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ONTOLOGY REPORT - ANNOTATIONS

Term:DNA repair
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Accession:GO:0006281 term browser browse the term
Definition:The process of restoring DNA after damage. Genomes are subject to damage by chemical and physical agents in the environment (e.g. UV and ionizing radiations, chemical mutagens, fungal and bacterial toxins, etc.) and by free radicals or alkylating agents endogenously generated in metabolism. DNA is also damaged because of errors during its replication. A variety of different DNA repair pathways have been reported that include direct reversal, base excision repair, nucleotide excision repair, photoreactivation, bypass, double-strand break repair pathway, and mismatch repair pathway.
Synonyms:xref: Reactome:R-HSA-73894 "DNA Repair";   Wikipedia:DNA_repair


show annotations for term's descendants           Sort by:
DNA repair term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G AABR07031480.1 involved_in IEA GO_REF:0000043 UniProt GO_REF:0000043
G AABR07035218.1 involved_in IEA GO_REF:0000043 UniProt GO_REF:0000043 Ensembl chr12:5,901,586...5,978,565 JBrowse link
G Abraxas1 abraxas 1, BRCA1 A complex subunit involved_in IEA GO_REF:0000043 UniProt GO_REF:0000043 NCBI chr14:9,100,650...9,115,012
Ensembl chr14:8,796,266...8,810,622 		JBrowse link
G Adprs ADP-ribosylserine hydrolase involved_in ISO
IEA		 (PMID:30045870)
GO_REF:0000107		 RGD
Ensembl		 PMID:30045870 GO_REF:0000107 NCBI chr 5:143,898,542...143,903,816
Ensembl chr 5:138,614,022...138,619,296 		JBrowse link
G Alkbh1 alkB homolog 1, histone H2A dioxygenase involved_in ISO
IEA		 (PMID:19959401)
GO_REF:0000107
GO_REF:0000043		 RGD
Ensembl
UniProt		 PMID:19959401 GO_REF:0000043 GO_REF:0000107 NCBI chr 6:112,799,234...112,819,708
Ensembl chr 6:107,068,475...107,088,759 		JBrowse link
G Alkbh2 alkB homolog 2, alpha-ketoglutarate-dependent dioxygenase involved_in IEA GO_REF:0000002 InterPro GO_REF:0000002 NCBI chr12:42,494,187...42,500,929
Ensembl chr12:42,496,300...42,500,914 		JBrowse link
G Alkbh3 alkB homolog 3, alpha-ketoglutarate-dependent dioxygenase involved_in IBA
IEA		 GO_REF:0000033
GO_REF:0000002
GO_REF:0000043		 GO_Central
InterPro
UniProt		 GO_REF:0000002 GO_REF:0000033 GO_REF:0000043 NCBI chr 3:79,939,515...79,972,820
Ensembl chr 3:79,939,600...79,972,000 		JBrowse link
G Ankle1 ankyrin repeat and LEM domain containing 1 NOT|involved_in ISO (PMID:27010503) RGD PMID:27010503 NCBI chr16:18,109,865...18,116,999
Ensembl chr16:18,076,492...18,083,729 		JBrowse link
G Apex1 apurinic/apyrimidinic endodeoxyribonuclease 1 involved_in ISS
IEA
ISO		 GO_REF:0000024
GO_REF:0000107
GO_REF:0000002
GO_REF:0000043
(PMID:1627644), (PMID:9560228)		 UniProt
Ensembl
InterPro
RGD		 PMID:1627644 PMID:9560228 GO_REF:0000002 GO_REF:0000024 GO_REF:0000043 GO_REF:0000107 NCBI chr15:26,618,146...26,620,330
Ensembl chr15:24,144,362...24,146,785 		JBrowse link
G Apex2 apurinic/apyrimidinic endodeoxyribonuclease 2 involved_in IEA GO_REF:0000002
GO_REF:0000043		 InterPro
UniProt		 GO_REF:0000002 GO_REF:0000043 NCBI chr  X:22,914,943...22,937,713
Ensembl chr  X:19,487,419...19,508,439 		JBrowse link
G Apex2l1 APEX nuclease (apurinic/apyrimidinic endonuclease) 2-like 1 involved_in IEA GO_REF:0000002
GO_REF:0000043		 InterPro
UniProt		 GO_REF:0000002 GO_REF:0000043 NCBI chr14:67,166,252...67,168,138
Ensembl chr14:67,166,530...67,168,080 		JBrowse link
G Aplf aprataxin and PNKP like factor involved_in ISO
IEA		 (PMID:21211722), (PMID:30104678)
GO_REF:0000043		 RGD
UniProt		 PMID:21211722 PMID:30104678 GO_REF:0000043 NCBI chr 4:121,627,800...121,679,980
Ensembl chr 4:120,070,471...120,122,633 		JBrowse link
G Aptx aprataxin involved_in IEA GO_REF:0000043 UniProt GO_REF:0000043 NCBI chr 5:55,798,896...55,822,963
Ensembl chr 5:55,800,248...55,822,855 		JBrowse link
G Ascc3 activating signal cointegrator 1 complex subunit 3 involved_in IEA GO_REF:0000043 UniProt GO_REF:0000043 NCBI chr20:53,510,137...53,795,446
Ensembl chr20:53,510,184...53,790,165 		JBrowse link
G Asf1a anti-silencing function 1A histone chaperone acts_upstream_of_or_within ISO (PMID:11897662) RGD PMID:11897662 NCBI chr20:33,436,632...33,451,478
Ensembl chr20:32,893,573...32,908,808 		JBrowse link
G Atm ATM serine/threonine kinase acts_upstream_of_or_within
involved_in		 ISO
IEA		 MGI:1857132|MGI:2155399 (PMID:11679583), (PMID:15364958), (PMID:15542845)
GO_REF:0000002		 RGD
InterPro		 PMID:11679583 PMID:15364958 PMID:15542845 GO_REF:0000002 NCBI chr 8:62,724,939...62,829,040
Ensembl chr 8:53,831,093...53,932,437 		JBrowse link
G Atr ATR serine/threonine kinase acts_upstream_of_or_within
involved_in		 ISO
IEA
IBA		 (PMID:15364958)
GO_REF:0000043
GO_REF:0000033		 RGD
UniProt
GO_Central		 PMID:15364958 GO_REF:0000033 GO_REF:0000043 NCBI chr 8:105,306,299...105,403,742
Ensembl chr 8:96,426,724...96,524,136 		JBrowse link
G Atrip ATR interacting protein involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr 8:118,586,909...118,600,975
Ensembl chr 8:109,708,440...109,722,477 		JBrowse link
G Atrx ATRX, chromatin remodeler involved_in IEA GO_REF:0000043 UniProt GO_REF:0000043 NCBI chr  X:74,916,548...75,062,880
Ensembl chr  X:70,850,981...70,997,330 		JBrowse link
G Aunip aurora kinase A and ninein interacting protein involved_in IEA GO_REF:0000043 UniProt GO_REF:0000043 NCBI chr 5:152,006,021...152,018,614
Ensembl chr 5:146,722,337...146,736,501 		JBrowse link
G Babam1 BRISC and BRCA1 A complex member 1 involved_in IEA GO_REF:0000043 UniProt GO_REF:0000043 NCBI chr16:18,102,885...18,108,916
Ensembl chr16:18,068,884...18,074,923 		JBrowse link
G Babam2 BRISC and BRCA1 A complex member 2 involved_in IEA GO_REF:0000043 UniProt GO_REF:0000043 NCBI chr 6:30,089,065...30,467,508
Ensembl chr 6:24,369,022...24,833,951 		JBrowse link
G Bach1 BTB domain and CNC homolog 1 involved_in ISO (PMID:11301010) RGD PMID:11301010 NCBI chr11:26,939,429...26,974,876
Ensembl chr11:26,939,480...26,972,447 		JBrowse link
G Bard1 BRCA1 associated RING domain 1 involved_in IEA GO_REF:0000043 UniProt GO_REF:0000043 NCBI chr 9:80,069,960...80,144,167
Ensembl chr 9:72,623,155...72,694,265 		JBrowse link
G Blm BLM RecQ like helicase acts_upstream_of_or_within
involved_in		 ISO
IEA		 (PMID:15364958)
GO_REF:0000002		 RGD
InterPro		 PMID:15364958 GO_REF:0000002 NCBI chr 1:143,819,072...143,905,300
Ensembl chr 1:134,409,857...134,484,312 		JBrowse link
G Brca1 BRCA1, DNA repair associated involved_in IEA GO_REF:0000043
GO_REF:0000002		 UniProt
InterPro		 GO_REF:0000002 GO_REF:0000043 NCBI chr10:86,917,693...86,978,012
Ensembl chr10:86,418,000...86,477,304 		JBrowse link
G Brca2 BRCA2, DNA repair associated involved_in IEA GO_REF:0000043
GO_REF:0000002		 UniProt
InterPro		 GO_REF:0000002 GO_REF:0000043 NCBI chr12:4,895,092...4,939,340
Ensembl chr12:59,819...100,567 		JBrowse link
G Brcc3 BRCA1/BRCA2-containing complex subunit 3 involved_in IEA GO_REF:0000002
GO_REF:0000043		 InterPro
UniProt		 GO_REF:0000002 GO_REF:0000043 NCBI chr 9:2,073,927...2,076,469
Ensembl chr 9:1,986,575...1,991,080 		JBrowse link
G Brcc3dc BRCA1/BRCA2-containing complex, subunit 3, domain containing involved_in IEA GO_REF:0000002 InterPro GO_REF:0000002 NCBI chr 7:45,901,321...45,903,078
Ensembl chr 7:44,005,646...44,016,670 		JBrowse link
G Cdc5l cell division cycle 5-like involved_in IEA GO_REF:0000043 UniProt GO_REF:0000043 NCBI chr 9:23,062,397...23,100,901
Ensembl chr 9:15,564,767...15,603,450 		JBrowse link
G Cdk2 cyclin dependent kinase 2 involved_in IEA GO_REF:0000043 UniProt GO_REF:0000043 NCBI chr 7:1,714,392...1,721,964
Ensembl chr 7:1,129,811...1,137,403 		JBrowse link
G Cdk7 cyclin-dependent kinase 7 involved_in IEA GO_REF:0000043 UniProt GO_REF:0000043 NCBI chr 2:33,574,623...33,599,485
Ensembl chr 2:31,840,558...31,865,383 		JBrowse link
G Cdk9 cyclin-dependent kinase 9 involved_in IEA GO_REF:0000043 UniProt GO_REF:0000043 NCBI chr 3:36,394,168...36,399,016
Ensembl chr 3:15,996,468...16,002,410 		JBrowse link
G Cenps centromere protein S involved_in ISO (PMID:20347429) RGD PMID:20347429 NCBI chr 5:164,847,009...164,856,705 JBrowse link
G Chaf1a chromatin assembly factor 1 subunit A involved_in IEA GO_REF:0000043 UniProt GO_REF:0000043 NCBI chr 9:961,225...987,825
Ensembl chr 9:874,051...900,654 		JBrowse link
G Chd1l chromodomain helicase DNA binding protein 1-like involved_in IEA
ISO		 GO_REF:0000002
(PMID:34486521)		 InterPro
RGD		 PMID:34486521 GO_REF:0000002 NCBI chr 2:185,138,526...185,217,498
Ensembl chr 2:185,139,308...185,217,595 		JBrowse link
G Chek1 checkpoint kinase 1 involved_in
acts_upstream_of_or_within		 ISO
IEA		 (PMID:19716789)
GO_REF:0000043
(PMID:15364958)		 RGD
UniProt		 PMID:15364958 PMID:19716789 GO_REF:0000043 NCBI chr 8:44,609,417...44,629,867
Ensembl chr 8:36,420,569...36,441,009 		JBrowse link
G Chrna4 cholinergic receptor nicotinic alpha 4 subunit involved_in ISO (PMID:16332175) RGD PMID:16332175 NCBI chr 3:188,506,802...188,535,558
Ensembl chr 3:168,136,266...168,156,957 		JBrowse link
G Cyren cell cycle regulator of NHEJ involved_in IEA GO_REF:0000043 UniProt GO_REF:0000043 NCBI chr 4:64,514,477...64,519,896
Ensembl chr 4:63,547,335...63,551,602 		JBrowse link
G Dclre1a DNA cross-link repair 1A involved_in IEA GO_REF:0000043
GO_REF:0000002		 UniProt
InterPro		 GO_REF:0000002 GO_REF:0000043 NCBI chr 1:255,569,911...255,589,815
Ensembl chr 1:255,569,919...255,589,678 		JBrowse link
G Dclre1b DNA cross-link repair 1B involved_in IEA GO_REF:0000043 UniProt GO_REF:0000043 NCBI chr 2:191,309,909...191,318,399
Ensembl chr 2:191,309,913...191,318,423 		JBrowse link
G Dclre1c DNA cross-link repair 1C involved_in IEA GO_REF:0000043 UniProt GO_REF:0000043 NCBI chr17:79,684,988...79,718,399
Ensembl chr17:74,776,935...74,809,186 		JBrowse link
G Ddb1 damage-specific DNA binding protein 1 involved_in TAS
IEA
IBA		 GO_REF:0000043
GO_REF:0000033		 UniProt
GO_Central
RGD		 PMID:12145536 GO_REF:0000033 GO_REF:0000043, RGD:632554 NCBI chr 1:216,677,810...216,703,605
Ensembl chr 1:207,252,890...207,278,676 		JBrowse link
G Ddb2 damage specific DNA binding protein 2 involved_in IBA
IEA		 GO_REF:0000033
GO_REF:0000002
GO_REF:0000043		 GO_Central
InterPro
UniProt		 GO_REF:0000002 GO_REF:0000033 GO_REF:0000043 NCBI chr 3:77,185,114...77,207,650
Ensembl chr 3:77,185,109...77,207,631 		JBrowse link
G Dmap1 DNA methyltransferase 1-associated protein 1 involved_in IEA GO_REF:0000002 InterPro GO_REF:0000002 NCBI chr 5:136,380,211...136,388,229
Ensembl chr 5:131,143,729...131,151,742 		JBrowse link
G Dmc1 DNA meiotic recombinase 1 involved_in IEA GO_REF:0000002 InterPro GO_REF:0000002 NCBI chr 7:113,005,278...113,047,854
Ensembl chr 7:111,124,888...111,167,952 		JBrowse link
G Dna2 DNA replication helicase/nuclease 2 involved_in IEA GO_REF:0000043 UniProt GO_REF:0000043 NCBI chr20:25,660,339...25,689,285
Ensembl chr20:25,662,055...25,716,319 		JBrowse link
G Dntt DNA nucleotidylexotransferase involved_in IEA GO_REF:0000002 InterPro GO_REF:0000002 NCBI chr 1:249,805,802...249,837,685
Ensembl chr 1:239,856,391...239,888,282 		JBrowse link
G Dot1l DOT1 like histone lysine methyltransferase involved_in IBA
IEA		 GO_REF:0000033
GO_REF:0000104		 GO_Central
UniProt		 GO_REF:0000033 GO_REF:0000104 NCBI chr 7:9,569,439...9,607,095
Ensembl chr 7:8,917,786...8,956,475 		JBrowse link
G Eepd1 endonuclease/exonuclease/phosphatase family domain containing 1 involved_in IEA GO_REF:0000002 InterPro GO_REF:0000002 NCBI chr 8:23,957,258...24,064,343
Ensembl chr 8:23,957,255...24,064,340 		JBrowse link
G Eid3 EP300 interacting inhibitor of differentiation 3 involved_in IBA
IEA		 GO_REF:0000033
GO_REF:0000002
GO_REF:0000043		 GO_Central
InterPro
UniProt		 GO_REF:0000002 GO_REF:0000033 GO_REF:0000043 NCBI chr 7:20,860,073...20,861,395 JBrowse link
G Eme1 essential meiotic structure-specific endonuclease 1 involved_in IEA GO_REF:0000043
GO_REF:0000002		 UniProt
InterPro		 GO_REF:0000002 GO_REF:0000043 NCBI chr10:80,083,585...80,092,450
Ensembl chr10:79,586,729...79,595,435 		JBrowse link
G Eme2 essential meiotic structure-specific endonuclease subunit 2 involved_in IEA GO_REF:0000043
GO_REF:0000002		 UniProt
InterPro		 GO_REF:0000002 GO_REF:0000043 NCBI chr10:14,413,661...14,420,489
Ensembl chr10:13,913,221...13,915,968 		JBrowse link
G Endov endonuclease V involved_in ISO
IEA		 (PMID:12853604)
GO_REF:0000002		 RGD
InterPro		 PMID:12853604 GO_REF:0000002 NCBI chr10:104,760,059...104,777,732
Ensembl chr10:104,760,137...104,775,969 		JBrowse link
G ENSRNOG00000063582 involved_in IEA GO_REF:0000043
GO_REF:0000002		 UniProt
InterPro		 GO_REF:0000002 GO_REF:0000043 Ensembl chr14:22,414,838...22,415,965 JBrowse link
G ENSRNOG00000063954 involved_in IEA GO_REF:0000002
GO_REF:0000043		 InterPro
UniProt		 GO_REF:0000002 GO_REF:0000043 Ensembl chr 5:82,622,228...82,672,833 JBrowse link
G ENSRNOG00000064887 involved_in IEA GO_REF:0000043
GO_REF:0000002		 UniProt
InterPro		 GO_REF:0000002 GO_REF:0000043 Ensembl chr 4:149,498,772...149,499,899 JBrowse link
G ENSRNOG00000066166 involved_in IEA GO_REF:0000002 InterPro GO_REF:0000002 Ensembl chr13:62,124,375...62,124,887 JBrowse link
G ENSRNOG00000069305 involved_in IEA GO_REF:0000002 InterPro GO_REF:0000002 Ensembl chr13:18,979,537...18,979,779 JBrowse link
G Ep400 E1A binding protein p400 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr12:51,551,665...51,658,635
Ensembl chr12:45,891,916...45,998,861 		JBrowse link
G Ercc1 ERCC excision repair 1, endonuclease non-catalytic subunit acts_upstream_of_or_within
involved_in		 ISO
IEA		 (PMID:25538220)
GO_REF:0000002
GO_REF:0000043
MGI:2158940 (PMID:12466203)		 RGD
InterPro
UniProt		 PMID:12466203 PMID:25538220 GO_REF:0000002 GO_REF:0000043 NCBI chr 1:88,099,308...88,135,966
Ensembl chr 1:78,996,390...79,007,963 		JBrowse link
G Ercc2 ERCC excision repair 2, TFIIH core complex helicase subunit acts_upstream_of_or_within
involved_in		 ISO
IEA		 MGI:2183949 (PMID:11950998)
GO_REF:0000043
GO_REF:0000107		 RGD
UniProt
Ensembl		 PMID:11950998 GO_REF:0000043 GO_REF:0000107 NCBI chr 1:88,161,342...88,175,102
Ensembl chr 1:79,033,326...79,047,102 		JBrowse link
G Ercc3 ERCC excision repair 3, TFIIH core complex helicase subunit involved_in ISO
IEA		 (PMID:2167179)
GO_REF:0000043		 RGD
UniProt		 PMID:2167179 GO_REF:0000043 NCBI chr18:23,883,613...23,914,326
Ensembl chr18:23,883,580...23,914,329 		JBrowse link
G Ercc4 ERCC excision repair 4, endonuclease catalytic subunit involved_in
acts_upstream_of_or_within		 ISO
IEA		 UniProtKB:Q15554 (PMID:17055345), (PMID:19596235)
GO_REF:0000043
GO_REF:0000117
GO_REF:0000002
MGI:3028660 (PMID:14729965)		 RGD
UniProt
InterPro		 PMID:14729965 PMID:17055345 PMID:19596235 GO_REF:0000002 GO_REF:0000043 GO_REF:0000117 NCBI chr10:2,926,085...2,958,176
Ensembl chr10:2,419,038...2,448,369
Ensembl chr10:2,419,038...2,448,369 		JBrowse link
G Ercc4l1 excision repair cross-complementing rodent repair deficiency, complementation group 4-like 1 involved_in IEA GO_REF:0000002
GO_REF:0000043
GO_REF:0000117		 InterPro
UniProt		 GO_REF:0000002 GO_REF:0000043 GO_REF:0000117 NCBI chr10:1,462,146...1,500,409
Ensembl chr10:954,977...983,174 		JBrowse link
G Ercc5 ERCC excision repair 5, endonuclease acts_upstream_of_or_within
involved_in		 ISO
IEA		 MGI:3043589 (PMID:15082767)
GO_REF:0000117
GO_REF:0000043		 RGD
UniProt		 PMID:15082767 GO_REF:0000043 GO_REF:0000117 NCBI chr 9:46,309,477...46,354,478
Ensembl chr 9:46,309,389...46,354,472 		JBrowse link
G Ercc6 ERCC excision repair 6, chromatin remodeling factor involved_in
acts_upstream_of_or_within		 ISO
IEA		 (PMID:26218421)
GO_REF:0000107
MGI:1097693|MGI:1932102 (PMID:10806208), (PMID:12447686), (PMID:17213818)		 RGD
Ensembl		 PMID:10806208 PMID:12447686 PMID:17213818 PMID:26218421 GO_REF:0000107 NCBI chr16:7,771,311...7,841,895
Ensembl chr16:7,765,013...7,835,587 		JBrowse link
G Ercc6l ERCC excision repair 6 like, spindle assembly checkpoint helicase involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr  X:71,285,380...71,301,186
Ensembl chr  X:67,245,414...67,280,756 		JBrowse link
G Ercc8 ERCC excision repair 8, CSA ubiquitin ligase complex subunit involved_in IEA GO_REF:0000043 UniProt GO_REF:0000043 NCBI chr 2:41,380,901...41,418,294
Ensembl chr 2:39,647,452...39,684,859 		JBrowse link
G Exo1 exonuclease 1 involved_in IEA GO_REF:0000104
GO_REF:0000043		 UniProt GO_REF:0000043 GO_REF:0000104 NCBI chr13:90,341,947...90,366,861
Ensembl chr13:87,809,810...87,834,654 		JBrowse link
G Exosc10 exosome component 10 involved_in IEA GO_REF:0000043 UniProt GO_REF:0000043 NCBI chr 5:164,278,414...164,302,067
Ensembl chr 5:158,995,313...159,018,940 		JBrowse link
G Eya1 EYA transcriptional coactivator and phosphatase 1 involved_in IEA GO_REF:0000043 UniProt GO_REF:0000043 NCBI chr 5:9,646,599...9,884,609
Ensembl chr 5:4,955,543...5,101,483 		JBrowse link
G Eya2 EYA transcriptional coactivator and phosphatase 2 involved_in IEA GO_REF:0000043 UniProt GO_REF:0000043 NCBI chr 3:174,754,772...174,938,035
Ensembl chr 3:154,335,400...154,518,793 		JBrowse link
G Eya3 EYA transcriptional coactivator and phosphatase 3 involved_in IEA GO_REF:0000043 UniProt GO_REF:0000043 NCBI chr 5:150,090,535...150,218,855
Ensembl chr 5:144,806,577...144,934,518 		JBrowse link
G Eya4 EYA transcriptional coactivator and phosphatase 4 involved_in IEA GO_REF:0000043 UniProt GO_REF:0000043 NCBI chr 1:23,991,431...24,235,132
Ensembl chr 1:22,172,275...22,415,976 		JBrowse link
G Faap20 FA core complex associated protein 20 involved_in IEA GO_REF:0000043 UniProt GO_REF:0000043 NCBI chr 5:171,083,328...171,097,599
Ensembl chr 5:165,808,657...165,815,333 		JBrowse link
G Faap24 FA core complex associated protein 24 involved_in IEA GO_REF:0000043 UniProt GO_REF:0000043 NCBI chr 1:97,188,678...97,194,899
Ensembl chr 1:88,051,911...88,057,989 		JBrowse link
G Fan1 FANCD2 and FANCI associated nuclease 1 involved_in ISO
IEA		 (PMID:20603073)
GO_REF:0000043
GO_REF:0000002		 RGD
UniProt
InterPro		 PMID:20603073 GO_REF:0000002 GO_REF:0000043 NCBI chr 1:127,327,098...127,356,807
Ensembl chr 1:117,917,099...117,944,977 		JBrowse link
G Fancc FA complementation group C involved_in IEA GO_REF:0000043 UniProt GO_REF:0000043 NCBI chr17:1,686,374...1,818,672
Ensembl chr17:1,681,324...1,829,376 		JBrowse link
G Fancd2 FA complementation group D2 involved_in IEA GO_REF:0000002
GO_REF:0000043		 InterPro
UniProt		 GO_REF:0000002 GO_REF:0000043 NCBI chr 4:148,234,633...148,299,035
Ensembl chr 4:146,679,179...146,743,412 		JBrowse link
G Fanci FA complementation group I involved_in IEA GO_REF:0000002 InterPro GO_REF:0000002 NCBI chr 1:142,736,636...142,792,999
Ensembl chr 1:133,327,297...133,383,640 		JBrowse link
G Fancl FA complementation group L involved_in ISO
IEA
IBA		 (PMID:16916645)
GO_REF:0000107
GO_REF:0000033		 RGD
Ensembl
GO_Central		 PMID:16916645 GO_REF:0000033 GO_REF:0000107 NCBI chr14:100,249,733...100,317,958
Ensembl chr14:100,248,875...100,314,255 		JBrowse link
G Fancm FA complementation group M involved_in IEA GO_REF:0000117
GO_REF:0000002		 UniProt
InterPro		 GO_REF:0000002 GO_REF:0000117 NCBI chr 6:88,862,898...88,916,701
Ensembl chr 6:83,127,093...83,180,028 		JBrowse link
G Fbh1 F-box DNA helicase 1 involved_in ISO (PMID:23319600) RGD PMID:23319600 NCBI chr17:71,659,351...71,697,431
Ensembl chr17:66,749,534...66,787,590 		JBrowse link
G Fbxo6 F-box protein 6 involved_in IEA GO_REF:0000043 UniProt GO_REF:0000043 NCBI chr 5:158,576,729...158,582,520
Ensembl chr 5:158,576,759...158,582,525 		JBrowse link
G Fbxw7 F-box and WD repeat domain containing 7 involved_in IEA GO_REF:0000043 UniProt GO_REF:0000043 NCBI chr 2:172,447,738...172,609,591
Ensembl chr 2:170,149,694...170,309,941 		JBrowse link
G Fen1 flap structure-specific endonuclease 1 acts_upstream_of_or_within
involved_in		 ISO
IEA		 MGI:2670036 (PMID:12861020)
GO_REF:0000043		 RGD
UniProt		 PMID:12861020 GO_REF:0000043 NCBI chr 1:216,270,016...216,274,873
Ensembl chr 1:206,844,884...206,850,003 		JBrowse link
G Fh fumarate hydratase involved_in IEA GO_REF:0000043 UniProt GO_REF:0000043 NCBI chr13:90,056,565...90,082,450
Ensembl chr13:87,524,337...87,550,266 		JBrowse link
G Fmr1 fragile X messenger ribonucleoprotein 1 involved_in ISS
IEA
ISO		 GO_REF:0000024
GO_REF:0000107
(PMID:24813610)		 UniProt
Ensembl
RGD		 PMID:24813610 GO_REF:0000024 GO_REF:0000107 NCBI chr  X:152,284,857...152,322,686
Ensembl chr  X:147,240,301...147,278,050 		JBrowse link
G Foxm1 forkhead box M1 involved_in IEA GO_REF:0000043 UniProt GO_REF:0000043 NCBI chr 4:163,325,628...163,338,100
Ensembl chr 4:161,638,816...161,650,684 		JBrowse link
G Gtf2h1 general transcription factor IIH subunit 1 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr 1:97,321,417...97,349,455
Ensembl chr 1:97,321,394...97,349,455 		JBrowse link
G Gtf2h2 general transcription factor IIH subunit 2 involved_in IEA GO_REF:0000043
GO_REF:0000002		 UniProt
InterPro		 GO_REF:0000002 GO_REF:0000043 NCBI chr 2:33,358,863...33,386,726
Ensembl chr 2:31,624,678...31,652,592 		JBrowse link
G Gtf2h3 general transcription factor IIH subunit 3 involved_in IEA GO_REF:0000043 UniProt GO_REF:0000043 NCBI chr12:37,669,995...37,687,505
Ensembl chr12:32,009,014...32,025,497 		JBrowse link
G Gtf2h5 general transcription factor IIH subunit 5 involved_in IEA GO_REF:0000043 UniProt GO_REF:0000043 NCBI chr 1:46,656,804...46,663,512
Ensembl chr 1:46,656,859...46,664,939 		JBrowse link
G H2ax H2A.X variant histone acts_upstream_of_or_within ISO MGI:2156048 (PMID:11934988), (PMID:15364958) RGD PMID:11934988 PMID:15364958 NCBI chr 8:53,568,718...53,570,072
Ensembl chr 8:44,671,786...44,673,239
Ensembl chr 4:44,671,786...44,673,239 		JBrowse link
G Haus3 HAUS augmin-like complex, subunit 3 involved_in IEA GO_REF:0000117 UniProt GO_REF:0000117 NCBI chr14:76,580,549...76,599,542
Ensembl chr14:76,580,546...76,752,463 		JBrowse link
G Hdac10 histone deacetylase 10 involved_in IEA GO_REF:0000043 UniProt GO_REF:0000043 NCBI chr 7:122,078,768...122,084,457
Ensembl chr 7:120,199,129...120,204,228 		JBrowse link
G Hdac9 histone deacetylase 9 acts_upstream_of_or_within ISO MGI:1890508 (PMID:21746928) RGD PMID:21746928 NCBI chr 6:56,489,472...57,351,654
Ensembl chr 6:50,763,590...51,625,333 		JBrowse link
G Hdgfl2 HDGF like 2 involved_in IEA GO_REF:0000043 UniProt GO_REF:0000043 NCBI chr 9:996,687...1,016,352
Ensembl chr 9:909,614...929,186 		JBrowse link
G Hinfp histone H4 transcription factor involved_in ISO (PMID:17974976) RGD PMID:17974976 NCBI chr 8:44,634,333...44,644,288
Ensembl chr 8:44,634,333...44,641,000 		JBrowse link
G Hltf helicase-like transcription factor involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr 2:102,549,724...102,609,492
Ensembl chr 2:102,549,724...102,609,327 		JBrowse link
G Hmgb1 high mobility group box 1 involved_in IEA GO_REF:0000043 UniProt GO_REF:0000043 NCBI chr12:11,009,236...11,015,941
Ensembl chr12:5,901,586...5,978,565
Ensembl chr16:5,901,586...5,978,565 		JBrowse link
G Hmgb1l2 high mobility group box 1 like 2 involved_in IEA GO_REF:0000043 UniProt GO_REF:0000043 NCBI chr  X:107,671,273...107,672,015
Ensembl chr  X:107,671,272...107,672,535 		JBrowse link
G Hpf1 histone PARylation factor 1 involved_in ISO
IEA		 (PMID:32028527), (PMID:34108479)
GO_REF:0000107		 RGD
Ensembl		 PMID:32028527 PMID:34108479 GO_REF:0000107 NCBI chr16:29,203,749...29,219,651
Ensembl chr16:29,183,256...29,219,716 		JBrowse link
G Hrob homologous recombination factor with OB-fold involved_in IEA GO_REF:0000043 UniProt GO_REF:0000043 NCBI chr10:87,206,017...87,222,483
Ensembl chr10:87,206,049...87,222,483 		JBrowse link
G Hspa1a heat shock protein family A (Hsp70) member 1A acts_upstream_of_or_within ISO MGI:3028843 (PMID:14701760) RGD PMID:14701760 NCBI chr20:3,875,411...3,877,866
Ensembl chr20:3,856,006...3,873,227 		JBrowse link
G Huwe1 HECT, UBA and WWE domain containing E3 ubiquitin protein ligase 1 involved_in IEA GO_REF:0000043 UniProt GO_REF:0000043 NCBI chr  X:20,873,795...21,001,378
Ensembl chr  X:20,873,795...21,001,262 		JBrowse link
G Inip INTS3 and NABP interacting protein involved_in ISO
IEA
IBA		 (PMID:19605351)
GO_REF:0000107
GO_REF:0000002
GO_REF:0000104
GO_REF:0000043
GO_REF:0000033		 RGD
Ensembl
InterPro
UniProt
GO_Central		 PMID:19605351 GO_REF:0000002 GO_REF:0000033 GO_REF:0000043 GO_REF:0000104 GO_REF:0000107 NCBI chr 5:79,443,317...79,457,552
Ensembl chr 5:74,648,392...74,662,628 		JBrowse link
G Ino80 INO80 complex ATPase subunit involved_in IBA
IEA		 GO_REF:0000033
GO_REF:0000043
GO_REF:0000104
GO_REF:0000002		 GO_Central
UniProt
InterPro		 GO_REF:0000002 GO_REF:0000033 GO_REF:0000043 GO_REF:0000104 NCBI chr 3:126,822,280...126,919,532
Ensembl chr 3:106,368,455...106,467,911 		JBrowse link
G Ino80c INO80 complex subunit C involved_in IEA GO_REF:0000043 UniProt GO_REF:0000043 NCBI chr18:15,653,508...15,752,455
Ensembl chr18:15,378,770...15,393,403 		JBrowse link
G Ino80e INO80 complex subunit E involved_in IEA GO_REF:0000043 UniProt GO_REF:0000043 NCBI chr 1:190,891,315...190,902,902
Ensembl chr 1:181,461,408...181,472,469 		JBrowse link
G Ints3 integrator complex subunit 3 involved_in ISO
IEA		 (PMID:19605351), (PMID:19683501)
GO_REF:0000107		 RGD
Ensembl		 PMID:19605351 PMID:19683501 GO_REF:0000107 NCBI chr 2:175,859,421...175,911,683
Ensembl chr 2:175,859,440...175,911,709 		JBrowse link
G Kat5 lysine acetyltransferase 5 involved_in IEA GO_REF:0000043 UniProt GO_REF:0000043 NCBI chr 1:212,325,089...212,332,640
Ensembl chr 1:202,895,751...202,903,458 		JBrowse link
G Kat7 lysine acetyltransferase 7 involved_in IEA GO_REF:0000043 UniProt GO_REF:0000043 NCBI chr10:80,718,335...80,752,387
Ensembl chr10:80,221,524...80,255,567 		JBrowse link
G Kif22 kinesin family member 22 involved_in IEA GO_REF:0000002 InterPro GO_REF:0000002 NCBI chr 1:191,065,875...191,080,955
Ensembl chr 1:181,635,183...181,650,401 		JBrowse link
G Kmt5b lysine methyltransferase 5B involved_in ISO
IEA
ISS		 (PMID:28114273)
GO_REF:0000107
GO_REF:0000024		 RGD
Ensembl
UniProt		 PMID:28114273 GO_REF:0000024 GO_REF:0000107 NCBI chr 1:210,429,672...210,479,042
Ensembl chr 1:201,000,444...201,049,819 		JBrowse link
G Kmt5c lysine methyltransferase 5C involved_in ISO
IEA
ISS		 (PMID:28114273)
GO_REF:0000107
GO_REF:0000024		 RGD
Ensembl
UniProt		 PMID:28114273 GO_REF:0000024 GO_REF:0000107 NCBI chr 1:78,128,325...78,135,931
Ensembl chr 1:69,099,539...69,107,145 		JBrowse link
G Lig1 DNA ligase 1 involved_in
NOT|acts_upstream_of_or_within		 IDA
IEA
ISO		 GO_REF:0000002
GO_REF:0000043
MGI:2179196 (PMID:11896201)
(PMID:21390131)
GO_REF:0000117		 InterPro
UniProt
RGD		 PMID:11896201 PMID:21390131 PMID:1730240 GO_REF:0000002 GO_REF:0000043 GO_REF:0000117, RGD:724410 NCBI chr 1:83,243,043...83,281,707
Ensembl chr 1:74,165,842...74,204,413 		JBrowse link
G Lig3 DNA ligase 3 involved_in IEA GO_REF:0000002
GO_REF:0000117
GO_REF:0000043		 InterPro
UniProt		 GO_REF:0000002 GO_REF:0000043 GO_REF:0000117 NCBI chr10:68,215,371...68,238,705
Ensembl chr10:67,717,812...67,798,414 		JBrowse link
G Lig4 DNA ligase 4 acts_upstream_of_or_within
involved_in		 ISO
IEA		 MGI:1857732 (PMID:11779495), (PMID:21390131)
GO_REF:0000117
GO_REF:0000002
GO_REF:0000043		 RGD
UniProt
InterPro		 PMID:11779495 PMID:21390131 GO_REF:0000002 GO_REF:0000043 GO_REF:0000117 NCBI chr16:86,220,345...86,228,930
Ensembl chr16:79,518,312...79,527,040 		JBrowse link
G LOC100363428 PCNA-associated factor-like involved_in IEA GO_REF:0000043 UniProt GO_REF:0000043 NCBI chr15:84,610,314...84,612,236
Ensembl chr15:84,610,352...84,610,684 		JBrowse link
G LOC120103497 general transcription factor IIH subunit 5-like involved_in IEA GO_REF:0000043 UniProt GO_REF:0000043 NCBI chr 6:27,109,209...27,114,478
Ensembl chr 6:27,111,331...27,111,546 		JBrowse link
G LOC134483981 high mobility group protein B1-like involved_in IEA GO_REF:0000043 UniProt GO_REF:0000043 Ensembl chr 1:222,796,915...222,798,193 JBrowse link
G LOC134485624 high mobility group protein B1-like involved_in IEA GO_REF:0000043 UniProt GO_REF:0000043
G Macroh2a1 macroH2A.1 histone involved_in ISO
IEA		 (PMID:21211722)
GO_REF:0000107		 RGD
Ensembl		 PMID:21211722 GO_REF:0000107 NCBI chr17:8,484,340...8,547,268
Ensembl chr17:8,479,372...8,542,072 		JBrowse link
G Mbd4 methyl-CpG binding domain 4 DNA glycosylase involved_in IEA GO_REF:0000043
GO_REF:0000002		 UniProt
InterPro		 GO_REF:0000002 GO_REF:0000043 NCBI chr 4:150,565,646...150,577,433
Ensembl chr 4:148,894,280...148,904,982 		JBrowse link
G Mcm8 minichromosome maintenance 8 homologous recombination repair factor involved_in IEA GO_REF:0000043 UniProt GO_REF:0000043 NCBI chr 3:140,539,590...140,569,891
Ensembl chr 3:120,086,763...120,117,008 		JBrowse link
G Mcm9 minichromosome maintenance 9 homologous recombination repair factor involved_in IEA GO_REF:0000043 UniProt GO_REF:0000043 NCBI chr20:32,818,219...32,929,577
Ensembl chr20:32,844,951...32,929,600 		JBrowse link
G Mcmdc2 minichromosome maintenance domain containing 2 involved_in IEA GO_REF:0000043 UniProt GO_REF:0000043 NCBI chr 5:14,071,609...14,120,435
Ensembl chr 5:9,298,101...9,338,300 		JBrowse link
G Mdc1 mediator of DNA damage checkpoint 1 involved_in IEA GO_REF:0000043 UniProt GO_REF:0000043 NCBI chr20:2,898,496...2,914,960
Ensembl chr20:2,895,505...2,910,240 		JBrowse link
G Mgme1 mitochondrial genome maintenance exonuclease 1 involved_in IEA GO_REF:0000117 UniProt GO_REF:0000117 NCBI chr 3:152,094,514...152,103,314
Ensembl chr 3:131,640,944...131,649,932 		JBrowse link
G Mgmt O-6-methylguanine-DNA methyltransferase involved_in
acts_upstream_of_or_within		 IEA
ISO
IBA		 GO_REF:0000043
GO_REF:0000002
(PMID:13679151)
GO_REF:0000033		 UniProt
InterPro
RGD
GO_Central		 PMID:13679151 GO_REF:0000002 GO_REF:0000033 GO_REF:0000043 NCBI chr 1:201,140,832...201,367,481
Ensembl chr 1:191,710,930...191,937,756 		JBrowse link
G Mlh1 mutL homolog 1 acts_upstream_of_or_within
involved_in		 ISO
IEA		 MGI:1858054|MGI:1930998 (PMID:13679151), (PMID:15480418)
GO_REF:0000107
GO_REF:0000043		 RGD
Ensembl
UniProt		 PMID:13679151 PMID:15480418 GO_REF:0000043 GO_REF:0000107 NCBI chr 8:120,074,871...120,112,109
Ensembl chr 8:111,196,468...111,233,617 		JBrowse link
G Mms19 MMS19 homolog, cytosolic iron-sulfur assembly component involved_in IEA GO_REF:0000104
GO_REF:0000043		 UniProt GO_REF:0000043 GO_REF:0000104 NCBI chr 1:250,706,595...250,743,604
Ensembl chr 1:240,757,282...240,794,288 		JBrowse link
G Mms22l MMS22-like, DNA repair protein involved_in IEA GO_REF:0000043 UniProt GO_REF:0000043 NCBI chr 5:42,994,382...43,110,371
Ensembl chr 5:38,197,779...38,313,745 		JBrowse link
G Mnat1 MNAT1 component of CDK activating kinase involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr 6:91,814,703...91,971,945
Ensembl chr 6:91,814,749...91,970,744 		JBrowse link
G Morf4l1 mortality factor 4 like 1 involved_in IEA GO_REF:0000043 UniProt GO_REF:0000043 NCBI chr 8:99,522,801...99,544,432
Ensembl chr 8:90,642,988...90,664,519 		JBrowse link
G Morf4l2 mortality factor 4 like 2 involved_in IEA GO_REF:0000043 UniProt GO_REF:0000043 NCBI chr  X:104,874,850...104,885,946
Ensembl chr  X:100,082,404...100,093,728 		JBrowse link
G Mpg N-methylpurine-DNA glycosylase involved_in IEA GO_REF:0000043 UniProt GO_REF:0000043 NCBI chr10:15,396,246...15,402,528
Ensembl chr10:15,395,782...15,402,520 		JBrowse link
G Mre11 MRE11 homolog, double strand break repair nuclease involved_in IEA GO_REF:0000043 UniProt GO_REF:0000043 NCBI chr 8:19,900,211...19,961,906
Ensembl chr 8:11,632,354...11,678,279 		JBrowse link
G Msh2 mutS homolog 2 involved_in
acts_upstream_of_or_within		 ISO
IEA		 (PMID:8942985)
GO_REF:0000107
GO_REF:0000043
(PMID:12687013)		 RGD
Ensembl
UniProt		 PMID:8942985 PMID:12687013 GO_REF:0000043 GO_REF:0000107 NCBI chr 6:12,567,368...12,626,534
Ensembl chr 6:6,813,795...6,872,938 		JBrowse link
G Msh3 mutS homolog 3 involved_in ISO (PMID:8942985) RGD PMID:8942985 NCBI chr 2:25,179,400...25,320,857 JBrowse link
G Msh5 mutS homolog 5 involved_in IEA GO_REF:0000043 UniProt GO_REF:0000043 NCBI chr20:3,779,180...3,797,996
Ensembl chr20:3,776,942...3,793,336 		JBrowse link
G Msh6 mutS homolog 6 involved_in ISO
IEA		 (PMID:8942985)
GO_REF:0000043
GO_REF:0000107		 RGD
UniProt
Ensembl		 PMID:8942985 GO_REF:0000043 GO_REF:0000107 NCBI chr 6:12,316,190...12,333,505
Ensembl chr 6:6,562,632...6,579,956 		JBrowse link
G Mus81 MUS81 structure-specific endonuclease subunit involved_in ISO
IEA		 (PMID:19596235)
GO_REF:0000107
GO_REF:0000117
GO_REF:0000043		 RGD
Ensembl
UniProt		 PMID:19596235 GO_REF:0000043 GO_REF:0000107 GO_REF:0000117 NCBI chr 1:212,219,793...212,225,214
Ensembl chr 1:202,790,466...202,795,843 		JBrowse link
G Mutyh mutY DNA glycosylase involved_in IEA GO_REF:0000043
GO_REF:0000002		 UniProt
InterPro		 GO_REF:0000002 GO_REF:0000043 NCBI chr 5:135,510,666...135,522,777
Ensembl chr 5:130,274,122...130,286,146 		JBrowse link
G Nabp1 nucleic acid binding protein 1 involved_in ISS
IEA
ISO		 GO_REF:0000024
GO_REF:0000043
(PMID:19683501)		 UniProt
RGD		 PMID:19683501 GO_REF:0000024 GO_REF:0000043 NCBI chr 9:50,098,552...50,133,982
Ensembl chr 9:50,126,726...50,134,107 		JBrowse link
G Nabp2 nucleic acid binding protein 2 involved_in ISO
IEA
ISS		 (PMID:18449195), (PMID:19683501)
GO_REF:0000107
GO_REF:0000043
(PMID:25589350)
GO_REF:0000024		 RGD
Ensembl
UniProt		 PMID:18449195 PMID:19683501 PMID:25589350 GO_REF:0000024 GO_REF:0000043 GO_REF:0000107 NCBI chr 7:830,949...836,551
Ensembl chr 7:830,949...838,027 		JBrowse link
G Nbn nibrin involved_in IEA GO_REF:0000002
GO_REF:0000043		 InterPro
UniProt		 GO_REF:0000002 GO_REF:0000043 NCBI chr 5:34,256,678...34,291,163
Ensembl chr 5:29,459,457...29,494,150 		JBrowse link
G Neil1 nei-like DNA glycosylase 1 acts_upstream_of_or_within
involved_in		 ISO
IEA		 (PMID:12200441)
GO_REF:0000117
GO_REF:0000043
GO_REF:0000107		 RGD
UniProt
Ensembl		 PMID:12200441 GO_REF:0000043 GO_REF:0000107 GO_REF:0000117 NCBI chr 8:66,446,106...66,452,844
Ensembl chr 8:57,550,147...57,556,258 		JBrowse link
G Neil3 nei-like DNA glycosylase 3 involved_in IEA GO_REF:0000117
GO_REF:0000043
GO_REF:0000002		 UniProt
InterPro		 GO_REF:0000002 GO_REF:0000043 GO_REF:0000117 NCBI chr16:45,091,401...45,151,419
Ensembl chr16:38,359,371...38,418,527 		JBrowse link
G Nhej1 nonhomologous end-joining factor 1 involved_in IEA GO_REF:0000043 UniProt GO_REF:0000043 NCBI chr 9:83,974,995...84,071,161
Ensembl chr 9:76,526,324...76,622,444 		JBrowse link
G Nme3 NME/NM23 nucleoside diphosphate kinase 3 involved_in ISO
IEA		 (PMID:26945015)
GO_REF:0000107		 RGD
Ensembl		 PMID:26945015 GO_REF:0000107 NCBI chr10:14,421,922...14,422,878
Ensembl chr10:13,917,403...13,918,359 		JBrowse link
G Nono non-POU domain containing, octamer-binding involved_in IEA GO_REF:0000043 UniProt GO_REF:0000043 NCBI chr  X:70,594,116...70,611,976
Ensembl chr  X:66,554,098...66,571,952 		JBrowse link
G Nop53 NOP53 ribosome biogenesis factor involved_in ISO
IEA		 (PMID:21741933)
GO_REF:0000107		 RGD
Ensembl		 PMID:21741933 GO_REF:0000107 NCBI chr 1:85,757,271...85,765,089
Ensembl chr 1:76,629,069...76,636,902 		JBrowse link
G Npm1 nucleophosmin 1 involved_in ISO
ISS		 (PMID:19188445)
GO_REF:0000024		 RGD
UniProt		 PMID:19188445 GO_REF:0000024 NCBI chr10:18,245,739...18,255,913
Ensembl chr10:17,739,941...17,751,645
Ensembl chr  X:17,739,941...17,751,645 		JBrowse link
G Nsmce1 NSE1 homolog, SMC5-SMC6 complex component involved_in IEA GO_REF:0000104
GO_REF:0000002
GO_REF:0000043		 UniProt
InterPro		 GO_REF:0000002 GO_REF:0000043 GO_REF:0000104 NCBI chr 1:180,030,355...180,058,541
Ensembl chr 1:180,030,160...180,058,417 		JBrowse link
G Nsmce2 NSE2/MMS21 homolog, SMC5-SMC6 complex SUMO ligase involved_in IEA GO_REF:0000043 UniProt GO_REF:0000043 NCBI chr 7:92,825,568...93,071,037
