomal protein L12 IDA RGD PMID:11729183 RGD:11035234 NCBI chr 3:36,661,940...36,664,314
Ensembl chr 3:16,264,251...16,266,642 		JBrowse link
G Usp16 ubiquitin specific peptidase 16 involved_in ISS
IEA
ISO		 GO_REF:0000024
GO_REF:0000107
(PMID:20550933)		 UniProt
Ensembl
RGD		 PMID:20550933 GO_REF:0000024 GO_REF:0000107 NCBI chr11:40,166,651...40,196,792
Ensembl chr11:26,681,414...26,710,539 		JBrowse link
protein-RNA covalent cross-linking repair term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Gcn1 GCN1 activator of EIF2AK4 involved_in ISO
IEA		 (PMID:37951215)
GO_REF:0000107		 RGD
Ensembl		 PMID:37951215 GO_REF:0000107 NCBI chr12:46,652,273...46,715,119
Ensembl chr12:40,991,512...41,052,555 		JBrowse link
G Rnf14 ring finger protein 14 involved_in ISO
IEA		 (PMID:37951215), (PMID:37951216)
GO_REF:0000107		 RGD
Ensembl		 PMID:37951215 PMID:37951216 GO_REF:0000107 NCBI chr18:30,381,072...30,406,859
Ensembl chr18:30,131,691...30,155,685 		JBrowse link
G Rnf25 ring finger protein 25 involved_in ISO (PMID:37951215) RGD PMID:37951215 NCBI chr 9:83,619,148...83,626,020
Ensembl chr 9:76,170,037...76,176,849 		JBrowse link
regulation of cytoplasmic translational fidelity term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Aars1 alanyl-tRNA synthetase 1 involved_in ISO
IEA		 (PMID:25422440)
GO_REF:0000107		 RGD
Ensembl		 PMID:25422440 GO_REF:0000107 NCBI chr19:55,906,694...55,930,499
Ensembl chr19:38,999,163...39,021,147 		JBrowse link
regulation of translational elongation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Alkbh1 alkB homolog 1, histone H2A dioxygenase involved_in ISO
IEA		 (PMID:27745969)
GO_REF:0000107		 RGD
Ensembl		 PMID:27745969 GO_REF:0000107 NCBI chr 6:112,799,234...112,819,708
Ensembl chr 6:107,068,475...107,088,759 		JBrowse link
G Mettl18 methyltransferase 18, RPL3 N3(tau)-histidine involved_in ISS
ISO		 GO_REF:0000024
(PMID:35674491)		 UniProt
RGD		 PMID:35674491 GO_REF:0000024 NCBI chr13:78,879,053...78,881,226
Ensembl chr13:76,345,957...76,348,836 		JBrowse link
rescue of stalled ribosome term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G AABR07064719.2 involved_in IBA
IEA		 GO_REF:0000033
GO_REF:0000107		 GO_Central
Ensembl		 GO_REF:0000033 GO_REF:0000107
G Abce1 ATP binding cassette subfamily E member 1 involved_in ISO
IEA		 (PMID:21448132)
GO_REF:0000107		 RGD
Ensembl		 PMID:21448132 GO_REF:0000107 NCBI chr19:45,109,880...45,134,819
Ensembl chr19:28,205,555...28,230,489 		JBrowse link
G Ankzf1 ankyrin repeat and zinc finger peptidyl tRNA hydrolase 1 involved_in ISO
IEA
ISS		 (PMID:29632312), (PMID:30244831), (PMID:31011209), (PMID:32075755)
GO_REF:0000107
GO_REF:0000024		 RGD
Ensembl
UniProt		 PMID:29632312 PMID:30244831 PMID:31011209 PMID:32075755 GO_REF:0000024 GO_REF:0000107 NCBI chr 9:84,136,862...84,143,830
Ensembl chr 9:76,688,194...76,696,469 		JBrowse link
G Ascc2 activating signal cointegrator 1 complex subunit 2 involved_in ISO
IEA		 (PMID:32099016), (PMID:32579943), (PMID:36302773)
GO_REF:0000107		 RGD
Ensembl		 PMID:32099016 PMID:32579943 PMID:36302773 GO_REF:0000107 NCBI chr14:83,726,975...83,771,312
