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ONTOLOGY REPORT - ANNOTATIONS

Term:DNA metabolic process
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Accession:GO:0006259 term browser browse the term
Definition:Any cellular metabolic process involving deoxyribonucleic acid. This is one of the two main types of nucleic acid, consisting of a long, unbranched macromolecule formed from one, or more commonly, two, strands of linked deoxyribonucleotides.
Synonyms:exact_synonym: DNA metabolism;   cellular DNA metabolism
 alt_id: GO:0055132


show annotations for term's descendants           Sort by:
DNA metabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Aen apoptosis enhancing nuclease involved_in IEA GO_REF:0000108 GOC GO_REF:0000108 NCBI chr 1:132,815,094...132,824,522
Ensembl chr 1:132,815,142...132,824,523 		JBrowse link
G Bivm basic, immunoglobulin-like variable motif containing involved_in IEA GO_REF:0000108 GOC GO_REF:0000108 NCBI chr 9:46,268,758...46,305,038
Ensembl chr 9:46,269,252...46,305,024 		JBrowse link
G Dntt DNA nucleotidylexotransferase involved_in
acts_upstream_of_or_within		 ISO (PMID:11473582)
(PMID:8464703)		 RGD PMID:8464703 PMID:11473582 NCBI chr 1:239,856,391...239,888,283
Ensembl chr 1:239,856,391...239,888,282 		JBrowse link
G Mki67 marker of proliferation Ki-67 IEP RGD PMID:9303485 RGD:2317713 NCBI chr 1:199,926,150...199,952,847
Ensembl chr 1:190,496,319...190,522,762 		JBrowse link
G N4bp2 NEDD4 binding protein 2 involved_in IEA GO_REF:0000108 GOC GO_REF:0000108 NCBI chr14:42,342,690...42,479,861
Ensembl chr14:42,409,510...42,483,960 		JBrowse link
G Nme1 NME/NM23 nucleoside diphosphate kinase 1 involved_in IEA GO_REF:0000108 GOC GO_REF:0000108 NCBI chr10:79,403,939...79,426,620
Ensembl chr10:78,906,083...78,916,408 		JBrowse link
G Parp1 poly (ADP-ribose) polymerase 1 acts_upstream_of_or_within ISO MGI:1857862 (PMID:11756244), (PMID:12707040) RGD PMID:11756244 PMID:12707040 NCBI chr13:94,839,484...94,871,295
Ensembl chr13:92,307,586...92,339,404 		JBrowse link
G Pld3 phospholipase D family, member 3 involved_in IEA GO_REF:0000108 GOC GO_REF:0000108 NCBI chr 1:91,949,465...91,971,834
Ensembl chr 1:82,821,875...82,844,072 		JBrowse link
G Pld4 phospholipase D family, member 4 involved_in IEA GO_REF:0000108 GOC GO_REF:0000108 NCBI chr 6:137,639,948...137,647,462
Ensembl chr 6:131,818,860...131,826,376 		JBrowse link
G Ptbp1 polypyrimidine tract binding protein 1 involved_in IEA GO_REF:0000108 GOC GO_REF:0000108 NCBI chr 7:9,842,574...9,852,332
Ensembl chr 7:9,842,574...9,852,397 		JBrowse link
G Rexo2 RNA exonuclease 2 involved_in IEA GO_REF:0000108 GOC GO_REF:0000108 NCBI chr 8:48,811,900...48,823,622
Ensembl chr 8:48,811,900...48,823,622 		JBrowse link
G Tatdn1 TatD DNase domain containing 1 involved_in IEA GO_REF:0000108 GOC GO_REF:0000108 NCBI chr 7:90,449,979...90,481,000
Ensembl chr 7:90,441,079...90,481,133 		JBrowse link
G Trex1 three prime repair exonuclease 1 involved_in ISO (PMID:11279105) RGD PMID:11279105 NCBI chr 8:109,706,613...109,707,913
Ensembl chr 8:109,706,613...109,708,796 		JBrowse link
G Trex2 three prime repair exonuclease 2 involved_in ISO (PMID:11279105) RGD PMID:11279105 NCBI chr  X:156,303,203...156,304,811
Ensembl chr  X:151,151,864...151,153,479 		JBrowse link
G Wrn WRN RecQ like helicase involved_in
acts_upstream_of_or_within		 ISO (PMID:16622405)
MGI:2156622 (PMID:11756244), (PMID:12707040)		 RGD PMID:11756244 PMID:12707040 PMID:16622405 NCBI chr16:65,466,552...65,602,951
Ensembl chr16:58,763,504...58,895,450 		JBrowse link
apoptotic DNA fragmentation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Cck cholecystokinin IDA pancreatic acinar cells RGD PMID:11964411 RGD:625521 NCBI chr 8:130,031,012...130,037,702
Ensembl chr 8:121,153,500...121,160,084 		JBrowse link
G Dffa DNA fragmentation factor subunit alpha involved_in IEA GO_REF:0000002 InterPro GO_REF:0000002 NCBI chr 5:159,540,715...159,553,639
Ensembl chr 5:159,540,715...159,553,633 		JBrowse link
G Dffb DNA fragmentation factor subunit beta involved_in
acts_upstream_of_or_within		 IDA
IBA
IEA
ISO		 GO_REF:0000033
GO_REF:0000002
(PMID:15572351)
(PMID:22253444)
GO_REF:0000107		 GO_Central
InterPro
RGD
Ensembl		 PMID:15572351 PMID:22253444 PMID:11425895 GO_REF:0000002 GO_REF:0000033 GO_REF:0000107, RGD:628524 NCBI chr 5:164,522,446...164,534,733
Ensembl chr 5:164,522,463...164,534,628 		JBrowse link
G Dicer1 dicer 1 ribonuclease III involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr 6:129,392,298...129,457,252
Ensembl chr 6:123,631,250...123,693,965 		JBrowse link
G Dnase1l3 deoxyribonuclease 1L3 acts_upstream_of_or_within
involved_in		 TAS
ISO
IBA		 (PMID:12050166)
GO_REF:0000033
(PMID:23229555)		 RGD
GO_Central		 PMID:12050166 PMID:23229555 PMID:9665719 GO_REF:0000033, RGD:728743 NCBI chr15:19,351,683...19,378,536
Ensembl chr15:16,922,335...16,948,317 		JBrowse link
G Dnase2 deoxyribonuclease 2, lysosomal involved_in IEA
IBA		 GO_REF:0000104
GO_REF:0000033		 UniProt
GO_Central		 GO_REF:0000033 GO_REF:0000104 NCBI chr19:40,149,505...40,152,225
Ensembl chr19:23,244,664...23,247,376 		JBrowse link
G Dnase2b deoxyribonuclease 2 beta involved_in IEA
IBA		 GO_REF:0000104
GO_REF:0000033		 UniProt
GO_Central		 GO_REF:0000033 GO_REF:0000104 NCBI chr 2:235,470,915...235,515,211
Ensembl chr 2:235,470,919...235,486,295 		JBrowse link
G Endog endonuclease G acts_upstream_of_or_within ISO MGI:3034030|MGI:3514265 (PMID:14663139) RGD PMID:14663139 NCBI chr 3:13,449,113...13,451,715
Ensembl chr 3:13,449,086...13,451,932 		JBrowse link
G Exog exo/endonuclease G involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr 8:119,184,974...119,204,819
Ensembl chr 8:119,185,136...119,204,672 		JBrowse link
G Foxl2 forkhead box L2 involved_in ISO (PMID:16153597) RGD PMID:16153597 NCBI chr 8:108,392,466...108,395,553
Ensembl chr 8:99,513,303...99,514,427 		JBrowse link
G Vps54 VPS54 subunit of GARP complex involved_in IEA
ISO		 GO_REF:0000107
MGI:1857091 (PMID:11403940)		 Ensembl
RGD		 PMID:11403940 GO_REF:0000107 NCBI chr14:95,378,821...95,455,871
Ensembl chr14:95,378,012...95,455,857 		JBrowse link
base-excision repair term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Apex1 apurinic/apyrimidinic endodeoxyribonuclease 1 involved_in ISO
IBA		 (PMID:8932386)
GO_REF:0000033		 RGD
GO_Central		 PMID:8932386 GO_REF:0000033 NCBI chr15:26,618,146...26,620,330
Ensembl chr15:24,144,362...24,146,785 		JBrowse link
G Apex2 apurinic/apyrimidinic endodeoxyribonuclease 2 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr  X:19,425,684...19,508,459
Ensembl chr  X:19,487,419...19,508,439 		JBrowse link
G Apex2l1 APEX nuclease (apurinic/apyrimidinic endonuclease) 2-like 1 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr14:67,166,252...67,168,138
Ensembl chr14:67,166,530...67,168,080 		JBrowse link
G Dna2 DNA replication helicase/nuclease 2 involved_in IEA
ISS		 GO_REF:0000107
GO_REF:0000024		 Ensembl
UniProt		 GO_REF:0000024 GO_REF:0000107 NCBI chr20:25,661,652...25,690,598
Ensembl chr20:25,662,055...25,716,319 		JBrowse link
G ENSRNOG00000063954 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 Ensembl chr 5:82,622,228...82,672,833 JBrowse link
G Ercc6 ERCC excision repair 6, chromatin remodeling factor involved_in ISO (PMID:9973627) RGD PMID:9973627 NCBI chr16:7,771,311...7,841,895
Ensembl chr16:7,765,013...7,835,587 		JBrowse link
G Fen1 flap structure-specific endonuclease 1 involved_in IEA GO_REF:0000104 UniProt GO_REF:0000104 NCBI chr 1:216,270,016...216,274,873
Ensembl chr 1:206,844,884...206,850,003 		JBrowse link
G Hmga1 high mobility group AT-hook 1 involved_in ISO (PMID:19465398) RGD PMID:19465398 NCBI chr20:5,612,902...5,620,596
Ensembl chr20:5,611,694...5,618,752 		JBrowse link
G Hmga2 high mobility group AT-hook 2 involved_in ISO
ISS		 (PMID:19465398)
GO_REF:0000024		 RGD
UniProt		 PMID:19465398 GO_REF:0000024 NCBI chr 7:57,762,710...57,884,555
Ensembl chr 7:55,880,112...55,994,784 		JBrowse link