Ensembl chr 7:90,936,112...91,164,899 		JBrowse link
G Nsmce3 NSE3 homolog, SMC5-SMC6 complex component involved_in ISO (PMID:27427983) RGD PMID:27427983 NCBI chr 1:118,401,302...118,402,629 JBrowse link
G Nsmce4a NSE4 homolog A, SMC5-SMC6 complex component involved_in IBA
IEA		 GO_REF:0000033
GO_REF:0000043
GO_REF:0000002
GO_REF:0000104		 GO_Central
UniProt
InterPro		 GO_REF:0000002 GO_REF:0000033 GO_REF:0000043 GO_REF:0000104 NCBI chr 1:185,102,075...185,109,166
Ensembl chr 1:185,094,360...185,109,166 		JBrowse link
G Nthl1 nth-like DNA glycosylase 1 involved_in IEA GO_REF:0000002
GO_REF:0000117
GO_REF:0000043		 InterPro
UniProt		 GO_REF:0000002 GO_REF:0000043 GO_REF:0000117 NCBI chr10:14,160,334...14,166,502
Ensembl chr10:13,655,785...13,661,957 		JBrowse link
G Nucks1 nuclear casein kinase and cyclin-dependent kinase substrate 1 involved_in IEA GO_REF:0000043 UniProt GO_REF:0000043 NCBI chr13:45,897,275...45,926,491
Ensembl chr13:43,345,115...43,370,229 		JBrowse link
G Ogg1 8-oxoguanine DNA glycosylase acts_upstream_of_or_within
involved_in		 ISO
IEA		 MGI:1100494|MGI:2386212|MGI:2386943 (PMID:11532868), (PMID:12447686), (PMID:12874039), (PMID:17213818)
GO_REF:0000002
GO_REF:0000117
GO_REF:0000043		 RGD
InterPro
UniProt		 PMID:11532868 PMID:12447686 PMID:12874039 PMID:17213818 GO_REF:0000002 GO_REF:0000043 GO_REF:0000117 NCBI chr 4:148,030,237...148,037,599
Ensembl chr 4:146,474,750...146,484,766 		JBrowse link
G Otub1 OTU deubiquitinase, ubiquitin aldehyde binding 1 involved_in IEA GO_REF:0000043 UniProt GO_REF:0000043 NCBI chr 1:213,816,400...213,824,679
Ensembl chr 1:204,387,215...204,395,483 		JBrowse link
G Pagr1 Paxip1-associated glutamate-rich protein 1 involved_in IEA GO_REF:0000043 UniProt GO_REF:0000043 NCBI chr 1:191,053,228...191,055,554 JBrowse link
G Park7 Parkinsonism associated deglycase involved_in ISO
ISS		 (PMID:28596309)
GO_REF:0000024		 RGD
UniProt		 PMID:28596309 GO_REF:0000024 NCBI chr 5:166,636,551...166,659,825
Ensembl chr 5:161,353,719...161,376,970 		JBrowse link
G Parp1 poly (ADP-ribose) polymerase 1 involved_in ISO
IEA		 (PMID:30104678), (PMID:30675909), (PMID:31796734), (PMID:32028527), (PMID:33186521), (PMID:34874266)
GO_REF:0000043
GO_REF:0000107
(PMID:22736760)		 RGD
UniProt
Ensembl		 PMID:22736760 PMID:30104678 PMID:30675909 PMID:31796734 PMID:32028527 More... GO_REF:0000043 GO_REF:0000107 NCBI chr13:94,839,484...94,871,295
Ensembl chr13:92,307,586...92,339,404 		JBrowse link
G Parp2 poly (ADP-ribose) polymerase 2 involved_in ISO
IEA		 (PMID:30104678), (PMID:34108479)
GO_REF:0000043		 RGD
UniProt		 PMID:30104678 PMID:34108479 GO_REF:0000043 NCBI chr15:24,034,069...24,044,340
Ensembl chr15:24,034,106...24,044,338 		JBrowse link
G Parp3 poly (ADP-ribose) polymerase family, member 3 involved_in IEA GO_REF:0000043 UniProt GO_REF:0000043 NCBI chr 8:115,989,721...115,995,822
Ensembl chr 8:107,111,012...107,116,782 		JBrowse link
G Parpbp PARP1 binding protein involved_in IEA GO_REF:0000043 UniProt GO_REF:0000043 NCBI chr 7:24,398,897...24,468,330
Ensembl chr 7:22,511,427...22,573,695 		JBrowse link
G Pclaf PCNA clamp associated factor involved_in IEA GO_REF:0000043 UniProt GO_REF:0000043 NCBI chr 8:75,311,028...75,328,108
Ensembl chr 8:66,420,587...66,432,994
Ensembl chr 8:66,420,587...66,432,994 		JBrowse link
G Pcna proliferating cell nuclear antigen involved_in IEA GO_REF:0000043 UniProt GO_REF:0000043 NCBI chr 3:139,951,948...139,955,820
Ensembl chr 3:119,498,810...119,502,995 		JBrowse link
G Pds5a PDS5 cohesin associated factor A involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr14:42,905,734...43,004,740
Ensembl chr14:42,552,647...42,648,669 		JBrowse link
G Pds5b PDS5 cohesin associated factor B involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr12:202,481...345,596
Ensembl chr12:255,313...345,596 		JBrowse link
G Pif1 PIF1 5'-to-3' DNA helicase involved_in IEA GO_REF:0000104
GO_REF:0000043
GO_REF:0000002		 UniProt
InterPro		 GO_REF:0000002 GO_REF:0000043 GO_REF:0000104 NCBI chr 8:66,110,641...66,120,202
Ensembl chr 8:66,111,072...66,120,200 		JBrowse link
G Pms2 PMS1 homolog 2, mismatch repair system component acts_upstream_of_or_within ISO
IEA		 MGI:1857947 (PMID:15480418)
GO_REF:0000107		 RGD
Ensembl		 PMID:15480418 GO_REF:0000107 NCBI chr12:15,790,478...15,814,790
Ensembl chr12:10,676,764...10,701,066 		JBrowse link
G Pnkp polynucleotide kinase 3'-phosphatase involved_in ISO
IEA
IBA		 UniProtKB:J7Q8E6|UniProtKB:J7QRV0 (PMID:10446192)
GO_REF:0000107
GO_REF:0000002
GO_REF:0000043
GO_REF:0000033		 RGD
Ensembl
InterPro
UniProt
GO_Central		 PMID:10446192 GO_REF:0000002 GO_REF:0000033 GO_REF:0000043 GO_REF:0000107 NCBI chr 1:104,476,801...104,483,409
Ensembl chr 1:95,341,620...95,346,920 		JBrowse link
G Pola1 DNA polymerase alpha 1, catalytic subunit involved_in
NOT|involved_in		 ISO
ISS		 (PMID:11470886)
GO_REF:0000024
(PMID:3335506)		 RGD
UniProt		 PMID:3335506 PMID:11470886 GO_REF:0000024 NCBI chr  X:62,028,475...62,342,455
Ensembl chr  X:58,034,619...58,348,536 		JBrowse link
G Polb DNA polymerase beta involved_in IEA GO_REF:0000043
GO_REF:0000002		 UniProt
InterPro		 GO_REF:0000002 GO_REF:0000043 NCBI chr16:76,081,903...76,105,174
Ensembl chr16:69,379,400...69,404,812 		JBrowse link
G Pold1 DNA polymerase delta 1, catalytic subunit involved_in IEA GO_REF:0000043 UniProt GO_REF:0000043 NCBI chr 1:104,161,984...104,178,074
Ensembl chr 1:95,025,499...95,036,465 		JBrowse link
G Pold2 DNA polymerase delta 2, accessory subunit involved_in IEA GO_REF:0000043 UniProt GO_REF:0000043 NCBI chr14:84,962,933...84,969,148
Ensembl chr14:80,748,974...80,755,160 		JBrowse link
G Pole DNA polymerase epsilon, catalytic subunit involved_in IEA GO_REF:0000002 InterPro GO_REF:0000002 NCBI chr12:52,005,155...52,053,761
Ensembl chr12:46,345,420...46,393,939 		JBrowse link
G Polh DNA polymerase eta involved_in IEA GO_REF:0000043
GO_REF:0000002		 UniProt
InterPro		 GO_REF:0000002 GO_REF:0000043 NCBI chr 9:22,275,929...22,310,576
Ensembl chr 9:14,777,888...14,812,723 		JBrowse link
G Poli DNA polymerase iota involved_in IEA GO_REF:0000002 InterPro GO_REF:0000002 NCBI chr18:64,116,774...64,134,373
Ensembl chr18:64,116,774...64,163,418 		JBrowse link
G Polk DNA polymerase kappa involved_in
acts_upstream_of_or_within		 ISO
IEA		 (PMID:28297716)
GO_REF:0000002
GO_REF:0000043
GO_REF:0000107
MGI:2445458 (PMID:12555660)		 RGD
InterPro
UniProt
Ensembl		 PMID:12555660 PMID:28297716 GO_REF:0000002 GO_REF:0000043 GO_REF:0000107 NCBI chr 2:29,556,831...29,616,960
Ensembl chr 2:27,822,679...27,882,313 		JBrowse link
G Poll DNA polymerase lambda involved_in IEA GO_REF:0000043
GO_REF:0000002		 UniProt
InterPro		 GO_REF:0000002 GO_REF:0000043 NCBI chr 1:254,349,229...254,357,689
Ensembl chr 1:244,400,204...244,408,662 		JBrowse link
G Polm DNA polymerase mu involved_in IEA GO_REF:0000002
GO_REF:0000043		 InterPro
UniProt		 GO_REF:0000002 GO_REF:0000043 NCBI chr14:84,921,039...84,930,649
Ensembl chr14:80,706,345...80,717,086 		JBrowse link
G Poln DNA polymerase nu involved_in IEA GO_REF:0000117 UniProt GO_REF:0000117 NCBI chr14:76,579,983...76,752,460
Ensembl chr14:76,580,546...76,752,463 		JBrowse link
G Polq DNA polymerase theta acts_upstream_of_or_within
involved_in		 ISO
IEA		 MGI:107202|MGI:2656007 (PMID:12663541), (PMID:15542845)
GO_REF:0000107
GO_REF:0000117		 RGD
Ensembl
UniProt		 PMID:12663541 PMID:15542845 GO_REF:0000107 GO_REF:0000117 NCBI chr11:77,179,190...77,281,270
Ensembl chr11:63,673,816...63,775,878 		JBrowse link
G Prkdc protein kinase, DNA-activated, catalytic subunit involved_in IEA GO_REF:0000002
GO_REF:0000043		 InterPro
UniProt		 GO_REF:0000002 GO_REF:0000043 NCBI chr11:98,544,952...98,762,499
Ensembl chr11:85,040,792...85,257,952 		JBrowse link
G Prpf19 pre-mRNA processing factor 19 involved_in IEA GO_REF:0000043 UniProt GO_REF:0000043 NCBI chr 1:216,966,104...216,977,549
Ensembl chr 1:207,541,595...207,552,662 		JBrowse link
G Psme4 proteasome activator subunit 4 involved_in ISO
IEA		 (PMID:23706739)
GO_REF:0000107
GO_REF:0000043		 RGD
Ensembl
UniProt		 PMID:23706739 GO_REF:0000043 GO_REF:0000107 NCBI chr14:104,505,716...104,609,410
Ensembl chr14:104,505,716...104,609,408 		JBrowse link
G Pttg1 PTTG1 regulator of sister chromatid separation, securin involved_in IEA GO_REF:0000043 UniProt GO_REF:0000043 NCBI chr10:28,394,940...28,406,410
Ensembl chr10:27,893,689...27,904,837 		JBrowse link
G Pwwp3a PWWP domain containing 3A, DNA repair factor involved_in ISS
IEA
IBA
ISO		 GO_REF:0000024
GO_REF:0000043
GO_REF:0000033
GO_REF:0000107
(PMID:20347427)		 UniProt
GO_Central
Ensembl
RGD		 PMID:20347427 GO_REF:0000024 GO_REF:0000033 GO_REF:0000043 GO_REF:0000107 NCBI chr 7:9,465,180...9,482,053
Ensembl chr 7:9,465,195...9,481,966 		JBrowse link
G Rad1 RAD1 checkpoint DNA exonuclease involved_in IBA
IEA		 GO_REF:0000033
GO_REF:0000043		 GO_Central
UniProt		 GO_REF:0000033 GO_REF:0000043 NCBI chr 2:61,188,755...61,196,868
Ensembl chr 2:59,461,607...59,469,689 		JBrowse link
G Rad17 RAD17 checkpoint clamp loader component involved_in IBA
IEA		 GO_REF:0000033
GO_REF:0000002		 GO_Central
InterPro		 GO_REF:0000002 GO_REF:0000033 NCBI chr 2:33,498,335...33,528,614
Ensembl chr 2:31,764,261...31,794,072 		JBrowse link
G Rad18 RAD18 E3 ubiquitin protein ligase involved_in IEA GO_REF:0000002
GO_REF:0000043		 InterPro
UniProt		 GO_REF:0000002 GO_REF:0000043 NCBI chr 4:147,291,463...147,376,904
Ensembl chr 4:145,735,654...145,821,069 		JBrowse link
G Rad23a RAD23 homolog A, nucleotide excision repair protein involved_in IEA GO_REF:0000043 UniProt GO_REF:0000043 NCBI chr19:40,219,235...40,225,543
Ensembl chr19:23,314,797...23,320,695 		JBrowse link
G Rad23b RAD23 homolog B, nucleotide excision repair protein involved_in IEA GO_REF:0000043 UniProt GO_REF:0000043 NCBI chr 5:74,885,518...74,923,621
Ensembl chr 5:70,090,232...70,128,319 		JBrowse link
G Rad50 RAD50 double strand break repair protein involved_in ISS
IEA
ISO		 GO_REF:0000024
GO_REF:0000002
GO_REF:0000107
GO_REF:0000043
(PMID:9705271)		 UniProt
InterPro
Ensembl
RGD		 PMID:9705271 GO_REF:0000002 GO_REF:0000024 GO_REF:0000043 GO_REF:0000107 NCBI chr10:38,310,147...38,362,100
Ensembl chr10:37,808,726...37,861,396 		JBrowse link
G Rad51 RAD51 recombinase involved_in IEA GO_REF:0000043
GO_REF:0000117
GO_REF:0000002		 UniProt
InterPro		 GO_REF:0000002 GO_REF:0000043 GO_REF:0000117 NCBI chr 3:126,554,210...126,578,888
Ensembl chr 3:106,100,381...106,125,035 		JBrowse link
G Rad51b RAD51 paralog B involved_in IEA GO_REF:0000002 InterPro GO_REF:0000002 NCBI chr 6:103,829,390...104,373,923
Ensembl chr 6:98,098,868...98,640,979 		JBrowse link
G Rad51c RAD51 paralog C involved_in ISO
IEA		 (PMID:19451272)
GO_REF:0000107
GO_REF:0000002
GO_REF:0000043		 RGD
Ensembl
InterPro
UniProt		 PMID:19451272 GO_REF:0000002 GO_REF:0000043 GO_REF:0000107 NCBI chr10:72,702,299...72,728,980
Ensembl chr10:72,205,032...72,231,248 		JBrowse link
G Rad51d RAD51 paralog D involved_in IEA GO_REF:0000043
GO_REF:0000117
GO_REF:0000002		 UniProt
InterPro		 GO_REF:0000002 GO_REF:0000043 GO_REF:0000117 NCBI chr10:68,303,350...68,322,002
Ensembl chr10:67,740,712...67,824,434 		JBrowse link
G Rad52 RAD52 homolog, DNA repair protein involved_in IEA GO_REF:0000002
GO_REF:0000043		 InterPro
UniProt		 GO_REF:0000002 GO_REF:0000043 NCBI chr 4:154,778,320...154,802,002
Ensembl chr 4:153,106,062...153,128,207 		JBrowse link
G Rad9a RAD9 checkpoint clamp component A involved_in IBA
IEA		 GO_REF:0000033
GO_REF:0000002
GO_REF:0000104		 GO_Central
InterPro
UniProt		 GO_REF:0000002 GO_REF:0000033 GO_REF:0000104 NCBI chr 1:210,917,970...210,983,038
Ensembl chr 1:201,487,136...201,553,608 		JBrowse link
G Rad9b RAD9 checkpoint clamp component B involved_in IEA
IBA		 GO_REF:0000104
GO_REF:0000002
GO_REF:0000033		 UniProt
InterPro
GO_Central		 GO_REF:0000002 GO_REF:0000033 GO_REF:0000104 NCBI chr12:34,217,868...34,248,380
Ensembl chr12:34,218,024...34,248,372 		JBrowse link
G Rbbp8 RB binding protein 8, endonuclease involved_in IEA GO_REF:0000043
GO_REF:0000002		 UniProt
InterPro		 GO_REF:0000002 GO_REF:0000043 NCBI chr18:3,198,188...3,263,643
Ensembl chr18:2,921,286...2,988,846 		JBrowse link
G Rdm1 RAD52 motif containing 1 involved_in IEA GO_REF:0000117 UniProt GO_REF:0000117 NCBI chr10:87,062,322...87,073,273
Ensembl chr10:86,539,553...86,573,034 		JBrowse link
G Recql RecQ like helicase involved_in IEA GO_REF:0000002 InterPro GO_REF:0000002 NCBI chr 4:175,308,337...175,332,965
Ensembl chr 4:175,304,117...175,332,945 		JBrowse link
G Recql5 RecQ like helicase 5 involved_in ISS
IEA
ISO		 GO_REF:0000024
GO_REF:0000043
(PMID:22973052)		 UniProt
RGD		 PMID:22973052 GO_REF:0000024 GO_REF:0000043 NCBI chr10:101,625,477...101,664,582
Ensembl chr10:101,126,547...101,165,652 		JBrowse link
G Rev1 REV1, DNA directed polymerase involved_in ISO
IEA		 (PMID:21926160)
GO_REF:0000043
GO_REF:0000002		 RGD
UniProt
InterPro		 PMID:21926160 GO_REF:0000002 GO_REF:0000043 NCBI chr 9:40,278,100...40,351,764
Ensembl chr 9:40,278,101...40,351,576 		JBrowse link
G Rev3l REV3 like, DNA directed polymerase zeta catalytic subunit acts_upstream_of_or_within
involved_in		 ISO
IEA		 MGI:2183197 (PMID:11884603)
GO_REF:0000002
GO_REF:0000043
GO_REF:0000107		 RGD
InterPro
UniProt
Ensembl		 PMID:11884603 GO_REF:0000002 GO_REF:0000043 GO_REF:0000107 NCBI chr20:44,686,482...44,844,668
Ensembl chr20:43,132,363...43,290,099 		JBrowse link
G Rexo4 REX4 homolog, 3'-5' exonuclease involved_in ISO
IEA		 (PMID:21602889)
GO_REF:0000107		 RGD
Ensembl		 PMID:21602889 GO_REF:0000107 NCBI chr 3:30,678,729...30,692,376
Ensembl chr 3:10,280,654...10,290,996 		JBrowse link
G Rfc1 replication factor C subunit 1 involved_in IEA GO_REF:0000002 InterPro GO_REF:0000002 NCBI chr14:43,319,768...43,395,028
Ensembl chr14:42,966,324...43,041,370 		JBrowse link
G Rfc2 replication factor C subunit 2 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr12:27,756,920...27,770,049
Ensembl chr12:22,120,010...22,133,557 		JBrowse link
G Rfc3 replication factor C subunit 3 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr12:5,836,546...5,847,331
Ensembl chr12:1,000,994...1,011,778 		JBrowse link
G Rfc4 replication factor C subunit 4 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr11:91,254,273...91,268,727
Ensembl chr11:77,749,638...77,764,122 		JBrowse link
G Rfc5 replication factor C subunit 5 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr12:44,868,322...44,877,879
Ensembl chr12:39,207,484...39,217,312 		JBrowse link
G RFFL ring finger and FYVE like domain containing E3 ubiquitin protein ligase involved_in IEA InterPro
UniProt		 GO_REF:0000002 GO_REF:0000043 GO_REF:0000117
G Rfwd3 ring finger and WD repeat domain 3 involved_in IEA GO_REF:0000043 UniProt GO_REF:0000043 NCBI chr19:56,145,221...56,177,871
Ensembl chr19:39,236,787...39,268,479 		JBrowse link
G Rhno1 RAD9-HUS1-RAD1 interacting nuclear orphan 1 involved_in IEA GO_REF:0000043 UniProt GO_REF:0000043 NCBI chr 4:163,320,141...163,325,527
Ensembl chr 4:161,634,048...161,639,371 		JBrowse link
G Rmi2 RecQ mediated genome instability 2 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr10:5,336,269...5,344,202
Ensembl chr10:4,830,553...4,837,235 		JBrowse link
G Rnf138 ring finger protein 138 involved_in IEA GO_REF:0000043 UniProt GO_REF:0000043 NCBI chr18:12,291,557...12,315,931
Ensembl chr18:12,291,590...12,315,930 		JBrowse link
G Rnf168 ring finger protein 168 involved_in IEA GO_REF:0000043 UniProt GO_REF:0000043 NCBI chr11:81,991,352...82,013,306
Ensembl chr11:68,486,321...68,508,277 		JBrowse link
G Rnf8 ring finger protein 8 involved_in IEA GO_REF:0000043 UniProt GO_REF:0000043 NCBI chr20:7,683,890...7,708,437
Ensembl chr20:7,682,322...7,708,491 		JBrowse link
G Rpa1 replication protein A1 involved_in ISO
IEA		 (PMID:18469000), (PMID:20545304)
GO_REF:0000107
GO_REF:0000002		 RGD
Ensembl
InterPro		 PMID:18469000 PMID:20545304 GO_REF:0000002 GO_REF:0000107 NCBI chr10:60,647,185...60,698,279
Ensembl chr10:60,148,793...60,199,949 		JBrowse link
G Rpa2 replication protein A2 involved_in IEA GO_REF:0000002
GO_REF:0000043		 InterPro
UniProt		 GO_REF:0000002 GO_REF:0000043 NCBI chr 5:150,260,668...150,271,329
Ensembl chr 5:144,976,748...144,987,350 		JBrowse link
G Rpa3 replication protein A3 involved_in ISO
IEA		 (PMID:20545304)
GO_REF:0000002		 RGD
InterPro		 PMID:20545304 GO_REF:0000002 NCBI chr 4:37,270,966...37,273,997
Ensembl chr 4:36,304,651...36,307,709 		JBrowse link
G Rpa3l1 replication protein A3 like 1 involved_in IEA GO_REF:0000002 InterPro GO_REF:0000002 NCBI chr12:45,908,653...45,909,063
Ensembl chr12:45,908,683...45,909,048 		JBrowse link
G Rps3 ribosomal protein S3 involved_in ISO
IEA		 (PMID:19059439)
GO_REF:0000043		 RGD
UniProt		 PMID:19059439 GO_REF:0000043 NCBI chr 1:163,190,476...163,195,885
Ensembl chr 1:153,777,472...153,783,680 		JBrowse link
G Rrm1 ribonucleotide reductase catalytic subunit M1 involved_in ISO
IEA		 (PMID:11719458)
GO_REF:0000107		 RGD
Ensembl		 PMID:11719458 GO_REF:0000107 NCBI chr 1:166,235,904...166,260,206
Ensembl chr 1:156,823,960...156,848,261 		JBrowse link
G Rrm2b ribonucleotide reductase regulatory TP53 inducible subunit M2B involved_in
acts_upstream_of_or_within		 ISO
IEA		 (PMID:11719458)
GO_REF:0000107
MGI:2672883 (PMID:12858174)		 RGD
Ensembl		 PMID:11719458 PMID:12858174 GO_REF:0000107 NCBI chr 7:70,962,008...70,993,726
Ensembl chr 7:69,078,291...69,108,633 		JBrowse link
G Rtel1 regulator of telomere elongation helicase 1 involved_in IEA GO_REF:0000104
GO_REF:0000002
GO_REF:0000043		 UniProt
InterPro		 GO_REF:0000002 GO_REF:0000043 GO_REF:0000104 NCBI chr 3:188,778,329...188,842,877
Ensembl chr 3:168,419,579...168,465,348 		JBrowse link
G Ruvbl1 RuvB-like AAA ATPase 1 involved_in IEA GO_REF:0000043 UniProt GO_REF:0000043 NCBI chr 4:122,489,754...122,524,666
Ensembl chr 4:120,932,417...121,029,384 		JBrowse link
G Ruvbl1-ps1 RuvB-like AAA ATPase 1, pseudogene 1 involved_in IEA GO_REF:0000043 UniProt GO_REF:0000043 NCBI chr  X:1,640,138...1,641,886
Ensembl chr  X:1,640,300...1,641,811 		JBrowse link
G Ruvbl2 RuvB-like AAA ATPase 2 involved_in IEA GO_REF:0000043 UniProt GO_REF:0000043 NCBI chr 1:105,038,487...105,051,851
Ensembl chr 1:95,901,701...95,915,342 		JBrowse link
G Samhd1 SAM and HD domain containing deoxynucleoside triphosphate triphosphohydrolase 1 involved_in IEA GO_REF:0000043 UniProt GO_REF:0000043 NCBI chr 3:166,179,742...166,214,448
Ensembl chr 3:145,761,558...145,794,386 		JBrowse link
G Sfr1 SWI5-dependent homologous recombination repair protein 1 involved_in IEA GO_REF:0000043 UniProt GO_REF:0000043 NCBI chr 1:256,560,533...256,564,547
Ensembl chr 1:246,597,044...246,623,250 		JBrowse link
G Sirt7 sirtuin 7 involved_in IEA GO_REF:0000043 UniProt GO_REF:0000043 NCBI chr10:106,394,802...106,401,627
Ensembl chr10:105,896,476...105,903,172 		JBrowse link
G Slc25a16 solute carrier family 25 member 16 involved_in IEA GO_REF:0000043 UniProt GO_REF:0000043 NCBI chr20:25,659,847...25,717,080
Ensembl chr20:25,662,055...25,716,319 		JBrowse link
G Slx1b SLX1 homolog B, structure-specific endonuclease subunit involved_in ISO
IEA		 (PMID:19595721), (PMID:19595722), (PMID:19596235), (PMID:19596236)
GO_REF:0000043
GO_REF:0000002
GO_REF:0000104		 RGD
UniProt
InterPro		 PMID:19595721 PMID:19595722 PMID:19596235 PMID:19596236 GO_REF:0000002 GO_REF:0000043 GO_REF:0000104 NCBI chr 1:181,286,190...181,291,739
Ensembl chr 1:181,283,921...181,291,775 		JBrowse link
G Slx4 SLX4 structure-specific endonuclease subunit involved_in ISO
IEA		 (PMID:19595722)
GO_REF:0000002
GO_REF:0000043
GO_REF:0000107		 RGD
InterPro
UniProt
Ensembl		 PMID:19595722 GO_REF:0000002 GO_REF:0000043 GO_REF:0000107 NCBI chr10:12,032,131...12,055,685
Ensembl chr10:11,528,424...11,549,295 		JBrowse link
G Smarca5 SNF2 related chromatin remodeling ATPase 5 involved_in ISO
IEA		 (PMID:23911928)
GO_REF:0000107		 RGD
Ensembl		 PMID:23911928 GO_REF:0000107 NCBI chr19:44,172,465...44,208,967
Ensembl chr19:27,271,148...27,304,594 		JBrowse link
G Smarcad1 SNF2 related chromatin remodeling ATPase with DExD box 1 involved_in IEA GO_REF:0000043 UniProt GO_REF:0000043 NCBI chr 4:94,311,441...94,379,184
Ensembl chr 4:94,311,489...94,372,563 		JBrowse link
G Smarcal1 SNF2 related chromatin remodeling annealing helicase 1 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr 9:74,239,718...74,286,156
Ensembl chr 9:74,240,241...74,286,146 		JBrowse link
G Smc1a structural maintenance of chromosomes 1A involved_in IEA GO_REF:0000043 UniProt GO_REF:0000043 NCBI chr  X:24,582,732...24,627,462
Ensembl chr  X:21,103,282...21,148,056 		JBrowse link
G Smc3 structural maintenance of chromosomes 3 involved_in IEA GO_REF:0000043 UniProt GO_REF:0000043 NCBI chr 1:262,606,731...262,649,832
Ensembl chr 1:252,601,753...252,644,522 		JBrowse link
G Smc6 structural maintenance of chromosomes 6 involved_in IEA GO_REF:0000043 UniProt GO_REF:0000043 NCBI chr 6:39,697,810...39,752,275
Ensembl chr 6:33,978,716...34,031,746 		JBrowse link
G Smug1 single-strand-selective monofunctional uracil-DNA glycosylase 1 involved_in IDA
IEA		 GO_REF:0000043 UniProt
RGD		 PMID:12718542 GO_REF:0000043, RGD:2317001 NCBI chr 7:134,288,565...134,302,179
Ensembl chr 7:134,287,675...134,297,226 		JBrowse link
G Sprtn SprT-like N-terminal domain involved_in IEA GO_REF:0000043
GO_REF:0000002		 UniProt
InterPro		 GO_REF:0000002 GO_REF:0000043 NCBI chr19:52,857,612...52,864,864
Ensembl chr19:52,857,866...52,864,864 		JBrowse link
G Ssrp1 structure specific recognition protein 1 involved_in IEA GO_REF:0000043 UniProt GO_REF:0000043 NCBI chr 3:90,531,024...90,541,132
Ensembl chr 3:70,118,655...70,134,482 		JBrowse link
G Stub1 STIP1 homology and U-box containing protein 1 involved_in IEA GO_REF:0000043 UniProt GO_REF:0000043 NCBI chr10:15,355,278...15,357,559
Ensembl chr10:14,850,765...14,853,046 		JBrowse link
G Supt16h SPT16 homolog, facilitates chromatin remodeling subunit involved_in IEA GO_REF:0000104
GO_REF:0000043		 UniProt GO_REF:0000043 GO_REF:0000104 NCBI chr15:27,341,196...27,378,314
Ensembl chr15:24,866,489...24,904,846 		JBrowse link
G Swi5 SWI5 homologous recombination repair protein involved_in IEA GO_REF:0000043 UniProt GO_REF:0000043 NCBI chr 3:15,574,687...15,583,760
Ensembl chr 3:15,564,715...15,583,805 		JBrowse link
G Taok1 TAO kinase 1 involved_in IEA GO_REF:0000043 UniProt GO_REF:0000043 NCBI chr10:62,871,198...62,989,049
Ensembl chr10:62,381,404...62,465,766 		JBrowse link
G Taok3 TAO kinase 3 involved_in IEA GO_REF:0000043 UniProt GO_REF:0000043 NCBI chr12:44,973,180...45,134,439
Ensembl chr12:39,314,027...39,461,244 		JBrowse link
G Tdg thymine-DNA glycosylase involved_in IEA GO_REF:0000043 UniProt GO_REF:0000043 NCBI chr 7:22,965,388...22,990,311
Ensembl chr 7:21,077,853...21,097,567 		JBrowse link
G Tdp1 tyrosyl-DNA phosphodiesterase 1 involved_in
acts_upstream_of_or_within		 ISO
IEA
IBA		 (PMID:17948061)
GO_REF:0000002
(PMID:21390131)
GO_REF:0000033
GO_REF:0000043		 RGD
InterPro
GO_Central
UniProt		 PMID:17948061 PMID:21390131 GO_REF:0000002 GO_REF:0000033 GO_REF:0000043 NCBI chr 6:124,892,821...124,960,646
Ensembl chr 6:119,163,166...119,231,021 		JBrowse link
G Tdp2 tyrosyl-DNA phosphodiesterase 2 involved_in IEA GO_REF:0000043 UniProt GO_REF:0000043 NCBI chr17:40,228,943...40,240,337
Ensembl chr17:40,228,947...40,240,313 		JBrowse link
G Tfpt TCF3 fusion partner involved_in IEA GO_REF:0000043 UniProt GO_REF:0000043 NCBI chr 1:74,502,994...74,512,766
Ensembl chr 1:65,582,359...65,611,689 		JBrowse link
G Timeless timeless circadian regulator involved_in IBA
IEA		 GO_REF:0000033
GO_REF:0000043		 GO_Central
UniProt		 GO_REF:0000033 GO_REF:0000043 NCBI chr 7:1,239,388...1,263,344
Ensembl chr 7:654,822...678,738 		JBrowse link
G Tonsl tonsoku-like, DNA repair protein involved_in IEA GO_REF:0000043 UniProt GO_REF:0000043 NCBI chr 7:110,226,696...110,241,459
Ensembl chr 7:108,346,047...108,360,750 		JBrowse link
G Top3a DNA topoisomerase III alpha involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr10:45,419,219...45,457,356
Ensembl chr10:45,419,217...45,457,559 		JBrowse link
G Top3b DNA topoisomerase III beta involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr11:84,097,018...84,125,474
Ensembl chr11:84,097,026...84,125,392 		JBrowse link
G Tp53bp1 tumor protein p53 binding protein 1 acts_upstream_of_or_within ISO
IEA		 (PMID:15364958)
GO_REF:0000107		 RGD
Ensembl		 PMID:15364958 GO_REF:0000107 NCBI chr 3:128,620,320...128,724,716
Ensembl chr 3:108,169,980...108,269,822 		JBrowse link
G Trim28 tripartite motif-containing 28 involved_in ISO
IEA		 (PMID:17178852)
GO_REF:0000107		 RGD
Ensembl		 PMID:17178852 GO_REF:0000107 NCBI chr 1:82,724,842...82,731,566
Ensembl chr 1:73,652,709...73,659,380 		JBrowse link
G Trip12 thyroid hormone receptor interactor 12 involved_in IEA GO_REF:0000043 UniProt GO_REF:0000043 NCBI chr 9:93,364,791...93,491,015
Ensembl chr 9:85,916,691...86,051,403 		JBrowse link
G Ttc5 tetratricopeptide repeat domain 5 involved_in IEA GO_REF:0000043 UniProt GO_REF:0000043 NCBI chr15:23,993,046...24,010,710
Ensembl chr15:23,993,048...24,010,668 		JBrowse link
G Ttf2 transcription termination factor 2 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr 2:191,054,942...191,086,331
Ensembl chr 2:188,366,331...188,397,689 		JBrowse link
G Ube2a ubiquitin-conjugating enzyme E2A involved_in ISO
IEA
IBA		 UniProtKB:P06104 (PMID:1717990)
GO_REF:0000107
GO_REF:0000033		 RGD
Ensembl
GO_Central		 PMID:1717990 GO_REF:0000033 GO_REF:0000107 NCBI chr  X:116,114,339...116,125,076
Ensembl chr  X:116,113,875...116,125,070 		JBrowse link
G Ube2b ubiquitin-conjugating enzyme E2B involved_in ISO
IEA
IBA		 UniProtKB:P06104 (PMID:1717990)
GO_REF:0000043
GO_REF:0000107
GO_REF:0000033		 RGD
UniProt
Ensembl
GO_Central		 PMID:1717990 GO_REF:0000033 GO_REF:0000043 GO_REF:0000107 NCBI chr10:36,749,365...36,764,335
Ensembl chr10:36,248,438...36,264,665 		JBrowse link
G Ube2d3 ubiquitin-conjugating enzyme E2D 3 involved_in IEA GO_REF:0000043 UniProt GO_REF:0000043 NCBI chr 2:226,543,194...226,571,001
Ensembl chr 2:223,868,730...223,898,081 		JBrowse link
G Ube2n ubiquitin-conjugating enzyme E2N involved_in IEA GO_REF:0000043 UniProt GO_REF:0000043 NCBI chr 7:32,041,190...32,071,252
Ensembl chr 7:30,154,616...30,184,355 		JBrowse link
G Ube2t ubiquitin-conjugating enzyme E2T involved_in ISO
IEA		 (PMID:16916645)
GO_REF:0000107		 RGD
Ensembl		 PMID:16916645 GO_REF:0000107 NCBI chr13:48,955,166...48,965,668
Ensembl chr13:46,403,375...46,414,835 		JBrowse link
G Ube2u ubiquitin conjugating enzyme E2 U involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr 5:115,118,234...115,187,296
Ensembl chr 5:115,118,495...115,186,874 		JBrowse link
G Ube2w ubiquitin-conjugating enzyme E2W involved_in IEA GO_REF:0000043 UniProt GO_REF:0000043 NCBI chr 5:2,690,742...2,754,491
Ensembl chr 5:2,690,763...2,814,965 		JBrowse link
G Ubr5 ubiquitin protein ligase E3 component n-recognin 5 involved_in IEA GO_REF:0000043 UniProt GO_REF:0000043 NCBI chr 7:71,000,197...71,109,841
Ensembl chr 7:69,116,761...69,224,903 		JBrowse link
G Ufl1 Ufm1-specific ligase 1 involved_in IEA GO_REF:0000043 UniProt GO_REF:0000043 NCBI chr 5:43,759,271...43,791,682
Ensembl chr 5:38,962,171...38,995,199 		JBrowse link
G Uhrf1 ubiquitin-like with PHD and ring finger domains 1 involved_in IEA GO_REF:0000043 UniProt GO_REF:0000043 NCBI chr 9:1,220,162...1,241,792
Ensembl chr 9:1,134,909...1,154,631 		JBrowse link
G Uimc1 ubiquitin interaction motif containing 1 involved_in IEA GO_REF:0000002
GO_REF:0000043		 InterPro
UniProt		 GO_REF:0000002 GO_REF:0000043 NCBI chr17:9,528,923...9,597,967
Ensembl chr17:9,527,794...9,592,799 		JBrowse link
G Ung uracil-DNA glycosylase involved_in TAS
IEA		 GO_REF:0000043
GO_REF:0000002		 UniProt
InterPro
RGD		 PMID:12167490 GO_REF:0000002 GO_REF:0000043, RGD:634481 NCBI chr12:48,145,838...48,154,789
Ensembl chr12:42,485,276...42,494,206 		JBrowse link
G Upf1 UPF1, RNA helicase and ATPase involved_in ISO
IEA		 (PMID:16488880)
GO_REF:0000107		 RGD
Ensembl		 PMID:16488880 GO_REF:0000107 NCBI chr16:19,110,531...19,131,327
Ensembl chr16:19,076,322...19,096,568 		JBrowse link
G Usp1 ubiquitin specific peptidase 1 involved_in IEA GO_REF:0000043 UniProt GO_REF:0000043 NCBI chr 5:118,703,056...118,714,426
Ensembl chr 5:113,587,564...113,598,932 		JBrowse link
G Usp10 ubiquitin specific peptidase 10 involved_in IEA GO_REF:0000043 UniProt GO_REF:0000043 NCBI chr19:47,972,858...48,014,900
Ensembl chr19:47,972,611...48,014,897 		JBrowse link
G Usp28 ubiquitin specific peptidase 28 involved_in IEA GO_REF:0000043 UniProt GO_REF:0000043 NCBI chr 8:49,325,766...49,386,229
Ensembl chr 8:49,325,867...49,386,229 		JBrowse link
G Usp3 ubiquitin specific peptidase 3 involved_in ISO (PMID:17980597) RGD PMID:17980597 NCBI chr 8:75,973,278...76,049,151
Ensembl chr 8:67,079,927...67,154,111 		JBrowse link
G Usp45 ubiquitin specific peptidase 45 acts_upstream_of_or_within ISO
IEA		 (PMID:25538220)
GO_REF:0000107		 RGD
Ensembl		 PMID:25538220 GO_REF:0000107 NCBI chr 5:40,115,394...40,188,861
Ensembl chr 5:35,318,635...35,389,420 		JBrowse link
G Usp7 ubiquitin specific peptidase 7 involved_in IEA GO_REF:0000043 UniProt GO_REF:0000043 NCBI chr10:7,335,508...7,432,018
Ensembl chr10:6,828,795...6,925,355 		JBrowse link
G Uvrag UV radiation resistance associated involved_in ISO
IEA		 (PMID:22542840)
GO_REF:0000107		 RGD
Ensembl		 PMID:22542840 GO_REF:0000107 NCBI chr 1:162,596,514...162,854,348
Ensembl chr 1:153,185,395...153,442,136 		JBrowse link
G Uvssa UV-stimulated scaffold protein A involved_in IEA GO_REF:0000043 UniProt GO_REF:0000043 NCBI chr14:77,309,188...77,351,922
Ensembl chr14:77,314,056...77,351,903 		JBrowse link
G Vcp valosin-containing protein involved_in ISS
IEA		 GO_REF:0000024
GO_REF:0000043		 UniProt GO_REF:0000024 GO_REF:0000043 NCBI chr 5:62,005,984...62,025,387
Ensembl chr 5:57,210,168...57,229,571 		JBrowse link
G Vcpip1 valosin containing protein interacting protein 1 involved_in IEA GO_REF:0000043 UniProt GO_REF:0000043 NCBI chr 5:9,534,247...9,560,889
Ensembl chr 5:9,534,129...9,562,040 		JBrowse link
G Wdhd1 WD repeat and HMG-box DNA binding protein 1 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr15:22,957,492...23,002,820
Ensembl chr15:20,489,291...20,523,096 		JBrowse link
G Wrap53 WD repeat containing, antisense to TP53 involved_in IEA GO_REF:0000043 UniProt GO_REF:0000043 NCBI chr10:54,780,873...54,797,919
Ensembl chr10:54,282,105...54,298,929 		JBrowse link
G Wrn WRN RecQ like helicase involved_in IEA GO_REF:0000002 InterPro GO_REF:0000002 NCBI chr16:65,466,552...65,602,951
Ensembl chr16:58,763,504...58,895,450 		JBrowse link
G Wrnip1 WRN helicase interacting protein 1 involved_in IEA GO_REF:0000043
GO_REF:0000002		 UniProt
InterPro		 GO_REF:0000002 GO_REF:0000043 NCBI chr17:31,830,159...31,850,408
Ensembl chr17:31,621,411...31,641,659 		JBrowse link
G Xab2 XPA binding protein 2 involved_in IEA GO_REF:0000043 UniProt GO_REF:0000043 NCBI chr12:6,465,569...6,477,616
Ensembl chr12:1,667,672...1,679,692 		JBrowse link
G Xpa XPA, DNA damage recognition and repair factor involved_in
acts_upstream_of_or_within		 ISO
IEA		 (PMID:1601884)
GO_REF:0000043
MGI:1857939 (PMID:11950998), (PMID:9661901)		 RGD
UniProt		 PMID:1601884 PMID:9661901 PMID:11950998 GO_REF:0000043 NCBI chr 5:65,227,281...65,275,784
Ensembl chr 5:60,431,673...60,475,726 		JBrowse link
G Xpc XPC complex subunit, DNA damage recognition and repair factor acts_upstream_of_or_within
involved_in		 ISO
IEA		 MGI:1859840 (PMID:12555660)
GO_REF:0000107
GO_REF:0000117
GO_REF:0000043		 RGD
Ensembl
UniProt		 PMID:12555660 GO_REF:0000043 GO_REF:0000107 GO_REF:0000117 NCBI chr 4:125,550,833...125,578,084
Ensembl chr 4:123,993,666...124,021,010 		JBrowse link
G Xrcc1 X-ray repair cross complementing 1 acts_upstream_of_or_within
involved_in		 ISO
IEA		 MGI:3836442 (PMID:19633665)
GO_REF:0000107
GO_REF:0000043		 RGD
Ensembl
UniProt		 PMID:19633665 GO_REF:0000043 GO_REF:0000107 NCBI chr 1:89,268,721...89,296,619
Ensembl chr 1:80,141,207...80,168,701 		JBrowse link
G Xrcc2 X-ray repair cross complementing 2 involved_in ISO
IEA		 (PMID:10422536)
GO_REF:0000107
GO_REF:0000002		 RGD
Ensembl
InterPro		 PMID:10422536 GO_REF:0000002 GO_REF:0000107 NCBI chr 4:10,157,130...10,237,089
Ensembl chr 4:9,423,898...9,442,482 		JBrowse link
G Xrcc3 X-ray repair cross complementing 3 involved_in ISO
IEA		 (PMID:10422536)
GO_REF:0000107
GO_REF:0000043
GO_REF:0000002		 RGD
Ensembl
UniProt
InterPro		 PMID:10422536 GO_REF:0000002 GO_REF:0000043 GO_REF:0000107 NCBI chr 6:136,684,558...136,694,822
Ensembl chr 6:130,863,959...130,872,444 		JBrowse link
G Xrcc4 X-ray repair cross complementing 4 involved_in IEA GO_REF:0000043 UniProt GO_REF:0000043 NCBI chr 2:22,686,506...22,932,929
Ensembl chr 2:20,951,200...21,197,808 		JBrowse link
G Xrcc5 X-ray repair cross complementing 5 involved_in IEA GO_REF:0000043
GO_REF:0000104		 UniProt GO_REF:0000043 GO_REF:0000104 NCBI chr 9:81,404,507...81,493,293
Ensembl chr 9:73,955,216...74,044,018 		JBrowse link
G Xrcc6 X-ray repair cross complementing 6 involved_in IEA GO_REF:0000043 UniProt GO_REF:0000043 NCBI chr 7:115,423,026...115,443,884
Ensembl chr 7:113,543,057...113,563,762 		JBrowse link
G Zbtb1 zinc finger and BTB domain containing 1 involved_in ISO
IEA		 (PMID:24657165)
GO_REF:0000107		 RGD
Ensembl		 PMID:24657165 GO_REF:0000107 NCBI chr 6:100,832,506...100,864,019
Ensembl chr 6:95,096,387...95,118,996 		JBrowse link
G Zfp668 zinc finger protein 668 involved_in ISO (PMID:34313816) RGD PMID:34313816 NCBI chr 1:182,474,633...182,484,957
Ensembl chr 1:182,474,633...182,492,878 		JBrowse link
G Zfyve26 zinc finger FYVE-type containing 26 involved_in IEA GO_REF:0000043 UniProt GO_REF:0000043 NCBI chr 6:98,031,874...98,095,538
Ensembl chr 6:98,032,520...98,095,480 		JBrowse link
G Zmpste24 zinc metallopeptidase STE24 acts_upstream_of_or_within ISO
IEA		 MGI:1931221|MGI:2180033 (PMID:15980864), (PMID:21746928)
GO_REF:0000107		 RGD
Ensembl		 PMID:15980864 PMID:21746928 GO_REF:0000107 NCBI chr 5:139,912,395...139,945,532
Ensembl chr 5:134,627,229...134,660,110 		JBrowse link
G Zranb3 zinc finger RANBP2-type containing 3 involved_in ISO
IBA		 (PMID:22759634)
GO_REF:0000033		 RGD
GO_Central		 PMID:22759634 GO_REF:0000033 NCBI chr13:41,993,110...42,148,298
Ensembl chr13:39,440,889...39,595,670 		JBrowse link
base-excision repair term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Apex1 apurinic/apyrimidinic endodeoxyribonuclease 1 involved_in ISO
IEA
IBA		 (PMID:8932386)
GO_REF:0000107
GO_REF:0000033		 RGD
Ensembl
GO_Central		 PMID:8932386 GO_REF:0000033 GO_REF:0000107 NCBI chr15:26,618,146...26,620,330
Ensembl chr15:24,144,362...24,146,785 		JBrowse link
G Apex2 apurinic/apyrimidinic endodeoxyribonuclease 2 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr  X:22,914,943...22,937,713
Ensembl chr  X:19,487,419...19,508,439 		JBrowse link
G Apex2l1 APEX nuclease (apurinic/apyrimidinic endonuclease) 2-like 1 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr14:67,166,252...67,168,138
Ensembl chr14:67,166,530...67,168,080 		JBrowse link
G Dna2 DNA replication helicase/nuclease 2 involved_in IEA
ISS		 GO_REF:0000107
GO_REF:0000024		 Ensembl
UniProt		 GO_REF:0000024 GO_REF:0000107 NCBI chr20:25,660,339...25,689,285
Ensembl chr20:25,662,055...25,716,319 		JBrowse link
G ENSRNOG00000063954 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 Ensembl chr 5:82,622,228...82,672,833 JBrowse link
G Ercc6 ERCC excision repair 6, chromatin remodeling factor involved_in ISO
IEA		 (PMID:9973627)
GO_REF:0000107		 RGD
Ensembl		 PMID:9973627 GO_REF:0000107 NCBI chr16:7,771,311...7,841,895
Ensembl chr16:7,765,013...7,835,587 		JBrowse link