Ensembl chr14:79,503,517...79,545,494 		JBrowse link
G Ascc3 activating signal cointegrator 1 complex subunit 3 involved_in ISS
ISO		 GO_REF:0000024
(PMID:32099016), (PMID:32579943), (PMID:36302773)		 UniProt
RGD		 PMID:32099016 PMID:32579943 PMID:36302773 GO_REF:0000024 NCBI chr20:55,089,430...55,372,374
Ensembl chr20:53,510,184...53,790,165 		JBrowse link
G Cdk5rap3 CDK5 regulatory subunit associated protein 3 involved_in ISO
IEA		 (PMID:32851973), (PMID:37595036), (PMID:38383785), (PMID:38383789)
GO_REF:0000107		 RGD
Ensembl		 PMID:32851973 PMID:37595036 PMID:38383785 PMID:38383789 GO_REF:0000107 NCBI chr10:82,390,845...82,402,814
Ensembl chr10:81,894,393...81,903,590 		JBrowse link
G Ddrgk1 DDRGK domain containing 1 involved_in ISO
IEA		 (PMID:37595036), (PMID:38383785), (PMID:38383789)
GO_REF:0000107		 RGD
Ensembl		 PMID:37595036 PMID:38383785 PMID:38383789 GO_REF:0000107 NCBI chr 3:138,315,006...138,336,691
Ensembl chr 3:117,861,653...117,882,680 		JBrowse link
G Eif4e2 eukaryotic translation initiation factor 4E family member 2 involved_in ISO
IEA		 (PMID:32726578)
GO_REF:0000107		 RGD
Ensembl		 PMID:32726578 GO_REF:0000107 NCBI chr 9:95,333,439...95,362,366
Ensembl chr 9:87,878,085...87,914,482 		JBrowse link
G Elac1 elaC ribonuclease Z 1 involved_in ISO
IEA		 (PMID:32075755)
GO_REF:0000107		 RGD
Ensembl		 PMID:32075755 GO_REF:0000107 NCBI chr18:69,596,475...69,617,206
Ensembl chr18:67,323,583...67,340,936 		JBrowse link
G Gcn1 GCN1 activator of EIF2AK4 involved_in ISO
IEA		 (PMID:36638793), (PMID:37651229), (PMID:37951215), (PMID:37951216)
GO_REF:0000107		 RGD
Ensembl		 PMID:36638793 PMID:37651229 PMID:37951215 PMID:37951216 GO_REF:0000107 NCBI chr12:46,652,273...46,715,119
Ensembl chr12:40,991,512...41,052,555 		JBrowse link
G Gigyf2 GRB10 interacting GYF protein 2 involved_in ISO
IEA		 (PMID:32726578)
GO_REF:0000107		 RGD
Ensembl		 PMID:32726578 GO_REF:0000107 NCBI chr 9:95,449,143...95,574,927
Ensembl chr 9:88,001,301...88,125,715 		JBrowse link
G Gtpbp2 GTP binding protein 2 acts_upstream_of_or_within ISO
IEA		 (PMID:25061210)
GO_REF:0000107		 RGD
Ensembl		 PMID:25061210 GO_REF:0000107 NCBI chr 9:22,311,532...22,321,405
Ensembl chr 9:14,813,964...14,823,241 		JBrowse link
G Hbs1l HBS1-like translational GTPase involved_in ISO (PMID:21448132), (PMID:27863242) RGD PMID:21448132 PMID:27863242 NCBI chr 1:17,912,139...17,989,651
Ensembl chr 1:16,092,547...16,170,074 		JBrowse link
G Klhdc10 kelch domain containing 10 involved_in ISO
IEA
ISS		 (PMID:33909987)
GO_REF:0000107
GO_REF:0000024		 RGD
Ensembl
UniProt		 PMID:33909987 GO_REF:0000024 GO_REF:0000107 NCBI chr 4:59,988,710...60,046,518
Ensembl chr 4:59,021,310...59,074,941 		JBrowse link
G Ltn1 listerin E3 ubiquitin protein ligase 1 involved_in ISO
IEA
IBA		 (PMID:25578875)
GO_REF:0000104
GO_REF:0000107
GO_REF:0000033		 RGD
UniProt
Ensembl
GO_Central		 PMID:25578875 GO_REF:0000033 GO_REF:0000104 GO_REF:0000107 NCBI chr11:40,090,169...40,147,159
Ensembl chr11:26,603,903...26,660,886 		JBrowse link
G Mrpl58 mitochondrial ribosomal protein L58 involved_in ISO