G Hmgb1 high mobility group box 1 involved_in ISO (PMID:17803946) RGD PMID:17803946 NCBI chr12:11,009,236...11,015,941
Ensembl chr12:5,901,586...5,978,565
Ensembl chr16:5,901,586...5,978,565 		JBrowse link
G Huwe1 HECT, UBA and WWE domain containing E3 ubiquitin protein ligase 1 involved_in ISS
IBA
ISO		 GO_REF:0000024
GO_REF:0000033
(PMID:19713937)		 UniProt
GO_Central
RGD		 PMID:19713937 GO_REF:0000024 GO_REF:0000033 NCBI chr  X:24,350,708...24,480,798
Ensembl chr  X:20,873,795...21,001,262 		JBrowse link
G Lig1 DNA ligase 1 involved_in ISO
IEA		 (PMID:19589734)
GO_REF:0000107		 RGD
Ensembl		 PMID:19589734 GO_REF:0000107 NCBI chr 1:74,165,688...74,204,400
Ensembl chr 1:74,165,842...74,204,413 		JBrowse link
G Lig3 DNA ligase 3 involved_in ISO (PMID:19589734)
(PMID:24674627)		 RGD PMID:19589734 PMID:24674627 NCBI chr10:67,717,808...67,741,141
Ensembl chr10:67,717,812...67,798,414 		JBrowse link
G Lig4 DNA ligase 4 involved_in ISO (PMID:19589734) RGD PMID:19589734 NCBI chr16:79,518,393...79,526,956
Ensembl chr16:79,518,312...79,527,040 		JBrowse link
G Mpg N-methylpurine-DNA glycosylase involved_in
acts_upstream_of_or_within		 IBA
IEA
ISO		 GO_REF:0000033
GO_REF:0000107
MGI:2148592|MGI:2675730 (PMID:15177041), (PMID:9371767)		 GO_Central
Ensembl
RGD		 PMID:9371767 PMID:15177041 GO_REF:0000033 GO_REF:0000107 NCBI chr10:15,396,246...15,402,528
Ensembl chr10:15,395,782...15,402,520 		JBrowse link
G Mutyh mutY DNA glycosylase involved_in IEA
IBA		 GO_REF:0000104
GO_REF:0000033
GO_REF:0000002		 UniProt
GO_Central
InterPro		 GO_REF:0000002 GO_REF:0000033 GO_REF:0000104 NCBI chr 5:135,510,666...135,522,777
Ensembl chr 5:130,274,122...130,286,146 		JBrowse link
G Neil1 nei-like DNA glycosylase 1 involved_in ISO (PMID:17611195) RGD PMID:17611195 NCBI chr 8:57,550,142...57,556,884
Ensembl chr 8:57,550,147...57,556,258 		JBrowse link
G Neil2 nei-like DNA glycosylase 2 involved_in IEA GO_REF:0000002 InterPro GO_REF:0000002 NCBI chr15:37,444,676...37,454,863
Ensembl chr15:37,445,381...37,454,863 		JBrowse link
G Neil3 nei-like DNA glycosylase 3 involved_in ISO
IBA		 (PMID:23755964)
(PMID:20185759)
GO_REF:0000033		 RGD
GO_Central		 PMID:20185759 PMID:23755964 GO_REF:0000033 NCBI chr16:38,359,305...38,418,528
Ensembl chr16:38,359,371...38,418,527 		JBrowse link
G Ogg1 8-oxoguanine DNA glycosylase acts_upstream_of_or_within IDA
ISO		 MGI:2386943 (PMID:10570187), (PMID:9207108) RGD PMID:9207108 PMID:10570187 PMID:9801319 RGD:729091 NCBI chr 4:148,030,237...148,037,599
Ensembl chr 4:146,474,750...146,484,766 		JBrowse link
G Parp1 poly (ADP-ribose) polymerase 1 acts_upstream_of_or_within ISO (PMID:11948190) RGD PMID:11948190 NCBI chr13:94,839,484...94,871,295
Ensembl chr13:92,307,586...92,339,404 		JBrowse link
G Parp2 poly (ADP-ribose) polymerase 2 acts_upstream_of_or_within ISO (PMID:11948190) RGD PMID:11948190 NCBI chr15:24,034,069...24,044,340
Ensembl chr15:24,034,106...24,044,338 		JBrowse link
G Polb DNA polymerase beta involved_in TAS
IBA
ISS
ISO		 GO_REF:0000033
GO_REF:0000024
(PMID:16600869), (PMID:21362556)		 GO_Central
UniProt
RGD		 PMID:16600869 PMID:21362556 PMID:12388548 GO_REF:0000024 GO_REF:0000033, RGD:633643 NCBI chr16:69,379,438...69,402,710
Ensembl chr16:69,379,400...69,404,812 		JBrowse link
G Polg DNA polymerase gamma, catalytic subunit involved_in ISS
ISO		 GO_REF:0000024
(PMID:9770471)		 UniProt
RGD		 PMID:9770471 GO_REF:0000024 NCBI chr 1:142,792,119...142,808,933
Ensembl chr 1:133,382,766...133,398,567 		JBrowse link
G Polq DNA polymerase theta involved_in ISO (PMID:19188258) RGD PMID:19188258 NCBI chr11:77,179,190...77,281,270
Ensembl chr11:63,673,816...63,775,878 		JBrowse link
G Rpa1 replication protein A1 involved_in ISO (PMID:9765279) RGD PMID:9765279 NCBI chr10:60,148,869...60,199,970
Ensembl chr10:60,148,793...60,199,949 		JBrowse link
G Rpa2 replication protein A2 involved_in ISO
ISS		 (PMID:9765279)
GO_REF:0000024		 RGD
UniProt		 PMID:9765279 GO_REF:0000024 NCBI chr 5:144,976,789...144,989,445
Ensembl chr 5:144,976,748...144,987,350 		JBrowse link
G Rpa3 replication protein A3 involved_in ISO
IBA		 (PMID:9765279)
GO_REF:0000033		 RGD
GO_Central		 PMID:9765279 GO_REF:0000033 NCBI chr 4:36,304,649...36,307,755
Ensembl chr 4:36,304,651...36,307,709 		JBrowse link
G Rpa3l1 replication protein A3 like 1 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr12:45,908,653...45,909,063
Ensembl chr12:45,908,683...45,909,048 		JBrowse link
G Rps3 ribosomal protein S3 involved_in ISO (PMID:15518571) RGD PMID:15518571 NCBI chr 1:153,778,363...153,783,663
Ensembl chr 1:153,777,472...153,783,680 		JBrowse link
G Sirt6 sirtuin 6 involved_in ISO (PMID:16439206) RGD PMID:16439206 NCBI chr 7:8,082,312...8,087,776
Ensembl chr 7:8,082,364...8,098,914 		JBrowse link
G Slc25a16 solute carrier family 25 member 16 involved_in ISS GO_REF:0000024 UniProt GO_REF:0000024 NCBI chr20:25,691,474...25,717,558
Ensembl chr20:25,662,055...25,716,319 		JBrowse link
G Smug1 single-strand-selective monofunctional uracil-DNA glycosylase 1 involved_in ISO
IDA		 (PMID:12161446)
PMID:12718543		 RGD PMID:12161446 PMID:12718543 RGD:634191 NCBI chr 7:134,288,565...134,302,179
Ensembl chr 7:134,287,675...134,297,226 		JBrowse link
G Tdg thymine-DNA glycosylase involved_in ISO (PMID:21862836), (PMID:22327402), (PMID:22573813)
(PMID:21817016)		 RGD PMID:21817016 PMID:21862836 PMID:22327402 PMID:22573813 NCBI chr 7:22,965,388...22,990,311
Ensembl chr 7:21,077,853...21,097,567 		JBrowse link
G Ung uracil-DNA glycosylase involved_in IDA
ISO
TAS		 (PMID:12161446) RGD PMID:12161446 PMID:12167490 PMID:11292851 PMID:15297456 RGD:634481, RGD:1599704, RGD:1599703 NCBI chr12:48,145,838...48,154,789
Ensembl chr12:42,485,276...42,494,206 		JBrowse link
G Usp47 ubiquitin specific peptidase 47 involved_in ISO (PMID:21362556) RGD PMID:21362556 NCBI chr 1:166,152,104...166,235,312
Ensembl chr 1:166,152,199...166,235,312 		JBrowse link
G Wrn WRN RecQ like helicase involved_in ISO (PMID:17611195) RGD PMID:17611195 NCBI chr16:65,466,552...65,602,951
Ensembl chr16:58,763,504...58,895,450 		JBrowse link
G Xpa XPA, DNA damage recognition and repair factor involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr 5:65,227,281...65,275,784
Ensembl chr 5:60,431,673...60,475,726 		JBrowse link
G Xrcc1 X-ray repair cross complementing 1 involved_in TAS
ISO
IBA
IDA		 (PMID:19589734), (PMID:34102106), (PMID:34811483)
GO_REF:0000033		 RGD
GO_Central		 PMID:19589734 PMID:34102106 PMID:34811483 PMID:11056294 PMID:17412650 GO_REF:0000033, RGD:727220, RGD:2302580 NCBI chr 1:89,268,721...89,296,619
Ensembl chr 1:80,141,207...80,168,701 		JBrowse link
G Xrcc4 X-ray repair cross complementing 4 involved_in ISO (PMID:19589734) RGD PMID:19589734 NCBI chr 2:20,948,464...21,197,705
Ensembl chr 2:20,951,200...21,197,808 		JBrowse link
base-excision repair, AP site formation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ercc5 ERCC excision repair 5, endonuclease involved_in ISO (PMID:9927729) RGD PMID:9927729 NCBI chr 9:53,801,471...53,846,611
Ensembl chr 9:46,309,389...46,354,472 		JBrowse link
G Nthl1 nth-like DNA glycosylase 1 involved_in ISO
IBA		 (PMID:15358233), (PMID:9927729)
GO_REF:0000033		 RGD
GO_Central		 PMID:9927729 PMID:15358233 GO_REF:0000033 NCBI chr10:13,655,791...13,661,958
Ensembl chr10:13,655,785...13,661,957 		JBrowse link
G Ogg1 8-oxoguanine DNA glycosylase involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr 4:148,030,237...148,037,599
Ensembl chr 4:146,474,750...146,484,766 		JBrowse link
G Tdg thymine-DNA glycosylase involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr 7:22,965,388...22,990,311
Ensembl chr 7:21,077,853...21,097,567 		JBrowse link
base-excision repair, AP site formation via deaminated base removal term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ung uracil-DNA glycosylase involved_in ISO
IBA		 (PMID:18973764)
GO_REF:0000033		 RGD
GO_Central		 PMID:18973764 GO_REF:0000033 NCBI chr12:48,145,838...48,154,789
Ensembl chr12:42,485,276...42,494,206 		JBrowse link