G Fen1 flap structure-specific endonuclease 1 involved_in IEA GO_REF:0000104 UniProt GO_REF:0000104 NCBI chr 1:216,270,016...216,274,873
Ensembl chr 1:206,844,884...206,850,003 		JBrowse link
G Hmga1 high mobility group AT-hook 1 involved_in ISO (PMID:19465398) RGD PMID:19465398 NCBI chr20:5,612,902...5,620,596
Ensembl chr20:5,611,694...5,618,752 		JBrowse link
G Hmga2 high mobility group AT-hook 2 involved_in ISO
IEA
ISS		 (PMID:19465398)
GO_REF:0000107
GO_REF:0000024		 RGD
Ensembl
UniProt		 PMID:19465398 GO_REF:0000024 GO_REF:0000107 NCBI chr 7:57,762,710...57,884,555
Ensembl chr 7:55,880,112...55,994,784 		JBrowse link
G Hmgb1 high mobility group box 1 involved_in ISO (PMID:17803946) RGD PMID:17803946 NCBI chr12:11,009,236...11,015,941
Ensembl chr12:5,901,586...5,978,565
Ensembl chr16:5,901,586...5,978,565 		JBrowse link
G Huwe1 HECT, UBA and WWE domain containing E3 ubiquitin protein ligase 1 involved_in ISS
IBA
ISO		 GO_REF:0000024
GO_REF:0000033
(PMID:19713937)		 UniProt
GO_Central
RGD		 PMID:19713937 GO_REF:0000024 GO_REF:0000033 NCBI chr  X:20,873,795...21,001,378
Ensembl chr  X:20,873,795...21,001,262 		JBrowse link
G Lig1 DNA ligase 1 involved_in ISO
IEA		 (PMID:19589734)
GO_REF:0000107		 RGD
Ensembl		 PMID:19589734 GO_REF:0000107 NCBI chr 1:83,243,043...83,281,707
Ensembl chr 1:74,165,842...74,204,413 		JBrowse link
G Lig3 DNA ligase 3 involved_in ISO
IEA		 (PMID:19589734)
GO_REF:0000107
(PMID:24674627)		 RGD
Ensembl		 PMID:19589734 PMID:24674627 GO_REF:0000107 NCBI chr10:68,215,371...68,238,705
Ensembl chr10:67,717,812...67,798,414 		JBrowse link
G Lig4 DNA ligase 4 involved_in ISO (PMID:19589734) RGD PMID:19589734 NCBI chr16:86,220,345...86,228,930
Ensembl chr16:79,518,312...79,527,040 		JBrowse link
G Mpg N-methylpurine-DNA glycosylase involved_in
acts_upstream_of_or_within		 IBA
IEA
ISO		 GO_REF:0000033
GO_REF:0000002
GO_REF:0000107
MGI:2148592|MGI:2675730 (PMID:15177041), (PMID:9371767)		 GO_Central
InterPro
Ensembl
RGD		 PMID:9371767 PMID:15177041 GO_REF:0000002 GO_REF:0000033 GO_REF:0000107 NCBI chr10:15,396,246...15,402,528
Ensembl chr10:15,395,782...15,402,520 		JBrowse link
G Mutyh mutY DNA glycosylase involved_in IEA
IBA		 GO_REF:0000104
GO_REF:0000002
GO_REF:0000033		 UniProt
InterPro
GO_Central		 GO_REF:0000002 GO_REF:0000033 GO_REF:0000104 NCBI chr 5:135,510,666...135,522,777
Ensembl chr 5:130,274,122...130,286,146 		JBrowse link
G Neil1 nei-like DNA glycosylase 1 involved_in ISO
IEA		 (PMID:17611195)
GO_REF:0000107
GO_REF:0000002		 RGD
Ensembl
InterPro		 PMID:17611195 GO_REF:0000002 GO_REF:0000107 NCBI chr 8:66,446,106...66,452,844
Ensembl chr 8:57,550,147...57,556,258 		JBrowse link
G Neil2 nei-like DNA glycosylase 2 involved_in IEA GO_REF:0000002 InterPro GO_REF:0000002 NCBI chr15:41,620,650...41,631,551
Ensembl chr15:37,445,381...37,454,863 		JBrowse link
G Neil3 nei-like DNA glycosylase 3 involved_in ISO
IEA
IBA		 (PMID:23755964)
GO_REF:0000002
GO_REF:0000107
(PMID:20185759)
GO_REF:0000033		 RGD
InterPro
Ensembl
GO_Central		 PMID:20185759 PMID:23755964 GO_REF:0000002 GO_REF:0000033 GO_REF:0000107 NCBI chr16:45,091,401...45,151,419
Ensembl chr16:38,359,371...38,418,527 		JBrowse link
G Nthl1 nth-like DNA glycosylase 1 involved_in IEA GO_REF:0000002 InterPro GO_REF:0000002 NCBI chr10:14,160,334...14,166,502
Ensembl chr10:13,655,785...13,661,957 		JBrowse link
G Ogg1 8-oxoguanine DNA glycosylase involved_in
acts_upstream_of_or_within		 IDA
IEA
ISO		 GO_REF:0000002
MGI:2386943 (PMID:10570187), (PMID:9207108)		 InterPro
RGD		 PMID:9207108 PMID:10570187 PMID:9801319 GO_REF:0000002, RGD:729091 NCBI chr 4:148,030,237...148,037,599
Ensembl chr 4:146,474,750...146,484,766 		JBrowse link
G Parp1 poly (ADP-ribose) polymerase 1 acts_upstream_of_or_within ISO (PMID:11948190) RGD PMID:11948190 NCBI chr13:94,839,484...94,871,295
Ensembl chr13:92,307,586...92,339,404 		JBrowse link
G Parp2 poly (ADP-ribose) polymerase 2 acts_upstream_of_or_within ISO (PMID:11948190) RGD PMID:11948190 NCBI chr15:24,034,069...24,044,340
Ensembl chr15:24,034,106...24,044,338 		JBrowse link
G Polb DNA polymerase beta involved_in TAS
IEA
IBA
ISS
ISO		 GO_REF:0000107
GO_REF:0000033
GO_REF:0000024
(PMID:16600869), (PMID:21362556)		 Ensembl
GO_Central
UniProt
RGD		 PMID:16600869 PMID:21362556 PMID:12388548 GO_REF:0000024 GO_REF:0000033 GO_REF:0000107, RGD:633643 NCBI chr16:76,081,903...76,105,174
Ensembl chr16:69,379,400...69,404,812 		JBrowse link
G Polg DNA polymerase gamma, catalytic subunit involved_in ISS
IEA
ISO		 GO_REF:0000024
GO_REF:0000107
(PMID:9770471)		 UniProt
Ensembl
RGD		 PMID:9770471 GO_REF:0000024 GO_REF:0000107 NCBI chr 1:142,792,119...142,808,933
Ensembl chr 1:133,382,766...133,398,567 		JBrowse link
G Polq DNA polymerase theta involved_in ISO
IEA		 (PMID:19188258)
GO_REF:0000107		 RGD
Ensembl		 PMID:19188258 GO_REF:0000107 NCBI chr11:77,179,190...77,281,270
Ensembl chr11:63,673,816...63,775,878 		JBrowse link
G Rpa1 replication protein A1 involved_in ISO
IEA		 (PMID:9765279)
GO_REF:0000107		 RGD
Ensembl		 PMID:9765279 GO_REF:0000107 NCBI chr10:60,647,185...60,698,279
Ensembl chr10:60,148,793...60,199,949 		JBrowse link
G Rpa2 replication protein A2 involved_in ISO
ISS		 (PMID:9765279)
GO_REF:0000024		 RGD
UniProt		 PMID:9765279 GO_REF:0000024 NCBI chr 5:150,260,668...150,271,329
Ensembl chr 5:144,976,748...144,987,350 		JBrowse link
G Rpa3 replication protein A3 involved_in ISO
IBA		 (PMID:9765279)
GO_REF:0000033		 RGD
GO_Central		 PMID:9765279 GO_REF:0000033 NCBI chr 4:37,270,966...37,273,997
Ensembl chr 4:36,304,651...36,307,709 		JBrowse link
G Rpa3l1 replication protein A3 like 1 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr12:45,908,653...45,909,063
Ensembl chr12:45,908,683...45,909,048 		JBrowse link
G Rps3 ribosomal protein S3 involved_in ISO (PMID:15518571) RGD PMID:15518571 NCBI chr 1:163,190,476...163,195,885
Ensembl chr 1:153,777,472...153,783,680 		JBrowse link
G Sirt6 sirtuin 6 involved_in ISO
IEA		 (PMID:16439206)
GO_REF:0000107		 RGD
Ensembl		 PMID:16439206 GO_REF:0000107 NCBI chr 7:8,733,056...8,738,543
Ensembl chr 7:8,082,364...8,098,914 		JBrowse link
G Slc25a16 solute carrier family 25 member 16 involved_in ISS
IEA		 GO_REF:0000024
GO_REF:0000107		 UniProt
Ensembl		 GO_REF:0000024 GO_REF:0000107 NCBI chr20:25,659,847...25,717,080
Ensembl chr20:25,662,055...25,716,319 		JBrowse link
G Smug1 single-strand-selective monofunctional uracil-DNA glycosylase 1 involved_in ISO
IEA
IDA		 (PMID:12161446)
GO_REF:0000002
PMID:12718543		 RGD
InterPro		 PMID:12161446 PMID:12718543 GO_REF:0000002, RGD:634191 NCBI chr 7:134,288,565...134,302,179
Ensembl chr 7:134,287,675...134,297,226 		JBrowse link
G Tdg thymine-DNA glycosylase involved_in ISO
IEA		 (PMID:21862836), (PMID:22327402), (PMID:22573813)
GO_REF:0000107
(PMID:21817016)		 RGD
Ensembl		 PMID:21817016 PMID:21862836 PMID:22327402 PMID:22573813 GO_REF:0000107 NCBI chr 7:22,965,388...22,990,311
Ensembl chr 7:21,077,853...21,097,567 		JBrowse link
G Ung uracil-DNA glycosylase involved_in IDA
IEA
ISO
TAS		 GO_REF:0000104
GO_REF:0000002
(PMID:12161446)		 UniProt
InterPro
RGD		 PMID:12161446 PMID:12167490 PMID:11292851 PMID:15297456 GO_REF:0000002 GO_REF:0000104, RGD:634481, RGD:1599704, RGD:1599703 NCBI chr12:48,145,838...48,154,789
Ensembl chr12:42,485,276...42,494,206 		JBrowse link
G Usp47 ubiquitin specific peptidase 47 involved_in ISO
IEA		 (PMID:21362556)
GO_REF:0000107		 RGD
Ensembl		 PMID:21362556 GO_REF:0000107 NCBI chr 1:175,586,758...175,669,904
Ensembl chr 1:166,152,199...166,235,312 		JBrowse link
G Wrn WRN RecQ like helicase involved_in ISO (PMID:17611195) RGD PMID:17611195 NCBI chr16:65,466,552...65,602,951
Ensembl chr16:58,763,504...58,895,450 		JBrowse link
G Xpa XPA, DNA damage recognition and repair factor involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr 5:65,227,281...65,275,784
Ensembl chr 5:60,431,673...60,475,726 		JBrowse link
G Xrcc1 X-ray repair cross complementing 1 involved_in TAS
IEA
ISO
IBA
IDA		 GO_REF:0000107
GO_REF:0000002
(PMID:19589734), (PMID:34102106), (PMID:34811483)
GO_REF:0000033		 Ensembl
InterPro
RGD
GO_Central		 PMID:19589734 PMID:34102106 PMID:34811483 PMID:11056294 PMID:17412650 GO_REF:0000002 GO_REF:0000033 GO_REF:0000107, RGD:727220, RGD:2302580 NCBI chr 1:89,268,721...89,296,619
Ensembl chr 1:80,141,207...80,168,701 		JBrowse link
G Xrcc4 X-ray repair cross complementing 4 involved_in ISO
IEA		 (PMID:19589734)
GO_REF:0000107		 RGD
Ensembl		 PMID:19589734 GO_REF:0000107 NCBI chr 2:22,686,506...22,932,929
Ensembl chr 2:20,951,200...21,197,808 		JBrowse link
base-excision repair, AP site formation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ercc5 ERCC excision repair 5, endonuclease involved_in ISO (PMID:9927729) RGD PMID:9927729 NCBI chr 9:46,309,477...46,354,478
Ensembl chr 9:46,309,389...46,354,472 		JBrowse link
G Nthl1 nth-like DNA glycosylase 1 involved_in ISO
IEA
IBA		 (PMID:15358233), (PMID:9927729)
GO_REF:0000002
GO_REF:0000104
GO_REF:0000107
GO_REF:0000033		 RGD
InterPro
UniProt
Ensembl
GO_Central		 PMID:9927729 PMID:15358233 GO_REF:0000002 GO_REF:0000033 GO_REF:0000104 GO_REF:0000107 NCBI chr10:14,160,334...14,166,502
Ensembl chr10:13,655,785...13,661,957 		JBrowse link
G Ogg1 8-oxoguanine DNA glycosylase involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr 4:148,030,237...148,037,599
Ensembl chr 4:146,474,750...146,484,766 		JBrowse link
G Tdg thymine-DNA glycosylase involved_in IBA
IEA		 GO_REF:0000033
GO_REF:0000002		 GO_Central
InterPro		 GO_REF:0000002 GO_REF:0000033 NCBI chr 7:22,965,388...22,990,311
Ensembl chr 7:21,077,853...21,097,567 		JBrowse link
base-excision repair, AP site formation via deaminated base removal term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ung uracil-DNA glycosylase involved_in ISO
IEA
IBA		 (PMID:18973764)
GO_REF:0000107
GO_REF:0000033		 RGD
Ensembl
GO_Central		 PMID:18973764 GO_REF:0000033 GO_REF:0000107 NCBI chr12:48,145,838...48,154,789
Ensembl chr12:42,485,276...42,494,206 		JBrowse link
base-excision repair, gap-filling term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Pcna proliferating cell nuclear antigen acts_upstream_of_or_within ISO
IEA		 (PMID:15177179)
GO_REF:0000107		 RGD
Ensembl		 PMID:15177179 GO_REF:0000107 NCBI chr 3:139,951,948...139,955,820
Ensembl chr 3:119,498,810...119,502,995 		JBrowse link
G Polb DNA polymerase beta acts_upstream_of_or_within ISO
IEA		 (PMID:15177179)
GO_REF:0000107		 RGD
Ensembl		 PMID:15177179 GO_REF:0000107 NCBI chr16:76,081,903...76,105,174
Ensembl chr16:69,379,400...69,404,812 		JBrowse link
G Pold1 DNA polymerase delta 1, catalytic subunit involved_in
acts_upstream_of_or_within		 ISO
IEA
IBA		 (PMID:10559260), (PMID:10559261)
GO_REF:0000107
(PMID:15177179)
GO_REF:0000033		 RGD
Ensembl
GO_Central		 PMID:10559260 PMID:10559261 PMID:15177179 GO_REF:0000033 GO_REF:0000107 NCBI chr 1:104,161,984...104,178,074
Ensembl chr 1:95,025,499...95,036,465 		JBrowse link
G Pole DNA polymerase epsilon, catalytic subunit involved_in ISO
IEA
IBA		 (PMID:10559260)
GO_REF:0000107
GO_REF:0000033		 RGD
Ensembl
GO_Central		 PMID:10559260 GO_REF:0000033 GO_REF:0000107 NCBI chr12:52,005,155...52,053,761
Ensembl chr12:46,345,420...46,393,939 		JBrowse link
G Polg DNA polymerase gamma, catalytic subunit acts_upstream_of_or_within ISO
IEA		 (PMID:15177179)
GO_REF:0000107		 RGD
Ensembl		 PMID:15177179 GO_REF:0000107 NCBI chr 1:142,792,119...142,808,933
Ensembl chr 1:133,382,766...133,398,567 		JBrowse link
G Poll DNA polymerase lambda involved_in ISO
IEA
ISS		 (PMID:19806195)
GO_REF:0000107
GO_REF:0000024		 RGD
Ensembl
UniProt		 PMID:19806195 GO_REF:0000024 GO_REF:0000107 NCBI chr 1:254,349,229...254,357,689
Ensembl chr 1:244,400,204...244,408,662 		JBrowse link
DNA alkylation repair term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Alkbh2 alkB homolog 2, alpha-ketoglutarate-dependent dioxygenase involved_in ISO
IEA
IBA		 (PMID:18432238), (PMID:20714506)
GO_REF:0000107
(PMID:18519673)
GO_REF:0000033		 RGD
Ensembl
GO_Central		 PMID:18432238 PMID:18519673 PMID:20714506 GO_REF:0000033 GO_REF:0000107 NCBI chr12:42,494,187...42,500,929
Ensembl chr12:42,496,300...42,500,914 		JBrowse link
G Alkbh3 alkB homolog 3, alpha-ketoglutarate-dependent dioxygenase involved_in IEA
ISO		 GO_REF:0000002
GO_REF:0000107
(PMID:20714506), (PMID:22055184)		 InterPro
Ensembl
RGD		 PMID:20714506 PMID:22055184 GO_REF:0000002 GO_REF:0000107 NCBI chr 3:79,939,515...79,972,820
Ensembl chr 3:79,939,600...79,972,000 		JBrowse link
G Ascc1 activating signal cointegrator 1 complex subunit 1 involved_in IEA GO_REF:0000002 InterPro GO_REF:0000002 NCBI chr20:27,941,053...28,031,272
Ensembl chr20:27,941,283...28,031,272 		JBrowse link
G Ascc3 activating signal cointegrator 1 complex subunit 3 involved_in ISO
ISS		 (PMID:22055184)
GO_REF:0000024		 RGD
UniProt		 PMID:22055184 GO_REF:0000024 NCBI chr20:53,510,137...53,795,446
Ensembl chr20:53,510,184...53,790,165 		JBrowse link
G Fto FTO, alpha-ketoglutarate dependent dioxygenase involved_in ISO
IEA		 (PMID:18775698)
GO_REF:0000002		 RGD
InterPro		 PMID:18775698 GO_REF:0000002 NCBI chr19:31,456,749...31,865,011
Ensembl chr19:15,349,696...15,692,083 		JBrowse link
G Mgmt O-6-methylguanine-DNA methyltransferase acts_upstream_of_or_within IDA
ISO		 (PMID:1554415) RGD PMID:1554415 PMID:15025514 RGD:2316914 NCBI chr 1:201,140,832...201,367,481
Ensembl chr 1:191,710,930...191,937,756 		JBrowse link
G Otud4 OTU deubiquitinase 4 involved_in ISO (PMID:25944111) RGD PMID:25944111 NCBI chr19:45,141,043...45,184,136
Ensembl chr19:28,236,713...28,279,815 		JBrowse link
G Usp7 ubiquitin specific peptidase 7 involved_in IEA
ISO
ISS		 GO_REF:0000107
(PMID:25944111)
GO_REF:0000024		 Ensembl
RGD
UniProt		 PMID:25944111 GO_REF:0000024 GO_REF:0000107 NCBI chr10:7,335,508...7,432,018
Ensembl chr10:6,828,795...6,925,355 		JBrowse link
G Usp9x ubiquitin specific peptidase 9, X-linked involved_in ISO
IEA		 (PMID:25944111)
GO_REF:0000107		 RGD
Ensembl		 PMID:25944111 GO_REF:0000107 NCBI chr  X:12,261,633...12,399,780
Ensembl chr  X:9,588,825...9,696,711 		JBrowse link
DNA double-strand break processing term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Atm ATM serine/threonine kinase involved_in ISO (PMID:10802669), (PMID:26240375) RGD PMID:10802669 PMID:26240375 NCBI chr 8:62,724,939...62,829,040
Ensembl chr 8:53,831,093...53,932,437 		JBrowse link
G Blm BLM RecQ like helicase involved_in ISO
IEA		 (PMID:21325134)
GO_REF:0000107		 RGD
Ensembl		 PMID:21325134 GO_REF:0000107 NCBI chr 1:143,819,072...143,905,300
Ensembl chr 1:134,409,857...134,484,312 		JBrowse link
G Dna2 DNA replication helicase/nuclease 2 involved_in ISS
IEA		 GO_REF:0000024
GO_REF:0000107		 UniProt
Ensembl		 GO_REF:0000024 GO_REF:0000107 NCBI chr20:25,660,339...25,689,285
Ensembl chr20:25,662,055...25,716,319 		JBrowse link
G Exd2 exonuclease 3'-5' domain containing 2 involved_in ISO (PMID:26807646) RGD PMID:26807646 NCBI chr 6:100,116,867...100,150,452
Ensembl chr 6:100,116,867...100,150,442 		JBrowse link
G Mre11 MRE11 homolog, double strand break repair nuclease involved_in ISO (PMID:23080121) RGD PMID:23080121 NCBI chr 8:19,900,211...19,961,906
Ensembl chr 8:11,632,354...11,678,279 		JBrowse link
G Nbn nibrin involved_in IEA
ISO
ISS		 GO_REF:0000107
(PMID:16622404)
GO_REF:0000024		 Ensembl
RGD
UniProt		 PMID:16622404 GO_REF:0000024 GO_REF:0000107 NCBI chr 5:34,256,678...34,291,163
Ensembl chr 5:29,459,457...29,494,150 		JBrowse link
G Rad50 RAD50 double strand break repair protein involved_in IEA
ISO
ISS		 GO_REF:0000107
(PMID:16622404), (PMID:21757780)
GO_REF:0000024		 Ensembl
RGD
UniProt		 PMID:16622404 PMID:21757780 GO_REF:0000024 GO_REF:0000107 NCBI chr10:38,310,147...38,362,100
Ensembl chr10:37,808,726...37,861,396 		JBrowse link
G Setmar SET domain and mariner transposase fusion gene involved_in ISO (PMID:21491884) RGD PMID:21491884 NCBI chr 4:142,602,066...142,614,208
Ensembl chr 4:141,046,069...141,058,197 		JBrowse link
G Slc25a16 solute carrier family 25 member 16 involved_in ISS
IEA		 GO_REF:0000024
GO_REF:0000107		 UniProt
Ensembl		 GO_REF:0000024 GO_REF:0000107 NCBI chr20:25,659,847...25,717,080
Ensembl chr20:25,662,055...25,716,319 		JBrowse link
G Smarcad1 SNF2 related chromatin remodeling ATPase with DExD box 1 involved_in ISO
IEA
IBA
ISS		 (PMID:22960744)
GO_REF:0000107
GO_REF:0000033
GO_REF:0000024		 RGD
Ensembl
GO_Central
UniProt		 PMID:22960744 GO_REF:0000024 GO_REF:0000033 GO_REF:0000107 NCBI chr 4:94,311,441...94,379,184
Ensembl chr 4:94,311,489...94,372,563 		JBrowse link
G Ube2n ubiquitin-conjugating enzyme E2N acts_upstream_of ISO (PMID:17349954) RGD PMID:17349954 NCBI chr 7:32,041,190...32,071,252
Ensembl chr 7:30,154,616...30,184,355 		JBrowse link
G Ube2v2 ubiquitin conjugating enzyme E2 V2 involved_in ISO (PMID:17349954) RGD PMID:17349954 NCBI chr11:98,808,681...98,842,583
Ensembl chr11:85,304,526...85,336,369 		JBrowse link
DNA double-strand break processing involved in repair via single-strand annealing term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Helq helicase, POLQ-like involved_in ISO
IEA		 (PMID:34937945)
GO_REF:0000107		 RGD
Ensembl		 PMID:34937945 GO_REF:0000107 NCBI chr14:9,122,978...9,167,310
Ensembl chr14:8,818,592...8,862,960 		JBrowse link
G Rad52 RAD52 homolog, DNA repair protein acts_upstream_of_or_within
involved_in		 ISO
IEA		 (PMID:19506022)
GO_REF:0000107
(PMID:22912580)		 RGD
Ensembl		 PMID:19506022 PMID:22912580 GO_REF:0000107 NCBI chr 4:154,778,320...154,802,002
Ensembl chr 4:153,106,062...153,128,207 		JBrowse link
G Rbbp8 RB binding protein 8, endonuclease involved_in ISO
IEA
IBA		 (PMID:18716619), (PMID:19202191)
GO_REF:0000107
GO_REF:0000033		 RGD
Ensembl
GO_Central		 PMID:18716619 PMID:19202191 GO_REF:0000033 GO_REF:0000107 NCBI chr18:3,198,188...3,263,643
Ensembl chr18:2,921,286...2,988,846 		JBrowse link
G Rnf138 ring finger protein 138 involved_in ISO
IEA
IBA
ISS		 (PMID:26502057)
GO_REF:0000107
GO_REF:0000033
GO_REF:0000024		 RGD
Ensembl
GO_Central
UniProt		 PMID:26502057 GO_REF:0000024 GO_REF:0000033 GO_REF:0000107 NCBI chr18:12,291,557...12,315,931
Ensembl chr18:12,291,590...12,315,930 		JBrowse link
G Rnf138l1 ring finger protein 138 like 1 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr  X:30,739,541...30,740,614
Ensembl chr  X:30,739,413...30,740,613 		JBrowse link
G Slx1b SLX1 homolog B, structure-specific endonuclease subunit involved_in ISO (PMID:19595721) RGD PMID:19595721 NCBI chr 1:181,286,190...181,291,739
Ensembl chr 1:181,283,921...181,291,775 		JBrowse link
G Slx4 SLX4 structure-specific endonuclease subunit involved_in ISO
IEA		 (PMID:19595721)
GO_REF:0000107		 RGD
Ensembl		 PMID:19595721 GO_REF:0000107 NCBI chr10:12,032,131...12,055,685
Ensembl chr10:11,528,424...11,549,295 		JBrowse link
DNA recombinase assembly term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Dmc1 DNA meiotic recombinase 1 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr 7:113,005,278...113,047,854
Ensembl chr 7:111,124,888...111,167,952 		JBrowse link
G Rad51 RAD51 recombinase involved_in ISO
IEA		 (PMID:26681308)
GO_REF:0000107		 RGD
Ensembl		 PMID:26681308 GO_REF:0000107 NCBI chr 3:126,554,210...126,578,888
Ensembl chr 3:106,100,381...106,125,035 		JBrowse link
G Rad52 RAD52 homolog, DNA repair protein involved_in IEA GO_REF:0000002 InterPro GO_REF:0000002 NCBI chr 4:154,778,320...154,802,002
Ensembl chr 4:153,106,062...153,128,207 		JBrowse link
DNA replication proofreading term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Pold1 DNA polymerase delta 1, catalytic subunit involved_in
acts_upstream_of_or_within		 IBA
IEA
ISO		 GO_REF:0000033
GO_REF:0000107
MGI:2447628 (PMID:12429860)		 GO_Central
Ensembl
RGD		 PMID:12429860 GO_REF:0000033 GO_REF:0000107 NCBI chr 1:104,161,984...104,178,074
Ensembl chr 1:95,025,499...95,036,465 		JBrowse link
G Pole DNA polymerase epsilon, catalytic subunit involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr12:52,005,155...52,053,761
Ensembl chr12:46,345,420...46,393,939 		JBrowse link
G Polg DNA polymerase gamma, catalytic subunit involved_in IEA
ISO
ISS		 GO_REF:0000107
(PMID:11897778), (PMID:37202477)
GO_REF:0000024		 Ensembl
RGD
UniProt		 PMID:11897778 PMID:37202477 GO_REF:0000024 GO_REF:0000107 NCBI chr 1:142,792,119...142,808,933
Ensembl chr 1:133,382,766...133,398,567 		JBrowse link
DNA synthesis involved in DNA repair term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Cdkn2d cyclin dependent kinase inhibitor 2D involved_in ISO
IEA		 (PMID:15750620)
GO_REF:0000107		 RGD
Ensembl		 PMID:15750620 GO_REF:0000107 NCBI chr 8:28,108,036...28,110,809
Ensembl chr 8:19,831,866...19,834,674 		JBrowse link
G Hrob homologous recombination factor with OB-fold involved_in ISS
IEA
ISO		 GO_REF:0000024
GO_REF:0000107
(PMID:31467087)		 UniProt
Ensembl
RGD		 PMID:31467087 GO_REF:0000024 GO_REF:0000107 NCBI chr10:87,206,017...87,222,483
Ensembl chr10:87,206,049...87,222,483 		JBrowse link
G Pola1 DNA polymerase alpha 1, catalytic subunit involved_in ISO (PMID:11470886) RGD PMID:11470886 NCBI chr  X:62,028,475...62,342,455
Ensembl chr  X:58,034,619...58,348,536 		JBrowse link
G Pold1 DNA polymerase delta 1, catalytic subunit involved_in ISS
IEA
ISO		 GO_REF:0000024
GO_REF:0000107
(PMID:1730053), (PMID:24191025), (PMID:3335506)		 UniProt
Ensembl
RGD		 PMID:1730053 PMID:3335506 PMID:24191025 GO_REF:0000024 GO_REF:0000107 NCBI chr 1:104,161,984...104,178,074
Ensembl chr 1:95,025,499...95,036,465 		JBrowse link
G Pold4 DNA polymerase delta 4, accessory subunit involved_in IBA
IEA		 GO_REF:0000033
GO_REF:0000002		 GO_Central
InterPro		 GO_REF:0000002 GO_REF:0000033 NCBI chr 1:210,956,110...210,957,863
Ensembl chr 1:201,526,665...201,528,401 		JBrowse link
G Pole DNA polymerase epsilon, catalytic subunit involved_in ISO
IEA		 (PMID:1730053)
GO_REF:0000107		 RGD
Ensembl		 PMID:1730053 GO_REF:0000107 NCBI chr12:52,005,155...52,053,761
Ensembl chr12:46,345,420...46,393,939 		JBrowse link
G Polh DNA polymerase eta involved_in ISO
IEA		 (PMID:17563354)
GO_REF:0000107		 RGD
Ensembl		 PMID:17563354 GO_REF:0000107 NCBI chr 9:22,275,929...22,310,576
Ensembl chr 9:14,777,888...14,812,723 		JBrowse link
G Sirt1 sirtuin 1 involved_in IEA
ISO		 GO_REF:0000107
(PMID:17612497)		 Ensembl
RGD		 PMID:17612497 GO_REF:0000107 NCBI chr20:25,305,953...25,328,000
Ensembl chr20:25,306,917...25,329,260 		JBrowse link
G Wrn WRN RecQ like helicase involved_in ISO (PMID:17563354) RGD PMID:17563354 NCBI chr16:65,466,552...65,602,951
Ensembl chr16:58,763,504...58,895,450 		JBrowse link
G Wrnip1 WRN helicase interacting protein 1 involved_in ISS
IBA
IEA
ISO		 GO_REF:0000024
GO_REF:0000033
GO_REF:0000107
(PMID:15670210)		 UniProt
GO_Central
Ensembl
RGD		 PMID:15670210 GO_REF:0000024 GO_REF:0000033 GO_REF:0000107 NCBI chr17:31,830,159...31,850,408
Ensembl chr17:31,621,411...31,641,659 		JBrowse link
DNA synthesis involved in UV-damage excision repair term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Pola1 DNA polymerase alpha 1, catalytic subunit NOT|involved_in ISO
ISS		 (PMID:1730053)
GO_REF:0000024		 RGD
UniProt		 PMID:1730053 GO_REF:0000024 NCBI chr  X:62,028,475...62,342,455
Ensembl chr  X:58,034,619...58,348,536 		JBrowse link
G Pold3 DNA polymerase delta 3, accessory subunit involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr 1:163,830,217...163,870,015
Ensembl chr 1:154,418,084...154,456,665 		JBrowse link
G Trex1 three prime repair exonuclease 1 acts_upstream_of_or_within ISO
IEA		 MGI:3052754 (PMID:23993650)
GO_REF:0000107		 RGD
Ensembl		 PMID:23993650 GO_REF:0000107 NCBI chr 8:118,585,082...118,586,382
Ensembl chr 8:109,706,613...109,708,796 		JBrowse link
double-strand break repair term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Abraxas1 abraxas 1, BRCA1 A complex subunit involved_in ISS
ISO
IEA		 GO_REF:0000024
(PMID:17525340), (PMID:17643121), (PMID:19261748)
GO_REF:0000107		 UniProt
RGD
Ensembl		 PMID:17525340 PMID:17643121 PMID:19261748 GO_REF:0000024 GO_REF:0000107 NCBI chr14:9,100,650...9,115,012
Ensembl chr14:8,796,266...8,810,622 		JBrowse link
G Actr5 actin related protein 5 involved_in ISO
IEA		 (PMID:19014934)
GO_REF:0000107		 RGD
Ensembl		 PMID:19014934 GO_REF:0000107 NCBI chr 3:167,702,299...167,715,736
Ensembl chr 3:147,282,624...147,296,110 		JBrowse link
G Actr8 actin related protein 8 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr16:5,170,649...5,192,883
Ensembl chr16:5,164,129...5,178,577 		JBrowse link
G Apbb1 amyloid beta precursor protein binding family B member 1 involved_in ISO (PMID:17121854) RGD PMID:17121854 NCBI chr 1:169,308,719...169,332,372
Ensembl chr 1:159,896,880...159,920,627 		JBrowse link
G Aplf aprataxin and PNKP like factor involved_in
acts_upstream_of_or_within		 ISO
IEA
IBA		 (PMID:17396150)
GO_REF:0000107
GO_REF:0000002
MGI:4128102 (PMID:21211721)
GO_REF:0000033		 RGD
Ensembl
InterPro
GO_Central		 PMID:17396150 PMID:21211721 GO_REF:0000002 GO_REF:0000033 GO_REF:0000107 NCBI chr 4:121,627,800...121,679,980
Ensembl chr 4:120,070,471...120,122,633 		JBrowse link
G Atm ATM serine/threonine kinase involved_in ISO
IBA		 (PMID:26240375)
GO_REF:0000033		 RGD
GO_Central		 PMID:26240375 GO_REF:0000033 NCBI chr 8:62,724,939...62,829,040
Ensembl chr 8:53,831,093...53,932,437 		JBrowse link
G Atr ATR serine/threonine kinase involved_in ISO
IEA		 (PMID:11390642)
GO_REF:0000107		 RGD
Ensembl		 PMID:11390642 GO_REF:0000107 NCBI chr 8:105,306,299...105,403,742
Ensembl chr 8:96,426,724...96,524,136 		JBrowse link
G Babam1 BRISC and BRCA1 A complex member 1 involved_in ISO
IBA
ISS		 (PMID:19261746), (PMID:19261748), (PMID:19261749)
GO_REF:0000033
GO_REF:0000024		 RGD
GO_Central
UniProt		 PMID:19261746 PMID:19261748 PMID:19261749 GO_REF:0000024 GO_REF:0000033 NCBI chr16:18,102,885...18,108,916
Ensembl chr16:18,068,884...18,074,923 		JBrowse link
G Babam2 BRISC and BRCA1 A complex member 2 involved_in ISS
IEA
IBA
ISO		 GO_REF:0000024
GO_REF:0000107
GO_REF:0000033
GO_REF:0000104
(PMID:19261748)		 UniProt
Ensembl
GO_Central
RGD		 PMID:19261748 GO_REF:0000024 GO_REF:0000033 GO_REF:0000104 GO_REF:0000107 NCBI chr 6:30,089,065...30,467,508
Ensembl chr 6:24,369,022...24,833,951 		JBrowse link
G Bend2 BEN domain containing 2 acts_upstream_of_or_within ISO (PMID:35613276) RGD PMID:35613276 NCBI chr  X:36,997,518...37,093,363 JBrowse link
G Brca1 BRCA1, DNA repair associated involved_in ISO (PMID:17525340), (PMID:17643121), (PMID:19261748), (PMID:22186889)
(PMID:22186889)		 RGD PMID:17525340 PMID:17643121 PMID:19261748 PMID:22186889 NCBI chr10:86,917,693...86,978,012
Ensembl chr10:86,418,000...86,477,304 		JBrowse link
G Brca2 BRCA2, DNA repair associated involved_in
acts_upstream_of_or_within		 ISO
IEA		 (PMID:16845393)
GO_REF:0000107
MGI:2156556|MGI:2176173|MGI:2177226 (PMID:17476307), (PMID:9398843)		 RGD
Ensembl		 PMID:9398843 PMID:16845393 PMID:17476307 GO_REF:0000107 NCBI chr12:4,895,092...4,939,340
Ensembl chr12:59,819...100,567 		JBrowse link
G Brcc3 BRCA1/BRCA2-containing complex subunit 3 involved_in ISS
IBA
ISO		 GO_REF:0000024
GO_REF:0000033
(PMID:17525341), (PMID:19261746), (PMID:19261748)		 UniProt
GO_Central
RGD		 PMID:17525341 PMID:19261746 PMID:19261748 GO_REF:0000024 GO_REF:0000033 NCBI chr 9:2,073,927...2,076,469
Ensembl chr 9:1,986,575...1,991,080 		JBrowse link
G Brcc3dc BRCA1/BRCA2-containing complex, subunit 3, domain containing involved_in IBA
IEA		 GO_REF:0000033
GO_REF:0000104		 GO_Central
UniProt		 GO_REF:0000033 GO_REF:0000104 NCBI chr 7:45,901,321...45,903,078
Ensembl chr 7:44,005,646...44,016,670 		JBrowse link
G Cdca5 cell division cycle associated 5 involved_in ISO
IBA		 (PMID:17349791)
GO_REF:0000033		 RGD
GO_Central		 PMID:17349791 GO_REF:0000033 NCBI chr 1:212,807,863...212,821,313
Ensembl chr 1:203,378,577...203,392,023 		JBrowse link
G Chek2 checkpoint kinase 2 involved_in ISO
IEA		 (PMID:18317453)
GO_REF:0000107		 RGD
Ensembl		 PMID:18317453 GO_REF:0000107 NCBI chr12:51,448,838...51,481,159
Ensembl chr12:45,788,827...45,821,286 		JBrowse link
G Csnk2a1 casein kinase 2 alpha 1 involved_in ISS
IBA
ISO		 GO_REF:0000024
GO_REF:0000033
(PMID:22325354)		 UniProt
GO_Central
RGD		 PMID:22325354 GO_REF:0000024 GO_REF:0000033 NCBI chr 3:161,170,295...161,217,073
Ensembl chr 3:140,709,991...140,756,696 		JBrowse link
G Csnk2a2 casein kinase 2 alpha 2 involved_in ISO
IEA		 (PMID:22325354)
GO_REF:0000107		 RGD
Ensembl		 PMID:22325354 GO_REF:0000107 NCBI chr19:9,562,340...9,602,136
Ensembl chr19:9,556,260...9,596,080 		JBrowse link
G Dclre1c DNA cross-link repair 1C acts_upstream_of_or_within ISO (PMID:12615897) RGD PMID:12615897 NCBI chr17:79,684,988...79,718,399
Ensembl chr17:74,776,935...74,809,186 		JBrowse link
G Ddx1 DEAD-box helicase 1 involved_in ISS
IEA
ISO		 GO_REF:0000024
GO_REF:0000107
(PMID:18710941)		 UniProt
Ensembl
RGD		 PMID:18710941 GO_REF:0000024 GO_REF:0000107 NCBI chr 6:41,725,365...41,756,236
Ensembl chr 6:35,996,469...36,027,365 		JBrowse link
G Dtx3l deltex E3 ubiquitin ligase 3L involved_in ISO
IEA		 (PMID:23230272)
GO_REF:0000107		 RGD
Ensembl		 PMID:23230272 GO_REF:0000107 NCBI chr11:78,320,225...78,329,837
Ensembl chr11:64,814,926...64,824,538 		JBrowse link
G Eme1 essential meiotic structure-specific endonuclease 1 involved_in ISO
IEA
IBA		 (PMID:18413719)
GO_REF:0000107
GO_REF:0000033		 RGD
Ensembl
GO_Central		 PMID:18413719 GO_REF:0000033 GO_REF:0000107 NCBI chr10:80,083,585...80,092,450
Ensembl chr10:79,586,729...79,595,435 		JBrowse link
G Eme2 essential meiotic structure-specific endonuclease subunit 2 involved_in ISO
IEA
IBA		 (PMID:17289582)
GO_REF:0000107
GO_REF:0000033		 RGD
Ensembl
GO_Central		 PMID:17289582 GO_REF:0000033 GO_REF:0000107 NCBI chr10:14,413,661...14,420,489
Ensembl chr10:13,913,221...13,915,968 		JBrowse link
G Ercc1 ERCC excision repair 1, endonuclease non-catalytic subunit NOT|acts_upstream_of_or_within ISO MGI:2183944 (PMID:11707424)
MGI:2158940|MGI:2183944|MGI:3617449 (PMID:15199134), (PMID:17912366)		 RGD PMID:11707424 PMID:15199134 PMID:17912366 NCBI chr 1:88,099,308...88,135,966
Ensembl chr 1:78,996,390...79,007,963 		JBrowse link
G Esco2 establishment of sister chromatid cohesion N-acetyltransferase 2 acts_upstream_of_or_within ISO MGI:5308063 (PMID:22614755) RGD PMID:22614755 NCBI chr15:44,210,124...44,230,785
Ensembl chr15:40,034,568...40,055,306
Ensembl chr15:40,034,568...40,055,306 		JBrowse link
G Exd2 exonuclease 3'-5' domain containing 2 involved_in ISO (PMID:26807646) RGD PMID:26807646 NCBI chr 6:100,116,867...100,150,452
Ensembl chr 6:100,116,867...100,150,442 		JBrowse link
G Eya1 EYA transcriptional coactivator and phosphatase 1 involved_in ISO (PMID:19234442) RGD PMID:19234442 NCBI chr 5:9,646,599...9,884,609
Ensembl chr 5:4,955,543...5,101,483 		JBrowse link
G Eya3 EYA transcriptional coactivator and phosphatase 3 involved_in ISO
IEA		 (PMID:19234442)
GO_REF:0000107		 RGD
Ensembl		 PMID:19234442 GO_REF:0000107 NCBI chr 5:150,090,535...150,218,855
Ensembl chr 5:144,806,577...144,934,518 		JBrowse link
G Ggn gametogenetin involved_in
acts_upstream_of_or_within		 IEA
ISO		 GO_REF:0000002
MGI:5503309 (PMID:23451117)		 InterPro
RGD		 PMID:23451117 GO_REF:0000002 NCBI chr 1:93,598,076...93,601,598
Ensembl chr 1:84,470,508...84,474,114 		JBrowse link
G Haus3 HAUS augmin-like complex, subunit 3 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr14:76,580,549...76,599,542
Ensembl chr14:76,580,546...76,752,463 		JBrowse link
G Hmgb1 high mobility group box 1 involved_in IDA PMID:10866811 UniProt PMID:10866811 RGD:10449519 NCBI chr12:11,009,236...11,015,941
Ensembl chr12:5,901,586...5,978,565
Ensembl chr16:5,901,586...5,978,565 		JBrowse link
G Hpf1 histone PARylation factor 1 involved_in ISO
IEA
IBA		 (PMID:32028527)
GO_REF:0000107
GO_REF:0000033		 RGD
Ensembl
GO_Central		 PMID:32028527 GO_REF:0000033 GO_REF:0000107 NCBI chr16:29,203,749...29,219,651
Ensembl chr16:29,183,256...29,219,716 		JBrowse link
G Ino80 INO80 complex ATPase subunit involved_in ISO
IEA		 (PMID:20687897)
GO_REF:0000107		 RGD
Ensembl		 PMID:20687897 GO_REF:0000107 NCBI chr 3:126,822,280...126,919,532
Ensembl chr 3:106,368,455...106,467,911 		JBrowse link
G Kat5 lysine acetyltransferase 5 involved_in ISS
IEA
ISO		 GO_REF:0000024
GO_REF:0000107
(PMID:26438602)		 UniProt
Ensembl
RGD		 PMID:26438602 GO_REF:0000024 GO_REF:0000107 NCBI chr 1:212,325,089...212,332,640
Ensembl chr 1:202,895,751...202,903,458 		JBrowse link
G Lig3 DNA ligase 3 involved_in ISO
IEA
IBA		 (PMID:19589734)
GO_REF:0000107
GO_REF:0000033		 RGD
Ensembl
GO_Central		 PMID:19589734 GO_REF:0000033 GO_REF:0000107 NCBI chr10:68,215,371...68,238,705
Ensembl chr10:67,717,812...67,798,414 		JBrowse link
G Lig4 DNA ligase 4 involved_in
acts_upstream_of_or_within		 ISO (PMID:19589734), (PMID:9242410)
MGI:104517|MGI:1857732|MGI:3714783|MGI:894697 (PMID:12531011), (PMID:15175260), (PMID:17554302)		 RGD PMID:9242410 PMID:12531011 PMID:15175260 PMID:17554302 PMID:19589734 NCBI chr16:86,220,345...86,228,930
Ensembl chr16:79,518,312...79,527,040 		JBrowse link
G LOC102557137 E3 ubiquitin-protein ligase RNF168-like involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr  X:40,065,873...40,067,029
Ensembl chr  X:40,065,873...40,067,207 		JBrowse link
G Mad2l2 mitotic arrest deficient 2 like 2 involved_in ISO
ISS		 (PMID:15988022)
GO_REF:0000024		 RGD
UniProt		 PMID:15988022 GO_REF:0000024 NCBI chr 5:163,846,678...163,859,851
Ensembl chr 5:158,563,567...158,576,693 		JBrowse link
G Marf1 meiosis regulator and mRNA stability factor 1 acts_upstream_of_or_within ISO MGI:3512917 (PMID:23090997) RGD PMID:23090997 NCBI chr10:1,395,271...1,439,974
Ensembl chr10:888,076...932,753 		JBrowse link
G Meioc meiosis specific with coiled-coil domain involved_in ISO
IEA		 (PMID:26742488)
GO_REF:0000107		 RGD
Ensembl		 PMID:26742488 GO_REF:0000107 NCBI chr10:88,128,939...88,147,833
Ensembl chr10:87,628,875...87,646,752 		JBrowse link
G Mpnd MPN domain containing involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr 9:926,714...933,620
Ensembl chr 9:840,143...846,439 		JBrowse link
G Mre11 MRE11 homolog, double strand break repair nuclease involved_in
acts_upstream_of_or_within		 ISO
IEA		 (PMID:14657032), (PMID:26240375)
GO_REF:0000002
GO_REF:0000104
MGI:3027036 (PMID:17291760)		 RGD
InterPro
UniProt		 PMID:14657032 PMID:17291760 PMID:26240375 GO_REF:0000002 GO_REF:0000104 NCBI chr 8:19,900,211...19,961,906
Ensembl chr 8:11,632,354...11,678,279 		JBrowse link
G Msh2 mutS homolog 2 acts_upstream_of_or_within ISO
IEA		 MGI:1858055 (PMID:17912366)
GO_REF:0000107		 RGD
Ensembl		 PMID:17912366 GO_REF:0000107 NCBI chr 6:12,567,368...12,626,534
Ensembl chr 6:6,813,795...6,872,938 		JBrowse link
G Mta1 metastasis associated 1 involved_in ISO
IBA
IEA
ISS		 (PMID:19805145)
GO_REF:0000033
GO_REF:0000107
GO_REF:0000024		 RGD
GO_Central
Ensembl
UniProt		 PMID:19805145 GO_REF:0000024 GO_REF:0000033 GO_REF:0000107 NCBI chr 6:137,999,845...138,038,696
Ensembl chr 6:132,178,853...132,217,641 		JBrowse link
G Mus81 MUS81 structure-specific endonuclease subunit involved_in ISO
IEA		 (PMID:17289582), (PMID:18413719)
GO_REF:0000107
GO_REF:0000002		 RGD
Ensembl
InterPro		 PMID:17289582 PMID:18413719 GO_REF:0000002 GO_REF:0000107 NCBI chr 1:212,219,793...212,225,214
Ensembl chr 1:202,790,466...202,795,843 		JBrowse link
G Nbn nibrin involved_in ISS
IEA
ISO		 GO_REF:0000024
GO_REF:0000107
GO_REF:0000002
(PMID:9590181)		 UniProt
Ensembl
InterPro
RGD		 PMID:9590181 GO_REF:0000002 GO_REF:0000024 GO_REF:0000107 NCBI chr 5:34,256,678...34,291,163
Ensembl chr 5:29,459,457...29,494,150 		JBrowse link
G Nhej1 nonhomologous end-joining factor 1 involved_in IEA GO_REF:0000002 InterPro GO_REF:0000002 NCBI chr 9:83,974,995...84,071,161
Ensembl chr 9:76,526,324...76,622,444 		JBrowse link
G Parp1 poly (ADP-ribose) polymerase 1 involved_in