IEA		 (PMID:33878294)
GO_REF:0000107		 RGD
Ensembl		 PMID:33878294 GO_REF:0000107 NCBI chr10:101,145,342...101,151,838
Ensembl chr10:100,646,216...100,652,871 		JBrowse link
G Mtres1 mitochondrial transcription rescue factor 1 involved_in ISO
IEA		 (PMID:33243891)
GO_REF:0000107		 RGD
Ensembl		 PMID:33243891 GO_REF:0000107 NCBI chr20:48,604,479...48,622,364
Ensembl chr20:47,022,342...47,038,805 		JBrowse link
G Mtrfr mitochondrial translation release factor in rescue involved_in ISO
IEA		 (PMID:33243891)
GO_REF:0000107		 RGD
Ensembl		 PMID:33243891 GO_REF:0000107 NCBI chr12:37,922,532...37,936,219
Ensembl chr12:32,258,435...32,275,258 		JBrowse link
G Nemf nuclear export mediator factor involved_in ISO
IEA
IBA		 (PMID:25578875)
GO_REF:0000107
GO_REF:0000033		 RGD
Ensembl
GO_Central		 PMID:25578875 GO_REF:0000033 GO_REF:0000107 NCBI chr 6:93,527,690...93,571,863
Ensembl chr 6:87,791,656...87,835,841 		JBrowse link
G Pelo pelota mRNA surveillance and ribosome rescue factor involved_in ISO
IEA
ISS		 (PMID:21448132), (PMID:27863242)
GO_REF:0000107
GO_REF:0000024		 RGD
Ensembl
UniProt		 PMID:21448132 PMID:27863242 GO_REF:0000024 GO_REF:0000107 NCBI chr 2:48,530,902...48,532,670
Ensembl chr 2:46,797,853...46,799,746 		JBrowse link
G Ptrh1 peptidyl-tRNA hydrolase 1 homolog involved_in ISO
IEA		 (PMID:30244831)
GO_REF:0000107		 RGD
Ensembl		 PMID:30244831 GO_REF:0000107 NCBI chr 3:36,462,575...36,475,605
Ensembl chr 3:16,064,880...16,070,648 		JBrowse link
G Rack1 receptor for activated C kinase 1 involved_in ISO
ISS
IBA		 (PMID:28132843)
GO_REF:0000024
GO_REF:0000033		 RGD
UniProt
GO_Central		 PMID:28132843 GO_REF:0000024 GO_REF:0000033 NCBI chr10:33,668,560...33,676,031
Ensembl chr10:33,169,169...33,174,975 		JBrowse link
G Rchy1 ring finger and CHY zinc finger domain containing 1 involved_in ISO (PMID:33909987) RGD PMID:33909987 NCBI chr14:16,397,533...16,413,286
Ensembl chr14:16,113,224...16,129,167 		JBrowse link
G Rnf14 ring finger protein 14 involved_in ISO
IEA		 (PMID:27863242), (PMID:36638793), (PMID:37651229), (PMID:37951215), (PMID:37951216)
GO_REF:0000107		 RGD
Ensembl		 PMID:27863242 PMID:36638793 PMID:37651229 PMID:37951215 PMID:37951216 GO_REF:0000107 NCBI chr18:30,381,072...30,406,859
Ensembl chr18:30,131,691...30,155,685 		JBrowse link
G Rnf25 ring finger protein 25 involved_in ISO
IBA		 (PMID:27863242), (PMID:36638793), (PMID:37651229), (PMID:37951216)
GO_REF:0000033		 RGD
GO_Central		 PMID:27863242 PMID:36638793 PMID:37651229 PMID:37951216 GO_REF:0000033 NCBI chr 9:83,619,148...83,626,020
Ensembl chr 9:76,170,037...76,176,849 		JBrowse link
G Saysd1 SAYSVFN motif domain containing 1 involved_in ISO (PMID:36848233) RGD PMID:36848233 NCBI chr15:4,273,302...4,278,971 JBrowse link
G Skic2 SKI2 subunit of superkiller complex involved_in ISO (PMID:32006463) RGD PMID:32006463 NCBI chr20:3,987,130...3,997,887
Ensembl chr20:3,982,593...3,993,261 		JBrowse link
G Skic3 SKI3 subunit of superkiller complex involved_in ISO
IEA		 (PMID:32006463)
GO_REF:0000107		 RGD
Ensembl		 PMID:32006463 GO_REF:0000107 NCBI chr 2:7,363,417...7,526,351