base-excision repair, gap-filling term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Pcna proliferating cell nuclear antigen acts_upstream_of_or_within ISO (PMID:15177179) RGD PMID:15177179 NCBI chr 3:119,499,039...119,502,911
Ensembl chr 3:119,498,810...119,502,995 		JBrowse link
G Polb DNA polymerase beta acts_upstream_of_or_within ISO (PMID:15177179) RGD PMID:15177179 NCBI chr16:69,379,438...69,402,710
Ensembl chr16:69,379,400...69,404,812 		JBrowse link
G Pold1 DNA polymerase delta 1, catalytic subunit involved_in
acts_upstream_of_or_within		 ISO
IBA
IEA		 (PMID:10559260), (PMID:10559261)
(PMID:15177179)
GO_REF:0000033
GO_REF:0000107		 RGD
GO_Central
Ensembl		 PMID:10559260 PMID:10559261 PMID:15177179 GO_REF:0000033 GO_REF:0000107 NCBI chr 1:104,161,984...104,178,074
Ensembl chr 1:95,025,499...95,036,465 		JBrowse link
G Pole DNA polymerase epsilon, catalytic subunit involved_in ISO
IBA		 (PMID:10559260)
GO_REF:0000033		 RGD
GO_Central		 PMID:10559260 GO_REF:0000033 NCBI chr12:52,005,155...52,053,761
Ensembl chr12:46,345,420...46,393,939 		JBrowse link
G Polg DNA polymerase gamma, catalytic subunit acts_upstream_of_or_within
involved_in		 ISO
IEA		 (PMID:15177179)
GO_REF:0000107		 RGD
Ensembl		 PMID:15177179 GO_REF:0000107 NCBI chr 1:142,792,119...142,808,933
Ensembl chr 1:133,382,766...133,398,567 		JBrowse link
G Poll DNA polymerase lambda involved_in ISO
ISS		 (PMID:19806195)
GO_REF:0000024		 RGD
UniProt		 PMID:19806195 GO_REF:0000024 NCBI chr 1:244,400,202...244,408,762
Ensembl chr 1:244,400,204...244,408,662 		JBrowse link
chiasma assembly term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Brip1 BRCA1 interacting DNA helicase 1 acts_upstream_of_or_within ISO MGI:4129733 (PMID:26490168) RGD PMID:26490168 NCBI chr10:71,402,035...71,528,083
Ensembl chr10:70,907,371...71,030,324 		JBrowse link
G Ccnb1ip1 cyclin B1 interacting protein 1 acts_upstream_of_or_within
involved_in		 ISO MGI:3050548 (PMID:17784788)
(PMID:24390283)		 RGD PMID:17784788 PMID:24390283 NCBI chr15:24,014,905...24,031,357
Ensembl chr15:24,014,908...24,028,475 		JBrowse link
G Msh5 mutS homolog 5 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr20:3,779,180...3,797,996
Ensembl chr20:3,776,942...3,793,336 		JBrowse link
G Rnf212 ring finger protein 212 involved_in ISO (PMID:24390283) RGD PMID:24390283 NCBI chr14:949,397...988,377
Ensembl chr14:949,448...987,831 		JBrowse link
G Rnf212b ring finger protein 212B involved_in ISO (PMID:38865271) RGD PMID:38865271 NCBI chr15:28,274,629...28,321,093
Ensembl chr15:28,244,083...28,321,347 		JBrowse link
G Sycp1 synaptonemal complex protein 1 involved_in
acts_upstream_of_or_within		 IEA
ISO
IBA		 GO_REF:0000107
MGI:109542 (PMID:22164254)
GO_REF:0000033		 Ensembl
RGD
GO_Central		 PMID:22164254 GO_REF:0000033 GO_REF:0000107 NCBI chr 2:190,296,688...190,456,687
Ensembl chr 2:190,296,954...190,456,737 		JBrowse link
G Sycp3 synaptonemal complex protein 3 acts_upstream_of_or_within
involved_in		 ISO MGI:105931 (PMID:22164254)
(PMID:12004129)		 RGD PMID:12004129 PMID:22164254 NCBI chr 7:22,874,055...22,888,512
Ensembl chr 7:22,874,055...22,888,511 		JBrowse link
G Tex11 testis expressed 11 acts_upstream_of_or_within ISO MGI:3526163 (PMID:18316482) RGD PMID:18316482 NCBI chr  X:65,932,904...66,196,525
Ensembl chr  X:65,932,988...66,196,187 		JBrowse link
G Ube2b ubiquitin-conjugating enzyme E2B acts_upstream_of_or_within ISO MGI:2183933 (PMID:12556476) RGD PMID:12556476 NCBI chr10:36,248,434...36,263,379
Ensembl chr10:36,248,438...36,264,665 		JBrowse link
chromosomal 5-methylcytosine DNA demethylation, oxidation pathway term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Tet1 tet methylcytosine dioxygenase 1 involved_in IEA GO_REF:0000002 InterPro GO_REF:0000002 NCBI chr20:25,761,042...25,840,926
Ensembl chr20:25,768,120...25,833,052 		JBrowse link
G Tet2 tet methylcytosine dioxygenase 2 acts_upstream_of_or_within ISO MGI:5301343 (PMID:21803851) RGD PMID:21803851 NCBI chr 2:221,988,645...222,072,813
Ensembl chr 2:221,988,645...222,072,534 		JBrowse link
G Tet3 tet methylcytosine dioxygenase 3 involved_in IEA GO_REF:0000002 InterPro GO_REF:0000002 NCBI chr 4:115,867,412...115,964,433
Ensembl chr 4:115,871,265...115,964,193 		JBrowse link
DNA ADP-ribosylation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Parp1 poly (ADP-ribose) polymerase 1 involved_in ISO
ISS		 (PMID:27471034)
GO_REF:0000024		 RGD
UniProt		 PMID:27471034 GO_REF:0000024 NCBI chr13:94,839,484...94,871,295
Ensembl chr13:92,307,586...92,339,404 		JBrowse link
G Parp2 poly (ADP-ribose) polymerase 2 involved_in ISO (PMID:27471034) RGD PMID:27471034 NCBI chr15:24,034,069...24,044,340
Ensembl chr15:24,034,106...24,044,338 		JBrowse link
G Parp3 poly (ADP-ribose) polymerase family, member 3 involved_in ISO (PMID:29361132) RGD PMID:29361132 NCBI chr 8:115,989,721...115,995,822
Ensembl chr 8:107,111,012...107,116,782 		JBrowse link
DNA alkylation repair term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Alkbh2 alkB homolog 2, alpha-ketoglutarate-dependent dioxygenase involved_in ISO
IBA		 (PMID:18432238), (PMID:20714506)
(PMID:18519673)
GO_REF:0000033		 RGD
GO_Central		 PMID:18432238 PMID:18519673 PMID:20714506 GO_REF:0000033 NCBI chr12:42,494,187...42,500,929
Ensembl chr12:42,496,300...42,500,914 		JBrowse link
G Alkbh3 alkB homolog 3, alpha-ketoglutarate-dependent dioxygenase involved_in IEA
ISO		 GO_REF:0000002
(PMID:20714506), (PMID:22055184)		 InterPro
RGD		 PMID:20714506 PMID:22055184 GO_REF:0000002 NCBI chr 3:79,939,515...79,972,820
Ensembl chr 3:79,939,600...79,972,000 		JBrowse link
G Ascc1 activating signal cointegrator 1 complex subunit 1 involved_in IEA GO_REF:0000002 InterPro GO_REF:0000002 NCBI chr20:27,941,053...28,031,272
Ensembl chr20:27,941,283...28,031,272 		JBrowse link
G Ascc3 activating signal cointegrator 1 complex subunit 3 involved_in ISO
ISS		 (PMID:22055184)
GO_REF:0000024		 RGD
UniProt		 PMID:22055184 GO_REF:0000024 NCBI chr20:53,510,137...53,795,446
Ensembl chr20:53,510,184...53,790,165 		JBrowse link
G Fto FTO, alpha-ketoglutarate dependent dioxygenase involved_in IEA
ISO		 GO_REF:0000107
(PMID:18775698)		 Ensembl
RGD		 PMID:18775698 GO_REF:0000107 NCBI chr19:31,456,749...31,865,011
Ensembl chr19:15,349,696...15,692,083 		JBrowse link
G Mgmt O-6-methylguanine-DNA methyltransferase acts_upstream_of_or_within IDA
ISO		 (PMID:1554415) RGD PMID:1554415 PMID:15025514 RGD:2316914 NCBI chr 1:201,140,832...201,367,481
Ensembl chr 1:191,710,930...191,937,756 		JBrowse link
G Otud4 OTU deubiquitinase 4 involved_in ISO (PMID:25944111) RGD PMID:25944111 NCBI chr19:28,236,713...28,279,815
Ensembl chr19:28,236,713...28,279,815 		JBrowse link
G Usp7 ubiquitin specific peptidase 7 involved_in IEA
ISO
ISS		 GO_REF:0000107
(PMID:25944111)
GO_REF:0000024		 Ensembl
RGD
UniProt		 PMID:25944111 GO_REF:0000024 GO_REF:0000107 NCBI chr10:6,880,684...6,925,355
Ensembl chr10:6,828,795...6,925,355 		JBrowse link
G Usp9x ubiquitin specific peptidase 9, X-linked involved_in ISO (PMID:25944111) RGD PMID:25944111 NCBI chr  X:9,588,825...9,726,993
Ensembl chr  X:9,588,825...9,696,711 		JBrowse link
DNA biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G AABR07037878.1 involved_in IEA GO_REF:0000043 UniProt GO_REF:0000043
G AC112350.1 involved_in IEA GO_REF:0000043 UniProt GO_REF:0000043 Ensembl chr 3:109,190,742...109,191,879 JBrowse link
G Ccn2 cellular communication network factor 2 involved_in IEA GO_REF:0000043 UniProt GO_REF:0000043 NCBI chr 1:22,621,498...22,624,614
Ensembl chr 1:20,802,199...20,805,734 		JBrowse link
G Dntt DNA nucleotidylexotransferase involved_in IEA GO_REF:0000108 GOC GO_REF:0000108 NCBI chr 1:239,856,391...239,888,283
Ensembl chr 1:239,856,391...239,888,282 		JBrowse link
G ENSRNOG00000063353 involved_in IEA GO_REF:0000043 UniProt GO_REF:0000043 Ensembl chr 4:54,767,356...54,768,047 JBrowse link
G ENSRNOG00000066374 involved_in IEA GO_REF:0000043 UniProt GO_REF:0000043 Ensembl chr 6:113,779,970...113,780,861 JBrowse link
G Lig1 DNA ligase 1 involved_in IEA GO_REF:0000002 InterPro GO_REF:0000002 NCBI chr 1:74,165,688...74,204,400