acts_upstream_of_or_within		 ISS
IEA
ISO
IBA		 GO_REF:0000024
GO_REF:0000107
MGI:1891258 (PMID:21270334)
GO_REF:0000033
(PMID:23230272), (PMID:24906880), (PMID:27568560), (PMID:28190768), (PMID:32028527)		 UniProt
Ensembl
RGD
GO_Central		 PMID:21270334 PMID:23230272 PMID:24906880 PMID:27568560 PMID:28190768 More... GO_REF:0000024 GO_REF:0000033 GO_REF:0000107 NCBI chr13:94,839,484...94,871,295
Ensembl chr13:92,307,586...92,339,404 		JBrowse link
G Parp2 poly (ADP-ribose) polymerase 2 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr15:24,034,069...24,044,340
Ensembl chr15:24,034,106...24,044,338 		JBrowse link
G Parp3 poly (ADP-ribose) polymerase family, member 3 acts_upstream_of_or_within
involved_in		 ISO
IEA
IBA		 (PMID:21211721), (PMID:21270334)
GO_REF:0000107
MGI:1340806 (PMID:21270334)
GO_REF:0000033		 RGD
Ensembl
GO_Central		 PMID:21211721 PMID:21270334 GO_REF:0000033 GO_REF:0000107 NCBI chr 8:115,989,721...115,995,822
Ensembl chr 8:107,111,012...107,116,782 		JBrowse link
G Parp9 poly (ADP-ribose) polymerase family, member 9 involved_in ISO
IEA		 (PMID:23230272)
GO_REF:0000107		 RGD
Ensembl		 PMID:23230272 GO_REF:0000107 NCBI chr11:78,286,282...78,320,409
Ensembl chr11:64,780,981...64,815,455 		JBrowse link
G Plk1 polo-like kinase 1 involved_in ISO
IEA		 (PMID:22325354)
GO_REF:0000107		 RGD
Ensembl		 PMID:22325354 GO_REF:0000107 NCBI chr 1:186,147,658...186,157,637
Ensembl chr 1:176,716,420...176,726,400 		JBrowse link
G Poln DNA polymerase nu involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr14:76,579,983...76,752,460
Ensembl chr14:76,580,546...76,752,463 		JBrowse link
G Polq DNA polymerase theta involved_in ISO
IEA		 (PMID:22135286)
GO_REF:0000107		 RGD
Ensembl		 PMID:22135286 GO_REF:0000107 NCBI chr11:77,179,190...77,281,270
Ensembl chr11:63,673,816...63,775,878 		JBrowse link
G Prkdc protein kinase, DNA-activated, catalytic subunit involved_in
acts_upstream_of_or_within		 ISO
IEA
IBA		 (PMID:18710952)
GO_REF:0000117
GO_REF:0000107
MGI:1857113|MGI:2667593 (PMID:11751629), (PMID:12604618)
GO_REF:0000033		 RGD
UniProt
Ensembl
GO_Central		 PMID:11751629 PMID:12604618 PMID:18710952 GO_REF:0000033 GO_REF:0000107 GO_REF:0000117 NCBI chr11:98,544,952...98,762,499
Ensembl chr11:85,040,792...85,257,952 		JBrowse link
G Rad21l1 RAD21 cohesin complex component like 1 acts_upstream_of_or_within ISO
IEA		 MGI:5292341 (PMID:21743440)
GO_REF:0000107		 RGD
Ensembl		 PMID:21743440 GO_REF:0000107 NCBI chr 3:160,620,500...160,648,716
Ensembl chr 3:140,160,118...140,188,298 		JBrowse link
G Rad50 RAD50 double strand break repair protein involved_in TAS
IEA
IBA
ISS
ISO		 GO_REF:0000002
GO_REF:0000107
GO_REF:0000033
GO_REF:0000024
(PMID:9590181)		 InterPro
Ensembl
GO_Central
UniProt
RGD		 PMID:9590181 PMID:10908350 GO_REF:0000002 GO_REF:0000024 GO_REF:0000033 GO_REF:0000107, RGD:68816 NCBI chr10:38,310,147...38,362,100
Ensembl chr10:37,808,726...37,861,396 		JBrowse link
G Rad52 RAD52 homolog, DNA repair protein involved_in IEA GO_REF:0000117 UniProt GO_REF:0000117 NCBI chr 4:154,778,320...154,802,002
Ensembl chr 4:153,106,062...153,128,207 		JBrowse link
G Rad54l RAD54 like acts_upstream_of_or_within ISO
IEA		 MGI:1335098 (PMID:15175260)
GO_REF:0000107		 RGD
Ensembl		 PMID:15175260 GO_REF:0000107 NCBI chr 5:134,812,158...134,841,821
Ensembl chr 5:129,575,378...129,605,070 		JBrowse link
G Rdm1 RAD52 motif containing 1 involved_in IEA GO_REF:0000117 UniProt GO_REF:0000117 NCBI chr10:87,062,322...87,073,273
Ensembl chr10:86,539,553...86,573,034 		JBrowse link
G Rec8 REC8 meiotic recombination protein involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr15:33,079,818...33,087,283
Ensembl chr15:29,109,863...29,117,326 		JBrowse link
G Rnf168 ring finger protein 168 involved_in ISO
IEA
IBA
ISS		 (PMID:19203578), (PMID:19203579), (PMID:22980979)
GO_REF:0000104
GO_REF:0000002
GO_REF:0000033
GO_REF:0000024		 RGD
UniProt
InterPro
GO_Central		 PMID:19203578 PMID:19203579 PMID:22980979 GO_REF:0000002 GO_REF:0000024 GO_REF:0000033 GO_REF:0000104 NCBI chr11:81,991,352...82,013,306
Ensembl chr11:68,486,321...68,508,277 		JBrowse link
G Rnf169 ring finger protein 169 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr 1:163,662,582...163,724,154
Ensembl chr 1:154,254,473...154,311,653 		JBrowse link
G Rnf8 ring finger protein 8 involved_in ISS
IEA
IBA
ISO		 GO_REF:0000024
GO_REF:0000104
GO_REF:0000002
GO_REF:0000033
(PMID:18001824), (PMID:18001825), (PMID:22980979)		 UniProt
InterPro
GO_Central
RGD		 PMID:18001824 PMID:18001825 PMID:22980979 GO_REF:0000002 GO_REF:0000024 GO_REF:0000033 GO_REF:0000104 NCBI chr20:7,683,890...7,708,437
Ensembl chr20:7,682,322...7,708,491 		JBrowse link
G Setx senataxin involved_in ISO
IEA		 (PMID:17562789)
GO_REF:0000107		 RGD
Ensembl		 PMID:17562789 GO_REF:0000107 NCBI chr 3:32,825,771...32,878,740
Ensembl chr 3:12,427,635...12,480,803 		JBrowse link
G Sirt6 sirtuin 6 involved_in ISO (PMID:21680843), (PMID:27568560) RGD PMID:21680843 PMID:27568560 NCBI chr 7:8,733,056...8,738,543
Ensembl chr 7:8,082,364...8,098,914 		JBrowse link
G Smc6 structural maintenance of chromosomes 6 involved_in IEA GO_REF:0000002 InterPro GO_REF:0000002 NCBI chr 6:39,697,810...39,752,275
Ensembl chr 6:33,978,716...34,031,746 		JBrowse link
G Smchd1 structural maintenance of chromosomes flexible hinge domain containing 1 involved_in IEA GO_REF:0000002 InterPro GO_REF:0000002 NCBI chr 9:118,690,050...118,837,281
Ensembl chr 9:111,247,702...111,349,665 		JBrowse link
G Tdp1 tyrosyl-DNA phosphodiesterase 1 involved_in ISO (PMID:12023295) RGD PMID:12023295 NCBI chr 6:124,892,821...124,960,646
Ensembl chr 6:119,163,166...119,231,021 		JBrowse link
G Tdp2 tyrosyl-DNA phosphodiesterase 2 involved_in ISO
IBA
IEA
ISS		 (PMID:19794497), (PMID:21030584)
GO_REF:0000033
GO_REF:0000107
GO_REF:0000024		 RGD
GO_Central
Ensembl
UniProt		 PMID:19794497 PMID:21030584 GO_REF:0000024 GO_REF:0000033 GO_REF:0000107 NCBI chr17:40,228,943...40,240,337
Ensembl chr17:40,228,947...40,240,313 		JBrowse link
G Tnks1bp1 tankyrase 1 binding protein 1 involved_in ISO
IEA
IBA		 (PMID:25749521)
GO_REF:0000107
GO_REF:0000033		 RGD
Ensembl
GO_Central		 PMID:25749521 GO_REF:0000033 GO_REF:0000107 NCBI chr 3:70,135,335...70,160,071
Ensembl chr 3:70,137,837...70,160,038 		JBrowse link
G Tp53 tumor protein p53 acts_upstream_of_or_within ISO
IEA		 MGI:1857989 (PMID:17912366)
GO_REF:0000107		 RGD
Ensembl		 PMID:17912366 GO_REF:0000107 NCBI chr10:54,798,871...54,810,300
Ensembl chr10:54,300,048...54,311,524 		JBrowse link
G Trip13 thyroid hormone receptor interactor 13 involved_in
acts_upstream_of_or_within		 ISS
IEA
ISO		 GO_REF:0000024
GO_REF:0000107
(PMID:20711356)
MGI:3719273 (PMID:17696610)		 UniProt
Ensembl
RGD		 PMID:17696610 PMID:20711356 GO_REF:0000024 GO_REF:0000107 NCBI chr 1:31,185,700...31,230,638
Ensembl chr 1:29,357,130...29,402,074 		JBrowse link
G Uimc1 ubiquitin interaction motif containing 1 involved_in ISS
IBA
IEA
ISO		 GO_REF:0000024
GO_REF:0000033
GO_REF:0000002
(PMID:17525340), (PMID:17525341), (PMID:17525342), (PMID:17643121), (PMID:19261748)
GO_REF:0000107		 UniProt
GO_Central
InterPro
RGD
Ensembl		 PMID:17525340 PMID:17525341 PMID:17525342 PMID:17643121 PMID:19261748 GO_REF:0000002 GO_REF:0000024 GO_REF:0000033 GO_REF:0000107 NCBI chr17:9,528,923...9,597,967
Ensembl chr17:9,527,794...9,592,799 		JBrowse link
G Vcp valosin-containing protein involved_in ISS
IEA
ISO		 GO_REF:0000024
GO_REF:0000107
(PMID:10855792), (PMID:22120668)		 UniProt
Ensembl
RGD		 PMID:10855792 PMID:22120668 GO_REF:0000024 GO_REF:0000107 NCBI chr 5:62,005,984...62,025,387
Ensembl chr 5:57,210,168...57,229,571 		JBrowse link
G Wrn WRN RecQ like helicase involved_in ISO (PMID:21639834) RGD PMID:21639834 NCBI chr16:65,466,552...65,602,951
Ensembl chr16:58,763,504...58,895,450 		JBrowse link
G Xrcc1 X-ray repair cross complementing 1 involved_in ISO
IEA		 (PMID:19589734)
GO_REF:0000107		 RGD
Ensembl		 PMID:19589734 GO_REF:0000107 NCBI chr 1:89,268,721...89,296,619
Ensembl chr 1:80,141,207...80,168,701 		JBrowse link
G Xrcc4 X-ray repair cross complementing 4 acts_upstream_of_or_within
involved_in		 ISO
IEA		 MGI:1926771 (PMID:11751629), (PMID:9875844)
GO_REF:0000002
GO_REF:0000107
(PMID:19589734), (PMID:9242410)		 RGD
InterPro
Ensembl		 PMID:9242410 PMID:9875844 PMID:11751629 PMID:19589734 GO_REF:0000002 GO_REF:0000107 NCBI chr 2:22,686,506...22,932,929
Ensembl chr 2:20,951,200...21,197,808 		JBrowse link
G Xrcc5 X-ray repair cross complementing 5 involved_in
acts_upstream_of_or_within		 NAS
IEA
ISO		 GO_REF:0000117
MGI:1335098|MGI:2179987 (PMID:12531011)
(PMID:19581589)		 UniProt
RGD		 PMID:12531011 PMID:19581589 PMID:11966321 GO_REF:0000117, RGD:727219 NCBI chr 9:81,404,507...81,493,293
Ensembl chr 9:73,955,216...74,044,018 		JBrowse link
G Xrcc6 X-ray repair cross complementing 6 acts_upstream_of_or_within TAS
ISO		 MGI:2179954 (PMID:11751629) RGD PMID:11751629 PMID:11966321 RGD:727219 NCBI chr 7:115,423,026...115,443,884
Ensembl chr 7:113,543,057...113,563,762 		JBrowse link
G Zgrf1 zinc finger, GRF-type containing 1 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr 2:216,012,911...216,075,608
Ensembl chr 2:216,013,005...216,074,750 		JBrowse link
double-strand break repair involved in meiotic recombination term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Brip1 BRCA1 interacting DNA helicase 1 involved_in
acts_upstream_of_or_within		 IBA
ISO		 GO_REF:0000033
MGI:4129733 (PMID:26490168)		 GO_Central
RGD		 PMID:26490168 GO_REF:0000033 NCBI chr10:71,402,035...71,528,083
Ensembl chr10:70,907,371...71,030,324 		JBrowse link
G Brme1 break repair meiotic recombinase recruitment factor 1 involved_in ISO
IEA		 (PMID:32345962), (PMID:32460033), (PMID:32463460)
GO_REF:0000002		 RGD
InterPro		 PMID:32345962 PMID:32460033 PMID:32463460 GO_REF:0000002 NCBI chr19:40,894,821...40,916,506
Ensembl chr19:23,990,045...24,011,850 		JBrowse link
G Dmc1 DNA meiotic recombinase 1 involved_in ISO
IEA		 (PMID:17639081)
GO_REF:0000107		 RGD
Ensembl		 PMID:17639081 GO_REF:0000107 NCBI chr 7:113,005,278...113,047,854
Ensembl chr 7:111,124,888...111,167,952 		JBrowse link
G Fancd2 FA complementation group D2 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr 4:148,234,633...148,299,035
Ensembl chr 4:146,679,179...146,743,412 		JBrowse link
G Hsf2bp heat shock transcription factor 2 binding protein involved_in ISO
IEA		 (PMID:30760716), (PMID:31242413), (PMID:32345962), (PMID:32463460)
GO_REF:0000107		 RGD
Ensembl		 PMID:30760716 PMID:31242413 PMID:32345962 PMID:32463460 GO_REF:0000107 NCBI chr20:10,035,263...10,121,262
Ensembl chr20:10,035,562...10,121,242 		JBrowse link
G Majin membrane anchored junction protein acts_upstream_of_or_within ISO MGI:1921651 (PMID:30718482) RGD PMID:30718482 NCBI chr 1:212,917,038...212,953,377
Ensembl chr 1:203,488,069...203,524,092 		JBrowse link
G Mcmdc2 minichromosome maintenance domain containing 2 acts_upstream_of_or_within ISO MGI:1349669|MGI:2178050|MGI:5511194 (PMID:27760146) RGD PMID:27760146 NCBI chr 5:14,071,609...14,120,435
Ensembl chr 5:9,298,101...9,338,300 		JBrowse link
G Morc2b microrchidia 2B involved_in IEA GO_REF:0000107 Ensembl GO_REF:0000107 NCBI chr 7:12,964,822...12,968,902
Ensembl chr 7:12,314,349...12,318,421 		JBrowse link
G Prdm9 PR/SET domain 9 involved_in ISS
ISO		 GO_REF:0000024
(PMID:25894966), (PMID:29478809)		 UniProt
RGD		 PMID:25894966 PMID:29478809 GO_REF:0000024 NCBI chr 1:65,178,666...65,198,851
Ensembl chr 1:56,505,579...56,525,652 		JBrowse link
G Rad51 RAD51 recombinase involved_in ISO
IEA		 (PMID:15834424)
GO_REF:0000107		 RGD
Ensembl		 PMID:15834424 GO_REF:0000107 NCBI chr 3:126,554,210...126,578,888
Ensembl chr 3:106,100,381...106,125,035 		JBrowse link
G Spo11 SPO11 initiator of meiotic double strand breaks acts_upstream_of_or_within ISO
IEA		 MGI:3045334 (PMID:27760146)
GO_REF:0000107		 RGD
Ensembl		 PMID:27760146 GO_REF:0000107 NCBI chr 3:182,173,615...182,189,273
Ensembl chr 3:161,757,519...161,770,925 		JBrowse link
G Terb1 telomere repeat binding bouquet formation protein 1 acts_upstream_of_or_within ISO
IEA		 MGI:1921651 (PMID:30718482)
GO_REF:0000107		 RGD
Ensembl		 PMID:30718482 GO_REF:0000107 NCBI chr19:480,160...534,534
Ensembl chr19:473,218...528,084 		JBrowse link
G Terb2 telomere repeat binding bouquet formation protein 2 acts_upstream_of_or_within ISO
IEA		 MGI:1923913|MGI:2443187|MGI:6362934|MGI:6362936 (PMID:30718482)
GO_REF:0000107		 RGD
Ensembl		 PMID:30718482 GO_REF:0000107 NCBI chr 3:129,591,933...129,610,293
Ensembl chr 3:109,138,343...109,156,683 		JBrowse link
double-strand break repair via alternative nonhomologous end joining term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Helq helicase, POLQ-like involved_in ISO
IEA		 (PMID:34937945)
GO_REF:0000107		 RGD
Ensembl		 PMID:34937945 GO_REF:0000107 NCBI chr14:9,122,978...9,167,310
Ensembl chr14:8,818,592...8,862,960 		JBrowse link
G Hmces 5-hydroxymethylcytosine binding, ES cell specific involved_in ISO
IEA		 (PMID:31806351)
GO_REF:0000107		 RGD
Ensembl		 PMID:31806351 GO_REF:0000107 NCBI chr 4:121,950,129...121,972,937
Ensembl chr 4:120,366,542...120,415,616 		JBrowse link
G Lig3 DNA ligase 3 involved_in ISO UniProtKB:P13010 (PMID:24837021)
(PMID:21655080)		 RGD PMID:21655080 PMID:24837021 NCBI chr10:68,215,371...68,238,705
Ensembl chr10:67,717,812...67,798,414 		JBrowse link
G Nbn nibrin involved_in IEA
ISO		 GO_REF:0000107
(PMID:28216226)		 Ensembl
RGD		 PMID:28216226 GO_REF:0000107 NCBI chr 5:34,256,678...34,291,163
Ensembl chr 5:29,459,457...29,494,150 		JBrowse link
G Plk1 polo-like kinase 1 involved_in IEA
ISO		 GO_REF:0000107
(PMID:37440612), (PMID:37674080)		 Ensembl
RGD		 PMID:37440612 PMID:37674080 GO_REF:0000107 NCBI chr 1:186,147,658...186,157,637
Ensembl chr 1:176,716,420...176,726,400 		JBrowse link
G Polq DNA polymerase theta involved_in IBA
IEA
ISO		 GO_REF:0000033
GO_REF:0000107
(PMID:25642960), (PMID:29058711)
(PMID:25643323), (PMID:25775267), (PMID:27311885), (PMID:27591252), (PMID:31562312), (PMID:32234782), (PMID:34179826), (PMID:36455556), (PMID:37440612), (PMID:37674080)		 GO_Central
Ensembl
RGD		 PMID:25642960 PMID:25643323 PMID:25775267 PMID:27311885 PMID:27591252 More... GO_REF:0000033 GO_REF:0000107 NCBI chr11:77,179,190...77,281,270
Ensembl chr11:63,673,816...63,775,878 		JBrowse link
G Rhno1 RAD9-HUS1-RAD1 interacting nuclear orphan 1 involved_in ISS
ISO		 GO_REF:0000024
(PMID:37440612)		 UniProt
RGD		 PMID:37440612 GO_REF:0000024 NCBI chr 4:163,320,141...163,325,527
Ensembl chr 4:161,634,048...161,639,371 		JBrowse link
G Topbp1 DNA topoisomerase II binding protein 1 involved_in ISO
IEA		 (PMID:37674080)
GO_REF:0000107		 RGD
Ensembl		 PMID:37674080 GO_REF:0000107 NCBI chr 8:112,766,791...112,815,203
Ensembl chr 8:103,887,865...103,931,674 		JBrowse link
double-strand break repair via break-induced replication term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G AC129365.1 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 Ensembl chr 2:141,551,434...141,554,016 JBrowse link
G Cdc7 cell division cycle 7 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr14:2,949,538...2,969,656
Ensembl chr14:2,804,661...2,824,778 		JBrowse link
G Gins2 GINS complex subunit 2 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr19:65,535,492...65,548,270
Ensembl chr19:48,626,770...48,639,339 		JBrowse link
G Gins4 GINS complex subunit 4 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr16:68,787,572...68,799,938
Ensembl chr16:68,767,339...68,802,273 		JBrowse link
G Mcm2 minichromosome maintenance complex component 2 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr 4:122,903,679...122,918,205
Ensembl chr 4:121,346,434...121,360,847 		JBrowse link
G Mcm3 minichromosome maintenance complex component 3 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr 9:30,715,602...30,733,746
Ensembl chr 9:23,219,169...23,237,314 		JBrowse link
G Mcm4 minichromosome maintenance complex component 4 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr11:98,762,599...98,776,300
Ensembl chr11:85,258,443...85,272,144 		JBrowse link
G Mcm5 minichromosome maintenance complex component 5 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr19:13,488,813...13,510,131
Ensembl chr19:13,483,066...13,504,389 		JBrowse link
G Mcmdc2 minichromosome maintenance domain containing 2 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr 5:14,071,609...14,120,435
Ensembl chr 5:9,298,101...9,338,300 		JBrowse link
G Mus81 MUS81 structure-specific endonuclease subunit involved_in IEA
IBA		 GO_REF:0000104
GO_REF:0000033		 UniProt
GO_Central		 GO_REF:0000033 GO_REF:0000104 NCBI chr 1:212,219,793...212,225,214
Ensembl chr 1:202,790,466...202,795,843 		JBrowse link
double-strand break repair via classical nonhomologous end joining term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Bend2 BEN domain containing 2 acts_upstream_of_or_within ISO (PMID:35613276) RGD PMID:35613276 NCBI chr  X:36,997,518...37,093,363 JBrowse link
G Ercc6 ERCC excision repair 6, chromatin remodeling factor involved_in ISO
IEA		 (PMID:29545921)
GO_REF:0000107		 RGD
Ensembl		 PMID:29545921 GO_REF:0000107 NCBI chr16:7,771,311...7,841,895
Ensembl chr16:7,765,013...7,835,587 		JBrowse link
G Ercc6l2 ERCC excision repair 6 like 2 involved_in ISO (PMID:32355287) RGD PMID:32355287 NCBI chr17:1,076,486...1,311,281
Ensembl chr17:1,216,428...1,310,275 		JBrowse link
G Ercc8 ERCC excision repair 8, CSA ubiquitin ligase complex subunit involved_in ISO
IEA		 (PMID:29545921)
GO_REF:0000107		 RGD
Ensembl		 PMID:29545921 GO_REF:0000107 NCBI chr 2:41,380,901...41,418,294
Ensembl chr 2:39,647,452...39,684,859 		JBrowse link
G Lig4 DNA ligase 4 involved_in ISO (PMID:24837021) RGD PMID:24837021 NCBI chr16:86,220,345...86,228,930
Ensembl chr16:79,518,312...79,527,040 		JBrowse link
G Rnf168 ring finger protein 168 involved_in ISO (PMID:27153538) RGD PMID:27153538 NCBI chr11:81,991,352...82,013,306
Ensembl chr11:68,486,321...68,508,277 		JBrowse link
G Topbp1 DNA topoisomerase II binding protein 1 involved_in ISO
IEA		 (PMID:31135337)
GO_REF:0000107		 RGD
Ensembl		 PMID:31135337 GO_REF:0000107 NCBI chr 8:112,766,791...112,815,203
Ensembl chr 8:103,887,865...103,931,674 		JBrowse link
G Tp53bp1 tumor protein p53 binding protein 1 involved_in ISO
IEA		 (PMID:27153538)
GO_REF:0000107		 RGD
Ensembl		 PMID:27153538 GO_REF:0000107 NCBI chr 3:128,620,320...128,724,716
Ensembl chr 3:108,169,980...108,269,822 		JBrowse link
G Uvrag UV radiation resistance associated involved_in ISO
IEA		 (PMID:22542840)
GO_REF:0000107		 RGD
Ensembl		 PMID:22542840 GO_REF:0000107 NCBI chr 1:162,596,514...162,854,348
Ensembl chr 1:153,185,395...153,442,136 		JBrowse link
G Xrcc6 X-ray repair cross complementing 6 involved_in ISO
IEA		 (PMID:24095731), (PMID:9826654)
GO_REF:0000107		 RGD
Ensembl		 PMID:9826654 PMID:24095731 GO_REF:0000107 NCBI chr 7:115,423,026...115,443,884
Ensembl chr 7:113,543,057...113,563,762 		JBrowse link
G Zbtb7a zinc finger and BTB domain containing 7a involved_in IEA
ISO
ISS		 GO_REF:0000107
(PMID:26446488)
GO_REF:0000024		 Ensembl
RGD
UniProt		 PMID:26446488 GO_REF:0000024 GO_REF:0000107 NCBI chr 7:9,211,733...9,229,273
Ensembl chr 7:8,563,779...8,576,539 		JBrowse link
double-strand break repair via homologous recombination term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ankle1 ankyrin repeat and LEM domain containing 1 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr16:18,109,865...18,116,999
Ensembl chr16:18,076,492...18,083,729 		JBrowse link
G Ap5s1 adaptor related protein complex 5 subunit sigma 1 involved_in ISO
IEA		 (PMID:20613862)
GO_REF:0000002
GO_REF:0000107		 RGD
InterPro
Ensembl		 PMID:20613862 GO_REF:0000002 GO_REF:0000107 NCBI chr 3:118,429,618...118,432,929
Ensembl chr 3:118,429,637...118,432,926 		JBrowse link
G Ap5z1 adaptor related protein complex 5 subunit zeta 1 involved_in ISO (PMID:20613862) RGD PMID:20613862 NCBI chr12:17,207,315...17,222,975
Ensembl chr12:12,093,834...12,108,511 		JBrowse link
G Aste1 asteroid homolog 1 involved_in ISO
IEA		 (PMID:34354233)
GO_REF:0000107		 RGD
Ensembl		 PMID:34354233 GO_REF:0000107 NCBI chr 8:106,026,570...106,044,694
Ensembl chr 8:106,026,515...106,044,430 		JBrowse link
G Atm ATM serine/threonine kinase acts_upstream_of_or_within
involved_in		 ISO MGI:1857132 (PMID:19061978)
(PMID:10802669)		 RGD PMID:10802669 PMID:19061978 NCBI chr 8:62,724,939...62,829,040
Ensembl chr 8:53,831,093...53,932,437 		JBrowse link
G Aunip aurora kinase A and ninein interacting protein involved_in ISS
IEA
ISO		 GO_REF:0000024
GO_REF:0000107
(PMID:29042561)		 UniProt
Ensembl
RGD		 PMID:29042561 GO_REF:0000024 GO_REF:0000107 NCBI chr 5:152,006,021...152,018,614
Ensembl chr 5:146,722,337...146,736,501 		JBrowse link
G Blm BLM RecQ like helicase involved_in ISO
IEA
IBA		 (PMID:23543748)
GO_REF:0000107
GO_REF:0000033		 RGD
Ensembl
GO_Central		 PMID:23543748 GO_REF:0000033 GO_REF:0000107 NCBI chr 1:143,819,072...143,905,300
Ensembl chr 1:134,409,857...134,484,312 		JBrowse link
G Brca1 BRCA1, DNA repair associated involved_in ISO
IBA		 (PMID:17349954), (PMID:28398198)
GO_REF:0000033		 RGD
GO_Central		 PMID:17349954 PMID:28398198 GO_REF:0000033 NCBI chr10:86,917,693...86,978,012
Ensembl chr10:86,418,000...86,477,304 		JBrowse link
G Brca2 BRCA2, DNA repair associated involved_in
acts_upstream_of_or_within		 ISS
IEA
IBA
ISO		 GO_REF:0000024
GO_REF:0000107
GO_REF:0000033
MGI:2653913|MGI:2653914 (PMID:15485900)
GO_REF:0000002
(PMID:20729832), (PMID:21719596), (PMID:28398198)		 UniProt
Ensembl
GO_Central
RGD
InterPro		 PMID:15485900 PMID:20729832 PMID:21719596 PMID:28398198 GO_REF:0000002 GO_REF:0000024 GO_REF:0000033 GO_REF:0000107 NCBI chr12:4,895,092...4,939,340
Ensembl chr12:59,819...100,567 		JBrowse link
G Chd4 chromodomain helicase DNA binding protein 4 involved_in ISO
IEA		 (PMID:25593309)
GO_REF:0000107		 RGD
Ensembl		 PMID:25593309 GO_REF:0000107 NCBI chr 4:159,584,623...159,617,867
Ensembl chr 4:157,899,391...157,931,541 		JBrowse link
G Dmc1 DNA meiotic recombinase 1 involved_in ISO
IEA		 (PMID:17639081)
GO_REF:0000107		 RGD
Ensembl		 PMID:17639081 GO_REF:0000107 NCBI chr 7:113,005,278...113,047,854
Ensembl chr 7:111,124,888...111,167,952 		JBrowse link
G Epc1 enhancer of polycomb homolog 1 involved_in ISO (PMID:27153538) RGD PMID:27153538 NCBI chr17:59,198,513...59,289,535
Ensembl chr17:54,503,358...54,594,425 		JBrowse link
G Ercc4 ERCC excision repair 4, endonuclease catalytic subunit involved_in ISO
IBA		 (PMID:14728600)
GO_REF:0000033		 RGD
GO_Central		 PMID:14728600 GO_REF:0000033 NCBI chr10:2,926,085...2,958,176
Ensembl chr10:2,419,038...2,448,369
Ensembl chr10:2,419,038...2,448,369 		JBrowse link
G Ercc4l1 excision repair cross-complementing rodent repair deficiency, complementation group 4-like 1 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr10:1,462,146...1,500,409
Ensembl chr10:954,977...983,174 		JBrowse link
G Ercc5 ERCC excision repair 5, endonuclease involved_in ISO (PMID:26833090) RGD PMID:26833090 NCBI chr 9:46,309,477...46,354,478
Ensembl chr 9:46,309,389...46,354,472 		JBrowse link
G Exd2 exonuclease 3'-5' domain containing 2 involved_in ISO (PMID:26807646) RGD PMID:26807646 NCBI chr 6:100,116,867...100,150,452
Ensembl chr 6:100,116,867...100,150,442 		JBrowse link
G Fan1 FANCD2 and FANCI associated nuclease 1 involved_in ISO (PMID:20603015), (PMID:20603016) RGD PMID:20603015 PMID:20603016 NCBI chr 1:127,327,098...127,356,807
Ensembl chr 1:117,917,099...117,944,977 		JBrowse link
G Fbh1 F-box DNA helicase 1 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr17:71,659,351...71,697,431
Ensembl chr17:66,749,534...66,787,590 		JBrowse link
G Gen1 GEN1 Holliday junction 5' flap endonuclease involved_in ISO (PMID:23166748) RGD PMID:23166748 NCBI chr 6:39,666,675...39,697,480
Ensembl chr 6:33,948,206...33,978,401 		JBrowse link
G H2ax H2A.X variant histone acts_upstream_of_or_within ISO MGI:2156048 (PMID:11934988) RGD PMID:11934988 NCBI chr 8:53,568,718...53,570,072
Ensembl chr 8:44,671,786...44,673,239
Ensembl chr 4:44,671,786...44,673,239 		JBrowse link
G Helq helicase, POLQ-like involved_in ISO
IEA		 (PMID:19995904)
GO_REF:0000107		 RGD
Ensembl		 PMID:19995904 GO_REF:0000107 NCBI chr14:9,122,978...9,167,310
Ensembl chr14:8,818,592...8,862,960 		JBrowse link
G Htatsf1 HIV-1 Tat specific factor 1 involved_in ISO
IEA		 (PMID:35597237)
GO_REF:0000107		 RGD
Ensembl		 PMID:35597237 GO_REF:0000107 NCBI chr  X:139,972,742...139,986,923
Ensembl chr  X:134,935,426...134,949,607 		JBrowse link
G Hus1 HUS1 checkpoint clamp component involved_in IBA
IEA
ISO		 GO_REF:0000033
GO_REF:0000107
(PMID:16278671)		 GO_Central
Ensembl
RGD		 PMID:16278671 GO_REF:0000033 GO_REF:0000107 NCBI chr14:83,688,702...83,703,466
Ensembl chr14:83,688,708...83,703,442 		JBrowse link
G Inip INTS3 and NABP interacting protein involved_in ISO
IEA		 (PMID:19683501)
GO_REF:0000107		 RGD
Ensembl		 PMID:19683501 GO_REF:0000107 NCBI chr 5:79,443,317...79,457,552
Ensembl chr 5:74,648,392...74,662,628 		JBrowse link
G Ino80 INO80 complex ATPase subunit involved_in ISO
IEA		 (PMID:18026119)
GO_REF:0000107		 RGD
Ensembl		 PMID:18026119 GO_REF:0000107 NCBI chr 3:126,822,280...126,919,532
Ensembl chr 3:106,368,455...106,467,911 		JBrowse link
G Ints3 integrator complex subunit 3 involved_in ISO
IEA		 (PMID:19683501)
GO_REF:0000107		 RGD
Ensembl		 PMID:19683501 GO_REF:0000107 NCBI chr 2:175,859,421...175,911,683
Ensembl chr 2:175,859,440...175,911,709 		JBrowse link
G Kash5 KASH domain containing 5 acts_upstream_of_or_within ISO (PMID:24062341) RGD PMID:24062341 NCBI chr 1:104,805,248...104,827,720
Ensembl chr 1:95,668,886...95,691,368 		JBrowse link
G Kat5 lysine acetyltransferase 5 involved_in ISS
ISO
IBA
IEA		 GO_REF:0000024
(PMID:30297459)
GO_REF:0000033
GO_REF:0000107
(PMID:27153538)		 UniProt
RGD
GO_Central
Ensembl		 PMID:27153538 PMID:30297459 GO_REF:0000024 GO_REF:0000033 GO_REF:0000107 NCBI chr 1:212,325,089...212,332,640
Ensembl chr 1:202,895,751...202,903,458 		JBrowse link
G Kdm4d lysine demethylase 4D acts_upstream_of_or_within ISO (PMID:24550317) RGD PMID:24550317 NCBI chr 8:19,561,253...19,586,412
Ensembl chr 8:11,268,859...11,305,290 		JBrowse link
G LOC120093168 nuclear ubiquitous casein and cyclin-dependent kinase substrate 1-like involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr 6:136,594,866...136,595,965
Ensembl chr 6:136,594,855...136,596,600 		JBrowse link
G Mbtd1 mbt domain containing 1 involved_in ISO
IEA		 (PMID:27153538), (PMID:32209463)
GO_REF:0000107		 RGD
Ensembl		 PMID:27153538 PMID:32209463 GO_REF:0000107 NCBI chr10:79,336,041...79,392,315
Ensembl chr10:78,839,036...78,893,720 		JBrowse link
G Mcm8 minichromosome maintenance 8 homologous recombination repair factor involved_in ISO
IEA
IBA
ISS		 (PMID:23401855)
GO_REF:0000107
(PMID:22771120)
GO_REF:0000033
GO_REF:0000024		 RGD
Ensembl
GO_Central
UniProt		 PMID:22771120 PMID:23401855 GO_REF:0000024 GO_REF:0000033 GO_REF:0000107 NCBI chr 3:140,539,590...140,569,891
Ensembl chr 3:120,086,763...120,117,008 		JBrowse link
G Mcm9 minichromosome maintenance 9 homologous recombination repair factor involved_in ISO
IEA
ISS		 (PMID:22771115), (PMID:23401855)
(PMID:22771120), (PMID:23401855)
GO_REF:0000107
GO_REF:0000024		 RGD
Ensembl
UniProt		 PMID:22771115 PMID:22771120 PMID:23401855 GO_REF:0000024 GO_REF:0000107 NCBI chr20:32,818,219...32,929,577
Ensembl chr20:32,844,951...32,929,600 		JBrowse link
G Meiob meiosis specific with OB-fold involved_in ISS
IEA
ISO		 GO_REF:0000024
GO_REF:0000107
(PMID:24068956), (PMID:24240703)		 UniProt
Ensembl
RGD		 PMID:24068956 PMID:24240703 GO_REF:0000024 GO_REF:0000107 NCBI chr10:14,336,869...14,369,566
Ensembl chr10:13,833,750...13,865,046 		JBrowse link
G Mms22l MMS22-like, DNA repair protein involved_in ISO
IEA
IBA		 (PMID:21055983), (PMID:21055984), (PMID:21055985), (PMID:27797818)
GO_REF:0000107
GO_REF:0000002
GO_REF:0000033		 RGD
Ensembl
InterPro
GO_Central		 PMID:21055983 PMID:21055984 PMID:21055985 PMID:27797818 GO_REF:0000002 GO_REF:0000033 GO_REF:0000107 NCBI chr 5:42,994,382...43,110,371
Ensembl chr 5:38,197,779...38,313,745 		JBrowse link
G Morf4l1 mortality factor 4 like 1 involved_in ISO
IEA
ISS		 (PMID:20332121)
GO_REF:0000107
GO_REF:0000024		 RGD
Ensembl
UniProt		 PMID:20332121 GO_REF:0000024 GO_REF:0000107 NCBI chr 8:99,522,801...99,544,432
Ensembl chr 8:90,642,988...90,664,519 		JBrowse link
G Mre11 MRE11 homolog, double strand break repair nuclease involved_in ISS
IBA
ISO		 GO_REF:0000024
GO_REF:0000033
(PMID:18854157)
(PMID:15741314), (PMID:24316220), (PMID:27814491), (PMID:27889449), (PMID:28867292), (PMID:29670289), (PMID:30612738), (PMID:30787182), (PMID:31353207), (PMID:36563124), (PMID:38128537)		 UniProt
GO_Central
RGD		 PMID:15741314 PMID:18854157 PMID:24316220 PMID:27814491 PMID:27889449 More... GO_REF:0000024 GO_REF:0000033 NCBI chr 8:19,900,211...19,961,906
Ensembl chr 8:11,632,354...11,678,279 		JBrowse link
G Nabp1 nucleic acid binding protein 1 involved_in ISS
IBA
ISO		 GO_REF:0000024
GO_REF:0000033
(PMID:19605351), (PMID:19683501)		 UniProt
GO_Central
RGD		 PMID:19605351 PMID:19683501 GO_REF:0000024 GO_REF:0000033 NCBI chr 9:50,098,552...50,133,982
Ensembl chr 9:50,126,726...50,134,107 		JBrowse link
G Nabp2 nucleic acid binding protein 2 involved_in ISS
IBA
IEA
ISO		 GO_REF:0000024
GO_REF:0000033
GO_REF:0000107
(PMID:19605351), (PMID:19683501)		 UniProt
GO_Central
Ensembl
RGD		 PMID:19605351 PMID:19683501 GO_REF:0000024 GO_REF:0000033 GO_REF:0000107 NCBI chr 7:830,949...836,551
Ensembl chr 7:830,949...838,027 		JBrowse link
G Nbn nibrin involved_in IEA
IBA
ISO		 GO_REF:0000107
GO_REF:0000033
(PMID:22464731), (PMID:23115235), (PMID:27814491), (PMID:27889449), (PMID:28867292), (PMID:30787182), (PMID:30952868), (PMID:38961290)		 Ensembl
GO_Central
RGD		 PMID:22464731 PMID:23115235 PMID:27814491 PMID:27889449 PMID:28867292 More... GO_REF:0000033 GO_REF:0000107 NCBI chr 5:34,256,678...34,291,163
Ensembl chr 5:29,459,457...29,494,150 		JBrowse link
G Nsmce1 NSE1 homolog, SMC5-SMC6 complex component involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr 1:180,030,355...180,058,541
Ensembl chr 1:180,030,160...180,058,417 		JBrowse link
G Nsmce2 NSE2/MMS21 homolog, SMC5-SMC6 complex SUMO ligase involved_in ISO
IBA
IEA
ISS		 (PMID:16810316)
GO_REF:0000033
GO_REF:0000107
GO_REF:0000024
GO_REF:0000002		 RGD
GO_Central
Ensembl
UniProt
InterPro		 PMID:16810316 GO_REF:0000002 GO_REF:0000024 GO_REF:0000033 GO_REF:0000107 NCBI chr 7:92,825,568...93,071,037
Ensembl chr 7:90,936,112...91,164,899 		JBrowse link
G Nucks1 nuclear casein kinase and cyclin-dependent kinase substrate 1 involved_in ISO
IBA		 (PMID:26323318)
GO_REF:0000033		 RGD
GO_Central		 PMID:26323318 GO_REF:0000033 NCBI chr13:45,897,275...45,926,491
Ensembl chr13:43,345,115...43,370,229 		JBrowse link
G Palb2 partner and localizer of BRCA2 involved_in ISO
IEA
IBA		 (PMID:19369211), (PMID:19423707), (PMID:26323318), (PMID:28398198)
GO_REF:0000107
GO_REF:0000002
GO_REF:0000033		 RGD
Ensembl
InterPro
GO_Central		 PMID:19369211 PMID:19423707 PMID:26323318 PMID:28398198 GO_REF:0000002 GO_REF:0000033 GO_REF:0000107 NCBI chr 1:186,096,312...186,120,284
Ensembl chr 1:176,665,076...176,688,990 		JBrowse link
G Pogz pogo transposable element derived with ZNF domain acts_upstream_of_or_within_positive_effect ISO (PMID:26721387) RGD PMID:26721387 NCBI chr 2:182,394,269...182,440,711
Ensembl chr 2:182,380,768...182,440,707 		JBrowse link
G Poll DNA polymerase lambda involved_in ISO
IEA
ISS		 (PMID:20693240)
GO_REF:0000107
GO_REF:0000024		 RGD
Ensembl
UniProt		 PMID:20693240 GO_REF:0000024 GO_REF:0000107 NCBI chr 1:254,349,229...254,357,689
Ensembl chr 1:244,400,204...244,408,662 		JBrowse link
G Poln DNA polymerase nu involved_in ISO (PMID:19995904) RGD PMID:19995904 NCBI chr14:76,579,983...76,752,460
Ensembl chr14:76,580,546...76,752,463 		JBrowse link
G Ppp4c protein phosphatase 4, catalytic subunit involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr 1:190,823,447...190,830,247
Ensembl chr 1:181,392,923...181,399,659 		JBrowse link
G Psmd14 proteasome 26S subunit, non-ATPase 14 involved_in ISO
IEA		 (PMID:22909820)
GO_REF:0000107		 RGD
Ensembl		 PMID:22909820 GO_REF:0000107 NCBI chr 3:66,662,933...66,755,666
Ensembl chr 3:46,254,330...46,347,076 		JBrowse link
G Rad21l1 RAD21 cohesin complex component like 1 acts_upstream_of_or_within ISO
IEA		 MGI:1929645 (PMID:22711701)
GO_REF:0000107		 RGD
Ensembl		 PMID:22711701 GO_REF:0000107 NCBI chr 3:160,620,500...160,648,716
Ensembl chr 3:140,160,118...140,188,298 		JBrowse link
G Rad50 RAD50 double strand break repair protein involved_in IEA
ISO		 GO_REF:0000107
(PMID:27889449), (PMID:28867292)		 Ensembl
RGD		 PMID:27889449 PMID:28867292 GO_REF:0000107 NCBI chr10:38,310,147...38,362,100
Ensembl chr10:37,808,726...37,861,396 		JBrowse link
G Rad51 RAD51 recombinase acts_upstream_of_or_within
involved_in		 IEP
IEA
ISO		 GO_REF:0000107
GO_REF:0000002
(PMID:15359272), (PMID:15485900)
(PMID:15834424)
(PMID:17996710), (PMID:17996711), (PMID:18417535), (PMID:22778135), (PMID:23509288), (PMID:26681308), (PMID:26811421), (PMID:27239033), (PMID:32640219)
(PMID:16428451)		 Ensembl
InterPro
RGD		 PMID:15359272 PMID:15485900 PMID:15834424 PMID:16428451 PMID:17996710 More... GO_REF:0000002 GO_REF:0000107, RGD:9831188 NCBI chr 3:126,554,210...126,578,888
Ensembl chr 3:106,100,381...106,125,035 		JBrowse link
G Rad51ap1 RAD51 associated protein 1 involved_in ISO
IEA
IBA		 (PMID:26323318)
GO_REF:0000107
GO_REF:0000033		 RGD
Ensembl
GO_Central		 PMID:26323318 GO_REF:0000033 GO_REF:0000107 NCBI chr 4:161,445,610...161,458,661
Ensembl chr 4:159,759,459...159,772,524 		JBrowse link
G Rad51b RAD51 paralog B involved_in ISO
IEA
IBA		 (PMID:23149936)
GO_REF:0000002
GO_REF:0000033		 RGD
InterPro
GO_Central		 PMID:23149936 GO_REF:0000002 GO_REF:0000033 NCBI chr 6:103,829,390...104,373,923
Ensembl chr 6:98,098,868...98,640,979 		JBrowse link
G Rad51c RAD51 paralog C involved_in ISO
IEA		 (PMID:23149936)
GO_REF:0000107		 RGD
Ensembl		 PMID:23149936 GO_REF:0000107 NCBI chr10:72,702,299...72,728,980
Ensembl chr10:72,205,032...72,231,248 		JBrowse link
G Rad51d RAD51 paralog D involved_in ISO (PMID:23149936) RGD PMID:23149936 NCBI chr10:68,303,350...68,322,002
Ensembl chr10:67,740,712...67,824,434 		JBrowse link
G Rad52 RAD52 homolog, DNA repair protein involved_in
acts_upstream_of_or_within		 IBA
IEA
ISO		 GO_REF:0000033
GO_REF:0000107
GO_REF:0000002
(PMID:12379650)		 GO_Central
Ensembl
InterPro
RGD		 PMID:12379650 GO_REF:0000002 GO_REF:0000033 GO_REF:0000107 NCBI chr 4:154,778,320...154,802,002
Ensembl chr 4:153,106,062...153,128,207 		JBrowse link
G Rad54b RAD54 homolog B acts_upstream_of_or_within ISO
IEA		 (PMID:16428451)
GO_REF:0000107
MGI:3617695|MGI:894697 (PMID:16428451), (PMID:19061978)		 RGD
Ensembl		 PMID:16428451 PMID:19061978 GO_REF:0000107 NCBI chr 5:29,829,465...29,901,967
Ensembl chr 5:25,032,066...25,104,616 		JBrowse link
G Rad54l RAD54 like acts_upstream_of_or_within ISO
IEA		 MGI:2183934|MGI:3605986 (PMID:16428451), (PMID:19061978)
GO_REF:0000107		 RGD
Ensembl		 PMID:16428451 PMID:19061978 GO_REF:0000107 NCBI chr 5:134,812,158...134,841,821
Ensembl chr 5:129,575,378...129,605,070 		JBrowse link
G Rbbp8 RB binding protein 8, endonuclease involved_in ISS
IEA
ISO		 GO_REF:0000024
GO_REF:0000107
(PMID:26721387), (PMID:27814491), (PMID:27889449), (PMID:30787182)		 UniProt
Ensembl
RGD		 PMID:26721387 PMID:27814491 PMID:27889449 PMID:30787182 GO_REF:0000024 GO_REF:0000107 NCBI chr18:3,198,188...3,263,643
Ensembl chr18:2,921,286...2,988,846 		JBrowse link
G Rec8 REC8 meiotic recombination protein acts_upstream_of_or_within ISO
IEA		 MGI:3652039 (PMID:22711701)
GO_REF:0000107		 RGD