Ensembl chr 2:5,631,635...5,751,626 		JBrowse link
G Skic8 SKI8 subunit of superkiller complex involved_in ISO
IEA
ISS		 (PMID:32006463)
GO_REF:0000107
GO_REF:0000024		 RGD
Ensembl
UniProt		 PMID:32006463 GO_REF:0000024 GO_REF:0000107 NCBI chr 8:63,999,669...64,016,959
Ensembl chr 8:55,103,545...55,120,813 		JBrowse link
G Tcf25 TCF25 ribosome quality control complex subunit involved_in ISO
IEA		 (PMID:30244831)
GO_REF:0000107		 RGD
Ensembl		 PMID:30244831 GO_REF:0000107 NCBI chr19:68,323,789...68,358,226
Ensembl chr19:51,415,543...51,449,723 		JBrowse link
G Trip4 thyroid hormone receptor interactor 4 involved_in ISO
IEA		 (PMID:32099016), (PMID:32579943), (PMID:36302773)
GO_REF:0000002		 RGD
InterPro		 PMID:32099016 PMID:32579943 PMID:36302773 GO_REF:0000002 NCBI chr 8:75,248,352...75,334,802
Ensembl chr 8:66,353,248...66,439,774 		JBrowse link
G Trnt1 tRNA nucleotidyl transferase 1 involved_in ISO (PMID:32075755) RGD PMID:32075755 NCBI chr 4:141,236,937...141,259,700
Ensembl chr 4:139,680,858...139,703,611 		JBrowse link
G Ufl1 Ufm1-specific ligase 1 involved_in ISO
IEA
ISS		 (PMID:37036982), (PMID:37595036), (PMID:38383785), (PMID:38383789)
GO_REF:0000107
GO_REF:0000024		 RGD
Ensembl
UniProt		 PMID:37036982 PMID:37595036 PMID:38383785 PMID:38383789 GO_REF:0000024 GO_REF:0000107 NCBI chr 5:43,759,271...43,791,682
Ensembl chr 5:38,962,171...38,995,199 		JBrowse link
G Ufsp2 UFM1-specific peptidase 2 involved_in ISO
IEA		 (PMID:38383785)
GO_REF:0000107		 RGD
Ensembl		 PMID:38383785 GO_REF:0000107 NCBI chr16:53,004,590...53,023,640
Ensembl chr16:46,272,016...46,291,059 		JBrowse link
G Usp10 ubiquitin specific peptidase 10 involved_in ISO
IEA
ISS		 (PMID:31981475), (PMID:34348161), (PMID:34469731)
GO_REF:0000107
GO_REF:0000024		 RGD
Ensembl
UniProt		 PMID:31981475 PMID:34348161 PMID:34469731 GO_REF:0000024 GO_REF:0000107 NCBI chr19:64,881,255...64,923,522
Ensembl chr19:47,972,611...48,014,897 		JBrowse link
G Zfp598 zinc finger protein 598 involved_in ISO
IEA
IBA		 (PMID:28065601), (PMID:28132843), (PMID:28685749), (PMID:30293783), (PMID:32099016), (PMID:32579943), (PMID:33581075), (PMID:36302773)
GO_REF:0000002
GO_REF:0000033		 RGD
InterPro
GO_Central		 PMID:28065601 PMID:28132843 PMID:28685749 PMID:30293783 PMID:32099016 More... GO_REF:0000002 GO_REF:0000033 NCBI chr10:14,198,763...14,210,773
Ensembl chr10:13,694,286...13,706,233 		JBrowse link
selenocysteine incorporation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Eefsec eukaryotic elongation factor, selenocysteine-tRNA-specific involved_in
acts_upstream_of_or_within		 ISO
IEA
IBA		 (PMID:27708257), (PMID:35709277)
GO_REF:0000107
GO_REF:0000033
MGI:1857940|MGI:2151801 (PMID:10970870), (PMID:10992298), (PMID:11265756), (PMID:11890935), (PMID:22992746)		 RGD
Ensembl
GO_Central		 PMID:10970870 PMID:10992298 PMID:11265756 PMID:11890935 PMID:22992746 More... GO_REF:0000033 GO_REF:0000107 NCBI chr 4:120,719,616...120,915,779
Ensembl chr 4:120,707,133...120,915,779 		JBrowse link
G Pstk phosphoseryl-tRNA kinase acts_upstream_of_or_within ISO
IEA		 (PMID:15317934)