Ensembl chr 1:74,165,842...74,204,413 		JBrowse link
G Lig3 DNA ligase 3 involved_in IEA GO_REF:0000002 InterPro GO_REF:0000002 NCBI chr10:67,717,808...67,741,141
Ensembl chr10:67,717,812...67,798,414 		JBrowse link
G Lig4 DNA ligase 4 involved_in IEA GO_REF:0000002 InterPro GO_REF:0000002 NCBI chr16:79,518,393...79,526,956
Ensembl chr16:79,518,312...79,527,040 		JBrowse link
G Lox lysyl oxidase acts_upstream_of_or_within ISO MGI:3610732 (PMID:19458888) RGD PMID:19458888 NCBI chr18:48,162,889...48,175,640
Ensembl chr18:45,967,343...46,041,477 		JBrowse link
G Pam16 presequence translocase associated motor 16 acts_upstream_of_or_within ISO (PMID:20719856) RGD PMID:20719856 NCBI chr10:10,942,534...10,950,654
Ensembl chr10:10,943,001...10,950,649 		JBrowse link
G Phb1 prohibitin 1 acts_upstream_of_or_within ISO (PMID:18480465) RGD PMID:18480465 NCBI chr10:81,102,043...81,114,815
Ensembl chr10:80,605,251...80,618,042 		JBrowse link
G Phb1l1 prohibitin 1 like 1 involved_in IEA GO_REF:0000043 UniProt GO_REF:0000043 NCBI chr  X:32,930,746...32,931,910
Ensembl chr  X:32,930,967...32,931,856 		JBrowse link
G Phb1l2 prohibitin 1 like 2 involved_in IEA GO_REF:0000043 UniProt GO_REF:0000043 NCBI chr19:8,695,127...8,696,208
Ensembl chr19:8,695,215...8,696,228 		JBrowse link
G Pola1 DNA polymerase alpha 1, catalytic subunit involved_in IMP
IEA		 GO_REF:0000108 GOC
RGD		 PMID:9099618 GO_REF:0000108, RGD:7247275 NCBI chr  X:58,034,617...58,348,612
Ensembl chr  X:58,034,619...58,348,536 		JBrowse link
G Pola2 DNA polymerase alpha 2, accessory subunit involved_in IEA GO_REF:0000108 GOC GO_REF:0000108 NCBI chr 1:203,227,183...203,251,350
Ensembl chr 1:203,203,388...203,251,348 		JBrowse link
G Polb DNA polymerase beta involved_in IEA GO_REF:0000043 UniProt GO_REF:0000043 NCBI chr16:69,379,438...69,402,710
Ensembl chr16:69,379,400...69,404,812 		JBrowse link
G Pold1 DNA polymerase delta 1, catalytic subunit involved_in IMP
ISO		 (PMID:11595739) RGD PMID:11595739 PMID:11959615 RGD:7247274 NCBI chr 1:104,161,984...104,178,074
Ensembl chr 1:95,025,499...95,036,465 		JBrowse link
G Pold2 DNA polymerase delta 2, accessory subunit involved_in ISO (PMID:11595739) RGD PMID:11595739 NCBI chr14:80,748,971...80,755,188
Ensembl chr14:80,748,974...80,755,160 		JBrowse link
G Pold3 DNA polymerase delta 3, accessory subunit involved_in ISO (PMID:11595739)
(PMID:11595739), (PMID:38099988)		 RGD PMID:11595739 PMID:38099988 NCBI chr 1:154,417,893...154,456,687
Ensembl chr 1:154,418,084...154,456,665 		JBrowse link
G Pole DNA polymerase epsilon, catalytic subunit IMP RGD PMID:11959615 RGD:7247274 NCBI chr12:52,005,155...52,053,761
Ensembl chr12:46,345,420...46,393,939 		JBrowse link
G Polg DNA polymerase gamma, catalytic subunit involved_in IEA GO_REF:0000108 GOC GO_REF:0000108 NCBI chr 1:142,792,119...142,808,933
Ensembl chr 1:133,382,766...133,398,567 		JBrowse link
G Polg2 DNA polymerase gamma 2, accessory subunit involved_in IEA GO_REF:0000108 GOC GO_REF:0000108 NCBI chr10:92,212,303...92,222,849
Ensembl chr10:91,712,586...91,723,008 		JBrowse link
G Poll DNA polymerase lambda involved_in ISS
IEA
ISO		 GO_REF:0000024
GO_REF:0000043
(PMID:19806195)		 UniProt
RGD		 PMID:19806195 GO_REF:0000024 GO_REF:0000043 NCBI chr 1:244,400,202...244,408,762
Ensembl chr 1:244,400,204...244,408,662 		JBrowse link
G Polm DNA polymerase mu involved_in IEA GO_REF:0000108 GOC GO_REF:0000108 NCBI chr14:80,707,075...80,716,677
Ensembl chr14:80,706,345...80,717,086 		JBrowse link
G Smpd3 sphingomyelin phosphodiesterase 3 involved_in
acts_upstream_of_or_within		 IEA
ISO		 GO_REF:0000107
(PMID:23651497)		 Ensembl
RGD		 PMID:23651497 GO_REF:0000107 NCBI chr19:34,162,337...34,245,786
Ensembl chr19:34,162,341...34,245,749 		JBrowse link
G Sphk1 sphingosine kinase 1 acts_upstream_of_or_within ISO (PMID:23651497) RGD PMID:23651497 NCBI chr10:102,257,413...102,263,086
Ensembl chr10:101,758,711...101,764,240 		JBrowse link
G Src SRC proto-oncogene, non-receptor tyrosine kinase IMP RGD PMID:9227431 RGD:150521729 NCBI chr 3:166,511,616...166,559,463
Ensembl chr 3:146,091,841...146,139,476 		JBrowse link
G Tert telomerase reverse transcriptase involved_in ISO (PMID:9398860) RGD PMID:9398860 NCBI chr 1:31,465,766...31,488,650
Ensembl chr 1:29,637,506...29,659,561 		JBrowse link
G Tk1 thymidine kinase 1 involved_in IEA GO_REF:0000043 UniProt GO_REF:0000043 NCBI chr10:103,533,449...103,544,818
Ensembl chr10:103,031,521...103,046,920 		JBrowse link
DNA catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Apex1 apurinic/apyrimidinic endodeoxyribonuclease 1 involved_in ISO
IEA		 (PMID:1627644)
GO_REF:0000107		 RGD
Ensembl		 PMID:1627644 GO_REF:0000107 NCBI chr15:26,618,146...26,620,330
Ensembl chr15:24,144,362...24,146,785 		JBrowse link
G Dffb DNA fragmentation factor subunit beta involved_in ISO (PMID:19944011) RGD PMID:19944011 NCBI chr 5:164,522,446...164,534,733
Ensembl chr 5:164,522,463...164,534,628 		JBrowse link
G Dnase1 deoxyribonuclease 1 involved_in ISS
ISO
IBA		 PMID:29191910
(PMID:29191910)
GO_REF:0000033		 RGD
GO_Central		 PMID:29191910 PMID:29191910 GO_REF:0000033, RGD:13464261 NCBI chr10:11,498,930...11,505,151
Ensembl chr10:11,498,931...11,501,869 		JBrowse link
G Dnase1l1 deoxyribonuclease 1-like 1 involved_in IEA
IBA		 GO_REF:0000002
GO_REF:0000033		 InterPro
GO_Central		 GO_REF:0000002 GO_REF:0000033 NCBI chr  X:152,056,942...152,065,518
Ensembl chr  X:152,056,942...152,065,518 		JBrowse link
G Dnase1l2 deoxyribonuclease 1 like 2 involved_in
acts_upstream_of_or_within		 IBA
ISO		 GO_REF:0000033
MGI:5308556 (PMID:21307874)		 GO_Central
RGD		 PMID:21307874 GO_REF:0000033 NCBI chr10:13,976,012...13,978,574
Ensembl chr10:13,471,479...13,473,763 		JBrowse link
G Dnase1l3 deoxyribonuclease 1L3 involved_in ISS
ISO
IEA		 PMID:29191910
(PMID:29191910)
GO_REF:0000002		 RGD
InterPro		 PMID:29191910 PMID:29191910 GO_REF:0000002, RGD:13464261 NCBI chr15:19,351,683...19,378,536
Ensembl chr15:16,922,335...16,948,317 		JBrowse link
G Dnase2 deoxyribonuclease 2, lysosomal acts_upstream_of_or_within ISO MGI:2449811 (PMID:15568025), (PMID:18991290) RGD PMID:15568025 PMID:18991290 NCBI chr19:40,149,505...40,152,225
Ensembl chr19:23,244,664...23,247,376 		JBrowse link
G Fbh1 F-box DNA helicase 1 acts_upstream_of_or_within ISO (PMID:23361013) RGD PMID:23361013 NCBI chr17:66,749,506...66,787,590
Ensembl chr17:66,749,534...66,787,590 		JBrowse link
G Isg20 interferon stimulated exonuclease gene 20 involved_in ISO
IBA		 (PMID:11401564)
GO_REF:0000033		 RGD
GO_Central		 PMID:11401564 GO_REF:0000033 NCBI chr 1:132,829,303...132,837,027
Ensembl chr 1:132,815,123...132,837,027 		JBrowse link
G Mus81 MUS81 structure-specific endonuclease subunit acts_upstream_of_or_within
involved_in		 ISO
IEA		 (PMID:23361013)
GO_REF:0000104		 RGD
UniProt		 PMID:23361013 GO_REF:0000104 NCBI chr 1:202,790,295...202,796,008
Ensembl chr 1:202,790,466...202,795,843 		JBrowse link
G Rexo4 REX4 homolog, 3'-5' exonuclease involved_in ISO
IBA		 (PMID:21602889)
GO_REF:0000033		 RGD
GO_Central		 PMID:21602889 GO_REF:0000033 NCBI chr 3:10,280,654...10,291,003
Ensembl chr 3:10,280,654...10,290,996 		JBrowse link
G Setmar SET domain and mariner transposase fusion gene involved_in ISO (PMID:20521842), (PMID:21491884), (PMID:24573677) RGD PMID:20521842 PMID:21491884 PMID:24573677 NCBI chr 4:141,046,058...141,058,183
Ensembl chr 4:141,046,069...141,058,197 		JBrowse link
G Trex1 three prime repair exonuclease 1 acts_upstream_of_or_within
involved_in		 ISO
IBA		 MGI:3052754|MGI:5751220 (PMID:18724932), (PMID:19923437), (PMID:20871604), (PMID:23993650), (PMID:25848017)
GO_REF:0000033		 RGD
GO_Central		 PMID:18724932 PMID:19923437 PMID:20871604 PMID:23993650 PMID:25848017 GO_REF:0000033 NCBI chr 8:109,706,613...109,707,913
Ensembl chr 8:109,706,613...109,708,796 		JBrowse link
G Trex2 three prime repair exonuclease 2 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr  X:156,303,203...156,304,811
Ensembl chr  X:151,151,864...151,153,479 		JBrowse link