Ensembl		 PMID:22711701 GO_REF:0000107 NCBI chr15:33,079,818...33,087,283
Ensembl chr15:29,109,863...29,117,326 		JBrowse link
G Recql RecQ like helicase involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr 4:175,308,337...175,332,965
Ensembl chr 4:175,304,117...175,332,945 		JBrowse link
G Recql4 RecQ like helicase 4 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr 7:110,304,092...110,311,426
Ensembl chr 7:108,423,455...108,430,619 		JBrowse link
G Recql5 RecQ like helicase 5 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr10:101,625,477...101,664,582
Ensembl chr10:101,126,547...101,165,652 		JBrowse link
G Rev3l REV3 like, DNA directed polymerase zeta catalytic subunit involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr20:44,686,482...44,844,668
Ensembl chr20:43,132,363...43,290,099 		JBrowse link
G RFFL ring finger and FYVE like domain containing E3 ubiquitin protein ligase involved_in IEA
IBA		 Ensembl
GO_Central		 GO_REF:0000033 GO_REF:0000107
G Rfwd3 ring finger and WD repeat domain 3 involved_in ISO (PMID:26474068), (PMID:28575657), (PMID:28575658), (PMID:28691929) RGD PMID:26474068 PMID:28575657 PMID:28575658 PMID:28691929 NCBI chr19:56,145,221...56,177,871
Ensembl chr19:39,236,787...39,268,479 		JBrowse link
G Rmi1 RecQ mediated genome instability 1 involved_in ISO
IEA
IBA		 (PMID:23543748)
GO_REF:0000107
GO_REF:0000033		 RGD
Ensembl
GO_Central		 PMID:23543748 GO_REF:0000033 GO_REF:0000107 NCBI chr17:6,261,961...6,269,947
Ensembl chr17:6,256,450...6,264,695 		JBrowse link
G Rmi2 RecQ mediated genome instability 2 involved_in ISO (PMID:23543748) RGD PMID:23543748 NCBI chr10:5,336,269...5,344,202
Ensembl chr10:4,830,553...4,837,235 		JBrowse link
G Rnf138 ring finger protein 138 involved_in ISO
IEA
IBA
ISS		 (PMID:26502055), (PMID:26502057)
GO_REF:0000107
GO_REF:0000033
GO_REF:0000024		 RGD
Ensembl
GO_Central
UniProt		 PMID:26502055 PMID:26502057 GO_REF:0000024 GO_REF:0000033 GO_REF:0000107 NCBI chr18:12,291,557...12,315,931
Ensembl chr18:12,291,590...12,315,930 		JBrowse link
G Rnf138l1 ring finger protein 138 like 1 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr  X:30,739,541...30,740,614
Ensembl chr  X:30,739,413...30,740,613 		JBrowse link
G Rnf169 ring finger protein 169 involved_in ISO (PMID:22492721) RGD PMID:22492721 NCBI chr 1:163,662,582...163,724,154
Ensembl chr 1:154,254,473...154,311,653 		JBrowse link
G Rpa1 replication protein A1 involved_in
acts_upstream_of_or_within		 ISO
IEA
IBA		 (PMID:17765923)
GO_REF:0000107
GO_REF:0000033
MGI:3582609 (PMID:15470499)		 RGD
Ensembl
GO_Central		 PMID:15470499 PMID:17765923 GO_REF:0000033 GO_REF:0000107 NCBI chr10:60,647,185...60,698,279
Ensembl chr10:60,148,793...60,199,949 		JBrowse link
G Rpa2 replication protein A2 involved_in ISS
IBA
ISO		 GO_REF:0000024
GO_REF:0000033
(PMID:17765923)		 UniProt
GO_Central
RGD		 PMID:17765923 GO_REF:0000024 GO_REF:0000033 NCBI chr 5:150,260,668...150,271,329
Ensembl chr 5:144,976,748...144,987,350 		JBrowse link
G Rpa3 replication protein A3 involved_in ISO
IBA		 (PMID:17765923)
GO_REF:0000033		 RGD
GO_Central		 PMID:17765923 GO_REF:0000033 NCBI chr 4:37,270,966...37,273,997
Ensembl chr 4:36,304,651...36,307,709 		JBrowse link
G Rpa3l1 replication protein A3 like 1 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr12:45,908,653...45,909,063
Ensembl chr12:45,908,683...45,909,048 		JBrowse link
G Samhd1 SAM and HD domain containing deoxynucleoside triphosphate triphosphohydrolase 1 involved_in ISO
IEA		 (PMID:28834754), (PMID:29670289)
GO_REF:0000107		 RGD
Ensembl		 PMID:28834754 PMID:29670289 GO_REF:0000107 NCBI chr 3:166,179,742...166,214,448
Ensembl chr 3:145,761,558...145,794,386 		JBrowse link
G Sem1 SEM1 26S proteasome subunit involved_in
acts_upstream_of_or_within		 IBA
IEA
ISO		 GO_REF:0000033
GO_REF:0000107
(PMID:15359272)		 GO_Central
Ensembl
RGD		 PMID:15359272 GO_REF:0000033 GO_REF:0000107 NCBI chr 4:34,671,848...34,692,005
Ensembl chr 4:34,671,848...34,692,005 		JBrowse link
G Sfpq splicing factor proline and glutamine rich acts_upstream_of_or_within ISO
IEA		 (PMID:20813759)
GO_REF:0000107		 RGD
Ensembl		 PMID:20813759 GO_REF:0000107 NCBI chr 5:144,621,678...144,637,930
Ensembl chr 5:139,338,075...139,353,472 		JBrowse link
G Sfr1 SWI5-dependent homologous recombination repair protein 1 involved_in ISS
IEA
ISO
IBA		 GO_REF:0000024
GO_REF:0000002
(PMID:20976249)
GO_REF:0000033
GO_REF:0000107
(PMID:21252223)		 UniProt
InterPro
RGD
GO_Central
Ensembl		 PMID:20976249 PMID:21252223 GO_REF:0000002 GO_REF:0000024 GO_REF:0000033 GO_REF:0000107 NCBI chr 1:256,560,533...256,564,547
Ensembl chr 1:246,597,044...246,623,250 		JBrowse link
G Slx1b SLX1 homolog B, structure-specific endonuclease subunit involved_in ISO
IBA		 (PMID:19595721)
GO_REF:0000033		 RGD
GO_Central		 PMID:19595721 GO_REF:0000033 NCBI chr 1:181,286,190...181,291,739
Ensembl chr 1:181,283,921...181,291,775 		JBrowse link
G Slx4 SLX4 structure-specific endonuclease subunit involved_in ISO
IEA		 (PMID:19595721), (PMID:19596235)
GO_REF:0000107		 RGD
Ensembl		 PMID:19595721 PMID:19596235 GO_REF:0000107 NCBI chr10:12,032,131...12,055,685
Ensembl chr10:11,528,424...11,549,295 		JBrowse link
G Smc5 structural maintenance of chromosomes 5 involved_in ISO
IBA		 (PMID:16810316)
GO_REF:0000033		 RGD
GO_Central		 PMID:16810316 GO_REF:0000033 NCBI chr 1:230,195,894...230,265,677
Ensembl chr 1:220,769,366...220,839,096 		JBrowse link
G Smc6 structural maintenance of chromosomes 6 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr 6:39,697,810...39,752,275
Ensembl chr 6:33,978,716...34,031,746 		JBrowse link
G Spidr scaffold protein involved in DNA repair involved_in ISO
IBA		 (PMID:23509288), (PMID:27967308), (PMID:34697795)
GO_REF:0000033		 RGD
GO_Central		 PMID:23509288 PMID:27967308 PMID:34697795 GO_REF:0000033 NCBI chr11:98,270,779...98,511,760
Ensembl chr11:84,766,593...85,007,600 		JBrowse link
G Swi5 SWI5 homologous recombination repair protein involved_in ISS
IBA
ISO		 GO_REF:0000024
GO_REF:0000033
(PMID:20976249)
(PMID:21252223)		 UniProt
GO_Central
RGD		 PMID:20976249 PMID:21252223 GO_REF:0000024 GO_REF:0000033 NCBI chr 3:15,574,687...15,583,760
Ensembl chr 3:15,564,715...15,583,805 		JBrowse link
G Swsap1 SWIM-type zinc finger 7 associated protein 1 involved_in ISO
IBA		 (PMID:21965664)
GO_REF:0000033		 RGD
GO_Central		 PMID:21965664 GO_REF:0000033 NCBI chr 8:20,486,680...20,489,213
Ensembl chr 8:20,486,678...20,489,211 		JBrowse link
G Tonsl tonsoku-like, DNA repair protein involved_in ISS
IEA
IBA
ISO		 GO_REF:0000024
GO_REF:0000107
GO_REF:0000033
(PMID:21055983), (PMID:21055984), (PMID:21055985), (PMID:27338793), (PMID:27797818), (PMID:30773278)		 UniProt
Ensembl
GO_Central
RGD		 PMID:21055983 PMID:21055984 PMID:21055985 PMID:27338793 PMID:27797818 More... GO_REF:0000024 GO_REF:0000033 GO_REF:0000107 NCBI chr 7:110,226,696...110,241,459
Ensembl chr 7:108,346,047...108,360,750 		JBrowse link
G Top3a DNA topoisomerase III alpha involved_in ISO
IEA		 (PMID:23543748)
GO_REF:0000107		 RGD
Ensembl		 PMID:23543748 GO_REF:0000107 NCBI chr10:45,419,219...45,457,356
Ensembl chr10:45,419,217...45,457,559 		JBrowse link
G Topbp1 DNA topoisomerase II binding protein 1 involved_in ISO
IEA		 (PMID:26811421), (PMID:35597237)
GO_REF:0000107		 RGD
Ensembl		 PMID:26811421 PMID:35597237 GO_REF:0000107 NCBI chr 8:112,766,791...112,815,203
Ensembl chr 8:103,887,865...103,931,674 		JBrowse link
G Ube2n ubiquitin-conjugating enzyme E2N acts_upstream_of ISO (PMID:17349954) RGD PMID:17349954 NCBI chr 7:32,041,190...32,071,252
Ensembl chr 7:30,154,616...30,184,355 		JBrowse link
G Wdr48 WD repeat domain 48 involved_in
acts_upstream_of_or_within		 IBA
IEA
ISO		 GO_REF:0000033
GO_REF:0000107
MGI:3877670 (PMID:24001775)		 GO_Central
Ensembl
RGD		 PMID:24001775 GO_REF:0000033 GO_REF:0000107 NCBI chr 8:128,499,721...128,532,930
Ensembl chr 8:119,622,048...119,655,264 		JBrowse link
G Wrn WRN RecQ like helicase involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr16:65,466,552...65,602,951
Ensembl chr16:58,763,504...58,895,450 		JBrowse link
G Xrcc2 X-ray repair cross complementing 2 involved_in
acts_upstream_of_or_within		 ISO
IEA
IBA		 (PMID:23149936)
GO_REF:0000107
GO_REF:0000002
MGI:3654106 (PMID:16777961)
GO_REF:0000033		 RGD
Ensembl
InterPro
GO_Central		 PMID:16777961 PMID:23149936 GO_REF:0000002 GO_REF:0000033 GO_REF:0000107 NCBI chr 4:10,157,130...10,237,089
Ensembl chr 4:9,423,898...9,442,482 		JBrowse link
G Xrcc3 X-ray repair cross complementing 3 involved_in ISO
IEA		 (PMID:23149936)
GO_REF:0000107		 RGD
Ensembl		 PMID:23149936 GO_REF:0000107 NCBI chr 6:136,684,558...136,694,822
Ensembl chr 6:130,863,959...130,872,444 		JBrowse link
G Yy1 YY1 transcription factor involved_in ISO
IEA		 (PMID:18026119)
GO_REF:0000107		 RGD
Ensembl		 PMID:18026119 GO_REF:0000107 NCBI chr 6:133,471,615...133,500,875
Ensembl chr 6:127,707,596...127,732,747 		JBrowse link
G Zfyve26 zinc finger FYVE-type containing 26 involved_in ISO
IEA		 (PMID:20613862)
GO_REF:0000107
GO_REF:0000002		 RGD
Ensembl
InterPro		 PMID:20613862 GO_REF:0000002 GO_REF:0000107 NCBI chr 6:98,031,874...98,095,538
Ensembl chr 6:98,032,520...98,095,480 		JBrowse link
G Zmynd8 zinc finger, MYND-type containing 8 involved_in ISO
IEA		 (PMID:25593309)
GO_REF:0000107		 RGD
Ensembl		 PMID:25593309 GO_REF:0000107 NCBI chr 3:174,948,162...175,061,382
Ensembl chr 3:154,529,043...154,628,463 		JBrowse link
G Zswim7 zinc finger, SWIM-type containing 7 involved_in ISO
IBA		 (PMID:21965664)
GO_REF:0000033		 RGD
GO_Central		 PMID:21965664 GO_REF:0000033 NCBI chr10:46,953,311...46,969,800
Ensembl chr10:46,957,525...46,969,671 		JBrowse link
double-strand break repair via nonhomologous end joining term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Aplf aprataxin and PNKP like factor involved_in
acts_upstream_of_or_within		 ISO (PMID:23689425)
UniProtKB:Q9Y6F1 (PMID:21211721)		 RGD PMID:21211721 PMID:23689425 NCBI chr 4:121,627,800...121,679,980
Ensembl chr 4:120,070,471...120,122,633 		JBrowse link
G Aste1 asteroid homolog 1 involved_in ISO
IEA		 (PMID:34354233)
GO_REF:0000107		 RGD
Ensembl		 PMID:34354233 GO_REF:0000107 NCBI chr 8:106,026,570...106,044,694
Ensembl chr 8:106,026,515...106,044,430 		JBrowse link
G Cyren cell cycle regulator of NHEJ involved_in ISO
IBA
IEA
ISS		 (PMID:24610814)
(PMID:30017584)
GO_REF:0000033
GO_REF:0000107
GO_REF:0000024		 RGD
GO_Central
Ensembl
UniProt		 PMID:24610814 PMID:30017584 GO_REF:0000024 GO_REF:0000033 GO_REF:0000107 NCBI chr 4:64,514,477...64,519,896
Ensembl chr 4:63,547,335...63,551,602 		JBrowse link
G Dclre1a DNA cross-link repair 1A involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr 1:255,569,911...255,589,815
Ensembl chr 1:255,569,919...255,589,678 		JBrowse link
G Dclre1b DNA cross-link repair 1B involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr 2:191,309,909...191,318,399
Ensembl chr 2:191,309,913...191,318,423 		JBrowse link
G Dclre1c DNA cross-link repair 1C involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr17:79,684,988...79,718,399
Ensembl chr17:74,776,935...74,809,186 		JBrowse link
G Dntt DNA nucleotidylexotransferase involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr 1:249,805,802...249,837,685
Ensembl chr 1:239,856,391...239,888,282 		JBrowse link
G Ercc1 ERCC excision repair 1, endonuclease non-catalytic subunit involved_in ISO (PMID:14690602) RGD PMID:14690602 NCBI chr 1:88,099,308...88,135,966
Ensembl chr 1:78,996,390...79,007,963 		JBrowse link
G Ercc4 ERCC excision repair 4, endonuclease catalytic subunit involved_in ISO (PMID:14690602) RGD PMID:14690602 NCBI chr10:2,926,085...2,958,176
Ensembl chr10:2,419,038...2,448,369
Ensembl chr10:2,419,038...2,448,369 		JBrowse link
G Hmgb1 high mobility group box 1 involved_in ISO (PMID:9600082) RGD PMID:9600082 NCBI chr12:11,009,236...11,015,941
Ensembl chr12:5,901,586...5,978,565
Ensembl chr16:5,901,586...5,978,565 		JBrowse link
G Hmgb2 high mobility group box 2 involved_in ISO (PMID:9600082) RGD PMID:9600082 NCBI chr16:37,721,374...37,723,950
Ensembl chr16:32,710,658...32,713,140
Ensembl chr 1:32,710,658...32,713,140 		JBrowse link
G Iffo1 intermediate filament family orphan 1 involved_in ISO (PMID:31548606) RGD PMID:31548606 NCBI chr 4:159,631,309...159,648,531
Ensembl chr 4:157,945,107...157,962,302 		JBrowse link
G Kdm2a lysine demethylase 2A involved_in ISO
IEA		 (PMID:21187428)
GO_REF:0000107		 RGD
Ensembl		 PMID:21187428 GO_REF:0000107 NCBI chr 1:211,041,859...211,125,749
Ensembl chr 1:201,612,453...201,680,787 		JBrowse link
G Lig1 DNA ligase 1 acts_upstream_of_or_within ISO (PMID:21655080) RGD PMID:21655080 NCBI chr 1:83,243,043...83,281,707
Ensembl chr 1:74,165,842...74,204,413 		JBrowse link
G Lig3 DNA ligase 3 acts_upstream_of_or_within ISO (PMID:21655080) RGD PMID:21655080 NCBI chr10:68,215,371...68,238,705
Ensembl chr10:67,717,812...67,798,414 		JBrowse link
G Lig4 DNA ligase 4 involved_in
acts_upstream_of_or_within		 ISO
IBA		 UniProtKB:Q15554 (PMID:12517771), (PMID:17290226), (PMID:23275564), (PMID:9809069)
(PMID:12361565)
MGI:1857720|MGI:1857732 (PMID:10823907), (PMID:16777961)
GO_REF:0000033		 RGD
GO_Central		 PMID:9809069 PMID:10823907 PMID:12361565 PMID:12517771 PMID:16777961 More... GO_REF:0000033 NCBI chr16:86,220,345...86,228,930
Ensembl chr16:79,518,312...79,527,040 		JBrowse link
G Mlh1 mutL homolog 1 acts_upstream_of_or_within ISO
IEA		 MGI:1857946 (PMID:15084308)
GO_REF:0000107		 RGD
Ensembl		 PMID:15084308 GO_REF:0000107 NCBI chr 8:120,074,871...120,112,109
Ensembl chr 8:111,196,468...111,233,617 		JBrowse link
G Mre11 MRE11 homolog, double strand break repair nuclease involved_in ISO
ISS
IBA		 (PMID:9651580)
GO_REF:0000024
GO_REF:0000033		 RGD
UniProt
GO_Central		 PMID:9651580 GO_REF:0000024 GO_REF:0000033 NCBI chr 8:19,900,211...19,961,906
Ensembl chr 8:11,632,354...11,678,279 		JBrowse link
G Nhej1 nonhomologous end-joining factor 1 involved_in ISS
IEA
ISO
IBA		 PMID:16439205
GO_REF:0000107
(PMID:27798842), (PMID:28051062)
GO_REF:0000033
GO_REF:0000117
(PMID:16439204), (PMID:16439205), (PMID:17717001), (PMID:18158905), (PMID:18644470), (PMID:19056826), (PMID:20558749), (PMID:27437582), (PMID:28500754), (PMID:30250067)
GO_REF:0000024		 Ensembl
RGD
GO_Central
UniProt		 PMID:16439204 PMID:16439205 PMID:17717001 PMID:18158905 PMID:18644470 More... GO_REF:0000024 GO_REF:0000033 GO_REF:0000107 GO_REF:0000117, RGD:8553261 NCBI chr 9:83,974,995...84,071,161
Ensembl chr 9:76,526,324...76,622,444 		JBrowse link
G Nsmce2 NSE2/MMS21 homolog, SMC5-SMC6 complex SUMO ligase NOT|involved_in ISO (PMID:16810316) RGD PMID:16810316 NCBI chr 7:92,825,568...93,071,037
Ensembl chr 7:90,936,112...91,164,899 		JBrowse link
G Parp3 poly (ADP-ribose) polymerase family, member 3 acts_upstream_of_or_within IEA
ISO		 GO_REF:0000107
UniProtKB:Q8IW19 (PMID:21211721)		 Ensembl
RGD		 PMID:21211721 GO_REF:0000107 NCBI chr 8:115,989,721...115,995,822
Ensembl chr 8:107,111,012...107,116,782 		JBrowse link
G Paxx PAXX, non-homologous end joining factor involved_in ISO
IEA
IBA		 (PMID:25574025), (PMID:25670504), (PMID:25941166), (PMID:30250067)
GO_REF:0000002
GO_REF:0000107
(PMID:27798842), (PMID:28051062)
GO_REF:0000033		 RGD
InterPro
Ensembl
GO_Central		 PMID:25574025 PMID:25670504 PMID:25941166 PMID:27798842 PMID:28051062 More... GO_REF:0000002 GO_REF:0000033 GO_REF:0000107 NCBI chr 3:28,672,906...28,676,252
Ensembl chr 3:8,274,762...8,276,521 		JBrowse link
G Pnkp polynucleotide kinase 3'-phosphatase involved_in ISO
IEA		 (PMID:15385968), (PMID:28453785)
GO_REF:0000107		 RGD
Ensembl		 PMID:15385968 PMID:28453785 GO_REF:0000107 NCBI chr 1:104,476,801...104,483,409
Ensembl chr 1:95,341,620...95,346,920 		JBrowse link
G Pola1 DNA polymerase alpha 1, catalytic subunit involved_in ISO
ISS		 (PMID:11470886)
GO_REF:0000024		 RGD
UniProt		 PMID:11470886 GO_REF:0000024 NCBI chr  X:62,028,475...62,342,455
Ensembl chr  X:58,034,619...58,348,536 		JBrowse link
G Polb DNA polymerase beta involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr16:76,081,903...76,105,174
Ensembl chr16:69,379,400...69,404,812 		JBrowse link
G Poll DNA polymerase lambda involved_in ISS
IEA
IBA
ISO		 GO_REF:0000024
GO_REF:0000107
GO_REF:0000033
(PMID:19806195), (PMID:30250067)		 UniProt
Ensembl
GO_Central
RGD		 PMID:19806195 PMID:30250067 GO_REF:0000024 GO_REF:0000033 GO_REF:0000107 NCBI chr 1:254,349,229...254,357,689
Ensembl chr 1:244,400,204...244,408,662 		JBrowse link
G Polm DNA polymerase mu involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr14:84,921,039...84,930,649
Ensembl chr14:80,706,345...80,717,086 		JBrowse link
G Prkdc protein kinase, DNA-activated, catalytic subunit acts_upstream_of_or_within
involved_in		 ISO
IEA		 (PMID:23836881)
GO_REF:0000107
GO_REF:0000002		 RGD
Ensembl
InterPro		 PMID:23836881 GO_REF:0000002 GO_REF:0000107 NCBI chr11:98,544,952...98,762,499
Ensembl chr11:85,040,792...85,257,952 		JBrowse link
G Prpf19 pre-mRNA processing factor 19 involved_in ISO
IEA
ISS		 (PMID:18263876)
GO_REF:0000107
GO_REF:0000024		 RGD
Ensembl
UniProt		 PMID:18263876 GO_REF:0000024 GO_REF:0000107 NCBI chr 1:216,966,104...216,977,549
Ensembl chr 1:207,541,595...207,552,662 		JBrowse link
G Psmd14 proteasome 26S subunit, non-ATPase 14 involved_in ISO
IEA		 (PMID:22909820)
GO_REF:0000107		 RGD
Ensembl		 PMID:22909820 GO_REF:0000107 NCBI chr 3:66,662,933...66,755,666
Ensembl chr 3:46,254,330...46,347,076 		JBrowse link
G Rnf168 ring finger protein 168 involved_in ISO (PMID:27153538) RGD PMID:27153538 NCBI chr11:81,991,352...82,013,306
Ensembl chr11:68,486,321...68,508,277 		JBrowse link
G Rnf8 ring finger protein 8 involved_in ISS
ISO		 GO_REF:0000024
(PMID:21857671), (PMID:22266820)		 UniProt
RGD		 PMID:21857671 PMID:22266820 GO_REF:0000024 NCBI chr20:7,683,890...7,708,437
Ensembl chr20:7,682,322...7,708,491 		JBrowse link
G Setmar SET domain and mariner transposase fusion gene involved_in ISO (PMID:16332963), (PMID:18263876), (PMID:21187428), (PMID:24573677) RGD PMID:16332963 PMID:18263876 PMID:21187428 PMID:24573677 NCBI chr 4:142,602,066...142,614,208
Ensembl chr 4:141,046,069...141,058,197 		JBrowse link
G Smarcal1 SNF2 related chromatin remodeling annealing helicase 1 involved_in ISO
IEA		 (PMID:26089390)
GO_REF:0000107		 RGD
Ensembl		 PMID:26089390 GO_REF:0000107 NCBI chr 9:74,239,718...74,286,156
Ensembl chr 9:74,240,241...74,286,146 		JBrowse link
G Smc5 structural maintenance of chromosomes 5 NOT|involved_in ISO (PMID:16810316) RGD PMID:16810316 NCBI chr 1:230,195,894...230,265,677
Ensembl chr 1:220,769,366...220,839,096 		JBrowse link
G Tp53bp1 tumor protein p53 binding protein 1 involved_in ISO
IEA		 (PMID:23333306), (PMID:23760478), (PMID:27153538), (PMID:28241136), (PMID:31135337)
GO_REF:0000107
(PMID:20362325), (PMID:23333305)		 RGD
Ensembl		 PMID:20362325 PMID:23333305 PMID:23333306 PMID:23760478 PMID:27153538 More... GO_REF:0000107 NCBI chr 3:128,620,320...128,724,716
Ensembl chr 3:108,169,980...108,269,822 		JBrowse link
G Xrcc1 X-ray repair cross complementing 1 involved_in ISO
IEA		 (PMID:14690602)
GO_REF:0000002
GO_REF:0000107		 RGD
InterPro
Ensembl		 PMID:14690602 GO_REF:0000002 GO_REF:0000107 NCBI chr 1:89,268,721...89,296,619
Ensembl chr 1:80,141,207...80,168,701 		JBrowse link
G Xrcc4 X-ray repair cross complementing 4 involved_in
acts_upstream_of_or_within		 IBA
IEA
ISO		 GO_REF:0000033
GO_REF:0000107
GO_REF:0000117
UniProtKB:P49917 (PMID:12517771), (PMID:15385968), (PMID:17290226), (PMID:25597996), (PMID:25742519), (PMID:25934149), (PMID:26774286), (PMID:27437582), (PMID:28453785), (PMID:28500754), (PMID:9809069)
(PMID:14690602)
MGI:1926771|MGI:3047571|MGI:3641440 (PMID:17713479)		 GO_Central
Ensembl
UniProt
RGD		 PMID:9809069 PMID:12517771 PMID:14690602 PMID:15385968 PMID:17290226 More... GO_REF:0000033 GO_REF:0000107 GO_REF:0000117 NCBI chr 2:22,686,506...22,932,929
Ensembl chr 2:20,951,200...21,197,808 		JBrowse link
G Xrcc5 X-ray repair cross complementing 5 involved_in ISO
IEA
IBA		 (PMID:20383123), (PMID:26359349)
GO_REF:0000002
GO_REF:0000033		 RGD
InterPro
GO_Central		 PMID:20383123 PMID:26359349 GO_REF:0000002 GO_REF:0000033 NCBI chr 9:81,404,507...81,493,293
Ensembl chr 9:73,955,216...74,044,018 		JBrowse link
G Xrcc6 X-ray repair cross complementing 6 involved_in
acts_upstream_of_or_within		 ISO
IEA
IBA		 (PMID:20383123), (PMID:26359349)
GO_REF:0000107
GO_REF:0000002
MGI:2179954 (PMID:11751629)
GO_REF:0000033		 RGD
Ensembl
InterPro
GO_Central		 PMID:11751629 PMID:20383123 PMID:26359349 GO_REF:0000002 GO_REF:0000033 GO_REF:0000107 NCBI chr 7:115,423,026...115,443,884
Ensembl chr 7:113,543,057...113,563,762 		JBrowse link
double-strand break repair via single-strand annealing term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Rad52 RAD52 homolog, DNA repair protein involved_in IBA
IEA		 GO_REF:0000033
GO_REF:0000002		 GO_Central
InterPro		 GO_REF:0000002 GO_REF:0000033 NCBI chr 4:154,778,320...154,802,002
Ensembl chr 4:153,106,062...153,128,207 		JBrowse link
double-strand break repair via synthesis-dependent strand annealing term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Fancm FA complementation group M involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr 6:88,862,898...88,916,701
Ensembl chr 6:83,127,093...83,180,028 		JBrowse link
G Helq helicase, POLQ-like involved_in ISO
IEA		 (PMID:34937945)
GO_REF:0000107		 RGD
Ensembl		 PMID:34937945 GO_REF:0000107 NCBI chr14:9,122,978...9,167,310
Ensembl chr14:8,818,592...8,862,960 		JBrowse link
G Xrcc3 X-ray repair cross complementing 3 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr 6:136,684,558...136,694,822
Ensembl chr 6:130,863,959...130,872,444 		JBrowse link
error-free postreplication DNA repair term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ube2v1 ubiquitin conjugating enzyme E2 V1 acts_upstream_of_or_within ISO SGD:S000003055 (PMID:11406273) RGD PMID:11406273 NCBI chr 3:176,736,325...176,759,174
Ensembl chr 3:156,316,781...156,340,273 		JBrowse link
G Ube2v2 ubiquitin conjugating enzyme E2 V2 acts_upstream_of_or_within ISO SGD:S000003055 (PMID:11406273) RGD PMID:11406273 NCBI chr11:98,808,681...98,842,583
Ensembl chr11:85,304,526...85,336,369 		JBrowse link
error-free translesion synthesis term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Pold1 DNA polymerase delta 1, catalytic subunit involved_in ISO
IEA
ISS		 (PMID:24191025)
GO_REF:0000107
GO_REF:0000024		 RGD
Ensembl
UniProt		 PMID:24191025 GO_REF:0000024 GO_REF:0000107 NCBI chr 1:104,161,984...104,178,074
Ensembl chr 1:95,025,499...95,036,465 		JBrowse link
G Poldip2 DNA polymerase delta interacting protein 2 involved_in ISO
IEA
IBA		 (PMID:24191025)
GO_REF:0000107
GO_REF:0000033		 RGD
Ensembl
GO_Central		 PMID:24191025 GO_REF:0000033 GO_REF:0000107 NCBI chr10:63,905,287...63,915,655
Ensembl chr10:63,407,213...63,417,605 		JBrowse link
G Rev1 REV1, DNA directed polymerase involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr 9:40,278,100...40,351,764
Ensembl chr 9:40,278,101...40,351,576 		JBrowse link
error-prone translesion synthesis term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Mad2l2 mitotic arrest deficient 2 like 2 involved_in ISO (PMID:24449906) RGD PMID:24449906 NCBI chr 5:163,846,678...163,859,851
Ensembl chr 5:158,563,567...158,576,693 		JBrowse link
G Pold2 DNA polymerase delta 2, accessory subunit involved_in ISO
IEA		 (PMID:24449906)
GO_REF:0000107		 RGD
Ensembl		 PMID:24449906 GO_REF:0000107 NCBI chr14:84,962,933...84,969,148
Ensembl chr14:80,748,974...80,755,160 		JBrowse link
G Pold3 DNA polymerase delta 3, accessory subunit involved_in ISO (PMID:24449906) RGD PMID:24449906 NCBI chr 1:163,830,217...163,870,015
Ensembl chr 1:154,418,084...154,456,665 		JBrowse link
G Pole2 DNA polymerase epsilon 2, accessory subunit involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr 6:93,410,713...93,448,782
Ensembl chr 6:87,674,702...87,699,305 		JBrowse link
G Polh DNA polymerase eta involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr 9:22,275,929...22,310,576
Ensembl chr 9:14,777,888...14,812,723 		JBrowse link
G Polk DNA polymerase kappa involved_in ISO
IEA
IBA		 (PMID:28297716)
GO_REF:0000107
GO_REF:0000033		 RGD
Ensembl
GO_Central		 PMID:28297716 GO_REF:0000033 GO_REF:0000107 NCBI chr 2:29,556,831...29,616,960
Ensembl chr 2:27,822,679...27,882,313 		JBrowse link
G Polq DNA polymerase theta involved_in ISO
IEA		 (PMID:30655289)
GO_REF:0000107		 RGD
Ensembl		 PMID:30655289 GO_REF:0000107 NCBI chr11:77,179,190...77,281,270
Ensembl chr11:63,673,816...63,775,878 		JBrowse link
G Primpol primase and DNA directed polymerase involved_in ISO
IEA		 (PMID:24682820), (PMID:25746449), (PMID:28534480)
GO_REF:0000002		 RGD
InterPro		 PMID:24682820 PMID:25746449 PMID:28534480 GO_REF:0000002 NCBI chr16:45,681,252...45,715,758
Ensembl chr16:45,681,326...45,715,565 		JBrowse link
G Rev1 REV1, DNA directed polymerase involved_in
acts_upstream_of_or_within		 IBA
IEA
ISO		 GO_REF:0000033
GO_REF:0000107
GO_REF:0000002
(PMID:11711549)		 GO_Central
Ensembl
InterPro
RGD		 PMID:11711549 GO_REF:0000002 GO_REF:0000033 GO_REF:0000107 NCBI chr 9:40,278,100...40,351,764
Ensembl chr 9:40,278,101...40,351,576 		JBrowse link
G Rev3l REV3 like, DNA directed polymerase zeta catalytic subunit involved_in ISO
IEA
IBA		 (PMID:24449906)
GO_REF:0000107
GO_REF:0000033		 RGD
Ensembl
GO_Central		 PMID:24449906 GO_REF:0000033 GO_REF:0000107 NCBI chr20:44,686,482...44,844,668
Ensembl chr20:43,132,363...43,290,099 		JBrowse link
interstrand cross-link repair term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Cenps centromere protein S involved_in ISO (PMID:20347429) RGD PMID:20347429 NCBI chr 5:164,847,009...164,856,705 JBrowse link
G Cenpx centromere protein X involved_in ISO (PMID:20347429) RGD PMID:20347429 NCBI chr10:106,489,796...106,492,637 JBrowse link
G Dclre1a DNA cross-link repair 1A involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr 1:255,569,911...255,589,815
Ensembl chr 1:255,569,919...255,589,678 		JBrowse link
G Dclre1b DNA cross-link repair 1B involved_in IEA
IBA
ISO		 GO_REF:0000107
GO_REF:0000033
(PMID:20479256)		 Ensembl
GO_Central
RGD		 PMID:20479256 GO_REF:0000033 GO_REF:0000107 NCBI chr 2:191,309,909...191,318,399
Ensembl chr 2:191,309,913...191,318,423 		JBrowse link
G Dclre1c DNA cross-link repair 1C involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr17:79,684,988...79,718,399
Ensembl chr17:74,776,935...74,809,186 		JBrowse link
G Ercc1 ERCC excision repair 1, endonuclease non-catalytic subunit acts_upstream_of_or_within ISO (PMID:23637614) RGD PMID:23637614 NCBI chr 1:88,099,308...88,135,966
Ensembl chr 1:78,996,390...79,007,963 		JBrowse link
G Ercc6l2 ERCC excision repair 6 like 2 involved_in ISO
IBA		 (PMID:24507776)
GO_REF:0000033		 RGD
GO_Central		 PMID:24507776 GO_REF:0000033 NCBI chr17:1,076,486...1,311,281
Ensembl chr17:1,216,428...1,310,275 		JBrowse link
G Exo5 exonuclease 5 involved_in ISO
IEA
IBA		 (PMID:23095756)
GO_REF:0000107
GO_REF:0000033		 RGD
Ensembl
GO_Central		 PMID:23095756 GO_REF:0000033 GO_REF:0000107 NCBI chr 5:134,494,440...134,497,757
Ensembl chr 5:134,493,829...134,497,772 		JBrowse link
G Faap100 FA core complex associated protein 100 involved_in IEA GO_REF:0000002 InterPro GO_REF:0000002 NCBI chr10:105,641,677...105,653,809
Ensembl chr10:105,639,414...105,653,494 		JBrowse link
G Faap20 FA core complex associated protein 20 involved_in ISO
ISS		 (PMID:22266823), (PMID:22396592), (PMID:22705371)
GO_REF:0000024		 RGD
UniProt		 PMID:22266823 PMID:22396592 PMID:22705371 GO_REF:0000024 NCBI chr 5:171,083,328...171,097,599
Ensembl chr 5:165,808,657...165,815,333 		JBrowse link
G Faap24 FA core complex associated protein 24 involved_in ISO
IEA		 (PMID:20347429)
GO_REF:0000107
GO_REF:0000002		 RGD
Ensembl
InterPro		 PMID:20347429 GO_REF:0000002 GO_REF:0000107 NCBI chr 1:97,188,678...97,194,899
Ensembl chr 1:88,051,911...88,057,989 		JBrowse link
G Fan1 FANCD2 and FANCI associated nuclease 1 involved_in ISO
IEA
IBA		 (PMID:25430771)
GO_REF:0000002
GO_REF:0000033		 RGD
InterPro
GO_Central		 PMID:25430771 GO_REF:0000002 GO_REF:0000033 NCBI chr 1:127,327,098...127,356,807
Ensembl chr 1:117,917,099...117,944,977 		JBrowse link
G Fanca FA complementation group A involved_in IEA GO_REF:0000002 InterPro GO_REF:0000002 NCBI chr19:68,210,562...68,271,080
Ensembl chr19:51,304,021...51,362,527 		JBrowse link
G Fancb FA complementation group B involved_in IEA GO_REF:0000002 InterPro GO_REF:0000002 NCBI chr  X:33,035,387...33,051,993
Ensembl chr  X:29,403,771...29,420,192 		JBrowse link
G Fancc FA complementation group C involved_in IEA GO_REF:0000002 InterPro GO_REF:0000002 NCBI chr17:1,686,374...1,818,672
Ensembl chr17:1,681,324...1,829,376 		JBrowse link
G Fancd2 FA complementation group D2 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr 4:148,234,633...148,299,035
Ensembl chr 4:146,679,179...146,743,412 		JBrowse link
G Fance FA complementation group E involved_in IEA GO_REF:0000002 InterPro GO_REF:0000002 NCBI chr20:6,371,153...6,388,366
Ensembl chr20:6,375,573...6,386,631 		JBrowse link
G Fancf FA complementation group F involved_in IEA GO_REF:0000002 InterPro GO_REF:0000002 NCBI chr 1:101,449,120...101,451,936
Ensembl chr 1:101,450,389...101,451,923 		JBrowse link
G Fancg FA complementation group G involved_in IEA GO_REF:0000002 InterPro GO_REF:0000002 NCBI chr 5:62,027,494...62,037,202
Ensembl chr 5:57,231,685...57,240,029 		JBrowse link
G Fancl FA complementation group L involved_in IEA GO_REF:0000002 InterPro GO_REF:0000002 NCBI chr14:100,249,733...100,317,958
Ensembl chr14:100,248,875...100,314,255 		JBrowse link
G Fancm FA complementation group M involved_in ISO
IEA
IBA		 (PMID:20347429)
GO_REF:0000107
GO_REF:0000033		 RGD
Ensembl
GO_Central		 PMID:20347429 GO_REF:0000033 GO_REF:0000107 NCBI chr 6:88,862,898...88,916,701
Ensembl chr 6:83,127,093...83,180,028 		JBrowse link
G Firrm FIGNL1 interacting regulator of recombination and mitosis involved_in ISO
ISS		 (PMID:37256941)
GO_REF:0000024		 RGD
UniProt		 PMID:37256941 GO_REF:0000024 NCBI chr13:78,835,081...78,879,022
Ensembl chr13:76,301,918...76,345,804 		JBrowse link
G Hmces 5-hydroxymethylcytosine binding, ES cell specific involved_in ISS
IEA
ISO		 GO_REF:0000024
GO_REF:0000107
(PMID:33321094), (PMID:36608669), (PMID:37519246), (PMID:37950866)		 UniProt
Ensembl
RGD		 PMID:33321094 PMID:36608669 PMID:37519246 PMID:37950866 GO_REF:0000024 GO_REF:0000107 NCBI chr 4:121,950,129...121,972,937
Ensembl chr 4:120,366,542...120,415,616 		JBrowse link
G Hrob homologous recombination factor with OB-fold involved_in ISO
IEA
ISS		 (PMID:31467087)
GO_REF:0000107
GO_REF:0000024		 RGD
Ensembl
UniProt		 PMID:31467087 GO_REF:0000024 GO_REF:0000107 NCBI chr10:87,206,017...87,222,483
Ensembl chr10:87,206,049...87,222,483 		JBrowse link
G LOC120093168 nuclear ubiquitous casein and cyclin-dependent kinase substrate 1-like involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr 6:136,594,866...136,595,965
Ensembl chr 6:136,594,855...136,596,600 		JBrowse link
G Nucks1 nuclear casein kinase and cyclin-dependent kinase substrate 1 involved_in ISO
IBA		 (PMID:26323318)
GO_REF:0000033		 RGD
GO_Central		 PMID:26323318 GO_REF:0000033 NCBI chr13:45,897,275...45,926,491
Ensembl chr13:43,345,115...43,370,229 		JBrowse link
G Poln DNA polymerase nu involved_in ISO (PMID:19908865), (PMID:19995904) RGD PMID:19908865 PMID:19995904 NCBI chr14:76,579,983...76,752,460
Ensembl chr14:76,580,546...76,752,463 		JBrowse link
G Rad51 RAD51 recombinase involved_in ISO
IEA		 (PMID:26253028)
GO_REF:0000107		 RGD
Ensembl		 PMID:26253028 GO_REF:0000107 NCBI chr 3:126,554,210...126,578,888
Ensembl chr 3:106,100,381...106,125,035 		JBrowse link
G Rad51ap1 RAD51 associated protein 1 involved_in ISO
IEA
IBA		 (PMID:26323318)
GO_REF:0000107
GO_REF:0000033		 RGD
Ensembl
GO_Central		 PMID:26323318 GO_REF:0000033 GO_REF:0000107 NCBI chr 4:161,445,610...161,458,661
Ensembl chr 4:159,759,459...159,772,524 		JBrowse link
G Rad51d RAD51 paralog D acts_upstream_of_or_within ISO MGI:2386281 (PMID:15781618) RGD PMID:15781618 NCBI chr10:68,303,350...68,322,002
Ensembl chr10:67,740,712...67,824,434 		JBrowse link
G RFFL ring finger and FYVE like domain containing E3 ubiquitin protein ligase involved_in
acts_upstream_of_or_within		 IEA
ISO		 MGI:2386281 (PMID:15781618) Ensembl
RGD		 PMID:15781618 GO_REF:0000107
G Rfwd3 ring finger and WD repeat domain 3 involved_in ISO
IEA		 (PMID:28575657), (PMID:28575658), (PMID:33321094)
GO_REF:0000002		 RGD
InterPro		 PMID:28575657 PMID:28575658 PMID:33321094 GO_REF:0000002 NCBI chr19:56,145,221...56,177,871
Ensembl chr19:39,236,787...39,268,479 		JBrowse link
G Sprtn SprT-like N-terminal domain involved_in ISO
IEA		 (PMID:36608669)
GO_REF:0000107		 RGD
Ensembl		 PMID:36608669 GO_REF:0000107 NCBI chr19:52,857,612...52,864,864
Ensembl chr19:52,857,866...52,864,864 		JBrowse link
G Vcp valosin-containing protein involved_in ISS GO_REF:0000024 UniProt GO_REF:0000024 NCBI chr 5:62,005,984...62,025,387
Ensembl chr 5:57,210,168...57,229,571 		JBrowse link
G Xrcc3 X-ray repair cross complementing 3 involved_in ISO
IEA		 (PMID:26323318)
GO_REF:0000107		 RGD
Ensembl		 PMID:26323318 GO_REF:0000107 NCBI chr 6:136,684,558...136,694,822
Ensembl chr 6:130,863,959...130,872,444 		JBrowse link
late meiotic recombination nodule assembly term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Mcmdc2 minichromosome maintenance domain containing 2 acts_upstream_of_or_within ISO MGI:2178050|MGI:5511194 (PMID:27760146) RGD PMID:27760146 NCBI chr 5:14,071,609...14,120,435
Ensembl chr 5:9,298,101...9,338,300 		JBrowse link
meiotic DNA double-strand break processing term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Spo11 SPO11 initiator of meiotic double strand breaks involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr 3:182,173,615...182,189,273
Ensembl chr 3:161,757,519...161,770,925 		JBrowse link
meiotic DNA double-strand break processing involved in reciprocal meiotic recombination term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Brip1 BRCA1 interacting DNA helicase 1 acts_upstream_of_or_within ISO MGI:4129733 (PMID:26490168) RGD PMID:26490168 NCBI chr10:71,402,035...71,528,083
Ensembl chr10:70,907,371...71,030,324 		JBrowse link
G Six6os1 Six6 opposite strand transcript 1 involved_in IBA
ISO		 GO_REF:0000033
(PMID:27796301)		 GO_Central
RGD		 PMID:27796301 GO_REF:0000033 NCBI chr 6:97,314,829...97,351,069
Ensembl chr 6:91,579,325...91,615,148 		JBrowse link
meiotic DNA recombinase assembly term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Rad51c RAD51 paralog C involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr10:72,702,299...72,728,980
Ensembl chr10:72,205,032...72,231,248 		JBrowse link
meiotic DNA repair synthesis term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Spata22 spermatogenesis associated 22 acts_upstream_of_or_within
involved_in		 ISO
IEA		 MGI:5314540 (PMID:22011390)
GO_REF:0000002
GO_REF:0000107		 RGD
InterPro
Ensembl		 PMID:22011390 GO_REF:0000002 GO_REF:0000107 NCBI chr10:58,443,736...58,461,578
Ensembl chr10:57,932,187...57,963,081 		JBrowse link
G Sycp1 synaptonemal complex protein 1 involved_in
acts_upstream_of_or_within		 IBA
ISO		 GO_REF:0000033
MGI:109542|MGI:3580000 (PMID:22164254)		 GO_Central
RGD		 PMID:22164254 GO_REF:0000033 NCBI chr 2:192,985,164...193,145,234
Ensembl chr 2:190,296,954...190,456,737 		JBrowse link
G Sycp3 synaptonemal complex protein 3 acts_upstream_of_or_within ISO MGI:105931|MGI:1913904 (PMID:22164254) RGD PMID:22164254 NCBI chr 7:24,761,476...24,775,933
Ensembl chr 7:22,874,055...22,888,511 		JBrowse link
G Tex12 testis expressed 12 acts_upstream_of_or_within ISO MGI:109542|MGI:3811722 (PMID:22164254) RGD PMID:22164254 NCBI chr 8:59,804,662...59,809,595