GO_REF:0000107		 RGD
Ensembl		 PMID:15317934 GO_REF:0000107 NCBI chr 1:186,157,730...186,168,145
Ensembl chr 1:186,157,707...186,168,145 		JBrowse link
G Sars1 seryl-tRNA synthetase 1 involved_in ISS
ISO
IEA		 GO_REF:0000024
(PMID:34570399)
GO_REF:0000107		 UniProt
RGD
Ensembl		 PMID:34570399 GO_REF:0000024 GO_REF:0000107 NCBI chr 2:198,753,673...198,769,411
Ensembl chr 2:196,065,430...196,081,277 		JBrowse link
G Secisbp2 SECIS binding protein 2 acts_upstream_of_or_within
involved_in		 TAS
IEA
IBA
ISO
IDA		 GO_REF:0000107
GO_REF:0000033
MGI:2181426|MGI:4433050|MGI:5583885 (PMID:24274065), (PMID:24844465), (PMID:27956496)
(PMID:35709277)
PMID:10637234
PMID:10464275		 Ensembl
GO_Central
RGD		 PMID:24274065 PMID:24844465 PMID:27956496 PMID:35709277 PMID:11238886 More... GO_REF:0000033 GO_REF:0000107, RGD:628439, RGD:633967, RGD:401966875 NCBI chr17:13,690,263...13,721,303
Ensembl chr17:13,538,513...13,569,523 		JBrowse link
G Sepsecs Sep (O-phosphoserine) tRNA:Sec (selenocysteine) tRNA synthase involved_in ISO
IEA		 (PMID:16230358)
GO_REF:0000107		 RGD
Ensembl		 PMID:16230358 GO_REF:0000107 NCBI chr14:58,311,484...58,341,745
Ensembl chr14:58,311,499...58,341,740 		JBrowse link
G Trnau1ap tRNA selenocysteine 1 associated protein 1 involved_in ISS
ISO
IBA		 GO_REF:0000024
(PMID:16230358)
GO_REF:0000033		 HGNC-UCL
RGD
GO_Central		 PMID:16230358 GO_REF:0000024 GO_REF:0000033 NCBI chr 5:144,507,044...144,524,142
Ensembl chr 5:144,507,615...144,524,131 		JBrowse link
Term paths to the root
Path 1
Term Annotations click to browse term
  biological_process 20567
    cellular process 19557
      metabolic process 12206
        biosynthetic process 8676
          macromolecule biosynthetic process 7662
            translational elongation 90
              cytoplasmic translational elongation + 11
              mitochondrial translational elongation + 6
              negative regulation of translational elongation + 6
              positive regulation of translational elongation + 9
              regulation of translational elongation + 18
              rescue of stalled ribosome + 36
              trans-translation 0
              translational frameshifting + 2
              translational readthrough + 8
Path 2
Term Annotations click to browse term
  biological_process 20567
    cellular process 19557
      metabolic process 12206
        macromolecule metabolic process 10018
          macromolecule biosynthetic process 7662
            gene expression 7224
              translation 1179
                translational elongation 90
                  cytoplasmic translational elongation + 11
                  mitochondrial translational elongation + 6
                  negative regulation of translational elongation + 6
                  positive regulation of translational elongation + 9
                  regulation of translational elongation + 18
                  rescue of stalled ribosome + 36
                  trans-translation 0
                  translational frameshifting + 2
                  translational readthrough + 8
paths to the root