DNA cytosine deamination term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Aicda activation-induced cytidine deaminase involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr 4:157,446,120...157,455,958
Ensembl chr 4:155,774,132...155,783,972 		JBrowse link
G Apobec1 apolipoprotein B mRNA editing enzyme catalytic subunit 1 IDA RGD PMID:12697753 RGD:1358271 NCBI chr 4:155,800,030...155,828,515
Ensembl chr 4:155,800,887...155,827,390 		JBrowse link
G Apobec3 apolipoprotein B mRNA editing enzyme catalytic subunit 3 involved_in ISO
IBA		 (PMID:16571802), (PMID:21835787)
GO_REF:0000033		 RGD
GO_Central		 PMID:16571802 PMID:21835787 GO_REF:0000033 NCBI chr 7:111,433,789...111,453,032
Ensembl chr 7:111,433,764...111,452,922 		JBrowse link
G Cdadc1 cytidine and dCMP deaminase domain containing 1 involved_in ISO (PMID:26945630) RGD PMID:26945630 NCBI chr15:33,726,590...33,755,611
Ensembl chr15:33,723,435...33,755,576 		JBrowse link
DNA deamination term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Exosc3 exosome component 3 involved_in ISO (PMID:21255825) RGD PMID:21255825 NCBI chr 5:59,573,849...59,579,065
Ensembl chr 5:59,573,886...59,579,060 		JBrowse link
G Exosc4 exosome component 4 involved_in ISO (PMID:21255825) RGD PMID:21255825 NCBI chr 7:108,047,831...108,050,573
Ensembl chr 7:108,047,831...108,050,573 		JBrowse link
G Exosc5 exosome component 5 involved_in ISO (PMID:21255825) RGD PMID:21255825 NCBI chr 1:81,168,128...81,177,266
Ensembl chr 1:81,166,023...81,177,265 		JBrowse link
G Exosc6 exosome component 6 involved_in ISO (PMID:21255825) RGD PMID:21255825 NCBI chr19:39,022,171...39,023,585
Ensembl chr19:39,022,183...39,023,515 		JBrowse link
DNA double-strand break processing term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Atm ATM serine/threonine kinase involved_in ISO (PMID:10802669), (PMID:26240375) RGD PMID:10802669 PMID:26240375 NCBI chr 8:62,724,939...62,829,040
Ensembl chr 8:53,831,093...53,932,437 		JBrowse link
G Blm BLM RecQ like helicase involved_in ISO (PMID:21325134) RGD PMID:21325134 NCBI chr 1:143,819,072...143,905,300
Ensembl chr 1:134,409,857...134,484,312 		JBrowse link
G Dna2 DNA replication helicase/nuclease 2 involved_in ISS
IEA		 GO_REF:0000024
GO_REF:0000107		 UniProt
Ensembl		 GO_REF:0000024 GO_REF:0000107 NCBI chr20:25,661,652...25,690,598
Ensembl chr20:25,662,055...25,716,319 		JBrowse link
G Exd2 exonuclease 3'-5' domain containing 2 involved_in ISO (PMID:26807646) RGD PMID:26807646 NCBI chr 6:100,116,867...100,150,452
Ensembl chr 6:100,116,867...100,150,442 		JBrowse link
G Mre11 MRE11 homolog, double strand break repair nuclease involved_in IEA
ISO		 GO_REF:0000107
(PMID:23080121)		 Ensembl
RGD		 PMID:23080121 GO_REF:0000107 NCBI chr 8:19,900,211...19,961,906
Ensembl chr 8:11,632,354...11,678,279 		JBrowse link
G Nbn nibrin involved_in IEA
ISO
ISS		 GO_REF:0000107
(PMID:16622404)
GO_REF:0000024		 Ensembl
RGD
UniProt		 PMID:16622404 GO_REF:0000024 GO_REF:0000107 NCBI chr 5:34,256,678...34,291,163
Ensembl chr 5:29,459,457...29,494,150 		JBrowse link
G Rad50 RAD50 double strand break repair protein involved_in IEA
ISO
ISS		 GO_REF:0000107
(PMID:16622404), (PMID:21757780)
GO_REF:0000024		 Ensembl
RGD
UniProt		 PMID:16622404 PMID:21757780 GO_REF:0000024 GO_REF:0000107 NCBI chr10:38,310,147...38,362,100
Ensembl chr10:37,808,726...37,861,396 		JBrowse link
G Setmar SET domain and mariner transposase fusion gene involved_in ISO (PMID:21491884) RGD PMID:21491884 NCBI chr 4:141,046,058...141,058,183
Ensembl chr 4:141,046,069...141,058,197 		JBrowse link
G Slc25a16 solute carrier family 25 member 16 involved_in ISS GO_REF:0000024 UniProt GO_REF:0000024 NCBI chr20:25,691,474...25,717,558
Ensembl chr20:25,662,055...25,716,319 		JBrowse link
G Smarcad1 SNF2 related chromatin remodeling ATPase with DExD box 1 involved_in ISO
IBA
ISS		 (PMID:22960744)
GO_REF:0000033
GO_REF:0000024		 RGD
GO_Central
UniProt		 PMID:22960744 GO_REF:0000024 GO_REF:0000033 NCBI chr 4:95,639,722...95,709,055
Ensembl chr 4:94,311,489...94,372,563 		JBrowse link
G Ube2n ubiquitin-conjugating enzyme E2N acts_upstream_of ISO (PMID:17349954) RGD PMID:17349954 NCBI chr 7:32,041,190...32,071,252
Ensembl chr 7:30,154,616...30,184,355 		JBrowse link
G Ube2v2 ubiquitin conjugating enzyme E2 V2 involved_in ISO
IEA		 (PMID:17349954)
GO_REF:0000107		 RGD
Ensembl		 PMID:17349954 GO_REF:0000107 NCBI chr11:85,304,528...85,338,430
Ensembl chr11:85,304,526...85,336,369 		JBrowse link
DNA double-strand break processing involved in repair via single-strand annealing term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Helq helicase, POLQ-like involved_in ISO (PMID:34937945) RGD PMID:34937945 NCBI chr14:8,818,582...8,862,926
Ensembl chr14:8,818,592...8,862,960 		JBrowse link
G Rad52 RAD52 homolog, DNA repair protein acts_upstream_of_or_within
involved_in		 ISO (PMID:19506022)
(PMID:22912580)		 RGD PMID:19506022 PMID:22912580 NCBI chr 4:153,106,062...153,128,598
Ensembl chr 4:153,106,062...153,128,207 		JBrowse link
G Rbbp8 RB binding protein 8, endonuclease involved_in ISO
IBA		 (PMID:18716619), (PMID:19202191)
GO_REF:0000033		 RGD
GO_Central		 PMID:18716619 PMID:19202191 GO_REF:0000033 NCBI chr18:2,922,985...2,988,851
Ensembl chr18:2,921,286...2,988,846 		JBrowse link
G Rnf138 ring finger protein 138 involved_in ISO
IEA
IBA
ISS		 (PMID:26502057)
GO_REF:0000107
GO_REF:0000033
GO_REF:0000024		 RGD
Ensembl
GO_Central
UniProt		 PMID:26502057 GO_REF:0000024 GO_REF:0000033 GO_REF:0000107 NCBI chr18:12,291,557...12,315,931
Ensembl chr18:12,291,590...12,315,930 		JBrowse link
G Rnf138l1 ring finger protein 138 like 1 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr  X:30,739,541...30,740,614
Ensembl chr  X:30,739,413...30,740,613 		JBrowse link
G Slx1b SLX1 homolog B, structure-specific endonuclease subunit involved_in ISO (PMID:19595721) RGD PMID:19595721 NCBI chr 1:181,286,190...181,291,739
Ensembl chr 1:181,283,921...181,291,775 		JBrowse link
G Slx4 SLX4 structure-specific endonuclease subunit involved_in ISO (PMID:19595721) RGD PMID:19595721 NCBI chr10:11,526,623...11,549,313
Ensembl chr10:11,528,424...11,549,295 		JBrowse link
DNA endoreduplication term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Zpr1 ZPR1 zinc finger involved_in ISO (PMID:15767679) RGD PMID:15767679 NCBI chr 8:46,564,898...46,574,719
Ensembl chr 8:46,565,146...46,574,719 		JBrowse link
DNA integration term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Banf1 barrier to autointegration nuclear assembly factor 1 acts_upstream_of_or_within ISO (PMID:9465049) RGD PMID:9465049 NCBI chr 1:202,672,170...202,674,215
Ensembl chr 1:202,671,305...202,674,188 		JBrowse link
G ENSRNOG00000065207 involved_in IEA GO_REF:0000043 UniProt GO_REF:0000043 Ensembl chr 4:104,244,335...104,246,214 JBrowse link
G ENSRNOG00000067229 involved_in IEA GO_REF:0000043 UniProt GO_REF:0000043 Ensembl chr 4:83,921,470...83,930,590 JBrowse link
G ENSRNOG00000067248 involved_in IEA GO_REF:0000043 UniProt GO_REF:0000043 Ensembl chr 9:77,055,483...77,060,879 JBrowse link
G ENSRNOG00000068406 involved_in IEA GO_REF:0000043 UniProt GO_REF:0000043 Ensembl chr 4:51,689,402...51,693,026 JBrowse link
G ENSRNOG00000069140 involved_in IEA GO_REF:0000002 InterPro GO_REF:0000002 Ensembl chr 4:12,337,547...12,343,488 JBrowse link
G ENSRNOG00000069624 involved_in IEA GO_REF:0000002 InterPro GO_REF:0000002 Ensembl chr 4:147,700,824...147,706,682 JBrowse link
G Gin1 gypsy retrotransposon integrase 1 involved_in IEA GO_REF:0000002 InterPro GO_REF:0000002 NCBI chr 9:105,740,914...105,762,357
Ensembl chr 9:98,293,597...98,315,848 		JBrowse link
G LOC134480950 igE-binding protein-like involved_in IEA GO_REF:0000002 InterPro GO_REF:0000002 Ensembl chr11:12,193,771...12,199,421 JBrowse link
G Nynrin NYN domain and retroviral integrase containing involved_in IEA GO_REF:0000002 InterPro GO_REF:0000002 NCBI chr15:29,332,873...29,355,215
Ensembl chr15:29,332,869...29,355,215 		JBrowse link