Ensembl chr 8:50,909,052...50,913,217 		JBrowse link
meiotic recombination nodule assembly term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Mcmdc2 minichromosome maintenance domain containing 2 acts_upstream_of_or_within ISO MGI:2178050|MGI:5511194 (PMID:27760146) RGD PMID:27760146 NCBI chr 5:14,071,609...14,120,435
Ensembl chr 5:9,298,101...9,338,300 		JBrowse link
mismatch repair term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Exo1 exonuclease 1 involved_in ISO
IEA
IBA		 UniProtKB:P43246 (PMID:11809771), (PMID:14636568), (PMID:9788596)
GO_REF:0000107
GO_REF:0000033		 RGD
Ensembl
GO_Central		 PMID:9788596 PMID:11809771 PMID:14636568 GO_REF:0000033 GO_REF:0000107 NCBI chr13:90,341,947...90,366,861
Ensembl chr13:87,809,810...87,834,654 		JBrowse link
G Mlh1 mutL homolog 1 involved_in
acts_upstream_of_or_within		 IEA
ISO
IBA		 GO_REF:0000002
GO_REF:0000107
MGI:1857946|MGI:1858054|MGI:1930998 (PMID:10096563), (PMID:10359802), (PMID:10429667), (PMID:10657972), (PMID:10747038), (PMID:10851078), (PMID:11313994), (PMID:16204034), (PMID:16728433), (PMID:8674118), (PMID:9500552), (PMID:9560238)
GO_REF:0000033
UniProtKB:P43246|UniProtKB:P52701 (PMID:23603115)		 InterPro
Ensembl
RGD
GO_Central		 PMID:8674118 PMID:9500552 PMID:9560238 PMID:10096563 PMID:10359802 More... GO_REF:0000002 GO_REF:0000033 GO_REF:0000107 NCBI chr 8:120,074,871...120,112,109
Ensembl chr 8:111,196,468...111,233,617 		JBrowse link
G Mlh3 mutL homolog 3 involved_in
acts_upstream_of_or_within		 IBA
IEA
ISO		 GO_REF:0000033
GO_REF:0000107
GO_REF:0000002
MGI:104288|MGI:2384218 (PMID:16204034)		 GO_Central
Ensembl
InterPro
RGD		 PMID:16204034 GO_REF:0000002 GO_REF:0000033 GO_REF:0000107 NCBI chr 6:110,612,535...110,649,408
Ensembl chr 6:104,881,483...104,917,728 		JBrowse link
G Msh2 mutS homolog 2 involved_in
acts_upstream_of_or_within		 IEA
ISO
IBA		 GO_REF:0000104
(PMID:17715146), (PMID:7923193), (PMID:9677427)
GO_REF:0000107
GO_REF:0000002
MGI:109519|MGI:1857940|MGI:1858055|MGI:2151801|MGI:2389314|MGI:2680817 (PMID:10581038), (PMID:10874005), (PMID:10992298), (PMID:11046134), (PMID:11890935), (PMID:12531017), (PMID:14744764), (PMID:16728433), (PMID:17331550), (PMID:23071719), (PMID:7628020), (PMID:8706033), (PMID:9157971), (PMID:9244348), (PMID:9288110), (PMID:9697842)
GO_REF:0000033
UniProtKB:P40692|UniProtKB:P52701 (PMID:11555625), (PMID:23603115)		 UniProt
RGD
Ensembl
InterPro
GO_Central		 PMID:7628020 PMID:7923193 PMID:8706033 PMID:9157971 PMID:9244348 More... GO_REF:0000002 GO_REF:0000033 GO_REF:0000104 GO_REF:0000107 NCBI chr 6:12,567,368...12,626,534
Ensembl chr 6:6,813,795...6,872,938 		JBrowse link
G Msh3 mutS homolog 3 acts_upstream_of_or_within
involved_in		 ISO MGI:101816|MGI:1343961|MGI:1858056|MGI:88039 (PMID:10706084), (PMID:11691815), (PMID:16728433)
(PMID:17715146), (PMID:8782829), (PMID:9677427)		 RGD PMID:8782829 PMID:9677427 PMID:10706084 PMID:11691815 PMID:16728433 More... NCBI chr 2:25,179,400...25,320,857 JBrowse link
G Msh4 mutS homolog 4 involved_in IEA GO_REF:0000002 InterPro GO_REF:0000002 NCBI chr 2:245,445,118...245,504,493
Ensembl chr 2:242,792,661...242,843,487 		JBrowse link
G Msh5 mutS homolog 5 involved_in IEA GO_REF:0000002 InterPro GO_REF:0000002 NCBI chr20:3,779,180...3,797,996
Ensembl chr20:3,776,942...3,793,336 		JBrowse link
G Msh6 mutS homolog 6 acts_upstream_of_or_within
involved_in		 ISO
IEA
IBA
IMP		 UniProtKB:P40692|UniProtKB:P43246 (PMID:23603115)
(PMID:10871409), (PMID:17715146), (PMID:23622243), (PMID:8782829)
GO_REF:0000107
GO_REF:0000002
GO_REF:0000033
MGI:109519|MGI:1858014|MGI:2151803|MGI:3653701|MGI:88039 (PMID:11691815), (PMID:12370835), (PMID:15324697), (PMID:16728433), (PMID:23071719), (PMID:9390556)		 RGD
Ensembl
InterPro
GO_Central		 PMID:8782829 PMID:9390556 PMID:10871409 PMID:11691815 PMID:12370835 More... GO_REF:0000002 GO_REF:0000033 GO_REF:0000107, RGD:2292505 NCBI chr 6:12,316,190...12,333,505
Ensembl chr 6:6,562,632...6,579,956 		JBrowse link
G Mutyh mutY DNA glycosylase involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr 5:135,510,666...135,522,777
Ensembl chr 5:130,274,122...130,286,146 		JBrowse link
G Pcna proliferating cell nuclear antigen involved_in ISO
IEA
IBA		 (PMID:11005803)
GO_REF:0000107
GO_REF:0000033		 RGD
Ensembl
GO_Central		 PMID:11005803 GO_REF:0000033 GO_REF:0000107 NCBI chr 3:139,951,948...139,955,820
Ensembl chr 3:119,498,810...119,502,995 		JBrowse link
G Pms1 PMS1 homolog 1, mismatch repair system component involved_in
acts_upstream_of_or_within		 IBA
IEA
ISO		 GO_REF:0000033
GO_REF:0000107
GO_REF:0000002
MGI:1857948 (PMID:9500552)		 GO_Central
Ensembl
InterPro
RGD		 PMID:9500552 GO_REF:0000002 GO_REF:0000033 GO_REF:0000107 NCBI chr 9:55,721,393...55,832,225
Ensembl chr 9:48,253,410...48,340,237 		JBrowse link
G Pms2 PMS1 homolog 2, mismatch repair system component involved_in
acts_upstream_of_or_within		 ISO
IEA
IBA		 (PMID:10871409), (PMID:23709753), (PMID:9618520)
GO_REF:0000002
GO_REF:0000107
MGI:1353455|MGI:1857946|MGI:1857947 (PMID:10359802), (PMID:10429667), (PMID:11313994), (PMID:16204034), (PMID:16728433), (PMID:23071719), (PMID:9500552)
GO_REF:0000033		 RGD
InterPro
Ensembl
GO_Central		 PMID:9500552 PMID:9618520 PMID:10359802 PMID:10429667 PMID:10871409 More... GO_REF:0000002 GO_REF:0000033 GO_REF:0000107 NCBI chr12:15,790,478...15,814,790
Ensembl chr12:10,676,764...10,701,066 		JBrowse link
G Rnaseh2a ribonuclease H2, subunit A acts_upstream_of_or_within
involved_in		 ISO
IEA
IBA		 (PMID:23603115)
GO_REF:0000107
GO_REF:0000033		 RGD
Ensembl
GO_Central		 PMID:23603115 GO_REF:0000033 GO_REF:0000107 NCBI chr19:40,091,206...40,100,904
Ensembl chr19:23,186,383...23,196,041 		JBrowse link
G Rpa1 replication protein A1 involved_in ISO
IEA		 (PMID:9430682)
GO_REF:0000107		 RGD
Ensembl		 PMID:9430682 GO_REF:0000107 NCBI chr10:60,647,185...60,698,279
Ensembl chr10:60,148,793...60,199,949 		JBrowse link
G Rpa2 replication protein A2 involved_in ISS
ISO		 GO_REF:0000024
(PMID:9430682)		 UniProt
RGD		 PMID:9430682 GO_REF:0000024 NCBI chr 5:150,260,668...150,271,329
Ensembl chr 5:144,976,748...144,987,350 		JBrowse link
G Rpa3 replication protein A3 involved_in ISO
IBA		 (PMID:9430682)
GO_REF:0000033		 RGD
GO_Central		 PMID:9430682 GO_REF:0000033 NCBI chr 4:37,270,966...37,273,997
Ensembl chr 4:36,304,651...36,307,709 		JBrowse link
G Rpa3l1 replication protein A3 like 1 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr12:45,908,653...45,909,063
Ensembl chr12:45,908,683...45,909,048 		JBrowse link
G Setd2 SET domain containing 2, histone lysine methyltransferase involved_in ISO
IEA		 (PMID:23622243)
GO_REF:0000107		 RGD
Ensembl		 PMID:23622243 GO_REF:0000107 NCBI chr 8:119,390,207...119,475,863
Ensembl chr 8:110,511,772...110,597,489 		JBrowse link
G Thsd8 thrombospondin type 1 domain containing 8 acts_upstream_of_or_within IEA GO_REF:0000107 Ensembl GO_REF:0000107 NCBI chr19:23,186,394...23,188,323
Ensembl chr19:23,186,364...23,196,042 		JBrowse link
G Wrn WRN RecQ like helicase involved_in ISO (PMID:17715146) RGD PMID:17715146 NCBI chr16:65,466,552...65,602,951
Ensembl chr16:58,763,504...58,895,450 		JBrowse link
G Xpc XPC complex subunit, DNA damage recognition and repair factor involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr 4:125,550,833...125,578,084
Ensembl chr 4:123,993,666...124,021,010 		JBrowse link
mismatch repair involved in maintenance of fidelity involved in DNA-dependent DNA replication term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Mcm9 minichromosome maintenance 9 homologous recombination repair factor involved_in ISO
IEA		 (PMID:26300262)
GO_REF:0000107		 RGD
Ensembl		 PMID:26300262 GO_REF:0000107 NCBI chr20:32,818,219...32,929,577
Ensembl chr20:32,844,951...32,929,600 		JBrowse link
mitochondrial DNA repair term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Chchd4 coiled-coil-helix-coiled-coil-helix domain containing 4 acts_upstream_of_or_within ISO (PMID:24101517) RGD PMID:24101517 NCBI chr 4:125,525,428...125,534,562
Ensembl chr 4:123,968,265...123,977,414
Ensembl chr 1:123,968,265...123,977,414 		JBrowse link
G Dna2 DNA replication helicase/nuclease 2 involved_in IEA GO_REF:0000107 Ensembl GO_REF:0000107 NCBI chr20:25,660,339...25,689,285
Ensembl chr20:25,662,055...25,716,319 		JBrowse link
G Lig3 DNA ligase 3 involved_in
acts_upstream_of_or_within		 ISO
IEA		 (PMID:21390132)
GO_REF:0000107
(PMID:24674627)
(PMID:21390131), (PMID:21390132)		 RGD
Ensembl		 PMID:21390131 PMID:21390132 PMID:24674627 GO_REF:0000107 NCBI chr10:68,215,371...68,238,705
Ensembl chr10:67,717,812...67,798,414 		JBrowse link
G Mgme1 mitochondrial genome maintenance exonuclease 1 involved_in IEA GO_REF:0000104 UniProt GO_REF:0000104 NCBI chr 3:152,094,514...152,103,314
Ensembl chr 3:131,640,944...131,649,932 		JBrowse link
G Neurl4 neuralized E3 ubiquitin protein ligase 4 acts_upstream_of_or_within ISO
IEA		 MGI:5296072 (PMID:35157000)
GO_REF:0000107		 RGD
Ensembl		 PMID:35157000 GO_REF:0000107 NCBI chr10:54,624,923...54,637,262
Ensembl chr10:54,625,642...54,637,258 		JBrowse link
G Parp1 poly (ADP-ribose) polymerase 1 acts_upstream_of_or_within ISO
IEA		 (PMID:25378300)
GO_REF:0000107		 RGD
Ensembl		 PMID:25378300 GO_REF:0000107 NCBI chr13:94,839,484...94,871,295
Ensembl chr13:92,307,586...92,339,404 		JBrowse link
G Primpol primase and DNA directed polymerase involved_in ISO (PMID:29073063) RGD PMID:29073063 NCBI chr16:45,681,252...45,715,758
Ensembl chr16:45,681,326...45,715,565 		JBrowse link
G Slc25a16 solute carrier family 25 member 16 involved_in IEA GO_REF:0000107 Ensembl GO_REF:0000107 NCBI chr20:25,659,847...25,717,080
Ensembl chr20:25,662,055...25,716,319 		JBrowse link
G Tp53 tumor protein p53 acts_upstream_of_or_within ISO
IEA		 MGI:3528279 (PMID:24101517)
GO_REF:0000107		 RGD
Ensembl		 PMID:24101517 GO_REF:0000107 NCBI chr10:54,798,871...54,810,300
Ensembl chr10:54,300,048...54,311,524 		JBrowse link
mitochondrial double-strand break repair via homologous recombination term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Mre11 MRE11 homolog, double strand break repair nuclease involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr 8:19,900,211...19,961,906
Ensembl chr 8:11,632,354...11,678,279 		JBrowse link
negative regulation of DNA repair term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Cgas cyclic GMP-AMP synthase involved_in ISO
IEA		 (PMID:35210392)
GO_REF:0000107		 RGD
Ensembl		 PMID:35210392 GO_REF:0000107 NCBI chr 8:88,172,559...88,187,538
Ensembl chr 8:79,294,511...79,305,496 		JBrowse link
G Rps3 ribosomal protein S3 involved_in ISO (PMID:17049931) RGD PMID:17049931 NCBI chr 1:163,190,476...163,195,885
Ensembl chr 1:153,777,472...153,783,680 		JBrowse link
negative regulation of double-strand break repair term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Mir221 microRNA 221 involved_in ISO (PMID:24147153) RGD PMID:24147153 NCBI chr  X:6,023,182...6,023,290
Ensembl chr  X:3,429,465...3,429,573 		JBrowse link
G Otub1 OTU deubiquitinase, ubiquitin aldehyde binding 1 involved_in ISS
ISO		 GO_REF:0000024
(PMID:20725033)		 UniProt
RGD		 PMID:20725033 GO_REF:0000024 NCBI chr 1:213,816,400...213,824,679
Ensembl chr 1:204,387,215...204,395,483 		JBrowse link
G Rnf169 ring finger protein 169 involved_in ISO (PMID:22492721), (PMID:22733822), (PMID:22742833) RGD PMID:22492721 PMID:22733822 PMID:22742833 NCBI chr 1:163,662,582...163,724,154
Ensembl chr 1:154,254,473...154,311,653 		JBrowse link
G Twist1 twist family bHLH transcription factor 1 involved_in ISO (PMID:17690110) RGD PMID:17690110 NCBI chr 6:56,402,309...56,404,303
Ensembl chr 6:50,674,678...50,677,653 		JBrowse link
negative regulation of double-strand break repair via homologous recombination term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Abl1 ABL proto-oncogene 1, non-receptor tyrosine kinase involved_in ISO
IEA		 (PMID:9461559)
GO_REF:0000107		 RGD
Ensembl		 PMID:9461559 GO_REF:0000107 NCBI chr 3:35,377,587...35,480,843
Ensembl chr 3:14,979,853...15,083,065 		JBrowse link
G C1qbp complement C1q binding protein involved_in IEA
ISO
ISS		 GO_REF:0000107
(PMID:31353207)
GO_REF:0000024		 Ensembl
RGD
UniProt		 PMID:31353207 GO_REF:0000024 GO_REF:0000107 NCBI chr10:56,198,534...56,203,185
Ensembl chr10:55,699,954...55,704,649 		JBrowse link
G Cgas cyclic GMP-AMP synthase involved_in ISO
IEA
IBA		 (PMID:30356214), (PMID:31544964)
GO_REF:0000107
GO_REF:0000033		 RGD
Ensembl
GO_Central		 PMID:30356214 PMID:31544964 GO_REF:0000033 GO_REF:0000107 NCBI chr 8:88,172,559...88,187,538
Ensembl chr 8:79,294,511...79,305,496 		JBrowse link
G Csnk2a1 casein kinase 2 alpha 1 involved_in ISS
ISO		 GO_REF:0000024
(PMID:28512243)		 UniProt
RGD		 PMID:28512243 GO_REF:0000024 NCBI chr 3:161,170,295...161,217,073
Ensembl chr 3:140,709,991...140,756,696 		JBrowse link
G Fancb FA complementation group B involved_in
acts_upstream_of_or_within		 IBA
ISO		 GO_REF:0000033
MGI:2156841 (PMID:25520194)		 GO_Central
RGD		 PMID:25520194 GO_REF:0000033 NCBI chr  X:33,035,387...33,051,993
Ensembl chr  X:29,403,771...29,420,192 		JBrowse link
G Fbh1 F-box DNA helicase 1 involved_in ISO (PMID:19736316)
(PMID:24108124)		 RGD PMID:19736316 PMID:24108124 NCBI chr17:71,659,351...71,697,431
Ensembl chr17:66,749,534...66,787,590 		JBrowse link
G Helb DNA helicase B involved_in ISO
IEA		 (PMID:26774285)
GO_REF:0000107		 RGD
Ensembl		 PMID:26774285 GO_REF:0000107 NCBI chr 7:57,474,115...57,502,221
Ensembl chr 7:55,588,798...55,615,585 		JBrowse link
G Kat5 lysine acetyltransferase 5 involved_in ISO
IEA		 (PMID:32832608)
GO_REF:0000107		 RGD
Ensembl		 PMID:32832608 GO_REF:0000107 NCBI chr 1:212,325,089...212,332,640
Ensembl chr 1:202,895,751...202,903,458 		JBrowse link
G Klhl15 kelch-like family member 15 involved_in ISS
IEA
ISO		 GO_REF:0000024
GO_REF:0000107
(PMID:27561354), (PMID:35219381)		 UniProt
Ensembl
RGD		 PMID:27561354 PMID:35219381 GO_REF:0000024 GO_REF:0000107 NCBI chr  X:62,987,762...63,043,980
Ensembl chr  X:58,995,461...59,046,069 		JBrowse link
G Kmt5a lysine methyltransferase 5A involved_in ISO (PMID:27338793) RGD PMID:27338793 NCBI chr12:37,800,339...37,823,706
Ensembl chr12:32,139,178...32,162,711 		JBrowse link
G Mad2l2 mitotic arrest deficient 2 like 2 involved_in ISO (PMID:29656893) RGD PMID:29656893 NCBI chr 5:163,846,678...163,859,851
Ensembl chr 5:158,563,567...158,576,693 		JBrowse link
G Parpbp PARP1 binding protein involved_in ISS
IEA
IBA
ISO		 GO_REF:0000024
GO_REF:0000107
GO_REF:0000033
GO_REF:0000002
(PMID:22153967)		 UniProt
Ensembl
GO_Central
InterPro
RGD		 PMID:22153967 GO_REF:0000002 GO_REF:0000024 GO_REF:0000033 GO_REF:0000107 NCBI chr 7:24,398,897...24,468,330
Ensembl chr 7:22,511,427...22,573,695 		JBrowse link
G Plk1 polo-like kinase 1 involved_in IEA
ISO
ISS		 GO_REF:0000107
(PMID:28512243)
GO_REF:0000024		 Ensembl
RGD
UniProt		 PMID:28512243 GO_REF:0000024 GO_REF:0000107 NCBI chr 1:186,147,658...186,157,637
Ensembl chr 1:176,716,420...176,726,400 		JBrowse link
G Polq DNA polymerase theta involved_in ISO
IEA		 (PMID:25642963), (PMID:28695890), (PMID:36455556)
GO_REF:0000107
(PMID:25642960), (PMID:28687761), (PMID:29058711)		 RGD
Ensembl		 PMID:25642960 PMID:25642963 PMID:28687761 PMID:28695890 PMID:29058711 More... GO_REF:0000107 NCBI chr11:77,179,190...77,281,270
Ensembl chr11:63,673,816...63,775,878 		JBrowse link
G Radx RPA1 related single stranded DNA binding protein, X-linked involved_in ISO
IEA
ISS		 (PMID:28735897)
GO_REF:0000107
GO_REF:0000024		 RGD
Ensembl
UniProt		 PMID:28735897 GO_REF:0000024 GO_REF:0000107 NCBI chr  X:107,877,835...107,965,476
Ensembl chr  X:103,089,284...103,176,838 		JBrowse link
G Recql5 RecQ like helicase 5 acts_upstream_of_or_within ISO MGI:2448558 (PMID:25520194) RGD PMID:25520194 NCBI chr10:101,625,477...101,664,582
Ensembl chr10:101,126,547...101,165,652 		JBrowse link
G Rif1 replication timing regulatory factor 1 involved_in ISO
IEA		 (PMID:23333306)
GO_REF:0000107
(PMID:23306437), (PMID:23333305)		 RGD
Ensembl		 PMID:23306437 PMID:23333305 PMID:23333306 GO_REF:0000107 NCBI chr 3:56,963,840...57,017,106
Ensembl chr 3:36,554,697...36,603,617 		JBrowse link
G Rmi2 RecQ mediated genome instability 2 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr10:5,336,269...5,344,202
Ensembl chr10:4,830,553...4,837,235 		JBrowse link
G Senp3 SUMO specific peptidase 3 involved_in ISO
IEA		 (PMID:32832608)
GO_REF:0000107		 RGD
Ensembl		 PMID:32832608 GO_REF:0000107 NCBI chr10:54,889,445...54,898,359
Ensembl chr10:54,390,694...54,399,593 		JBrowse link
G Shld1 shieldin complex subunit 1 involved_in ISO
IBA		 (PMID:29656893)
GO_REF:0000033		 RGD
GO_Central		 PMID:29656893 GO_REF:0000033 NCBI chr 3:140,391,611...140,462,273
Ensembl chr 3:119,938,833...120,009,550 		JBrowse link
G Shld2 shieldin complex subunit 2 involved_in ISO (PMID:29656893) RGD PMID:29656893 NCBI chr16:9,554,921...9,646,186
Ensembl chr16:9,548,660...9,639,965 		JBrowse link
G Shld3 shieldin complex subunit 3 involved_in ISO
IEA
IBA		 (PMID:29656893)
GO_REF:0000107
GO_REF:0000033		 RGD
Ensembl
GO_Central		 PMID:29656893 GO_REF:0000033 GO_REF:0000107 NCBI chr 2:37,031,045...37,035,859
Ensembl chr 2:35,295,859...35,302,346 		JBrowse link
G Smchd1 structural maintenance of chromosomes flexible hinge domain containing 1 involved_in ISO
IEA		 (PMID:25294876)
GO_REF:0000107		 RGD
Ensembl		 PMID:25294876 GO_REF:0000107 NCBI chr 9:118,690,050...118,837,281
Ensembl chr 9:111,247,702...111,349,665 		JBrowse link
G Tp53bp1 tumor protein p53 binding protein 1 involved_in ISO
IEA		 (PMID:23333306), (PMID:23345425)
GO_REF:0000107
(PMID:20362325), (PMID:23333305)		 RGD
Ensembl		 PMID:20362325 PMID:23333305 PMID:23333306 PMID:23345425 GO_REF:0000107 NCBI chr 3:128,620,320...128,724,716
Ensembl chr 3:108,169,980...108,269,822 		JBrowse link
G Ubqln4 ubiquilin 4 involved_in ISO
IEA		 (PMID:30612738)
GO_REF:0000107		 RGD
Ensembl		 PMID:30612738 GO_REF:0000107 NCBI chr 2:176,310,524...176,325,724
Ensembl chr 2:174,012,777...174,028,059 		JBrowse link
negative regulation of double-strand break repair via nonhomologous end joining term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Aunip aurora kinase A and ninein interacting protein involved_in ISS
IEA
ISO		 GO_REF:0000024
GO_REF:0000107
(PMID:29042561)		 UniProt
Ensembl
RGD		 PMID:29042561 GO_REF:0000024 GO_REF:0000107 NCBI chr 5:152,006,021...152,018,614
Ensembl chr 5:146,722,337...146,736,501 		JBrowse link
G Cyren cell cycle regulator of NHEJ involved_in ISO
IEA
ISS		 (PMID:28959974)
GO_REF:0000002
GO_REF:0000107
GO_REF:0000024		 RGD
InterPro
Ensembl
UniProt		 PMID:28959974 GO_REF:0000002 GO_REF:0000024 GO_REF:0000107 NCBI chr 4:64,514,477...64,519,896
Ensembl chr 4:63,547,335...63,551,602 		JBrowse link
G Ercc6 ERCC excision repair 6, chromatin remodeling factor involved_in ISO
IEA		 (PMID:25820262)
GO_REF:0000107		 RGD
Ensembl		 PMID:25820262 GO_REF:0000107 NCBI chr16:7,771,311...7,841,895
Ensembl chr16:7,765,013...7,835,587 		JBrowse link
G Hmga2 high mobility group AT-hook 2 involved_in ISS
IEA
ISO		 GO_REF:0000024
GO_REF:0000107
(PMID:19549901)		 UniProt
Ensembl
RGD		 PMID:19549901 GO_REF:0000024 GO_REF:0000107 NCBI chr 7:57,762,710...57,884,555
Ensembl chr 7:55,880,112...55,994,784 		JBrowse link
G Hsf1 heat shock transcription factor 1 involved_in ISO
IEA		 (PMID:26359349)
GO_REF:0000107		 RGD
Ensembl		 PMID:26359349 GO_REF:0000107 NCBI chr 7:110,076,710...110,103,665
Ensembl chr 7:108,196,056...108,223,011 		JBrowse link
G Mre11 MRE11 homolog, double strand break repair nuclease involved_in ISS
ISO		 GO_REF:0000024
(PMID:24316220)		 UniProt
RGD		 PMID:24316220 GO_REF:0000024 NCBI chr 8:19,900,211...19,961,906
Ensembl chr 8:11,632,354...11,678,279 		JBrowse link
G Nudt16l1 nudix hydrolase 16 like 1 involved_in ISO
IEA		 (PMID:28241136)
GO_REF:0000107		 RGD
Ensembl		 PMID:28241136 GO_REF:0000107 NCBI chr10:11,142,626...11,144,542
Ensembl chr10:10,636,174...10,688,370 		JBrowse link
negative regulation of double-strand break repair via single-strand annealing term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ogg1 8-oxoguanine DNA glycosylase acts_upstream_of_or_within ISO (PMID:19506022) RGD PMID:19506022 NCBI chr 4:148,030,237...148,037,599
Ensembl chr 4:146,474,750...146,484,766 		JBrowse link
nucleotide-excision repair term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Brca2 BRCA2, DNA repair associated involved_in ISO (PMID:16845393) RGD PMID:16845393 NCBI chr12:4,895,092...4,939,340
Ensembl chr12:59,819...100,567 		JBrowse link
G Brip1 BRCA1 interacting DNA helicase 1 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr10:71,402,035...71,528,083
Ensembl chr10:70,907,371...71,030,324 		JBrowse link
G Cetn2 centrin 2 involved_in ISO
IBA		 (PMID:15964821)
GO_REF:0000033		 RGD
GO_Central		 PMID:15964821 GO_REF:0000033 NCBI chr  X:155,812,212...155,817,186
Ensembl chr  X:150,769,953...150,774,919 		JBrowse link
G Commd1 copper metabolism domain containing 1 involved_in ISO
IEA		 (PMID:23144634)
GO_REF:0000107		 RGD
Ensembl		 PMID:23144634 GO_REF:0000107 NCBI chr14:101,081,667...101,185,738
Ensembl chr14:96,880,463...96,984,501 		JBrowse link
G Dclre1a DNA cross-link repair 1A acts_upstream_of_or_within ISO MGI:2180947 (PMID:10848582) RGD PMID:10848582 NCBI chr 1:255,569,911...255,589,815
Ensembl chr 1:255,569,919...255,589,678 		JBrowse link
G Ddb2 damage specific DNA binding protein 2 involved_in ISO
IEA		 (PMID:19109893)
GO_REF:0000107		 RGD
Ensembl		 PMID:19109893 GO_REF:0000107 NCBI chr 3:77,185,114...77,207,650
Ensembl chr 3:77,185,109...77,207,631 		JBrowse link
G Ercc1 ERCC excision repair 1, endonuclease non-catalytic subunit involved_in
acts_upstream_of_or_within		 ISO (PMID:7657672)
MGI:2183944 (PMID:8275084)
(PMID:3290851)
(PMID:22547097)		 RGD PMID:3290851 PMID:7657672 PMID:8275084 PMID:22547097 NCBI chr 1:88,099,308...88,135,966
Ensembl chr 1:78,996,390...79,007,963 		JBrowse link
G Ercc2 ERCC excision repair 2, TFIIH core complex helicase subunit involved_in
acts_upstream_of_or_within		 ISO
IEA		 (PMID:8692841)
GO_REF:0000107
GO_REF:0000002
MGI:2183949 (PMID:11950998), (PMID:9651581)		 RGD
Ensembl
InterPro		 PMID:8692841 PMID:9651581 PMID:11950998 GO_REF:0000002 GO_REF:0000107 NCBI chr 1:88,161,342...88,175,102
Ensembl chr 1:79,033,326...79,047,102 		JBrowse link
G Ercc3 ERCC excision repair 3, TFIIH core complex helicase subunit involved_in ISO
IEA		 (PMID:17466626), (PMID:17509950), (PMID:8692841)
GO_REF:0000002		 RGD
InterPro		 PMID:8692841 PMID:17466626 PMID:17509950 GO_REF:0000002 NCBI chr18:23,883,613...23,914,326
Ensembl chr18:23,883,580...23,914,329 		JBrowse link
G Ercc4 ERCC excision repair 4, endonuclease catalytic subunit acts_upstream_of_or_within
involved_in		 ISO (PMID:10644440)
(PMID:10413517), (PMID:11790111), (PMID:14728600), (PMID:22547097), (PMID:32034146), (PMID:8797827)		 RGD PMID:8797827 PMID:10413517 PMID:10644440 PMID:11790111 PMID:14728600 More... NCBI chr10:2,926,085...2,958,176
Ensembl chr10:2,419,038...2,448,369
Ensembl chr10:2,419,038...2,448,369 		JBrowse link
G Ercc5 ERCC excision repair 5, endonuclease involved_in
acts_upstream_of_or_within		 ISO
IEA		 (PMID:11259578), (PMID:32522879), (PMID:32821917), (PMID:7657672), (PMID:8090225)
GO_REF:0000002
MGI:2182793 (PMID:10022922)		 RGD
InterPro		 PMID:7657672 PMID:8090225 PMID:10022922 PMID:11259578 PMID:32522879 More... GO_REF:0000002 NCBI chr 9:46,309,477...46,354,478
Ensembl chr 9:46,309,389...46,354,472 		JBrowse link
G Fan1 FANCD2 and FANCI associated nuclease 1 involved_in ISO (PMID:20603015), (PMID:20603016), (PMID:25430771) RGD PMID:20603015 PMID:20603016 PMID:25430771 NCBI chr 1:127,327,098...127,356,807
Ensembl chr 1:117,917,099...117,944,977 		JBrowse link
G Fancc FA complementation group C involved_in
acts_upstream_of_or_within		 IBA
ISO		 GO_REF:0000033
MGI:1858041 (PMID:8704201)		 GO_Central
RGD		 PMID:8704201 GO_REF:0000033 NCBI chr17:1,686,374...1,818,672
Ensembl chr17:1,681,324...1,829,376 		JBrowse link
G Gtf2h1 general transcription factor IIH subunit 1 involved_in IEA GO_REF:0000002 InterPro GO_REF:0000002 NCBI chr 1:97,321,417...97,349,455
Ensembl chr 1:97,321,394...97,349,455 		JBrowse link
G Gtf2h2 general transcription factor IIH subunit 2 involved_in IEA
IBA		 GO_REF:0000104
GO_REF:0000002
GO_REF:0000033		 UniProt
InterPro
GO_Central		 GO_REF:0000002 GO_REF:0000033 GO_REF:0000104 NCBI chr 2:33,358,863...33,386,726
Ensembl chr 2:31,624,678...31,652,592 		JBrowse link
G Gtf2h3 general transcription factor IIH subunit 3 involved_in IEA
IBA		 GO_REF:0000104
GO_REF:0000002
GO_REF:0000033		 UniProt
InterPro
GO_Central		 GO_REF:0000002 GO_REF:0000033 GO_REF:0000104 NCBI chr12:37,669,995...37,687,505
Ensembl chr12:32,009,014...32,025,497 		JBrowse link
G Gtf2h5 general transcription factor IIH subunit 5 acts_upstream_of_or_within
involved_in		 ISO
IEA		 (PMID:23637614)
GO_REF:0000002
MGI:5514340 (PMID:23637614)		 RGD
InterPro		 PMID:23637614 GO_REF:0000002 NCBI chr 1:46,656,804...46,663,512
Ensembl chr 1:46,656,859...46,664,939 		JBrowse link
G Hus1 HUS1 checkpoint clamp component involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr14:83,688,702...83,703,466
Ensembl chr14:83,688,708...83,703,442 		JBrowse link
G Kat5 lysine acetyltransferase 5 involved_in ISS
IEA
ISO		 GO_REF:0000024
GO_REF:0000107
(PMID:32034146)		 UniProt
Ensembl
RGD		 PMID:32034146 GO_REF:0000024 GO_REF:0000107 NCBI chr 1:212,325,089...212,332,640
Ensembl chr 1:202,895,751...202,903,458 		JBrowse link
G LOC120103497 general transcription factor IIH subunit 5-like involved_in IEA GO_REF:0000002 InterPro GO_REF:0000002 NCBI chr 6:27,109,209...27,114,478
Ensembl chr 6:27,111,331...27,111,546 		JBrowse link
G Mnat1 MNAT1 component of CDK activating kinase involved_in IEA GO_REF:0000002 InterPro GO_REF:0000002 NCBI chr 6:91,814,703...91,971,945
Ensembl chr 6:91,814,749...91,970,744 		JBrowse link
G Nthl1 nth-like DNA glycosylase 1 involved_in ISO
IEA
IBA		 (PMID:8990169)
GO_REF:0000107
(PMID:9743625)
GO_REF:0000033		 RGD
Ensembl
GO_Central		 PMID:8990169 PMID:9743625 GO_REF:0000033 GO_REF:0000107 NCBI chr10:14,160,334...14,166,502
Ensembl chr10:13,655,785...13,661,957 		JBrowse link
G Ogg1 8-oxoguanine DNA glycosylase acts_upstream_of_or_within
involved_in		 ISO
IEA		 (PMID:19506022)
GO_REF:0000002		 RGD
InterPro		 PMID:19506022 GO_REF:0000002 NCBI chr 4:148,030,237...148,037,599
Ensembl chr 4:146,474,750...146,484,766 		JBrowse link
G Pola1 DNA polymerase alpha 1, catalytic subunit NOT|involved_in ISO (PMID:1508673) RGD PMID:1508673 NCBI chr  X:62,028,475...62,342,455
Ensembl chr  X:58,034,619...58,348,536 		JBrowse link
G Poll DNA polymerase lambda involved_in ISO
IEA		 (PMID:10982892)
GO_REF:0000107		 RGD
Ensembl		 PMID:10982892 GO_REF:0000107 NCBI chr 1:254,349,229...254,357,689
Ensembl chr 1:244,400,204...244,408,662 		JBrowse link
G Rad23a RAD23 homolog A, nucleotide excision repair protein involved_in ISO
IEA		 (PMID:9372924)
GO_REF:0000107
GO_REF:0000002
GO_REF:0000104		 RGD
Ensembl
InterPro
UniProt		 PMID:9372924 GO_REF:0000002 GO_REF:0000104 GO_REF:0000107 NCBI chr19:40,219,235...40,225,543
Ensembl chr19:23,314,797...23,320,695 		JBrowse link
G Rad23b RAD23 homolog B, nucleotide excision repair protein involved_in ISO
IEA		 (PMID:19941824), (PMID:8168482), (PMID:9734359)
GO_REF:0000107
GO_REF:0000002
GO_REF:0000104		 RGD
Ensembl
InterPro
UniProt		 PMID:8168482 PMID:9734359 PMID:19941824 GO_REF:0000002 GO_REF:0000104 GO_REF:0000107 NCBI chr 5:74,885,518...74,923,621
Ensembl chr 5:70,090,232...70,128,319 		JBrowse link
G Rpa1 replication protein A1 involved_in ISO
IEA
IBA		 (PMID:9430682)
GO_REF:0000107
GO_REF:0000033		 RGD
Ensembl
GO_Central		 PMID:9430682 GO_REF:0000033 GO_REF:0000107 NCBI chr10:60,647,185...60,698,279
Ensembl chr10:60,148,793...60,199,949 		JBrowse link
G Rpa2 replication protein A2 involved_in ISO
IBA
ISS		 (PMID:9430682)
GO_REF:0000033
GO_REF:0000024		 RGD
GO_Central
UniProt		 PMID:9430682 GO_REF:0000024 GO_REF:0000033 NCBI chr 5:150,260,668...150,271,329
Ensembl chr 5:144,976,748...144,987,350 		JBrowse link
G Rpa3 replication protein A3 involved_in ISO
IBA		 (PMID:9430682)
GO_REF:0000033		 RGD
GO_Central		 PMID:9430682 GO_REF:0000033 NCBI chr 4:37,270,966...37,273,997
Ensembl chr 4:36,304,651...36,307,709 		JBrowse link
G Rpa3l1 replication protein A3 like 1 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr12:45,908,653...45,909,063
Ensembl chr12:45,908,683...45,909,048 		JBrowse link
G Slx4 SLX4 structure-specific endonuclease subunit involved_in ISO
IEA		 (PMID:19596236)
GO_REF:0000107		 RGD
Ensembl		 PMID:19596236 GO_REF:0000107 NCBI chr10:12,032,131...12,055,685
Ensembl chr10:11,528,424...11,549,295 		JBrowse link
G Tp53 tumor protein p53 involved_in ISO
IEA
ISS		 (PMID:7663514)
GO_REF:0000107
GO_REF:0000024		 RGD
Ensembl
UniProt		 PMID:7663514 GO_REF:0000024 GO_REF:0000107 NCBI chr10:54,798,871...54,810,300
Ensembl chr10:54,300,048...54,311,524 		JBrowse link
G Xpa XPA, DNA damage recognition and repair factor involved_in
acts_upstream_of_or_within		 ISO
IEA		 (PMID:21148310)
GO_REF:0000002
MGI:1857939 (PMID:11950998), (PMID:12509265)		 RGD
InterPro		 PMID:11950998 PMID:12509265 PMID:21148310 GO_REF:0000002 NCBI chr 5:65,227,281...65,275,784
Ensembl chr 5:60,431,673...60,475,726 		JBrowse link
G Xpc XPC complex subunit, DNA damage recognition and repair factor involved_in
acts_upstream_of_or_within		 ISO
IEA
IBA		 (PMID:11259578), (PMID:19941824), (PMID:8168482), (PMID:9734359)
GO_REF:0000002
GO_REF:0000107
(PMID:22431748)
MGI:1859840|MGI:1931883 (PMID:12815074), (PMID:17049932), (PMID:19615386), (PMID:9067411)
GO_REF:0000033		 RGD
InterPro
Ensembl
GO_Central		 PMID:8168482 PMID:9067411 PMID:9734359 PMID:11259578 PMID:12815074 More... GO_REF:0000002 GO_REF:0000033 GO_REF:0000107 NCBI chr 4:125,550,833...125,578,084
Ensembl chr 4:123,993,666...124,021,010 		JBrowse link
nucleotide-excision repair involved in interstrand cross-link repair term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ercc4 ERCC excision repair 4, endonuclease catalytic subunit involved_in ISO
IBA		 (PMID:32034146)
GO_REF:0000033		 RGD
GO_Central		 PMID:32034146 GO_REF:0000033 NCBI chr10:2,926,085...2,958,176
Ensembl chr10:2,419,038...2,448,369
Ensembl chr10:2,419,038...2,448,369 		JBrowse link
G Ercc4l1 excision repair cross-complementing rodent repair deficiency, complementation group 4-like 1 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr10:1,462,146...1,500,409
Ensembl chr10:954,977...983,174 		JBrowse link
G Xpa XPA, DNA damage recognition and repair factor involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr 5:65,227,281...65,275,784
Ensembl chr 5:60,431,673...60,475,726 		JBrowse link
nucleotide-excision repair, DNA damage recognition term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Xpa XPA, DNA damage recognition and repair factor involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr 5:65,227,281...65,275,784
Ensembl chr 5:60,431,673...60,475,726 		JBrowse link
nucleotide-excision repair, DNA gap filling term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Lig4 DNA ligase 4 involved_in ISO
IBA		 (PMID:12517771), (PMID:17290226)
GO_REF:0000033		 RGD
GO_Central		 PMID:12517771 PMID:17290226 GO_REF:0000033 NCBI chr16:86,220,345...86,228,930
Ensembl chr16:79,518,312...79,527,040 		JBrowse link
G Polb DNA polymerase beta NOT|involved_in ISO (PMID:20227374) RGD PMID:20227374 NCBI chr16:76,081,903...76,105,174
Ensembl chr16:69,379,400...69,404,812 		JBrowse link
G Pold1 DNA polymerase delta 1, catalytic subunit involved_in ISO
IBA
IEA		 (PMID:20227374)
GO_REF:0000033
GO_REF:0000107		 RGD
GO_Central
Ensembl		 PMID:20227374 GO_REF:0000033 GO_REF:0000107 NCBI chr 1:104,161,984...104,178,074
Ensembl chr 1:95,025,499...95,036,465 		JBrowse link
G Pold3 DNA polymerase delta 3, accessory subunit involved_in ISO
IBA		 (PMID:20227374)
GO_REF:0000033		 RGD
GO_Central		 PMID:20227374 GO_REF:0000033 NCBI chr 1:163,830,217...163,870,015
Ensembl chr 1:154,418,084...154,456,665 		JBrowse link
G Pole DNA polymerase epsilon, catalytic subunit involved_in ISO
IEA
IBA		 (PMID:20227374)
GO_REF:0000107
GO_REF:0000033		 RGD
Ensembl
GO_Central		 PMID:20227374 GO_REF:0000033 GO_REF:0000107 NCBI chr12:52,005,155...52,053,761
Ensembl chr12:46,345,420...46,393,939 		JBrowse link
G Polk DNA polymerase kappa involved_in ISO
IEA		 (PMID:20227374)
GO_REF:0000107		 RGD
Ensembl		 PMID:20227374 GO_REF:0000107 NCBI chr 2:29,556,831...29,616,960
Ensembl chr 2:27,822,679...27,882,313 		JBrowse link
nucleotide-excision repair, preincision complex assembly term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Gtf2h5 general transcription factor IIH subunit 5 involved_in
acts_upstream_of_or_within		 IBA
ISO		 GO_REF:0000033
MGI:5514340 (PMID:23637614)		 GO_Central
RGD		 PMID:23637614 GO_REF:0000033 NCBI chr 1:46,656,804...46,663,512
Ensembl chr 1:46,656,859...46,664,939 		JBrowse link
G LOC120103497 general transcription factor IIH subunit 5-like involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr 6:27,109,209...27,114,478
Ensembl chr 6:27,111,331...27,111,546 		JBrowse link
photoreactive repair term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Cry2 cryptochrome circadian regulator 2 NOT|involved_in ISO (PMID:12627958) RGD PMID:12627958 NCBI chr 3:98,830,479...98,860,437
Ensembl chr 3:78,374,995...78,404,965 		JBrowse link
positive regulation of base-excision repair term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Fam168a family with sequence similarity 168, member A involved_in ISO
IEA
IBA		 (PMID:25260657)
GO_REF:0000107
GO_REF:0000033		 RGD
Ensembl
GO_Central		 PMID:25260657 GO_REF:0000033 GO_REF:0000107 NCBI chr 1:164,469,447...164,615,542
Ensembl chr 1:155,057,352...155,201,220 		JBrowse link
G Rps3 ribosomal protein S3 involved_in ISO (PMID:18973764) RGD PMID:18973764 NCBI chr 1:163,190,476...163,195,885
Ensembl chr 1:153,777,472...153,783,680 		JBrowse link
positive regulation of DNA repair term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Abraxas1 abraxas 1, BRCA1 A complex subunit involved_in IEA
ISO
ISS		 GO_REF:0000107
(PMID:17525340), (PMID:19261748)
GO_REF:0000024		 Ensembl
RGD
UniProt		 PMID:17525340 PMID:19261748 GO_REF:0000024 GO_REF:0000107 NCBI chr14:9,100,650...9,115,012
Ensembl chr14:8,796,266...8,810,622 		JBrowse link
G Actl6a actin-like 6A involved_in ISO
IEA		 (PMID:23979016)
GO_REF:0000107		 RGD
Ensembl		 PMID:23979016 GO_REF:0000107 NCBI chr 2:117,413,206...117,436,758
Ensembl chr 2:115,492,285...115,508,401 		JBrowse link
G Actr5 actin related protein 5 involved_in ISO (PMID:23979016) RGD PMID:23979016 NCBI chr 3:167,702,299...167,715,736
Ensembl chr 3:147,282,624...147,296,110 		JBrowse link
G Actr8 actin related protein 8 involved_in ISO (PMID:23979016) RGD PMID:23979016 NCBI chr16:5,170,649...5,192,883
Ensembl chr16:5,164,129...5,178,577 		JBrowse link
G Apbb1 amyloid beta precursor protein binding family B member 1 involved_in ISO (PMID:17121854) RGD PMID:17121854 NCBI chr 1:169,308,719...169,332,372
Ensembl chr 1:159,896,880...159,920,627 		JBrowse link
G Babam1 BRISC and BRCA1 A complex member 1 involved_in ISS
IEA
ISO		 GO_REF:0000024
GO_REF:0000002
(PMID:19261746), (PMID:19261748), (PMID:19261749)		 UniProt
InterPro
RGD		 PMID:19261746 PMID:19261748 PMID:19261749 GO_REF:0000002 GO_REF:0000024 NCBI chr16:18,102,885...18,108,916
Ensembl chr16:18,068,884...18,074,923 		JBrowse link
G Babam2 BRISC and BRCA1 A complex member 2 involved_in ISO
IEA
ISS		 (PMID:19261748)
GO_REF:0000107
GO_REF:0000104
GO_REF:0000024		 RGD
Ensembl
UniProt		 PMID:19261748 GO_REF:0000024 GO_REF:0000104 GO_REF:0000107 NCBI chr 6:30,089,065...30,467,508
Ensembl chr 6:24,369,022...24,833,951 		JBrowse link