G Ormdl1 ORMDL sphingolipid biosynthesis regulator 1 involved_in IEA GO_REF:0000043 UniProt GO_REF:0000043 NCBI chr 9:48,243,365...48,253,316
Ensembl chr 9:48,237,572...48,253,211 		JBrowse link
G Setmar SET domain and mariner transposase fusion gene involved_in ISO (PMID:16332963), (PMID:24573677) RGD PMID:16332963 PMID:24573677 NCBI chr 4:141,046,058...141,058,183
Ensembl chr 4:141,046,069...141,058,197 		JBrowse link
DNA modification term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Cyp1b1 cytochrome P450, family 1, subfamily b, polypeptide 1 IMP positive regulation of DNA adduct formation RGD PMID:24025706 RGD:7829724 NCBI chr 6:21,093,927...21,103,091
Ensembl chr 6:15,342,344...15,350,917 		JBrowse link
G Dntt DNA nucleotidylexotransferase involved_in IEA GO_REF:0000043 UniProt GO_REF:0000043 NCBI chr 1:239,856,391...239,888,283
Ensembl chr 1:239,856,391...239,888,282 		JBrowse link
G Gstt1 glutathione S-transferase theta 1 IDA RGD PMID:11453994 RGD:7794854 NCBI chr20:12,856,068...12,873,020
Ensembl chr20:12,856,669...12,873,585 		JBrowse link
G Trex1 three prime repair exonuclease 1 acts_upstream_of_or_within ISO MGI:3052754 (PMID:24205360) RGD PMID:24205360 NCBI chr 8:109,706,613...109,707,913
Ensembl chr 8:109,706,613...109,708,796 		JBrowse link
DNA protection term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Cbs cystathionine beta synthase involved_in ISO (PMID:24534463) RGD PMID:24534463 NCBI chr20:9,709,394...9,733,925
Ensembl chr20:9,708,090...9,732,764 		JBrowse link
G Dctpp1 dCTP pyrophosphatase 1 involved_in ISO
IBA
ISS		 (PMID:24467396)
GO_REF:0000033
GO_REF:0000024		 RGD
GO_Central
UniProt		 PMID:24467396 GO_REF:0000024 GO_REF:0000033 NCBI chr 1:181,877,440...181,880,833
Ensembl chr 1:181,877,437...181,880,839 		JBrowse link
G Ercc6 ERCC excision repair 6, chromatin remodeling factor IMP RGD PMID:31644904 RGD:126925983 NCBI chr16:7,771,311...7,841,895
Ensembl chr16:7,765,013...7,835,587 		JBrowse link
G Nudt1 nudix hydrolase 1 involved_in ISO
IBA
ISS		 (PMID:10608900)
GO_REF:0000033
GO_REF:0000024		 RGD
GO_Central
UniProt		 PMID:10608900 GO_REF:0000024 GO_REF:0000033 NCBI chr12:14,302,514...14,309,559
Ensembl chr12:14,302,694...14,305,826 		JBrowse link
G Nudt15 nudix hydrolase 15 NOT|involved_in ISO (PMID:26238318)
(PMID:26878724)		 RGD PMID:26238318 PMID:26878724 NCBI chr15:48,707,776...48,713,847
Ensembl chr15:48,709,700...48,747,363 		JBrowse link
DNA recombinase assembly term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Dmc1 DNA meiotic recombinase 1 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr 7:111,124,888...111,167,465
Ensembl chr 7:111,124,888...111,167,952 		JBrowse link
G Rad51 RAD51 recombinase involved_in ISO (PMID:26681308) RGD PMID:26681308 NCBI chr 3:126,554,210...126,578,888
Ensembl chr 3:106,100,381...106,125,035 		JBrowse link
G Rad52 RAD52 homolog, DNA repair protein involved_in IEA GO_REF:0000002 InterPro GO_REF:0000002 NCBI chr 4:153,106,062...153,128,598
Ensembl chr 4:153,106,062...153,128,207 		JBrowse link
DNA recombination term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G AABR07035218.1 involved_in IEA GO_REF:0000043 UniProt GO_REF:0000043 Ensembl chr12:5,901,586...5,978,565 JBrowse link
G Apex1 apurinic/apyrimidinic endodeoxyribonuclease 1 involved_in IEA GO_REF:0000043 UniProt GO_REF:0000043 NCBI chr15:26,618,146...26,620,330
Ensembl chr15:24,144,362...24,146,785 		JBrowse link
G Apex2 apurinic/apyrimidinic endodeoxyribonuclease 2 involved_in IEA GO_REF:0000043 UniProt GO_REF:0000043 NCBI chr  X:19,425,684...19,508,459
Ensembl chr  X:19,487,419...19,508,439 		JBrowse link
G Apex2l1 APEX nuclease (apurinic/apyrimidinic endonuclease) 2-like 1 involved_in IEA GO_REF:0000043 UniProt GO_REF:0000043 NCBI chr14:67,166,252...67,168,138
Ensembl chr14:67,166,530...67,168,080 		JBrowse link
G Brca1 BRCA1, DNA repair associated involved_in IEA GO_REF:0000043 UniProt GO_REF:0000043 NCBI chr10:86,917,693...86,978,012
Ensembl chr10:86,418,000...86,477,304 		JBrowse link
G Brca2 BRCA2, DNA repair associated IDA RGD PMID:12228710 RGD:632363 NCBI chr12:4,895,092...4,939,340
Ensembl chr12:59,819...100,567 		JBrowse link
G Dclre1c DNA cross-link repair 1C acts_upstream_of_or_within ISO MGI:2667614 (PMID:12504013) RGD PMID:12504013 NCBI chr17:79,684,988...79,718,399
Ensembl chr17:74,776,935...74,809,186 		JBrowse link
G Eid3 EP300 interacting inhibitor of differentiation 3 involved_in IEA GO_REF:0000043 UniProt GO_REF:0000043 NCBI chr 7:20,860,073...20,861,395 JBrowse link
G ENSRNOG00000063582 involved_in IEA GO_REF:0000043 UniProt GO_REF:0000043 Ensembl chr14:22,414,838...22,415,965 JBrowse link
G ENSRNOG00000063954 involved_in IEA GO_REF:0000043 UniProt GO_REF:0000043 Ensembl chr 5:82,622,228...82,672,833 JBrowse link
G ENSRNOG00000064887 involved_in IEA GO_REF:0000043 UniProt GO_REF:0000043 Ensembl chr 4:149,498,772...149,499,899 JBrowse link
G ENSRNOG00000067229 involved_in IEA GO_REF:0000043 UniProt GO_REF:0000043 Ensembl chr 4:83,921,470...83,930,590 JBrowse link
G Ercc1 ERCC excision repair 1, endonuclease non-catalytic subunit acts_upstream_of_or_within ISO MGI:2183944 (PMID:11707424) RGD PMID:11707424 NCBI chr 1:88,099,308...88,135,966
Ensembl chr 1:78,996,390...79,007,963 		JBrowse link
G Exo1 exonuclease 1 involved_in ISO
IBA		 UniProtKB:P39875 (PMID:10364235)
GO_REF:0000033		 RGD
GO_Central		 PMID:10364235 GO_REF:0000033 NCBI chr13:90,341,947...90,366,861
Ensembl chr13:87,809,810...87,834,654 		JBrowse link
G Hdgfl2 HDGF like 2 involved_in IEA GO_REF:0000043 UniProt GO_REF:0000043 NCBI chr 9:909,581...929,195
Ensembl chr 9:909,614...929,186 		JBrowse link
G Hmgb1 high mobility group box 1 involved_in IEA GO_REF:0000043 UniProt GO_REF:0000043 NCBI chr12:11,009,236...11,015,941
Ensembl chr12:5,901,586...5,978,565
Ensembl chr16:5,901,586...5,978,565 		JBrowse link
G Hmgb1l2 high mobility group box 1 like 2 involved_in IEA GO_REF:0000043 UniProt GO_REF:0000043 NCBI chr  X:107,671,273...107,672,015
Ensembl chr  X:107,671,272...107,672,535 		JBrowse link
G Hmgb2 high mobility group box 2 involved_in IEA GO_REF:0000043 UniProt GO_REF:0000043 NCBI chr16:37,721,374...37,723,950
Ensembl chr16:32,710,658...32,713,140
Ensembl chr 1:32,710,658...32,713,140 		JBrowse link
G Hmgb2l1 high mobility group box 2-like 1 involved_in IEA GO_REF:0000043 UniProt GO_REF:0000043 NCBI chr11:47,252,583...47,253,646
Ensembl chr11:47,252,569...47,253,669
Ensembl chr 1:47,252,569...47,253,669 		JBrowse link
G Hmgb2l2 high mobility group box 2 like 2 involved_in IEA GO_REF:0000043 UniProt GO_REF:0000043 NCBI chr14:69,045,590...69,046,623
Ensembl chr14:69,045,641...69,046,640
Ensembl chr 1:69,045,641...69,046,640 		JBrowse link
G Iho1 interactor of HORMAD1 1 involved_in IEA GO_REF:0000002 InterPro GO_REF:0000002 NCBI chr 8:109,091,134...109,126,386
Ensembl chr 8:109,092,758...109,125,434 		JBrowse link
G Ino80c INO80 complex subunit C involved_in IEA GO_REF:0000043 UniProt GO_REF:0000043 NCBI chr18:15,378,764...15,398,574
Ensembl chr18:15,378,770...15,393,403 		JBrowse link
G Ino80e INO80 complex subunit E involved_in IEA GO_REF:0000043 UniProt GO_REF:0000043 NCBI chr 1:181,461,406...181,472,059
Ensembl chr 1:181,461,408...181,472,469 		JBrowse link
G Lig1 DNA ligase 1 involved_in IEA GO_REF:0000043 UniProt GO_REF:0000043 NCBI chr 1:74,165,688...74,204,400
Ensembl chr 1:74,165,842...74,204,413 		JBrowse link
G LOC134483981 high mobility group protein B1-like involved_in IEA GO_REF:0000043 UniProt GO_REF:0000043 Ensembl chr 1:222,796,915...222,798,193 JBrowse link
G LOC134485624 high mobility group protein B1-like involved_in IEA GO_REF:0000043 UniProt GO_REF:0000043
G Mcm8 minichromosome maintenance 8 homologous recombination repair factor involved_in IEA GO_REF:0000117 UniProt GO_REF:0000117 NCBI chr 3:120,086,741...120,117,008
Ensembl chr 3:120,086,763...120,117,008 		JBrowse link
G Mei4 meiotic double-stranded break formation protein 4 involved_in IEA GO_REF:0000002 InterPro GO_REF:0000002 NCBI chr 8:82,765,661...82,939,649
Ensembl chr 8:82,765,661...82,939,649 		JBrowse link
G Nono non-POU domain containing, octamer-binding involved_in IEA GO_REF:0000043 UniProt GO_REF:0000043 NCBI chr  X:66,554,131...66,571,992
Ensembl chr  X:66,554,098...66,571,952 		JBrowse link
G Nsmce1 NSE1 homolog, SMC5-SMC6 complex component involved_in IEA GO_REF:0000043 UniProt GO_REF:0000043 NCBI chr 1:180,030,355...180,058,541
Ensembl chr 1:180,030,160...180,058,417 		JBrowse link
G Nsmce4a NSE4 homolog A, SMC5-SMC6 complex component involved_in IEA GO_REF:0000104 UniProt GO_REF:0000104 NCBI chr 1:185,102,075...185,109,166
Ensembl chr 1:185,094,360...185,109,166 		JBrowse link
G Pagr1 Paxip1-associated glutamate-rich protein 1 involved_in IEA GO_REF:0000043 UniProt GO_REF:0000043 NCBI chr 1:181,622,698...181,625,024 JBrowse link
G Pif1 PIF1 5'-to-3' DNA helicase involved_in IEA GO_REF:0000104 UniProt GO_REF:0000104 NCBI chr 8:66,110,641...66,120,202
Ensembl chr 8:66,111,072...66,120,200 		JBrowse link
G Psmc3ip PSMC3 interacting protein involved_in IEA GO_REF:0000043 UniProt GO_REF:0000043 NCBI chr10:86,024,281...86,027,928
Ensembl chr10:86,023,950...86,027,423 		JBrowse link
G Rad50 RAD50 double strand break repair protein involved_in ISO
ISS		 (PMID:9705271)
GO_REF:0000024		 RGD
UniProt		 PMID:9705271 GO_REF:0000024 NCBI chr10:38,310,147...38,362,100
Ensembl chr10:37,808,726...37,861,396 		JBrowse link
G Rad51 RAD51 recombinase involved_in ISO (PMID:8929543) RGD PMID:8929543 NCBI chr 3:126,554,210...126,578,888
Ensembl chr 3:106,100,381...106,125,035 		JBrowse link
G Rad51ap1 RAD51 associated protein 1 acts_upstream_of_or_within ISO PR:Q08297 (PMID:9192668) RGD PMID:9192668 NCBI chr 4:159,759,454...159,772,473
Ensembl chr 4:159,759,459...159,772,524 		JBrowse link
G Rad51c RAD51 paralog C involved_in ISO (PMID:19451272) RGD PMID:19451272 NCBI chr10:72,702,299...72,728,980
Ensembl chr10:72,205,032...72,231,248 		JBrowse link
G Rad52 RAD52 homolog, DNA repair protein involved_in ISO (PMID:12370410), (PMID:8702565) RGD PMID:8702565 PMID:12370410 NCBI chr 4:153,106,062...153,128,598
Ensembl chr 4:153,106,062...153,128,207 		JBrowse link
G Rdm1 RAD52 motif containing 1 involved_in IEA GO_REF:0000117 UniProt GO_REF:0000117 NCBI chr10:86,562,871...86,573,034
Ensembl chr10:86,539,553...86,573,034 		JBrowse link
G Recql RecQ like helicase involved_in IEA GO_REF:0000002 InterPro GO_REF:0000002 NCBI chr 4:177,039,351...177,063,968
Ensembl chr 4:175,304,117...175,332,945 		JBrowse link
G Recql5 RecQ like helicase 5 involved_in IEA GO_REF:0000002 InterPro GO_REF:0000002 NCBI chr10:101,126,544...101,165,739
Ensembl chr10:101,126,547...101,165,652 		JBrowse link
G RFFL ring finger and FYVE like domain containing E3 ubiquitin protein ligase involved_in IEA UniProt GO_REF:0000043
G Rpa2 replication protein A2 involved_in IEA GO_REF:0000002 InterPro GO_REF:0000002 NCBI chr 5:144,976,789...144,989,445
Ensembl chr 5:144,976,748...144,987,350 		JBrowse link
G Rtel1 regulator of telomere elongation helicase 1 involved_in IEA GO_REF:0000002 InterPro GO_REF:0000002 NCBI chr 3:168,427,247...168,465,349
Ensembl chr 3:168,419,579...168,465,348 		JBrowse link
G Ruvbl1 RuvB-like AAA ATPase 1 involved_in IEA GO_REF:0000043 UniProt GO_REF:0000043 NCBI chr 4:120,932,486...120,967,400
Ensembl chr 4:120,932,417...121,029,384 		JBrowse link
G Ruvbl1-ps1 RuvB-like AAA ATPase 1, pseudogene 1 involved_in IEA GO_REF:0000043 UniProt GO_REF:0000043 NCBI chr  X:1,640,138...1,641,886
Ensembl chr  X:1,640,300...1,641,811 		JBrowse link
G Ruvbl2 RuvB-like AAA ATPase 2 involved_in IEA GO_REF:0000043 UniProt GO_REF:0000043 NCBI chr 1:95,902,014...95,915,247
Ensembl chr 1:95,901,701...95,915,342 		JBrowse link
G Slx1b SLX1 homolog B, structure-specific endonuclease subunit involved_in IEA GO_REF:0000104 UniProt GO_REF:0000104 NCBI chr 1:181,286,190...181,291,739
Ensembl chr 1:181,283,921...181,291,775 		JBrowse link
G Supv3l1 Suv3 like RNA helicase involved_in IEA
ISS
ISO		 GO_REF:0000107
GO_REF:0000024
(PMID:17961633)		 Ensembl
UniProt
RGD		 PMID:17961633 GO_REF:0000024 GO_REF:0000107 NCBI chr20:30,378,542...30,399,076
Ensembl chr20:30,378,550...30,399,054 		JBrowse link
G Tfpt TCF3 fusion partner involved_in IEA GO_REF:0000043 UniProt GO_REF:0000043 NCBI chr 1:65,587,633...65,597,407
Ensembl chr 1:65,582,359...65,611,689 		JBrowse link
G Top3a DNA topoisomerase III alpha involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr10:45,419,219...45,457,356
Ensembl chr10:45,419,217...45,457,559 		JBrowse link
G Top3b DNA topoisomerase III beta involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr11:84,097,018...84,125,474
Ensembl chr11:84,097,026...84,125,392 		JBrowse link
G Xrcc5 X-ray repair cross complementing 5 involved_in IEA GO_REF:0000043 UniProt GO_REF:0000043 NCBI chr 9:73,955,216...74,044,020
Ensembl chr 9:73,955,216...74,044,018 		JBrowse link
DNA repair term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G AABR07031480.1 involved_in IEA GO_REF:0000043 UniProt GO_REF:0000043
G AABR07035218.1 involved_in IEA GO_REF:0000043 UniProt GO_REF:0000043 Ensembl chr12:5,901,586...5,978,565 JBrowse link
G Abraxas1 abraxas 1, BRCA1 A complex subunit involved_in IEA GO_REF:0000043 UniProt GO_REF:0000043 NCBI chr14:9,100,650...9,115,012
Ensembl chr14:8,796,266...8,810,622 		JBrowse link
G Adprs ADP-ribosylserine hydrolase involved_in ISO (PMID:30045870) RGD PMID:30045870 NCBI chr 5:138,614,022...138,619,296
Ensembl chr 5:138,614,022...138,619,296 		JBrowse link
G Alkbh1 alkB homolog 1, histone H2A dioxygenase involved_in ISO (PMID:19959401) RGD PMID:19959401 NCBI chr 6:107,068,301...107,088,784
Ensembl chr 6:107,068,475...107,088,759 		JBrowse link
G Alkbh3 alkB homolog 3, alpha-ketoglutarate-dependent dioxygenase involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr 3:79,939,515...79,972,820
Ensembl chr 3:79,939,600...79,972,000 		JBrowse link
G Ankle1 ankyrin repeat and LEM domain containing 1 NOT|involved_in ISO (PMID:27010503) RGD PMID:27010503 NCBI chr16:18,076,413...18,082,356
Ensembl chr16:18,076,492...18,083,729 		JBrowse link
G Apex1 apurinic/apyrimidinic endodeoxyribonuclease 1 involved_in ISS
IEA
ISO		 GO_REF:0000024
GO_REF:0000043
(PMID:1627644), (PMID:9560228)		 UniProt
RGD		 PMID:1627644 PMID:9560228 GO_REF:0000024 GO_REF:0000043 NCBI chr15:26,618,146...26,620,330
Ensembl chr15:24,144,362...24,146,785 		JBrowse link
G Aplf aprataxin and PNKP like factor involved_in ISO (PMID:21211722), (PMID:30104678) RGD PMID:21211722 PMID:30104678 NCBI chr 4:120,070,471...120,122,656
Ensembl chr 4:120,070,471...120,122,633 		JBrowse link
G Aptx aprataxin involved_in IEA GO_REF:0000043 UniProt GO_REF:0000043 NCBI chr 5:55,798,896...55,822,963
Ensembl chr 5:55,800,248...55,822,855 		JBrowse link
G Asf1a anti-silencing function 1A histone chaperone acts_upstream_of_or_within ISO (PMID:11897662) RGD PMID:11897662 NCBI chr20:32,893,962...32,908,808
Ensembl chr20:32,893,573...32,908,808 		JBrowse link
G Atm ATM serine/threonine kinase acts_upstream_of_or_within ISO MGI:1857132|MGI:2155399 (PMID:11679583), (PMID:15364958), (PMID:15542845) RGD PMID:11679583 PMID:15364958 PMID:15542845 NCBI chr 8:62,724,939...62,829,040
Ensembl chr 8:53,831,093...53,932,437 		JBrowse link
G Atr ATR serine/threonine kinase acts_upstream_of_or_within
involved_in		 ISO
IBA		 (PMID:15364958)
GO_REF:0000033		 RGD
GO_Central		 PMID:15364958 GO_REF:0000033 NCBI chr 8:96,426,704...96,524,152
Ensembl chr 8:96,426,724...96,524,136 		JBrowse link
G Atrip ATR interacting protein involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr 8:109,708,440...109,722,511
Ensembl chr 8:109,708,440...109,722,477 		JBrowse link
G Atrx ATRX, chromatin remodeler involved_in IEA GO_REF:0000043 UniProt GO_REF:0000043 NCBI chr  X:70,850,981...70,997,330
Ensembl chr  X:70,850,981...70,997,330 		JBrowse link
G Bach1 BTB domain and CNC homolog 1 involved_in ISO (PMID:11301010) RGD PMID:11301010 NCBI chr11:26,939,429...26,974,876
Ensembl chr11:26,939,480...26,972,447 		JBrowse link