G Brca1 BRCA1, DNA repair associated involved_in ISO (PMID:17525340), (PMID:19261748) RGD PMID:17525340 PMID:19261748 NCBI chr10:86,917,693...86,978,012
Ensembl chr10:86,418,000...86,477,304 		JBrowse link
G Brcc3 BRCA1/BRCA2-containing complex subunit 3 involved_in ISO
ISS		 (PMID:17525341), (PMID:19261746), (PMID:19261748)
GO_REF:0000024		 RGD
UniProt		 PMID:17525341 PMID:19261746 PMID:19261748 GO_REF:0000024 NCBI chr 9:2,073,927...2,076,469
Ensembl chr 9:1,986,575...1,991,080 		JBrowse link
G Brcc3dc BRCA1/BRCA2-containing complex, subunit 3, domain containing involved_in IEA GO_REF:0000104 UniProt GO_REF:0000104 NCBI chr 7:45,901,321...45,903,078
Ensembl chr 7:44,005,646...44,016,670 		JBrowse link
G Cbx8 chromobox 8 IMP RGD PMID:23572236 RGD:9586727 NCBI chr10:104,793,062...104,795,500
Ensembl chr10:104,294,518...104,297,024 		JBrowse link
G Ccdc117 coiled-coil domain containing 117 involved_in ISO
ISS		 (PMID:30742009)
GO_REF:0000024		 RGD
UniProt		 PMID:30742009 GO_REF:0000024 NCBI chr14:84,614,282...84,623,648
Ensembl chr14:80,400,294...80,409,659 		JBrowse link
G Cebpg CCAAT/enhancer binding protein gamma involved_in ISS
ISO		 PMID:16255782
(PMID:16255782)		 RGD PMID:16255782 PMID:16255782 RGD:8554294 NCBI chr 1:96,820,981...96,829,736
Ensembl chr 1:87,684,019...87,694,569 		JBrowse link
G Dhx9 DExH-box helicase 9 involved_in ISO
IEA		 (PMID:24049074)
GO_REF:0000107		 RGD
Ensembl		 PMID:24049074 GO_REF:0000107 NCBI chr13:68,152,813...68,189,580
Ensembl chr13:65,602,323...65,639,069 		JBrowse link
G Egfr epidermal growth factor receptor involved_in ISO (PMID:17115032) RGD PMID:17115032 NCBI chr14:95,378,626...95,551,358
Ensembl chr14:91,177,067...91,344,382 		JBrowse link
G Ercc6 ERCC excision repair 6, chromatin remodeling factor involved_in ISO
IEA		 UniProtKB:P0DP91|UniProtKB:Q03468 (PMID:22483866)
GO_REF:0000107		 RGD
Ensembl		 PMID:22483866 GO_REF:0000107 NCBI chr16:7,771,311...7,841,895
Ensembl chr16:7,765,013...7,835,587 		JBrowse link
G Ercc8 ERCC excision repair 8, CSA ubiquitin ligase complex subunit involved_in ISO (PMID:7664335) RGD PMID:7664335 NCBI chr 2:41,380,901...41,418,294
Ensembl chr 2:39,647,452...39,684,859 		JBrowse link
G Eya1 EYA transcriptional coactivator and phosphatase 1 involved_in ISO
IBA		 (PMID:19234442)
GO_REF:0000033		 RGD
GO_Central		 PMID:19234442 GO_REF:0000033 NCBI chr 5:9,646,599...9,884,609
Ensembl chr 5:4,955,543...5,101,483 		JBrowse link
G Eya2 EYA transcriptional coactivator and phosphatase 2 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr 3:174,754,772...174,938,035
Ensembl chr 3:154,335,400...154,518,793 		JBrowse link
G Eya3 EYA transcriptional coactivator and phosphatase 3 involved_in ISO
IEA
IBA		 (PMID:19234442)
GO_REF:0000107
GO_REF:0000033		 RGD
Ensembl
GO_Central		 PMID:19234442 GO_REF:0000033 GO_REF:0000107 NCBI chr 5:150,090,535...150,218,855
Ensembl chr 5:144,806,577...144,934,518 		JBrowse link
G Eya4 EYA transcriptional coactivator and phosphatase 4 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr 1:23,991,431...24,235,132
Ensembl chr 1:22,172,275...22,415,976 		JBrowse link
G Fgf10 fibroblast growth factor 10 involved_in ISO
IEA		 (PMID:14975937)
GO_REF:0000107		 RGD
Ensembl		 PMID:14975937 GO_REF:0000107 NCBI chr 2:52,533,939...52,610,980
Ensembl chr 2:50,800,992...50,876,866 		JBrowse link
G Ino80 INO80 complex ATPase subunit involved_in ISO
IEA		 (PMID:23979016)
GO_REF:0000107		 RGD
Ensembl		 PMID:23979016 GO_REF:0000107 NCBI chr 3:126,822,280...126,919,532
Ensembl chr 3:106,368,455...106,467,911 		JBrowse link
G Ino80b INO80 complex subunit B involved_in ISO (PMID:23979016) RGD PMID:23979016 NCBI chr 4:117,185,427...117,188,930
Ensembl chr 4:115,627,908...115,631,456 		JBrowse link
G Ino80c INO80 complex subunit C involved_in ISO
IEA		 (PMID:23979016)
GO_REF:0000107		 RGD
Ensembl		 PMID:23979016 GO_REF:0000107 NCBI chr18:15,653,508...15,752,455
Ensembl chr18:15,378,770...15,393,403 		JBrowse link
G Ino80d INO80 complex subunit D involved_in ISO
IEA		 (PMID:23979016)
GO_REF:0000107		 RGD
Ensembl		 PMID:23979016 GO_REF:0000107 NCBI chr 9:71,940,941...72,007,879
Ensembl chr 9:64,457,165...64,515,242 		JBrowse link
G Mcrs1 microspherule protein 1 involved_in ISO
IEA		 (PMID:23979016)
GO_REF:0000107		 RGD
Ensembl		 PMID:23979016 GO_REF:0000107 NCBI chr 7:132,262,719...132,271,533
Ensembl chr 7:130,383,853...130,392,685 		JBrowse link
G Mgmt O-6-methylguanine-DNA methyltransferase IDA RGD PMID:1945835 RGD:729332 NCBI chr 1:201,140,832...201,367,481
Ensembl chr 1:191,710,930...191,937,756 		JBrowse link
G Nfrkb nuclear factor related to kappa B binding protein involved_in ISO
IEA		 (PMID:23979016)
GO_REF:0000107		 RGD
Ensembl		 PMID:23979016 GO_REF:0000107 NCBI chr 8:38,089,574...38,121,506
Ensembl chr 8:29,831,812...29,863,359 		JBrowse link
G Npas2 neuronal PAS domain protein 2 involved_in ISO (PMID:18819933) RGD PMID:18819933 NCBI chr 9:48,959,225...49,138,036
Ensembl chr 9:41,463,830...41,642,320 		JBrowse link
G Parg poly (ADP-ribose) glycohydrolase IMP RGD PMID:15158362 RGD:2316739 NCBI chr16:7,442,696...7,550,585
Ensembl chr16:7,436,476...7,544,273 		JBrowse link
G Pcna proliferating cell nuclear antigen involved_in ISO
IEA
ISS		 (PMID:24939902)
GO_REF:0000107
GO_REF:0000114
GO_REF:0000024		 RGD
Ensembl
ComplexPortal
UniProt		 PMID:24939902 GO_REF:0000024 GO_REF:0000107 GO_REF:0000114 NCBI chr 3:139,951,948...139,955,820
Ensembl chr 3:119,498,810...119,502,995 		JBrowse link
G Rnf168 ring finger protein 168 involved_in IEA
ISS
ISO		 GO_REF:0000104
GO_REF:0000024
(PMID:19203578), (PMID:19203579), (PMID:23760478)		 UniProt
RGD		 PMID:19203578 PMID:19203579 PMID:23760478 GO_REF:0000024 GO_REF:0000104 NCBI chr11:81,991,352...82,013,306
Ensembl chr11:68,486,321...68,508,277 		JBrowse link
G Rnf8 ring finger protein 8 involved_in ISO
IEA
ISS		 (PMID:18001824), (PMID:18001825)
GO_REF:0000104
GO_REF:0000024		 RGD
UniProt		 PMID:18001824 PMID:18001825 GO_REF:0000024 GO_REF:0000104 NCBI chr20:7,683,890...7,708,437
Ensembl chr20:7,682,322...7,708,491 		JBrowse link
G Rps3 ribosomal protein S3 involved_in ISO (PMID:23911537) RGD PMID:23911537 NCBI chr 1:163,190,476...163,195,885
Ensembl chr 1:153,777,472...153,783,680 		JBrowse link
G Ruvbl1 RuvB-like AAA ATPase 1 involved_in ISO (PMID:23979016) RGD PMID:23979016 NCBI chr 4:122,489,754...122,524,666
Ensembl chr 4:120,932,417...121,029,384 		JBrowse link
G Ruvbl2 RuvB-like AAA ATPase 2 involved_in ISO
IEA		 (PMID:23979016)
GO_REF:0000107		 RGD
Ensembl		 PMID:23979016 GO_REF:0000107 NCBI chr 1:105,038,487...105,051,851
Ensembl chr 1:95,901,701...95,915,342 		JBrowse link
G Sirt1 sirtuin 1 involved_in ISO
IEA		 (PMID:19934257)
GO_REF:0000107		 RGD
Ensembl		 PMID:19934257 GO_REF:0000107 NCBI chr20:25,305,953...25,328,000
Ensembl chr20:25,306,917...25,329,260 		JBrowse link
G Smchd1 structural maintenance of chromosomes flexible hinge domain containing 1 involved_in ISO
IEA		 (PMID:24790221)
GO_REF:0000107		 RGD
Ensembl		 PMID:24790221 GO_REF:0000107 NCBI chr 9:118,690,050...118,837,281
Ensembl chr 9:111,247,702...111,349,665 		JBrowse link
G Tfpt TCF3 fusion partner involved_in ISO
IEA		 (PMID:23979016)
GO_REF:0000107		 RGD
Ensembl		 PMID:23979016 GO_REF:0000107 NCBI chr 1:74,502,994...74,512,766
Ensembl chr 1:65,582,359...65,611,689 		JBrowse link
G Tigar TP53 induced glycolysis regulatory phosphatase involved_in ISO
IEA		 (PMID:25928429)
GO_REF:0000107		 RGD
Ensembl		 PMID:25928429 GO_REF:0000107 NCBI chr 4:161,613,306...161,632,248
Ensembl chr 4:159,927,139...159,946,029
Ensembl chr 6:159,927,139...159,946,029 		JBrowse link
G Tmem161a transmembrane protein 161A involved_in ISO (PMID:16551573) RGD PMID:16551573 NCBI chr16:19,272,433...19,282,173
Ensembl chr16:19,238,487...19,248,087 		JBrowse link
G Trim28 tripartite motif-containing 28 involved_in ISO
IEA		 (PMID:17178852)
GO_REF:0000107		 RGD
Ensembl		 PMID:17178852 GO_REF:0000107 NCBI chr 1:82,724,842...82,731,566
Ensembl chr 1:73,652,709...73,659,380 		JBrowse link
G Ube2n ubiquitin-conjugating enzyme E2N involved_in ISO (PMID:16129784) RGD PMID:16129784 NCBI chr 7:32,041,190...32,071,252
Ensembl chr 7:30,154,616...30,184,355 		JBrowse link
G Ube2v2 ubiquitin conjugating enzyme E2 V2 IMP RGD PMID:12750002 RGD:1299567 NCBI chr11:98,808,681...98,842,583
Ensembl chr11:85,304,526...85,336,369 		JBrowse link
G Uchl5 ubiquitin C-terminal hydrolase L5 involved_in ISO (PMID:23979016) RGD PMID:23979016 NCBI chr13:58,070,947...58,106,825
Ensembl chr13:55,520,729...55,556,502 		JBrowse link
G Uimc1 ubiquitin interaction motif containing 1 involved_in ISS
IBA
ISO
IEA		 GO_REF:0000024
GO_REF:0000033
(PMID:17525340), (PMID:17525341), (PMID:17525342), (PMID:19261748)
GO_REF:0000107		 UniProt
GO_Central
RGD
Ensembl		 PMID:17525340 PMID:17525341 PMID:17525342 PMID:19261748 GO_REF:0000024 GO_REF:0000033 GO_REF:0000107 NCBI chr17:9,528,923...9,597,967
Ensembl chr17:9,527,794...9,592,799 		JBrowse link
G Wrap53 WD repeat containing, antisense to TP53 involved_in ISO
IEA
ISS		 (PMID:25512560)
GO_REF:0000107
GO_REF:0000024		 RGD
Ensembl
UniProt		 PMID:25512560 GO_REF:0000024 GO_REF:0000107 NCBI chr10:54,780,873...54,797,919
Ensembl chr10:54,282,105...54,298,929 		JBrowse link
G Yy1 YY1 transcription factor involved_in ISO
IEA		 (PMID:23979016)
GO_REF:0000107		 RGD
Ensembl		 PMID:23979016 GO_REF:0000107 NCBI chr 6:133,471,615...133,500,875
Ensembl chr 6:127,707,596...127,732,747 		JBrowse link
positive regulation of double-strand break repair term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ager advanced glycosylation end product-specific receptor involved_in IEA
ISO
ISS		 GO_REF:0000107
(PMID:28977635)
GO_REF:0000024		 Ensembl
RGD
UniProt		 PMID:28977635 GO_REF:0000024 GO_REF:0000107 NCBI chr20:4,152,758...4,155,956
Ensembl chr20:4,147,890...4,151,078 		JBrowse link
G Atm ATM serine/threonine kinase involved_in ISO (PMID:15790808) RGD PMID:15790808 NCBI chr 8:62,724,939...62,829,040
Ensembl chr 8:53,831,093...53,932,437 		JBrowse link
G Ddx11 DEAD/H-box helicase 11 involved_in ISO (PMID:23797032) RGD PMID:23797032 NCBI chr 9:113,204,886...113,309,692
Ensembl chr 9:105,833,504...105,862,550 		JBrowse link
G Fmn2 formin 2 involved_in ISO
IEA		 (PMID:26287480)
GO_REF:0000107		 RGD
Ensembl		 PMID:26287480 GO_REF:0000107 NCBI chr13:88,986,863...89,303,789
Ensembl chr13:86,453,926...86,771,411 		JBrowse link
G Foxm1 forkhead box M1 involved_in ISO
IEA		 (PMID:17101782)
GO_REF:0000107		 RGD
Ensembl		 PMID:17101782 GO_REF:0000107 NCBI chr 4:163,325,628...163,338,100
Ensembl chr 4:161,638,816...161,650,684 		JBrowse link
G Khdc3 KH domain containing 3, subcortical maternal complex member involved_in ISS
ISO		 GO_REF:0000024
(PMID:29125140), (PMID:33115731)		 UniProt
RGD		 PMID:29125140 PMID:33115731 GO_REF:0000024 NCBI chr 8:82,722,980...82,724,884
Ensembl chr 8:73,842,344...73,844,248 		JBrowse link
G Mgmt O-6-methylguanine-DNA methyltransferase involved_in ISO
IEA		 (PMID:24147153)
GO_REF:0000107		 RGD
Ensembl		 PMID:24147153 GO_REF:0000107 NCBI chr 1:201,140,832...201,367,481
Ensembl chr 1:191,710,930...191,937,756 		JBrowse link
G Mre11 MRE11 homolog, double strand break repair nuclease involved_in ISO (PMID:15790808) RGD PMID:15790808 NCBI chr 8:19,900,211...19,961,906
Ensembl chr 8:11,632,354...11,678,279 		JBrowse link
G Nbn nibrin involved_in IEA
ISO		 GO_REF:0000107
(PMID:15790808)		 Ensembl
RGD		 PMID:15790808 GO_REF:0000107 NCBI chr 5:34,256,678...34,291,163
Ensembl chr 5:29,459,457...29,494,150 		JBrowse link
G Ooep oocyte expressed protein involved_in ISO (PMID:29125140) RGD PMID:29125140 NCBI chr 8:88,103,675...88,104,848
Ensembl chr 8:79,223,375...79,224,541 		JBrowse link
G Rad50 RAD50 double strand break repair protein involved_in IEA
ISO		 GO_REF:0000107
(PMID:15790808)		 Ensembl
RGD		 PMID:15790808 GO_REF:0000107 NCBI chr10:38,310,147...38,362,100
Ensembl chr10:37,808,726...37,861,396 		JBrowse link
G Sirt1 sirtuin 1 involved_in ISO
IEA		 (PMID:32538779)
GO_REF:0000107		 RGD
Ensembl		 PMID:32538779 GO_REF:0000107 NCBI chr20:25,305,953...25,328,000
Ensembl chr20:25,306,917...25,329,260 		JBrowse link
G Sirt6 sirtuin 6 involved_in ISO
IEA		 (PMID:23911928), (PMID:31995034), (PMID:32538779)
GO_REF:0000107
(PMID:31002797)		 RGD
Ensembl		 PMID:23911928 PMID:31002797 PMID:31995034 PMID:32538779 GO_REF:0000107 NCBI chr 7:8,733,056...8,738,543
Ensembl chr 7:8,082,364...8,098,914 		JBrowse link
G Slf1 SMC5-SMC6 complex localization factor 1 involved_in ISO (PMID:25931565) RGD PMID:25931565 NCBI chr 2:8,498,776...8,606,251
Ensembl chr 2:6,767,015...6,867,149 		JBrowse link
G Slf2 SMC5-SMC6 complex localization factor 2 involved_in ISO
IEA
IBA		 (PMID:25931565)
GO_REF:0000107
GO_REF:0000033		 RGD
Ensembl
GO_Central		 PMID:25931565 GO_REF:0000033 GO_REF:0000107 NCBI chr 1:253,731,979...253,794,577
Ensembl chr 1:243,782,246...243,845,250 		JBrowse link
G Spidr scaffold protein involved in DNA repair involved_in ISO (PMID:23509288) RGD PMID:23509288 NCBI chr11:98,270,779...98,511,760
Ensembl chr11:84,766,593...85,007,600 		JBrowse link
G Spire1 spire-type actin nucleation factor 1 involved_in ISO
IEA		 (PMID:26287480)
GO_REF:0000107		 RGD
Ensembl		 PMID:26287480 GO_REF:0000107 NCBI chr18:63,311,800...63,441,545
Ensembl chr18:61,041,290...61,171,899 		JBrowse link
G Spire2 spire-type actin nucleation factor 2 involved_in ISO
IEA		 (PMID:26287480)
GO_REF:0000107		 RGD
Ensembl		 PMID:26287480 GO_REF:0000107 NCBI chr19:68,281,878...68,320,427
Ensembl chr19:51,373,228...51,411,920 		JBrowse link
G Timeless timeless circadian regulator involved_in ISO
IEA
ISS		 (PMID:23797032)
GO_REF:0000107
GO_REF:0000024		 RGD
Ensembl
UniProt		 PMID:23797032 GO_REF:0000024 GO_REF:0000107 NCBI chr 7:1,239,388...1,263,344
Ensembl chr 7:654,822...678,738 		JBrowse link
G Ube2n ubiquitin-conjugating enzyme E2N involved_in ISO (PMID:16129784) RGD PMID:16129784 NCBI chr 7:32,041,190...32,071,252
Ensembl chr 7:30,154,616...30,184,355 		JBrowse link
G Ube2v2 ubiquitin conjugating enzyme E2 V2 involved_in ISO (PMID:16129784) RGD PMID:16129784 NCBI chr11:98,808,681...98,842,583
Ensembl chr11:85,304,526...85,336,369 		JBrowse link
G Wrap53 WD repeat containing, antisense to TP53 involved_in ISS
IEA
ISO		 GO_REF:0000024
GO_REF:0000107
(PMID:27715493)		 UniProt
Ensembl
RGD		 PMID:27715493 GO_REF:0000024 GO_REF:0000107 NCBI chr10:54,780,873...54,797,919
Ensembl chr10:54,282,105...54,298,929 		JBrowse link
G Zcwpw1 zinc finger CW-type and PWWP domain containing 1 involved_in ISO (PMID:31453335), (PMID:32352380), (PMID:32374261), (PMID:32744506) RGD PMID:31453335 PMID:32352380 PMID:32374261 PMID:32744506 NCBI chr12:24,517,428...24,547,942
Ensembl chr12:18,880,633...18,910,711 		JBrowse link
positive regulation of double-strand break repair via homologous recombination term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Actb actin, beta involved_in ISO
IEA		 (PMID:27153538)
GO_REF:0000107		 RGD
Ensembl		 PMID:27153538 GO_REF:0000107 NCBI chr12:16,776,664...16,779,634
Ensembl chr12:11,663,109...11,672,877 		JBrowse link
G Actl6a actin-like 6A involved_in ISO
IEA		 (PMID:27153538)
GO_REF:0000107		 RGD
Ensembl		 PMID:27153538 GO_REF:0000107 NCBI chr 2:117,413,206...117,436,758
Ensembl chr 2:115,492,285...115,508,401 		JBrowse link
G Actr2 actin related protein 2 involved_in ISO
IEA
ISS		 (PMID:29925947)
GO_REF:0000107
GO_REF:0000024		 RGD
Ensembl
UniProt		 PMID:29925947 GO_REF:0000024 GO_REF:0000107 NCBI chr14:98,500,119...98,535,092
Ensembl chr14:94,296,443...94,340,524 		JBrowse link
G Arid2 AT-rich interaction domain 2 involved_in ISO
IEA		 (PMID:28381560)
GO_REF:0000107		 RGD
Ensembl		 PMID:28381560 GO_REF:0000107 NCBI chr 7:129,326,371...129,443,813
Ensembl chr 7:127,447,278...127,563,512 		JBrowse link
G Blm BLM RecQ like helicase acts_upstream_of_or_within ISO MGI:2448558 (PMID:25520194) RGD PMID:25520194 NCBI chr 1:143,819,072...143,905,300
Ensembl chr 1:134,409,857...134,484,312 		JBrowse link
G Brd8 bromodomain containing 8 involved_in ISO
IEA		 (PMID:27153538)
GO_REF:0000107		 RGD
Ensembl		 PMID:27153538 GO_REF:0000107 NCBI chr18:26,455,824...26,504,106
Ensembl chr18:26,181,732...26,229,884 		JBrowse link
G Crebbp CREB binding protein involved_in ISS
ISO		 GO_REF:0000024
(PMID:38128537)		 UniProt
RGD		 PMID:38128537 GO_REF:0000024 NCBI chr10:11,842,307...11,968,266
Ensembl chr10:11,335,953...11,461,888 		JBrowse link
G Dmap1 DNA methyltransferase 1-associated protein 1 involved_in ISO
IEA		 (PMID:27153538)
GO_REF:0000107		 RGD
Ensembl		 PMID:27153538 GO_REF:0000107 NCBI chr 5:136,380,211...136,388,229
Ensembl chr 5:131,143,729...131,151,742 		JBrowse link
G Ep400 E1A binding protein p400 involved_in ISO
IEA		 (PMID:27153538)
GO_REF:0000107		 RGD
Ensembl		 PMID:27153538 GO_REF:0000107 NCBI chr12:51,551,665...51,658,635
Ensembl chr12:45,891,916...45,998,861 		JBrowse link
G Epc1 enhancer of polycomb homolog 1 involved_in ISO (PMID:27153538) RGD PMID:27153538 NCBI chr17:59,198,513...59,289,535
Ensembl chr17:54,503,358...54,594,425 		JBrowse link
G Epc2 enhancer of polycomb homolog 2 involved_in ISO (PMID:27153538) RGD PMID:27153538 NCBI chr 3:54,276,187...54,376,373
Ensembl chr 3:33,867,219...33,967,150 		JBrowse link
G Ercc6 ERCC excision repair 6, chromatin remodeling factor involved_in ISO
IEA		 (PMID:25820262)
GO_REF:0000107		 RGD
Ensembl		 PMID:25820262 GO_REF:0000107 NCBI chr16:7,771,311...7,841,895
Ensembl chr16:7,765,013...7,835,587 		JBrowse link
G Fancb FA complementation group B involved_in
acts_upstream_of_or_within		 IBA
ISO		 GO_REF:0000033
MGI:1328362 (PMID:25520194)		 GO_Central
RGD		 PMID:25520194 GO_REF:0000033 NCBI chr  X:33,035,387...33,051,993
Ensembl chr  X:29,403,771...29,420,192 		JBrowse link
G Fus Fus RNA binding protein involved_in ISO (PMID:10567410) RGD PMID:10567410 NCBI chr 1:192,007,011...192,020,887
Ensembl chr 1:182,576,545...182,590,414 		JBrowse link
G Hdgfl2 HDGF like 2 involved_in ISO
ISS		 (PMID:26721387)
GO_REF:0000024		 RGD
UniProt		 PMID:26721387 GO_REF:0000024 NCBI chr 9:996,687...1,016,352
Ensembl chr 9:909,614...929,186 		JBrowse link
G Helq helicase, POLQ-like involved_in ISO
IEA		 (PMID:24005329)
GO_REF:0000107		 RGD
Ensembl		 PMID:24005329 GO_REF:0000107 NCBI chr14:9,122,978...9,167,310
Ensembl chr14:8,818,592...8,862,960 		JBrowse link
G Ing3 inhibitor of growth family, member 3 involved_in ISO
IEA		 (PMID:27153538)
GO_REF:0000107		 RGD
Ensembl		 PMID:27153538 GO_REF:0000107 NCBI chr 4:51,439,218...51,469,502
Ensembl chr 4:50,477,962...50,503,715 		JBrowse link
G Kat5 lysine acetyltransferase 5 involved_in ISS
ISO
IEA		 GO_REF:0000024
(PMID:27153538), (PMID:32832608), (PMID:38961290)
GO_REF:0000107		 UniProt
RGD
Ensembl		 PMID:27153538 PMID:32832608 PMID:38961290 GO_REF:0000024 GO_REF:0000107 NCBI chr 1:212,325,089...212,332,640
Ensembl chr 1:202,895,751...202,903,458 		JBrowse link
G Khdc3 KH domain containing 3, subcortical maternal complex member involved_in ISO
ISS		 (PMID:31609975)
(PMID:25936915)
GO_REF:0000024		 RGD
UniProt		 PMID:25936915 PMID:31609975 GO_REF:0000024 NCBI chr 8:82,722,980...82,724,884
Ensembl chr 8:73,842,344...73,844,248 		JBrowse link
G Mbtd1 mbt domain containing 1 involved_in ISO
IEA		 (PMID:27153538)
GO_REF:0000107		 RGD
Ensembl		 PMID:27153538 GO_REF:0000107 NCBI chr10:79,336,041...79,392,315
Ensembl chr10:78,839,036...78,893,720 		JBrowse link
G Meaf6 MYST/Esa1-associated factor 6 involved_in ISO (PMID:27153538) RGD PMID:27153538 NCBI chr 5:142,628,281...142,653,076
Ensembl chr 5:137,344,380...137,370,014 		JBrowse link
G Morf4l1 mortality factor 4 like 1 involved_in ISO
IEA		 (PMID:27153538)
GO_REF:0000107		 RGD
Ensembl		 PMID:27153538 GO_REF:0000107 NCBI chr 8:99,522,801...99,544,432
Ensembl chr 8:90,642,988...90,664,519 		JBrowse link
G Morf4l2 mortality factor 4 like 2 involved_in ISO (PMID:27153538) RGD PMID:27153538 NCBI chr  X:104,874,850...104,885,946
Ensembl chr  X:100,082,404...100,093,728 		JBrowse link
G Mrgbp MRG domain binding protein involved_in ISO
IEA		 (PMID:27153538)
GO_REF:0000107		 RGD
Ensembl		 PMID:27153538 GO_REF:0000107 NCBI chr 3:188,074,695...188,078,162
Ensembl chr 3:167,697,185...167,700,592 		JBrowse link
G Mrnip MRN complex interacting protein involved_in ISO (PMID:27568553) RGD PMID:27568553 NCBI chr10:35,002,440...35,026,555
Ensembl chr10:34,501,384...34,525,469 		JBrowse link
G Ooep oocyte expressed protein involved_in ISO (PMID:29955025) RGD PMID:29955025 NCBI chr 8:88,103,675...88,104,848
Ensembl chr 8:79,223,375...79,224,541 		JBrowse link
G Parp1 poly (ADP-ribose) polymerase 1 involved_in ISO
IEA
ISS		 (PMID:26344098), (PMID:30356214)
GO_REF:0000107
GO_REF:0000024		 RGD
Ensembl
UniProt		 PMID:26344098 PMID:30356214 GO_REF:0000024 GO_REF:0000107 NCBI chr13:94,839,484...94,871,295
Ensembl chr13:92,307,586...92,339,404 		JBrowse link
G Peli1 pellino E3 ubiquitin protein ligase 1 involved_in ISO
IEA		 (PMID:30952868)
GO_REF:0000107		 RGD
Ensembl		 PMID:30952868 GO_REF:0000107 NCBI chr14:99,455,970...99,510,474
Ensembl chr14:95,254,589...95,308,285
Ensembl chr 1:95,254,589...95,308,285 		JBrowse link
G Pias4 protein inhibitor of activated STAT, 4 involved_in ISO
IEA		 (PMID:32832608)
GO_REF:0000107		 RGD
Ensembl		 PMID:32832608 GO_REF:0000107 NCBI chr 7:9,197,032...9,210,557
Ensembl chr 7:8,546,312...8,559,808 		JBrowse link
G Prmt1 protein arginine methyltransferase 1 involved_in ISS
IEA
ISO		 GO_REF:0000024
GO_REF:0000107
(PMID:15741314), (PMID:29651020)		 UniProt
Ensembl
RGD		 PMID:15741314 PMID:29651020 GO_REF:0000024 GO_REF:0000107 NCBI chr 1:104,595,339...104,605,552
Ensembl chr 1:95,458,850...95,468,345 		JBrowse link
G Rad51ap1 RAD51 associated protein 1 involved_in ISO
IEA		 (PMID:17996710), (PMID:17996711)
GO_REF:0000107		 RGD
Ensembl		 PMID:17996710 PMID:17996711 GO_REF:0000107 NCBI chr 4:161,445,610...161,458,661
Ensembl chr 4:159,759,459...159,772,524 		JBrowse link
G Rnf126 ring finger protein 126 involved_in ISO
IEA		 (PMID:36563124)
GO_REF:0000107		 RGD
Ensembl		 PMID:36563124 GO_REF:0000107 NCBI chr 7:10,590,013...10,597,585
Ensembl chr 7:9,938,229...9,946,738 		JBrowse link
G Rnf8 ring finger protein 8 involved_in ISS
ISO		 GO_REF:0000024
(PMID:23115235)		 UniProt
RGD		 PMID:23115235 GO_REF:0000024 NCBI chr20:7,683,890...7,708,437
Ensembl chr20:7,682,322...7,708,491 		JBrowse link
G Ruvbl1 RuvB-like AAA ATPase 1 involved_in ISO (PMID:27153538) RGD PMID:27153538 NCBI chr 4:122,489,754...122,524,666
Ensembl chr 4:120,932,417...121,029,384 		JBrowse link
G Ruvbl2 RuvB-like AAA ATPase 2 involved_in ISO
IEA		 (PMID:27153538)
GO_REF:0000107		 RGD
Ensembl		 PMID:27153538 GO_REF:0000107 NCBI chr 1:105,038,487...105,051,851
Ensembl chr 1:95,901,701...95,915,342 		JBrowse link
G Skp2 S-phase kinase associated protein 2 involved_in ISO
IEA		 (PMID:22464731)
GO_REF:0000107		 RGD
Ensembl		 PMID:22464731 GO_REF:0000107 NCBI chr 2:59,888,406...59,916,471
Ensembl chr 2:58,161,229...58,189,338 		JBrowse link
G Timeless timeless circadian regulator involved_in ISO
IEA
ISS		 (PMID:26344098), (PMID:30356214)
GO_REF:0000107
GO_REF:0000024		 RGD
Ensembl
UniProt		 PMID:26344098 PMID:30356214 GO_REF:0000024 GO_REF:0000107 NCBI chr 7:1,239,388...1,263,344
Ensembl chr 7:654,822...678,738 		JBrowse link
G Trrap transformation/transcription domain-associated protein involved_in ISO (PMID:27153538) RGD PMID:27153538 NCBI chr12:14,851,758...14,941,444
Ensembl chr12:9,738,006...9,827,674 		JBrowse link
G Vps72 vacuolar protein sorting 72 homolog involved_in ISO
IEA		 (PMID:27153538)
GO_REF:0000107		 RGD
Ensembl		 PMID:27153538 GO_REF:0000107 NCBI chr 2:185,367,329...185,379,199
Ensembl chr 2:182,678,609...182,690,182 		JBrowse link
G Was WASP actin nucleation promoting factor involved_in ISO
IEA		 (PMID:29925947)
GO_REF:0000107		 RGD
Ensembl		 PMID:29925947 GO_REF:0000107 NCBI chr  X:17,077,057...17,085,802
Ensembl chr  X:14,405,124...14,413,849 		JBrowse link
G Wdr48 WD repeat domain 48 involved_in ISO
IEA		 (PMID:27239033), (PMID:27463890)
GO_REF:0000107		 RGD
Ensembl		 PMID:27239033 PMID:27463890 GO_REF:0000107 NCBI chr 8:128,499,721...128,532,930
Ensembl chr 8:119,622,048...119,655,264 		JBrowse link
G Wrap53 WD repeat containing, antisense to TP53 involved_in ISO
IEA
ISS		 (PMID:25512560)
GO_REF:0000107
GO_REF:0000024		 RGD
Ensembl
UniProt		 PMID:25512560 GO_REF:0000024 GO_REF:0000107 NCBI chr10:54,780,873...54,797,919
Ensembl chr10:54,282,105...54,298,929 		JBrowse link
G Yeats4 YEATS domain containing 4 involved_in ISO
IEA		 (PMID:27153538)
GO_REF:0000107		 RGD
Ensembl		 PMID:27153538 GO_REF:0000107 NCBI chr 7:54,744,220...54,751,361
Ensembl chr 7:52,858,305...52,865,635 		JBrowse link
positive regulation of double-strand break repair via nonhomologous end joining term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Cyren cell cycle regulator of NHEJ involved_in ISO (PMID:30017584) RGD PMID:30017584 NCBI chr 4:64,514,477...64,519,896
Ensembl chr 4:63,547,335...63,551,602 		JBrowse link
G Fh fumarate hydratase involved_in ISO
ISS		 (PMID:26237645)
GO_REF:0000024		 RGD
UniProt		 PMID:26237645 GO_REF:0000024 NCBI chr13:90,056,565...90,082,450
Ensembl chr13:87,524,337...87,550,266 		JBrowse link
G Kdm4d lysine demethylase 4D acts_upstream_of_or_within ISO (PMID:24550317) RGD PMID:24550317 NCBI chr 8:19,561,253...19,586,412
Ensembl chr 8:11,268,859...11,305,290 		JBrowse link
G Kmt5b lysine methyltransferase 5B involved_in ISS
IEA
ISO		 GO_REF:0000024
GO_REF:0000107
(PMID:28114273)		 UniProt
Ensembl
RGD		 PMID:28114273 GO_REF:0000024 GO_REF:0000107 NCBI chr 1:210,429,672...210,479,042
Ensembl chr 1:201,000,444...201,049,819 		JBrowse link
G Kmt5c lysine methyltransferase 5C involved_in ISO
IEA
ISS		 (PMID:28114273)
GO_REF:0000107
GO_REF:0000024		 RGD
Ensembl
UniProt		 PMID:28114273 GO_REF:0000024 GO_REF:0000107 NCBI chr 1:78,128,325...78,135,931
Ensembl chr 1:69,099,539...69,107,145 		JBrowse link
G Mad2l2 mitotic arrest deficient 2 like 2 involved_in ISO (PMID:29656893) RGD PMID:29656893 NCBI chr 5:163,846,678...163,859,851
Ensembl chr 5:158,563,567...158,576,693 		JBrowse link
G Parp3 poly (ADP-ribose) polymerase family, member 3 involved_in ISO
IEA		 (PMID:24598253)
GO_REF:0000107		 RGD
Ensembl		 PMID:24598253 GO_REF:0000107 NCBI chr 8:115,989,721...115,995,822
Ensembl chr 8:107,111,012...107,116,782 		JBrowse link
G Pnkp polynucleotide kinase 3'-phosphatase involved_in ISO
IEA		 (PMID:12032095)
GO_REF:0000107		 RGD
Ensembl		 PMID:12032095 GO_REF:0000107 NCBI chr 1:104,476,801...104,483,409
Ensembl chr 1:95,341,620...95,346,920 		JBrowse link
G Prkdc protein kinase, DNA-activated, catalytic subunit involved_in ISO (PMID:26237645) RGD PMID:26237645 NCBI chr11:98,544,952...98,762,499
Ensembl chr11:85,040,792...85,257,952 		JBrowse link
G Rif1 replication timing regulatory factor 1 involved_in ISO
IEA		 (PMID:28241136)
GO_REF:0000107
(PMID:23306437), (PMID:23333305)		 RGD
Ensembl		 PMID:23306437 PMID:23333305 PMID:28241136 GO_REF:0000107 NCBI chr 3:56,963,840...57,017,106
Ensembl chr 3:36,554,697...36,603,617 		JBrowse link
G Setmar SET domain and mariner transposase fusion gene involved_in ISO (PMID:20620605), (PMID:21491884) RGD PMID:20620605 PMID:21491884 NCBI chr 4:142,602,066...142,614,208
Ensembl chr 4:141,046,069...141,058,197 		JBrowse link
G Shld1 shieldin complex subunit 1 involved_in ISO
IBA		 (PMID:29656893)
GO_REF:0000033		 RGD
GO_Central		 PMID:29656893 GO_REF:0000033 NCBI chr 3:140,391,611...140,462,273
Ensembl chr 3:119,938,833...120,009,550 		JBrowse link
G Shld2 shieldin complex subunit 2 involved_in ISO (PMID:29656893), (PMID:29789392) RGD PMID:29656893 PMID:29789392 NCBI chr16:9,554,921...9,646,186
Ensembl chr16:9,548,660...9,639,965 		JBrowse link
G Shld3 shieldin complex subunit 3 involved_in ISO
IBA
IEA		 (PMID:29656893)
GO_REF:0000033
GO_REF:0000107		 RGD
GO_Central
Ensembl		 PMID:29656893 GO_REF:0000033 GO_REF:0000107 NCBI chr 2:37,031,045...37,035,859
Ensembl chr 2:35,295,859...35,302,346 		JBrowse link
G Smchd1 structural maintenance of chromosomes flexible hinge domain containing 1 involved_in ISO
IEA		 (PMID:25294876)
GO_REF:0000107		 RGD
Ensembl		 PMID:25294876 GO_REF:0000107 NCBI chr 9:118,690,050...118,837,281
Ensembl chr 9:111,247,702...111,349,665 		JBrowse link
G Top2b DNA topoisomerase II beta IMP RGD PMID:22019940 RGD:13432143 NCBI chr15:11,482,089...11,542,464
Ensembl chr15:9,051,341...9,112,085 		JBrowse link
G Wrap53 WD repeat containing, antisense to TP53 involved_in ISS
IEA
ISO		 GO_REF:0000024
GO_REF:0000107
(PMID:25512560)		 UniProt
Ensembl
RGD		 PMID:25512560 GO_REF:0000024 GO_REF:0000107 NCBI chr10:54,780,873...54,797,919
Ensembl chr10:54,282,105...54,298,929 		JBrowse link
positive regulation of mismatch repair term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Hdac10 histone deacetylase 10 involved_in ISS
ISO		 GO_REF:0000024
(PMID:26221039)		 UniProt
RGD		 PMID:26221039 GO_REF:0000024 NCBI chr 7:122,078,768...122,084,457
Ensembl chr 7:120,199,129...120,204,228 		JBrowse link
G Hmgb1 high mobility group box 1 involved_in ISO (PMID:15014079) RGD PMID:15014079 NCBI chr12:11,009,236...11,015,941
Ensembl chr12:5,901,586...5,978,565
Ensembl chr16:5,901,586...5,978,565 		JBrowse link
G Prkcg protein kinase C, gamma involved_in ISO
IEA		 (PMID:15808853)
GO_REF:0000107		 RGD
Ensembl		 PMID:15808853 GO_REF:0000107 NCBI chr 1:74,748,272...74,777,611
Ensembl chr 1:65,832,855...65,859,384 		JBrowse link
positive regulation of single strand break repair term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G AABR07044389.1 involved_in IEA GO_REF:0000107 Ensembl GO_REF:0000107
G Parp1 poly (ADP-ribose) polymerase 1 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr13:94,839,484...94,871,295
Ensembl chr13:92,307,586...92,339,404 		JBrowse link
G Whr1 winged helix repair factor 1 involved_in ISO
IEA		 (PMID:38252411)
GO_REF:0000107		 RGD
Ensembl		 PMID:38252411 GO_REF:0000107 NCBI chr20:4,000,216...4,009,743
Ensembl chr20:3,995,587...4,005,116 		JBrowse link
postreplication repair term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Aktip AKT interacting protein involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr19:15,866,811...15,877,123
Ensembl chr19:15,866,928...15,886,663 		JBrowse link
G Brca1 BRCA1, DNA repair associated involved_in ISO (PMID:17349954) RGD PMID:17349954 NCBI chr10:86,917,693...86,978,012
Ensembl chr10:86,418,000...86,477,304 		JBrowse link
G Msh2 mutS homolog 2 involved_in
acts_upstream_of_or_within		 ISO
IEA
ISS		 (PMID:7923193)
GO_REF:0000107
MGI:1858055 (PMID:7628020)
GO_REF:0000024		 RGD
Ensembl
UniProt		 PMID:7628020 PMID:7923193 GO_REF:0000024 GO_REF:0000107 NCBI chr 6:12,567,368...12,626,534
Ensembl chr 6:6,813,795...6,872,938 		JBrowse link
G Polh DNA polymerase eta acts_upstream_of_or_within
involved_in		 ISO
IEA		 (PMID:10871396)
GO_REF:0000107
GO_REF:0000117		 RGD
Ensembl
UniProt		 PMID:10871396 GO_REF:0000107 GO_REF:0000117 NCBI chr 9:22,275,929...22,310,576
Ensembl chr 9:14,777,888...14,812,723 		JBrowse link
G Rad18 RAD18 E3 ubiquitin protein ligase involved_in IBA
IEA		 GO_REF:0000033
GO_REF:0000002		 GO_Central
InterPro		 GO_REF:0000002 GO_REF:0000033 NCBI chr 4:147,291,463...147,376,904
Ensembl chr 4:145,735,654...145,821,069 		JBrowse link
G Ube2b ubiquitin-conjugating enzyme E2B involved_in ISO
IEA		 (PMID:14981545)
GO_REF:0000107		 RGD
Ensembl		 PMID:14981545 GO_REF:0000107 NCBI chr10:36,749,365...36,764,335
Ensembl chr10:36,248,438...36,264,665 		JBrowse link
G Ube2n ubiquitin-conjugating enzyme E2N involved_in
acts_upstream_of		 IBA
ISO		 GO_REF:0000033
(PMID:17349954)		 GO_Central
RGD		 PMID:17349954 GO_REF:0000033 NCBI chr 7:32,041,190...32,071,252
Ensembl chr 7:30,154,616...30,184,355 		JBrowse link
G Ube2v1 ubiquitin conjugating enzyme E2 V1 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr 3:176,736,325...176,759,174
Ensembl chr 3:156,316,781...156,340,273 		JBrowse link
G Ube2v1-ps22 ubiquitin conjugating enzyme E2 V1, pseudogene 22 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr 9:33,633,770...33,634,238 JBrowse link
G Ube2v1l1 ubiquitin conjugating enzyme E2 V1 like 1 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr14:4,703,243...4,704,962
Ensembl chr 3:156,316,781...156,340,273 		JBrowse link
G Ube2v2 ubiquitin conjugating enzyme E2 V2 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr11:98,808,681...98,842,583
Ensembl chr11:85,304,526...85,336,369 		JBrowse link
protein-DNA covalent cross-linking repair term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Brip1 BRCA1 interacting DNA helicase 1 involved_in ISO (PMID:36608669) RGD PMID:36608669 NCBI chr10:71,402,035...71,528,083
Ensembl chr10:70,907,371...71,030,324 		JBrowse link
G Fam111a FAM111 trypsin like peptidase A involved_in ISO (PMID:32165630) RGD PMID:32165630 NCBI chr 1:219,065,542...219,081,213
Ensembl chr 1:209,640,953...209,656,547 		JBrowse link
G Hmces 5-hydroxymethylcytosine binding, ES cell specific involved_in ISS
IEA
ISO		 GO_REF:0000024
GO_REF:0000002
GO_REF:0000107
(PMID:37519246), (PMID:37950866)		 UniProt
InterPro
Ensembl
RGD		 PMID:37519246 PMID:37950866 GO_REF:0000002 GO_REF:0000024 GO_REF:0000107 NCBI chr 4:121,950,129...121,972,937
Ensembl chr 4:120,366,542...120,415,616 		JBrowse link
G Sprtn SprT-like N-terminal domain involved_in ISS
ISO
IEA		 GO_REF:0000024
(PMID:28199696)
(PMID:27852435), (PMID:27871365), (PMID:27871366), (PMID:32152270), (PMID:32649882), (PMID:36608669)
GO_REF:0000107		 UniProt
RGD
Ensembl		 PMID:27852435 PMID:27871365 PMID:27871366 PMID:28199696 PMID:32152270 More... GO_REF:0000024 GO_REF:0000107 NCBI chr19:52,857,612...52,864,864
Ensembl chr19:52,857,866...52,864,864 		JBrowse link
G Tex264 testis expressed 264 involved_in ISO
IEA
IBA		 (PMID:32152270)
GO_REF:0000107
GO_REF:0000033		 RGD
Ensembl
GO_Central		 PMID:32152270 GO_REF:0000033 GO_REF:0000107 NCBI chr 8:107,295,806...107,322,858
Ensembl chr 8:107,295,806...107,323,232 		JBrowse link
G Vcp valosin-containing protein involved_in ISO
IEA
ISS		 (PMID:32152270)
GO_REF:0000107
GO_REF:0000024		 RGD
Ensembl
UniProt		 PMID:32152270 GO_REF:0000024 GO_REF:0000107 NCBI chr 5:62,005,984...62,025,387
Ensembl chr 5:57,210,168...57,229,571 		JBrowse link
G Vcpip1 valosin containing protein interacting protein 1 involved_in ISO
IEA
IBA
ISS		 (PMID:32649882)
GO_REF:0000107
GO_REF:0000033
GO_REF:0000024		 RGD
Ensembl
GO_Central
UniProt		 PMID:32649882 GO_REF:0000024 GO_REF:0000033 GO_REF:0000107 NCBI chr 5:9,534,247...9,560,889
Ensembl chr 5:9,534,129...9,562,040 		JBrowse link
pyrimidine dimer repair term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ddb2 damage specific DNA binding protein 2 acts_upstream_of_or_within ISO
IEA		 MGI:3511965 (PMID:15558025)
GO_REF:0000107		 RGD
Ensembl		 PMID:15558025 GO_REF:0000107 NCBI chr 3:77,185,114...77,207,650
Ensembl chr 3:77,185,109...77,207,631 		JBrowse link
G Ercc6 ERCC excision repair 6, chromatin remodeling factor acts_upstream_of_or_within ISO
IEA		 MGI:1932102 (PMID:9150142)
GO_REF:0000107		 RGD
Ensembl		 PMID:9150142 GO_REF:0000107 NCBI chr16:7,771,311...7,841,895
Ensembl chr16:7,765,013...7,835,587 		JBrowse link
G Polb DNA polymerase beta IDA RGD PMID:12388548 RGD:633643 NCBI chr16:76,081,903...76,105,174
Ensembl chr16:69,379,400...69,404,812 		JBrowse link
G Polh DNA polymerase eta acts_upstream_of_or_within ISO
IEA		 (PMID:10871396)
GO_REF:0000107		 RGD
Ensembl		 PMID:10871396 GO_REF:0000107 NCBI chr 9:22,275,929...22,310,576
Ensembl chr 9:14,777,888...14,812,723 		JBrowse link
pyrimidine dimer repair by nucleotide-excision repair term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ercc1 ERCC excision repair 1, endonuclease non-catalytic subunit acts_upstream_of_or_within ISO (PMID:10454634) RGD PMID:10454634 NCBI chr 1:88,099,308...88,135,966
Ensembl chr 1:78,996,390...79,007,963 		JBrowse link
G Hmgn1 high mobility group nucleosome binding domain 1 acts_upstream_of_or_within ISO MGI:3590648 (PMID:12660172) RGD PMID:12660172 NCBI chr11:48,891,813...48,897,732
Ensembl chr11:35,422,328...35,428,254 		JBrowse link
G Sirt1 sirtuin 1 involved_in ISO
IEA		 (PMID:21149730)
GO_REF:0000107		 RGD
Ensembl		 PMID:21149730 GO_REF:0000107 NCBI chr20:25,305,953...25,328,000
Ensembl chr20:25,306,917...25,329,260 		JBrowse link
G Xpc XPC complex subunit, DNA damage recognition and repair factor acts_upstream_of_or_within ISO
IEA		 MGI:1931883 (PMID:17049932)
GO_REF:0000107		 RGD
Ensembl		 PMID:17049932 GO_REF:0000107 NCBI chr 4:125,550,833...125,578,084
Ensembl chr 4:123,993,666...124,021,010 		JBrowse link
recombinational interstrand cross-link repair term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Mcm8 minichromosome maintenance 8 homologous recombination repair factor involved_in ISO
IEA		 (PMID:23401855)
GO_REF:0000107		 RGD
Ensembl		 PMID:23401855 GO_REF:0000107 NCBI chr 3:140,539,590...140,569,891
Ensembl chr 3:120,086,763...120,117,008 		JBrowse link
G Mcm9 minichromosome maintenance 9 homologous recombination repair factor involved_in ISO
IEA		 (PMID:23401855)
GO_REF:0000107		 RGD
Ensembl		 PMID:23401855 GO_REF:0000107 NCBI chr20:32,818,219...32,929,577
Ensembl chr20:32,844,951...32,929,600 		JBrowse link
recombinational repair term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Hrob homologous recombination factor with OB-fold involved_in IEA GO_REF:0000002 InterPro GO_REF:0000002 NCBI chr10:87,206,017...87,222,483
Ensembl chr10:87,206,049...87,222,483 		JBrowse link
G Rhno1 RAD9-HUS1-RAD1 interacting nuclear orphan 1 involved_in ISO
IBA		 (PMID:21659603)
GO_REF:0000033		 RGD
GO_Central		 PMID:21659603 GO_REF:0000033 NCBI chr 4:163,320,141...163,325,527
Ensembl chr 4:161,634,048...161,639,371 		JBrowse link
G Zgrf1 zinc finger, GRF-type containing 1 involved_in ISO (PMID:32640219) RGD PMID:32640219 NCBI chr 2:216,012,911...216,075,608
Ensembl chr 2:216,013,005...216,074,750 		JBrowse link
regulation of base-excision repair term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Parp1 poly (ADP-ribose) polymerase 1 involved_in ISO
IEA		 (PMID:34102106)
GO_REF:0000107		 RGD
Ensembl		 PMID:34102106 GO_REF:0000107 NCBI chr13:94,839,484...94,871,295
Ensembl chr13:92,307,586...92,339,404 		JBrowse link
G Xrcc1 X-ray repair cross complementing 1 involved_in IEA
ISO		 GO_REF:0000107
(PMID:34102106)		 Ensembl
RGD		 PMID:34102106 GO_REF:0000107 NCBI chr 1:89,268,721...89,296,619
Ensembl chr 1:80,141,207...80,168,701 		JBrowse link
regulation of DNA double-strand break processing term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Helb DNA helicase B involved_in ISO
IEA		 (PMID:26774285)
GO_REF:0000107		 RGD
Ensembl		 PMID:26774285 GO_REF:0000107 NCBI chr 7:57,474,115...57,502,221
Ensembl chr 7:55,588,798...55,615,585 		JBrowse link
regulation of DNA repair term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Actl6a actin-like 6A involved_in ISO
IEA		 (PMID:23979016)
GO_REF:0000107		 RGD
Ensembl		 PMID:23979016 GO_REF:0000107 NCBI chr 2:117,413,206...117,436,758
Ensembl chr 2:115,492,285...115,508,401 		JBrowse link
G Actr5 actin related protein 5 involved_in ISO (PMID:23979016) RGD PMID:23979016 NCBI chr 3:167,702,299...167,715,736
Ensembl chr 3:147,282,624...147,296,110 		JBrowse link
G Actr8 actin related protein 8 involved_in ISO (PMID:23979016) RGD PMID:23979016 NCBI chr16:5,170,649...5,192,883
Ensembl chr16:5,164,129...5,178,577 		JBrowse link
G C8h11orf54 similar to human chromosome 11 open reading frame 54 involved_in ISS
ISO
IEA		 GO_REF:0000024
(PMID:37277441)
GO_REF:0000107		 UniProt
RGD
Ensembl		 PMID:37277441 GO_REF:0000024 GO_REF:0000107 NCBI chr 8:20,405,240...20,427,811
Ensembl chr 8:12,123,823...12,146,473 		JBrowse link
G Cdk9 cyclin-dependent kinase 9 involved_in ISO
IEA		 (PMID:20493174)
GO_REF:0000107		 RGD
Ensembl		 PMID:20493174 GO_REF:0000107 NCBI chr 3:36,394,168...36,399,016
Ensembl chr 3:15,996,468...16,002,410 		JBrowse link
G Ier3 immediate early response 3 acts_upstream_of_or_within ISO
IEA		 MGI:3773690 (PMID:20467439)
GO_REF:0000107		 RGD
Ensembl		 PMID:20467439 GO_REF:0000107 NCBI chr20:2,933,173...2,934,377
Ensembl chr20:2,928,378...2,929,583 		JBrowse link
G Ino80 INO80 complex ATPase subunit involved_in ISO
IEA		 (PMID:23979016)
GO_REF:0000107		 RGD
Ensembl		 PMID:23979016 GO_REF:0000107 NCBI chr 3:126,822,280...126,919,532
Ensembl chr 3:106,368,455...106,467,911 		JBrowse link
G Ino80b INO80 complex subunit B involved_in ISO (PMID:23979016) RGD PMID:23979016 NCBI chr 4:117,185,427...117,188,930
Ensembl chr 4:115,627,908...115,631,456 		JBrowse link
G Ino80c INO80 complex subunit C involved_in ISO
IEA		 (PMID:23979016)
GO_REF:0000107		 RGD
Ensembl		 PMID:23979016 GO_REF:0000107 NCBI chr18:15,653,508...15,752,455
Ensembl chr18:15,378,770...15,393,403 		JBrowse link
G Ino80d INO80 complex subunit D involved_in ISO
IEA		 (PMID:23979016)
GO_REF:0000107		 RGD
Ensembl		 PMID:23979016 GO_REF:0000107 NCBI chr 9:71,940,941...72,007,879
Ensembl chr 9:64,457,165...64,515,242 		JBrowse link
G Mcrs1 microspherule protein 1 involved_in ISO
IEA		 (PMID:23979016)
GO_REF:0000107		 RGD
Ensembl		 PMID:23979016 GO_REF:0000107 NCBI chr 7:132,262,719...132,271,533
Ensembl chr 7:130,383,853...130,392,685 		JBrowse link
G Nfrkb nuclear factor related to kappa B binding protein involved_in ISO
IEA		 (PMID:23979016)
GO_REF:0000107		 RGD
Ensembl		 PMID:23979016 GO_REF:0000107 NCBI chr 8:38,089,574...38,121,506
Ensembl chr 8:29,831,812...29,863,359 		JBrowse link
G Parg poly (ADP-ribose) glycohydrolase involved_in IEA
IBA		 GO_REF:0000002
GO_REF:0000033		 InterPro
GO_Central		 GO_REF:0000002 GO_REF:0000033 NCBI chr16:7,442,696...7,550,585
Ensembl chr16:7,436,476...7,544,273 		JBrowse link
G Radx RPA1 related single stranded DNA binding protein, X-linked involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr  X:107,877,835...107,965,476
Ensembl chr  X:103,089,284...103,176,838 		JBrowse link
G Riox1 ribosomal oxygenase 1 involved_in ISO (PMID:35210392) RGD PMID:35210392 NCBI chr 6:109,310,748...109,313,365
Ensembl chr 6:103,579,642...103,582,250 		JBrowse link
G Ruvbl1 RuvB-like AAA ATPase 1 involved_in ISO (PMID:23979016) RGD PMID:23979016 NCBI chr 4:122,489,754...122,524,666
Ensembl chr 4:120,932,417...121,029,384 		JBrowse link
G Ruvbl2 RuvB-like AAA ATPase 2 involved_in ISO
IEA		 (PMID:23979016)
GO_REF:0000107		 RGD
Ensembl		 PMID:23979016 GO_REF:0000107 NCBI chr 1:105,038,487...105,051,851
Ensembl chr 1:95,901,701...95,915,342 		JBrowse link
G Setd7 SET domain containing 7, histone lysine methyltransferase involved_in ISO
IEA		 (PMID:35210392)
GO_REF:0000107		 RGD
Ensembl		 PMID:35210392 GO_REF:0000107 NCBI chr 2:137,713,545...137,756,319
Ensembl chr 2:135,562,683...135,605,468 		JBrowse link
G Sgf29 SAGA complex associated factor 29 involved_in IEA
ISO		 GO_REF:0000107
(PMID:35210392)		 Ensembl
RGD		 PMID:35210392 GO_REF:0000107 NCBI chr 1:190,668,803...190,702,500
Ensembl chr 1:181,238,468...181,274,781 		JBrowse link
G Sirt7 sirtuin 7 involved_in ISO (PMID:30944854) RGD PMID:30944854 NCBI chr10:106,394,802...106,401,627
Ensembl chr10:105,896,476...105,903,172 		JBrowse link
G Suv39h1 SUV39H1 histone lysine methyltransferase acts_upstream_of_or_within ISO MGI:2445449 (PMID:23695662) RGD PMID:23695662 NCBI chr  X:17,093,059...17,105,942
Ensembl chr  X:14,421,109...14,433,982 		JBrowse link
G Suv39h1-ps1 SUV39H1 histone lysine methyltransferase, pseudogene 1 acts_upstream_of_or_within ISO MGI:2445449 (PMID:23695662) RGD PMID:23695662 NCBI chr  X:146,828,818...146,831,485 JBrowse link
G Tfpt TCF3 fusion partner involved_in ISO
IEA		 (PMID:23979016)
GO_REF:0000107		 RGD
Ensembl		 PMID:23979016 GO_REF:0000107 NCBI chr 1:74,502,994...74,512,766
Ensembl chr 1:65,582,359...65,611,689 		JBrowse link
G Uchl5 ubiquitin C-terminal hydrolase L5 involved_in ISO (PMID:23979016) RGD PMID:23979016 NCBI chr13:58,070,947...58,106,825
Ensembl chr13:55,520,729...55,556,502 		JBrowse link
G Usp1 ubiquitin specific peptidase 1 involved_in ISO
IEA
ISS		 (PMID:18082604)
GO_REF:0000002
GO_REF:0000107
GO_REF:0000024		 RGD
InterPro
Ensembl
UniProt		 PMID:18082604 GO_REF:0000002 GO_REF:0000024 GO_REF:0000107 NCBI chr 5:118,703,056...118,714,426
Ensembl chr 5:113,587,564...113,598,932 		JBrowse link
G Yy1 YY1 transcription factor involved_in ISO
IEA		 (PMID:23979016)
GO_REF:0000107		 RGD
Ensembl		 PMID:23979016 GO_REF:0000107 NCBI chr 6:133,471,615...133,500,875
Ensembl chr 6:127,707,596...127,732,747 		JBrowse link
regulation of double-strand break repair term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Dek DEK proto-oncogene acts_upstream_of_or_within
involved_in		 ISO
IEA
IBA		 (PMID:21653549)
GO_REF:0000107
GO_REF:0000033		 RGD
Ensembl
GO_Central		 PMID:21653549 GO_REF:0000033 GO_REF:0000107 NCBI chr17:17,786,989...17,809,096
Ensembl chr17:17,580,843...17,602,808 		JBrowse link
G Pml PML nuclear body scaffold involved_in ISO
IEA		 (PMID:21639834)
GO_REF:0000107		 RGD
Ensembl		 PMID:21639834 GO_REF:0000107 NCBI chr 8:67,523,164...67,557,801
Ensembl chr 8:58,628,837...58,658,971 		JBrowse link
G Ppp4c protein phosphatase 4, catalytic subunit involved_in ISO
IEA		 (PMID:18614045)
GO_REF:0000107		 RGD
Ensembl		 PMID:18614045 GO_REF:0000107 NCBI chr 1:190,823,447...190,830,247
Ensembl chr 1:181,392,923...181,399,659 		JBrowse link
G Ppp4r2 protein phosphatase 4, regulatory subunit 2 involved_in ISO (PMID:18614045) RGD PMID:18614045 NCBI chr 4:135,010,919...135,051,844
Ensembl chr 4:133,454,555...133,495,486 		JBrowse link
G Ppp4r3a protein phosphatase 4, regulatory subunit 3A involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr 6:126,032,068...126,098,329
Ensembl chr 6:120,302,511...120,365,891 		JBrowse link
G Ppp4r3b protein phosphatase 4, regulatory subunit 3B involved_in ISO
IEA
IBA		 (PMID:18614045)
GO_REF:0000107
GO_REF:0000033		 RGD
Ensembl
GO_Central		 PMID:18614045 GO_REF:0000033 GO_REF:0000107 NCBI chr14:107,118,116...107,166,121
Ensembl chr14:102,917,443...103,068,192 		JBrowse link
G Ppp4r3cl1 protein phosphatase 4 regulatory subunit 3C like 1 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr  X:60,371,701...60,375,055
Ensembl chr  X:56,396,804...56,399,326 		JBrowse link
G Ppp4r3cl2 protein phosphatase 4 regulatory subunit 3C like 2 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr  X:58,752,523...58,860,206
Ensembl chr  X:54,782,268...54,889,921 		JBrowse link
G Ppp4r3cl3 protein phosphatase 4 regulatory subunit 3C like 3 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr  X:58,979,369...58,982,372
Ensembl chr  X:55,009,467...55,012,137 		JBrowse link
regulation of double-strand break repair via homologous recombination term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Chek1 checkpoint kinase 1 involved_in ISS
ISO		 GO_REF:0000024
(PMID:15665856)		 UniProt
RGD		 PMID:15665856 GO_REF:0000024 NCBI chr 8:44,609,417...44,629,867
Ensembl chr 8:36,420,569...36,441,009 		JBrowse link
G Fignl1 fidgetin-like 1 involved_in ISO
ISS		 (PMID:23754376)
GO_REF:0000024		 RGD
UniProt		 PMID:23754376 GO_REF:0000024 NCBI chr14:90,573,090...90,595,342
Ensembl chr14:86,368,675...86,377,455 		JBrowse link
G Kdm1a lysine demethylase 1A acts_upstream_of_or_within ISO
IEA		 (PMID:24217620)
GO_REF:0000107		 RGD
Ensembl		 PMID:24217620 GO_REF:0000107 NCBI chr 5:154,066,436...154,121,913
Ensembl chr 5:148,782,976...148,838,319 		JBrowse link
G Ppp4c protein phosphatase 4, catalytic subunit involved_in IEA
ISS
ISO		 GO_REF:0000107
GO_REF:0000024
(PMID:20154705)		 Ensembl
UniProt
RGD		 PMID:20154705 GO_REF:0000024 GO_REF:0000107 NCBI chr 1:190,823,447...190,830,247
Ensembl chr 1:181,392,923...181,399,659 		JBrowse link
G Ppp4r2 protein phosphatase 4, regulatory subunit 2 involved_in ISO (PMID:20154705) RGD PMID:20154705 NCBI chr 4:135,010,919...135,051,844
Ensembl chr 4:133,454,555...133,495,486 		JBrowse link
G Rad51 RAD51 recombinase involved_in ISO
IEA		 (PMID:23754376)
GO_REF:0000107		 RGD
Ensembl		 PMID:23754376 GO_REF:0000107 NCBI chr 3:126,554,210...126,578,888
Ensembl chr 3:106,100,381...106,125,035 		JBrowse link
G Rad51ap1 RAD51 associated protein 1 involved_in ISO
IEA		 (PMID:23754376)
GO_REF:0000107		 RGD
Ensembl		 PMID:23754376 GO_REF:0000107 NCBI chr 4:161,445,610...161,458,661
Ensembl chr 4:159,759,459...159,772,524 		JBrowse link
G Rpa2 replication protein A2 involved_in ISO
ISS		 (PMID:20154705)
GO_REF:0000024		 RGD
UniProt		 PMID:20154705 GO_REF:0000024 NCBI chr 5:150,260,668...150,271,329
Ensembl chr 5:144,976,748...144,987,350 		JBrowse link
G Rtel1 regulator of telomere elongation helicase 1 involved_in ISS
IEA
IBA
ISO		 GO_REF:0000024
GO_REF:0000107
GO_REF:0000033
GO_REF:0000104
(PMID:18957201)		 UniProt
Ensembl
GO_Central
RGD		 PMID:18957201 GO_REF:0000024 GO_REF:0000033 GO_REF:0000104 GO_REF:0000107 NCBI chr 3:188,778,329...188,842,877
Ensembl chr 3:168,419,579...168,465,348 		JBrowse link
G Setd2 SET domain containing 2, histone lysine methyltransferase involved_in ISO
IEA		 (PMID:24843002)
GO_REF:0000107		 RGD
Ensembl		 PMID:24843002 GO_REF:0000107 NCBI chr 8:119,390,207...119,475,863
Ensembl chr 8:110,511,772...110,597,489 		JBrowse link
G Shld2 shieldin complex subunit 2 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr16:9,554,921...9,646,186
Ensembl chr16:9,548,660...9,639,965 		JBrowse link
G Shld3 shieldin complex subunit 3 involved_in IEA GO_REF:0000002 InterPro GO_REF:0000002 NCBI chr 2:37,031,045...37,035,859
Ensembl chr 2:35,295,859...35,302,346 		JBrowse link
G Sirt6 sirtuin 6 involved_in ISO (PMID:19135889), (PMID:22753495) RGD PMID:19135889 PMID:22753495 NCBI chr 7:8,733,056...8,738,543
Ensembl chr 7:8,082,364...8,098,914 		JBrowse link
G Spidr scaffold protein involved in DNA repair involved_in ISO (PMID:23754376) RGD PMID:23754376 NCBI chr11:98,270,779...98,511,760
Ensembl chr11:84,766,593...85,007,600 		JBrowse link
G Terf2ip TERF2 interacting protein involved_in ISS
IEA
ISO		 GO_REF:0000024
GO_REF:0000107
(PMID:20339076)		 UniProt
Ensembl
RGD		 PMID:20339076 GO_REF:0000024 GO_REF:0000107 NCBI chr19:56,886,211...56,893,300
Ensembl chr19:39,976,906...39,984,064 		JBrowse link
G Tex15 testis expressed 15, meiosis and synapsis associated involved_in
acts_upstream_of_or_within		 IBA
IEA
ISO		 GO_REF:0000033
GO_REF:0000002
MGI:3526165 (PMID:18283110)		 GO_Central
InterPro
RGD		 PMID:18283110 GO_REF:0000002 GO_REF:0000033 NCBI chr16:65,302,049...65,362,065
Ensembl chr16:58,598,989...58,658,467 		JBrowse link
G Usp51 ubiquitin specific peptidase 51 involved_in ISO (PMID:27083998) RGD PMID:27083998 NCBI chr  X:21,750,630...21,757,163
Ensembl chr  X:18,376,930...18,379,888 		JBrowse link
G Zfp365 zinc finger protein 365 involved_in ISS
IBA
IEA		 GO_REF:0000024
GO_REF:0000033
GO_REF:0000107		 UniProt
GO_Central
Ensembl		 GO_REF:0000024 GO_REF:0000033 GO_REF:0000107 NCBI chr20:20,665,122...20,688,607
Ensembl chr20:20,666,240...20,691,238 		JBrowse link
regulation of double-strand break repair via nonhomologous end joining term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Actr2 actin related protein 2 NOT|involved_in ISS
ISO		 GO_REF:0000024
(PMID:29925947)		 UniProt
RGD		 PMID:29925947 GO_REF:0000024 NCBI chr14:98,500,119...98,535,092
Ensembl chr14:94,296,443...94,340,524 		JBrowse link
G Dek DEK proto-oncogene acts_upstream_of_or_within ISO
IEA		 MGI:3838711 (PMID:21653549)
GO_REF:0000107		 RGD
Ensembl		 PMID:21653549 GO_REF:0000107 NCBI chr17:17,786,989...17,809,096
Ensembl chr17:17,580,843...17,602,808 		JBrowse link
G Mrnip MRN complex interacting protein involved_in ISO (PMID:27568553) RGD PMID:27568553 NCBI chr10:35,002,440...35,026,555
Ensembl chr10:34,501,384...34,525,469 		JBrowse link
G Nsd2 nuclear receptor binding SET domain protein 2 acts_upstream_of_or_within ISO
IEA		 (PMID:23241889)
GO_REF:0000107		 RGD
Ensembl		 PMID:23241889 GO_REF:0000107 NCBI chr14:81,057,727...81,135,866
Ensembl chr14:76,835,637...76,913,641 		JBrowse link
G Pot1 protection of telomeres 1 involved_in ISO (PMID:29227966) RGD PMID:29227966 NCBI chr 4:55,170,821...55,228,588
Ensembl chr 4:54,205,332...54,263,042 		JBrowse link
G Shld1 shieldin complex subunit 1 involved_in IEA GO_REF:0000002 InterPro GO_REF:0000002 NCBI chr 3:140,391,611...140,462,273
Ensembl chr 3:119,938,833...120,009,550 		JBrowse link
G Usp51 ubiquitin specific peptidase 51 involved_in ISO (PMID:27083998) RGD PMID:27083998 NCBI chr  X:21,750,630...21,757,163
Ensembl chr  X:18,376,930...18,379,888 		JBrowse link
G Was WASP actin nucleation promoting factor NOT|involved_in ISO (PMID:29925947) RGD PMID:29925947 NCBI chr  X:17,077,057...17,085,802
Ensembl chr  X:14,405,124...14,413,849 		JBrowse link
regulation of mismatch repair term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Axin2 axin 2 involved_in ISO
IEA		 (PMID:11017067)
GO_REF:0000107		 RGD
Ensembl		 PMID:11017067 GO_REF:0000107 NCBI chr10:94,393,379...94,426,579
Ensembl chr10:93,899,245...93,926,231 		JBrowse link
regulation of nucleotide-excision repair term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Cul4a cullin 4A acts_upstream_of_or_within ISO
IEA		 MGI:3851025 (PMID:19481525)
GO_REF:0000107		 RGD
Ensembl		 PMID:19481525 GO_REF:0000107 NCBI chr16:83,086,688...83,124,503
Ensembl chr16:76,384,546...76,422,330 		JBrowse link
G Hmgb1 high mobility group box 1 involved_in ISO (PMID:18650382) RGD PMID:18650382 NCBI chr12:11,009,236...11,015,941
Ensembl chr12:5,901,586...5,978,565
Ensembl chr16:5,901,586...5,978,565 		JBrowse link
G Kat7 lysine acetyltransferase 7 involved_in ISO
IEA
ISS		 (PMID:28719581)
GO_REF:0000107
GO_REF:0000024		 RGD
Ensembl
UniProt		 PMID:28719581 GO_REF:0000024 GO_REF:0000107 NCBI chr10:80,718,335...80,752,387
Ensembl chr10:80,221,524...80,255,567 		JBrowse link
G Rad52 RAD52 homolog, DNA repair protein acts_upstream_of_or_within ISO
IEA		 (PMID:19506022)
GO_REF:0000107		 RGD
Ensembl		 PMID:19506022 GO_REF:0000107 NCBI chr 4:154,778,320...154,802,002
Ensembl chr 4:153,106,062...153,128,207 		JBrowse link
regulation of single strand break repair term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Parp1 poly (ADP-ribose) polymerase 1 acts_upstream_of_or_within ISO (PMID:25378300) RGD PMID:25378300 NCBI chr13:94,839,484...94,871,295
Ensembl chr13:92,307,586...92,339,404 		JBrowse link
regulation of transcription-coupled nucleotide-excision repair term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ercc8 ERCC excision repair 8, CSA ubiquitin ligase complex subunit involved_in ISO
IEA		 (PMID:17297471)
GO_REF:0000107		 RGD
Ensembl		 PMID:17297471 GO_REF:0000107 NCBI chr 2:41,380,901...41,418,294
Ensembl chr 2:39,647,452...39,684,859 		JBrowse link
replication-born double-strand break repair via sister chromatid exchange term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Blm BLM RecQ like helicase acts_upstream_of_or_within ISO (PMID:25597246) RGD PMID:25597246 NCBI chr 1:143,819,072...143,905,300
Ensembl chr 1:134,409,857...134,484,312 		JBrowse link
G Fancb FA complementation group B involved_in
acts_upstream_of_or_within		 IBA
ISO		 GO_REF:0000033
(PMID:25520194)		 GO_Central
RGD		 PMID:25520194 GO_REF:0000033 NCBI chr  X:33,035,387...33,051,993
Ensembl chr  X:29,403,771...29,420,192 		JBrowse link
G Nipbl NIPBL, cohesin loading factor involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr 2:59,126,676...59,314,841
Ensembl chr 2:57,399,445...57,565,899 		JBrowse link
G Rad21 RAD21 cohesin complex component involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr 7:85,177,715...85,204,657
Ensembl chr 7:83,287,870...83,314,817 		JBrowse link
G Rad21l1 RAD21 cohesin complex component like 1 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr 3:160,620,500...160,648,716
Ensembl chr 3:140,160,118...140,188,298 		JBrowse link
G Rad51 RAD51 recombinase acts_upstream_of_or_within ISO
IEA		 MGI:5444025|MGI:5444027 (PMID:22778135)
GO_REF:0000107		 RGD
Ensembl		 PMID:22778135 GO_REF:0000107 NCBI chr 3:126,554,210...126,578,888
Ensembl chr 3:106,100,381...106,125,035 		JBrowse link
G Recql5 RecQ like helicase 5 acts_upstream_of_or_within ISO (PMID:25520194) RGD PMID:25520194 NCBI chr10:101,625,477...101,664,582
Ensembl chr10:101,126,547...101,165,652 		JBrowse link
single strand break repair term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Aplf aprataxin and PNKP like factor involved_in ISO (PMID:17396150) RGD PMID:17396150 NCBI chr 4:121,627,800...121,679,980
Ensembl chr 4:120,070,471...120,122,633 		JBrowse link
G Aptx aprataxin involved_in ISO
IEA
IBA		 (PMID:14755728)
GO_REF:0000107
(PMID:16964241)
GO_REF:0000033
(PMID:15044383), (PMID:17519253)		 RGD
Ensembl
GO_Central		 PMID:14755728 PMID:15044383 PMID:16964241 PMID:17519253 GO_REF:0000033 GO_REF:0000107 NCBI chr 5:55,798,896...55,822,963
Ensembl chr 5:55,800,248...55,822,855 		JBrowse link
G Ercc6 ERCC excision repair 6, chromatin remodeling factor involved_in ISO
IEA		 (PMID:29545921)
GO_REF:0000107		 RGD
Ensembl		 PMID:29545921 GO_REF:0000107 NCBI chr16:7,771,311...7,841,895
Ensembl chr16:7,765,013...7,835,587 		JBrowse link
G Ercc8 ERCC excision repair 8, CSA ubiquitin ligase complex subunit involved_in ISO
IEA		 (PMID:29545921)
GO_REF:0000107		 RGD
Ensembl		 PMID:29545921 GO_REF:0000107 NCBI chr 2:41,380,901...41,418,294
Ensembl chr 2:39,647,452...39,684,859 		JBrowse link
G Lig4 DNA ligase 4 involved_in ISO (PMID:8798671) RGD PMID:8798671 NCBI chr16:86,220,345...86,228,930
Ensembl chr16:79,518,312...79,527,040 		JBrowse link
G Neil3 nei-like DNA glycosylase 3 involved_in ISO
IEA		 (PMID:19170771)
GO_REF:0000107		 RGD
Ensembl		 PMID:19170771 GO_REF:0000107 NCBI chr16:45,091,401...45,151,419
Ensembl chr16:38,359,371...38,418,527 		JBrowse link
G Sirt1 sirtuin 1 involved_in ISO
IEA		 (PMID:20097625)
GO_REF:0000107		 RGD
Ensembl		 PMID:20097625 GO_REF:0000107 NCBI chr20:25,305,953...25,328,000
Ensembl chr20:25,306,917...25,329,260 		JBrowse link
G Tdp1 tyrosyl-DNA phosphodiesterase 1 involved_in
acts_upstream_of_or_within		 ISO (PMID:15811850), (PMID:17600775)
MGI:3818340 (PMID:17914460), (PMID:17948061)		 RGD PMID:15811850 PMID:17600775 PMID:17914460 PMID:17948061 NCBI chr 6:124,892,821...124,960,646
Ensembl chr 6:119,163,166...119,231,021 		JBrowse link
G Tnp1 transition protein 1 involved_in ISS
IEA
ISO		 GO_REF:0000024
GO_REF:0000107
(PMID:12743712)		 UniProt
Ensembl
RGD		 PMID:12743712 GO_REF:0000024 GO_REF:0000107 NCBI chr 9:74,594,463...74,595,072
Ensembl chr 9:74,594,466...74,595,274 		JBrowse link
G Trpc2 transient receptor potential cation channel subfamily C member 2 involved_in IEA GO_REF:0000002 InterPro GO_REF:0000002 NCBI chr 1:156,460,009...156,473,039
Ensembl chr 1:156,440,305...156,473,073 		JBrowse link
G Xndc1 Xrcc1 N-terminal domain containing 1 involved_in IEA GO_REF:0000002 InterPro GO_REF:0000002 NCBI chr 1:156,440,284...156,460,609 JBrowse link
G Xrcc1 X-ray repair cross complementing 1 involved_in IEA
ISO		 GO_REF:0000002
GO_REF:0000107
(PMID:28002403)		 InterPro
Ensembl
RGD		 PMID:28002403 GO_REF:0000002 GO_REF:0000107 NCBI chr 1:89,268,721...89,296,619
Ensembl chr 1:80,141,207...80,168,701 		JBrowse link
telomere maintenance via base-excision repair term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Apex1 apurinic/apyrimidinic endodeoxyribonuclease 1 involved_in ISO
IEA		 (PMID:24703901)
GO_REF:0000107		 RGD
Ensembl		 PMID:24703901 GO_REF:0000107 NCBI chr15:26,618,146...26,620,330
Ensembl chr15:24,144,362...24,146,785 		JBrowse link
transcription-coupled nucleotide-excision repair term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G AABR07044389.1 involved_in IEA GO_REF:0000107 Ensembl GO_REF:0000107
G Elof1 elongation factor 1 involved_in IEA
ISO		 GO_REF:0000107
(PMID:34108662), (PMID:34108663), (PMID:38316879)		 Ensembl
RGD		 PMID:34108662 PMID:34108663 PMID:38316879 GO_REF:0000107 NCBI chr 8:20,645,336...20,650,888
Ensembl chr 8:20,645,336...20,650,579 		JBrowse link
G Ercc2 ERCC excision repair 2, TFIIH core complex helicase subunit involved_in ISO
IEA		 (PMID:8663148)
GO_REF:0000107		 RGD
Ensembl		 PMID:8663148 GO_REF:0000107 NCBI chr 1:88,161,342...88,175,102
Ensembl chr 1:79,033,326...79,047,102 		JBrowse link
G Ercc3 ERCC excision repair 3, TFIIH core complex helicase subunit involved_in ISO (PMID:8663148) RGD PMID:8663148 NCBI chr18:23,883,613...23,914,326
Ensembl chr18:23,883,580...23,914,329 		JBrowse link
G Ercc5 ERCC excision repair 5, endonuclease involved_in ISO (PMID:16246722) RGD PMID:16246722 NCBI chr 9:46,309,477...46,354,478
Ensembl chr 9:46,309,389...46,354,472 		JBrowse link
G Ercc6 ERCC excision repair 6, chromatin remodeling factor involved_in
acts_upstream_of_or_within		 IMP
ISO
IEA
IBA		 (PMID:10564257), (PMID:26620705), (PMID:32355176), (PMID:34526721), (PMID:38316879), (PMID:38600235), (PMID:9565609)
GO_REF:0000107
MGI:1932102 (PMID:12509265), (PMID:9150142)
GO_REF:0000033		 RGD
Ensembl
GO_Central		 PMID:9150142 PMID:9565609 PMID:10564257 PMID:12509265 PMID:26620705 More... GO_REF:0000033 GO_REF:0000107, RGD:126925983 NCBI chr16:7,771,311...7,841,895
Ensembl chr16:7,765,013...7,835,587 		JBrowse link
G Ercc8 ERCC excision repair 8, CSA ubiquitin ligase complex subunit acts_upstream_of_or_within
involved_in		 ISO
IEA		 (PMID:12732143)
(PMID:32142649), (PMID:32355176), (PMID:34526721), (PMID:38316879), (PMID:38600235)
GO_REF:0000107
GO_REF:0000002		 RGD
Ensembl
InterPro		 PMID:12732143 PMID:32142649 PMID:32355176 PMID:34526721 PMID:38316879 More... GO_REF:0000002 GO_REF:0000107 NCBI chr 2:41,380,901...41,418,294
Ensembl chr 2:39,647,452...39,684,859 		JBrowse link
G Hmgn1 high mobility group nucleosome binding domain 1 acts_upstream_of_or_within ISO MGI:3590648 (PMID:12660172) RGD PMID:12660172 NCBI chr11:48,891,813...48,897,732
Ensembl chr11:35,422,328...35,428,254 		JBrowse link
G Polr2i RNA polymerase II subunit I involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr 1:85,483,515...85,484,952
Ensembl chr 1:85,483,515...85,484,952 		JBrowse link
G Rbx1 ring-box 1 involved_in IEA
ISO		 GO_REF:0000107
(PMID:34526721)		 Ensembl
RGD		 PMID:34526721 GO_REF:0000107 NCBI chr 7:114,870,893...114,881,194
Ensembl chr 7:112,990,835...113,001,051 		JBrowse link
G Usp7 ubiquitin specific peptidase 7 involved_in ISS
IEA
ISO		 GO_REF:0000024
GO_REF:0000107
(PMID:22466612)		 UniProt
Ensembl
RGD		 PMID:22466612 GO_REF:0000024 GO_REF:0000107 NCBI chr10:7,335,508...7,432,018
Ensembl chr10:6,828,795...6,925,355 		JBrowse link
G Uvssa UV-stimulated scaffold protein A involved_in ISS
ISO
IBA		 GO_REF:0000024
(PMID:22466610), (PMID:22466611), (PMID:22466612), (PMID:32355176), (PMID:34526721), (PMID:38316879), (PMID:38600235)
GO_REF:0000033		 UniProt
RGD
GO_Central		 PMID:22466610 PMID:22466611 PMID:22466612 PMID:32355176 PMID:34526721 More... GO_REF:0000024 GO_REF:0000033 NCBI chr14:77,309,188...77,351,922
Ensembl chr14:77,314,056...77,351,903 		JBrowse link
G Whr1 winged helix repair factor 1 involved_in IEA GO_REF:0000107 Ensembl GO_REF:0000107 NCBI chr20:4,000,216...4,009,743
Ensembl chr20:3,995,587...4,005,116 		JBrowse link
G Xab2 XPA binding protein 2 involved_in ISO
IEA
ISS		 (PMID:10944529)
GO_REF:0000107		 RGD
Ensembl		 PMID:10944529 PMID:10944529 GO_REF:0000107, RGD:8554289 NCBI chr12:6,465,569...6,477,616
Ensembl chr12:1,667,672...1,679,692 		JBrowse link
translesion synthesis term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Dtl denticleless E3 ubiquitin protein ligase homolog involved_in ISO
IEA		 (PMID:20129063)
GO_REF:0000107		 RGD
Ensembl		 PMID:20129063 GO_REF:0000107 NCBI chr13:105,646,908...105,685,921
Ensembl chr13:103,117,186...103,154,890 		JBrowse link
G Faap20 FA core complex associated protein 20 involved_in ISO
ISS		 (PMID:22266823)
GO_REF:0000024		 RGD
UniProt		 PMID:22266823 GO_REF:0000024 NCBI chr 5:171,083,328...171,097,599
Ensembl chr 5:165,808,657...165,815,333 		JBrowse link
G Parp10 poly (ADP-ribose) polymerase family, member 10 involved_in ISO
IEA		 (PMID:24695737)
GO_REF:0000107		 RGD
Ensembl		 PMID:24695737 GO_REF:0000107 NCBI chr 7:109,829,721...109,839,054
Ensembl chr 7:107,949,043...107,958,304 		JBrowse link
G Pclaf PCNA clamp associated factor involved_in ISO
IBA
ISS		 (PMID:23000965)
GO_REF:0000033
GO_REF:0000024		 RGD
GO_Central
UniProt		 PMID:23000965 GO_REF:0000024 GO_REF:0000033 NCBI chr 8:75,311,028...75,328,108
Ensembl chr 8:66,420,587...66,432,994
Ensembl chr 8:66,420,587...66,432,994 		JBrowse link
G Pcna proliferating cell nuclear antigen involved_in ISO
IEA
IBA
ISS		 (PMID:20129063)
GO_REF:0000107
GO_REF:0000033
GO_REF:0000024		 RGD
Ensembl
GO_Central
UniProt		 PMID:20129063 GO_REF:0000024 GO_REF:0000033 GO_REF:0000107 NCBI chr 3:139,951,948...139,955,820
Ensembl chr 3:119,498,810...119,502,995 		JBrowse link
G Poli DNA polymerase iota involved_in
acts_upstream_of_or_within		 IBA
ISO		 GO_REF:0000033
MGI:3055735 (PMID:17114294)		 GO_Central
RGD		 PMID:17114294 GO_REF:0000033 NCBI chr18:64,116,774...64,134,373
Ensembl chr18:64,116,774...64,163,418 		JBrowse link
G Poln DNA polymerase nu involved_in ISO (PMID:19908865), (PMID:20102227) RGD PMID:19908865 PMID:20102227 NCBI chr14:76,579,983...76,752,460
Ensembl chr14:76,580,546...76,752,463 		JBrowse link
G Primpol primase and DNA directed polymerase involved_in ISO
IBA		 (PMID:24240614), (PMID:24267451)
GO_REF:0000033		 RGD
GO_Central		 PMID:24240614 PMID:24267451 GO_REF:0000033 NCBI chr16:45,681,252...45,715,758
Ensembl chr16:45,681,326...45,715,565 		JBrowse link
G Rev3l REV3 like, DNA directed polymerase zeta catalytic subunit involved_in IEA GO_REF:0000002 InterPro GO_REF:0000002 NCBI chr20:44,686,482...44,844,668
Ensembl chr20:43,132,363...43,290,099 		JBrowse link
G Sprtn SprT-like N-terminal domain involved_in IEA
ISS
ISO		 GO_REF:0000107
GO_REF:0000024
(PMID:22681887), (PMID:22902628), (PMID:23042605), (PMID:23042607)		 Ensembl
UniProt
RGD		 PMID:22681887 PMID:22902628 PMID:23042605 PMID:23042607 GO_REF:0000024 GO_REF:0000107 NCBI chr19:52,857,612...52,864,864
Ensembl chr19:52,857,866...52,864,864 		JBrowse link
G Vcp valosin-containing protein involved_in ISO
IEA
ISS		 (PMID:23042605)
GO_REF:0000107
GO_REF:0000024		 RGD
Ensembl
UniProt		 PMID:23042605 GO_REF:0000024 GO_REF:0000107 NCBI chr 5:62,005,984...62,025,387
Ensembl chr 5:57,210,168...57,229,571 		JBrowse link
G Zbtb1 zinc finger and BTB domain containing 1 involved_in ISO
IEA		 (PMID:24657165)
GO_REF:0000107		 RGD
Ensembl		 PMID:24657165 GO_REF:0000107 NCBI chr 6:100,832,506...100,864,019
Ensembl chr 6:95,096,387...95,118,996 		JBrowse link
UV-damage excision repair term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Actr5 actin related protein 5 involved_in ISO
IEA		 (PMID:20855601)
GO_REF:0000107		 RGD
Ensembl		 PMID:20855601 GO_REF:0000107 NCBI chr 3:167,702,299...167,715,736
Ensembl chr 3:147,282,624...147,296,110 		JBrowse link
G Cul4b cullin 4B involved_in ISO (PMID:22334663) RGD PMID:22334663 NCBI chr  X:117,287,481...117,326,688
Ensembl chr  X:117,287,484...117,326,688 		JBrowse link
G Ddb1 damage-specific DNA binding protein 1 involved_in ISO (PMID:14751237), (PMID:22334663) RGD PMID:14751237 PMID:22334663 NCBI chr 1:216,677,810...216,703,605
Ensembl chr 1:207,252,890...207,278,676 		JBrowse link
G Ddb2 damage specific DNA binding protein 2 involved_in ISO
IEA		 (PMID:14751237), (PMID:22334663)
GO_REF:0000107		 RGD
Ensembl		 PMID:14751237 PMID:22334663 GO_REF:0000107 NCBI chr 3:77,185,114...77,207,650
Ensembl chr 3:77,185,109...77,207,631 		JBrowse link
G Ercc1 ERCC excision repair 1, endonuclease non-catalytic subunit involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr 1:88,099,308...88,135,966
Ensembl chr 1:78,996,390...79,007,963 		JBrowse link
G H2ac25 H2A clustered histone 25 involved_in ISO (PMID:22334663) RGD PMID:22334663 NCBI chr10:44,233,283...44,234,835
Ensembl chr10:43,733,668...43,744,874 		JBrowse link
G Ino80 INO80 complex ATPase subunit involved_in ISO
IEA		 (PMID:20855601)
GO_REF:0000107		 RGD
Ensembl		 PMID:20855601 GO_REF:0000107 NCBI chr 3:126,822,280...126,919,532
Ensembl chr 3:106,368,455...106,467,911 		JBrowse link
G Mc1r melanocortin 1 receptor involved_in ISO
IEA		 (PMID:18292087)
GO_REF:0000107		 RGD
Ensembl		 PMID:18292087 GO_REF:0000107 NCBI chr19:68,360,950...68,363,877
Ensembl chr19:51,453,239...51,454,192 		JBrowse link
G Sirt1 sirtuin 1 involved_in ISO
IEA		 (PMID:20670893)
GO_REF:0000107		 RGD
Ensembl		 PMID:20670893 GO_REF:0000107 NCBI chr20:25,305,953...25,328,000
Ensembl chr20:25,306,917...25,329,260 		JBrowse link
G Xpa XPA, DNA damage recognition and repair factor involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr 5:65,227,281...65,275,784
Ensembl chr 5:60,431,673...60,475,726 		JBrowse link
G Xpc XPC complex subunit, DNA damage recognition and repair factor involved_in ISO
IEA		 (PMID:8077226)
GO_REF:0000107
(PMID:22431748)		 RGD
Ensembl		 PMID:8077226 PMID:22431748 GO_REF:0000107 NCBI chr 4:125,550,833...125,578,084
Ensembl chr 4:123,993,666...124,021,010 		JBrowse link
Term paths to the root
Path 1
Term Annotations click to browse term
  biological_process 20558
    response to stimulus 11067
      response to stress 4344
        cellular response to stress 2072
          DNA damage response 879
            DNA repair 557
              DNA alkylation repair 9
              DNA replication proofreading 3
              DNA synthesis involved in DNA repair + 35
              UV-damage excision repair + 14
              base-excision repair + 47
              chromosomal 5-methylcytosine DNA demethylation, oxidative deamination pathway 0
              double-strand break repair + 302
              interstrand cross-link repair + 40
              mismatch repair + 26
              mitochondrial DNA repair 9
              negative regulation of DNA repair + 38
              non-photoreactive DNA repair 0
              nucleotide-excision repair + 58
              positive regulation of DNA repair + 122
              postreplication repair + 32
              protein-DNA covalent cross-linking repair 7
              pyrimidine dimer repair + 9
              recombinational repair + 181
              regulation of DNA repair + 185
              single strand break repair + 15
              viral DNA repair 0
Path 2
Term Annotations click to browse term
  biological_process 20558
    cellular process 19550
      metabolic process 12180
        primary metabolic process 10745
          nucleobase-containing compound metabolic process 5888
            nucleic acid metabolic process 5280
              DNA metabolic process 976
                DNA repair 557
                  DNA alkylation repair 9
                  DNA replication proofreading 3
                  DNA synthesis involved in DNA repair + 35
                  UV-damage excision repair + 14
                  base-excision repair + 47
                  chromosomal 5-methylcytosine DNA demethylation, oxidative deamination pathway 0
                  double-strand break repair + 302
                  interstrand cross-link repair + 40
                  mismatch repair + 26
                  mitochondrial DNA repair 9
                  negative regulation of DNA repair + 38
                  non-photoreactive DNA repair 0
                  nucleotide-excision repair + 58
                  positive regulation of DNA repair + 122
                  postreplication repair + 32
                  protein-DNA covalent cross-linking repair 7
                  pyrimidine dimer repair + 9
                  recombinational repair + 181
                  regulation of DNA repair + 185
                  single strand break repair + 15
                  viral DNA repair 0
paths to the root