G Bard1 BRCA1 associated RING domain 1 involved_in IEA GO_REF:0000043 UniProt GO_REF:0000043 NCBI chr 9:80,069,960...80,144,167
Ensembl chr 9:72,623,155...72,694,265 		JBrowse link
G Blm BLM RecQ like helicase acts_upstream_of_or_within ISO (PMID:15364958) RGD PMID:15364958 NCBI chr 1:143,819,072...143,905,300
Ensembl chr 1:134,409,857...134,484,312 		JBrowse link
G Brca1 BRCA1, DNA repair associated involved_in IEA GO_REF:0000043 UniProt GO_REF:0000043 NCBI chr10:86,917,693...86,978,012
Ensembl chr10:86,418,000...86,477,304 		JBrowse link
G Cdc5l cell division cycle 5-like involved_in IEA GO_REF:0000043 UniProt GO_REF:0000043 NCBI chr 9:15,564,949...15,603,453
Ensembl chr 9:15,564,767...15,603,450 		JBrowse link
G Cdk2 cyclin dependent kinase 2 involved_in IEA GO_REF:0000043 UniProt GO_REF:0000043 NCBI chr 7:1,714,392...1,721,964
Ensembl chr 7:1,129,811...1,137,403 		JBrowse link
G Cdk7 cyclin-dependent kinase 7 involved_in IEA GO_REF:0000043 UniProt GO_REF:0000043 NCBI chr 2:31,840,558...31,865,422
Ensembl chr 2:31,840,558...31,865,383 		JBrowse link
G Cdk9 cyclin-dependent kinase 9 involved_in IEA GO_REF:0000043 UniProt GO_REF:0000043 NCBI chr 3:36,394,168...36,399,016
Ensembl chr 3:15,996,468...16,002,410 		JBrowse link
G Cenps centromere protein S involved_in ISO (PMID:20347429) RGD PMID:20347429 NCBI chr 5:159,563,917...159,573,534 JBrowse link
G Chaf1a chromatin assembly factor 1 subunit A involved_in IEA GO_REF:0000043 UniProt GO_REF:0000043 NCBI chr 9:873,953...900,701
Ensembl chr 9:874,051...900,654 		JBrowse link
G Chd1l chromodomain helicase DNA binding protein 1-like involved_in IEA
ISO		 GO_REF:0000002
(PMID:34486521)		 InterPro
RGD		 PMID:34486521 GO_REF:0000002 NCBI chr 2:187,819,869...187,906,359
Ensembl chr 2:185,139,308...185,217,595 		JBrowse link
G Chek1 checkpoint kinase 1 involved_in
acts_upstream_of_or_within		 ISO (PMID:19716789)
(PMID:15364958)		 RGD PMID:15364958 PMID:19716789 NCBI chr 8:36,420,565...36,443,477
Ensembl chr 8:36,420,569...36,441,009 		JBrowse link
G Chrna4 cholinergic receptor nicotinic alpha 4 subunit involved_in IEA
ISO		 GO_REF:0000107
(PMID:16332175)		 Ensembl
RGD		 PMID:16332175 GO_REF:0000107 NCBI chr 3:188,506,802...188,535,558
Ensembl chr 3:168,136,266...168,156,957 		JBrowse link
G Dclre1b DNA cross-link repair 1B involved_in IEA GO_REF:0000043 UniProt GO_REF:0000043 NCBI chr 2:191,309,909...191,318,399
Ensembl chr 2:191,309,913...191,318,423 		JBrowse link
G Ddb1 damage-specific DNA binding protein 1 involved_in TAS
IBA		 GO_REF:0000033 GO_Central
RGD		 PMID:12145536 GO_REF:0000033, RGD:632554 NCBI chr 1:207,252,890...207,278,685
Ensembl chr 1:207,252,890...207,278,676 		JBrowse link
G Ddb2 damage specific DNA binding protein 2 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr 3:97,640,923...97,667,617
Ensembl chr 3:77,185,109...77,207,631 		JBrowse link
G Dmap1 DNA methyltransferase 1-associated protein 1 involved_in IEA GO_REF:0000002 InterPro GO_REF:0000002 NCBI chr 5:131,143,726...131,151,760
Ensembl chr 5:131,143,729...131,151,742 		JBrowse link
G Dna2 DNA replication helicase/nuclease 2 involved_in IEA GO_REF:0000043 UniProt GO_REF:0000043 NCBI chr20:25,661,652...25,690,598
Ensembl chr20:25,662,055...25,716,319 		JBrowse link
G Dot1l DOT1 like histone lysine methyltransferase involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr 7:8,918,764...8,959,474
Ensembl chr 7:8,917,786...8,956,475 		JBrowse link
G Eepd1 endonuclease/exonuclease/phosphatase family domain containing 1 involved_in IEA GO_REF:0000002 InterPro GO_REF:0000002 NCBI chr 8:23,957,258...24,064,343
Ensembl chr 8:23,957,255...24,064,340 		JBrowse link
G Eid3 EP300 interacting inhibitor of differentiation 3 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr 7:20,860,073...20,861,395 JBrowse link
G Endov endonuclease V involved_in ISO (PMID:12853604) RGD PMID:12853604 NCBI chr10:104,760,059...104,777,732
Ensembl chr10:104,760,137...104,775,969 		JBrowse link
G ENSRNOG00000063582 involved_in IEA GO_REF:0000043 UniProt GO_REF:0000043 Ensembl chr14:22,414,838...22,415,965 JBrowse link
G ENSRNOG00000064887 involved_in IEA GO_REF:0000043 UniProt GO_REF:0000043 Ensembl chr 4:149,498,772...149,499,899 JBrowse link
G ENSRNOG00000066166 involved_in IEA GO_REF:0000002 InterPro GO_REF:0000002 Ensembl chr13:62,124,375...62,124,887 JBrowse link
G ENSRNOG00000069305 involved_in IEA GO_REF:0000002 InterPro GO_REF:0000002 Ensembl chr13:18,979,537...18,979,779 JBrowse link
G Ep400 E1A binding protein p400 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr12:45,891,886...46,002,523
Ensembl chr12:45,891,916...45,998,861 		JBrowse link
G Ercc1 ERCC excision repair 1, endonuclease non-catalytic subunit acts_upstream_of_or_within ISO (PMID:25538220)
MGI:2158940 (PMID:12466203)		 RGD PMID:12466203 PMID:25538220 NCBI chr 1:88,099,308...88,135,966
Ensembl chr 1:78,996,390...79,007,963 		JBrowse link
G Ercc2 ERCC excision repair 2, TFIIH core complex helicase subunit acts_upstream_of_or_within ISO MGI:2183949 (PMID:11950998) RGD PMID:11950998 NCBI chr 1:88,161,342...88,175,102
Ensembl chr 1:79,033,326...79,047,102 		JBrowse link
G Ercc3 ERCC excision repair 3, TFIIH core complex helicase subunit involved_in ISO (PMID:2167179) RGD PMID:2167179 NCBI chr18:24,157,831...24,188,543
Ensembl chr18:23,883,580...23,914,329 		JBrowse link
G Ercc4 ERCC excision repair 4, endonuclease catalytic subunit involved_in
acts_upstream_of_or_within		 ISO UniProtKB:Q15554 (PMID:17055345), (PMID:19596235)
MGI:3028660 (PMID:14729965)		 RGD PMID:14729965 PMID:17055345 PMID:19596235 NCBI chr10:2,926,085...2,958,176
Ensembl chr10:2,419,038...2,448,369
Ensembl chr10:2,419,038...2,448,369 		JBrowse link
G Ercc5 ERCC excision repair 5, endonuclease acts_upstream_of_or_within ISO MGI:3043589 (PMID:15082767) RGD PMID:15082767 NCBI chr 9:53,801,471...53,846,611
Ensembl chr 9:46,309,389...46,354,472 		JBrowse link
G Ercc6 ERCC excision repair 6, chromatin remodeling factor involved_in
acts_upstream_of_or_within		 ISO (PMID:26218421)
MGI:1097693|MGI:1932102 (PMID:10806208), (PMID:12447686), (PMID:17213818)		 RGD PMID:10806208 PMID:12447686 PMID:17213818 PMID:26218421 NCBI chr16:7,771,311...7,841,895
Ensembl chr16:7,765,013...7,835,587 		JBrowse link
G Ercc6l ERCC excision repair 6 like, spindle assembly checkpoint helicase involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr  X:67,245,414...67,261,222
Ensembl chr  X:67,245,414...67,280,756 		JBrowse link
G Exosc10 exosome component 10 involved_in IEA GO_REF:0000043 UniProt GO_REF:0000043 NCBI chr 5:158,995,313...159,018,940
Ensembl chr 5:158,995,313...159,018,940 		JBrowse link
G Eya2 EYA transcriptional coactivator and phosphatase 2 involved_in IEA GO_REF:0000043 UniProt GO_REF:0000043 NCBI chr 3:174,754,772...174,938,035
Ensembl chr 3:154,335,400...154,518,793 		JBrowse link
G Eya4 EYA transcriptional coactivator and phosphatase 4 involved_in IEA GO_REF:0000043 UniProt GO_REF:0000043 NCBI chr 1:22,172,275...22,415,978
Ensembl chr 1:22,172,275...22,415,976 		JBrowse link
G Fan1 FANCD2 and FANCI associated nuclease 1 involved_in ISO (PMID:20603073) RGD PMID:20603073 NCBI chr 1:127,327,098...127,356,807
Ensembl chr 1:117,917,099...117,944,977 		JBrowse link
G Fancd2 FA complementation group D2 involved_in IEA GO_REF:0000002 InterPro GO_REF:0000002 NCBI chr 4:148,234,633...148,299,035
Ensembl chr 4:146,679,179...146,743,412 		JBrowse link
G Fanci FA complementation group I involved_in IEA GO_REF:0000002 InterPro GO_REF:0000002 NCBI chr 1:133,327,264...133,383,661
Ensembl chr 1:133,327,297...133,383,640 		JBrowse link
G Fancl FA complementation group L involved_in ISO
IBA		 (PMID:16916645)
GO_REF:0000033		 RGD
GO_Central		 PMID:16916645 GO_REF:0000033 NCBI chr14:100,249,733...100,317,958
Ensembl chr14:100,248,875...100,314,255 		JBrowse link
G Fbh1 F-box DNA helicase 1 involved_in ISO (PMID:23319600) RGD PMID:23319600 NCBI chr17:66,749,506...66,787,590
Ensembl chr17:66,749,534...66,787,590 		JBrowse link
G Fbxo6 F-box protein 6 involved_in IEA GO_REF:0000043 UniProt GO_REF:0000043 NCBI chr 5:158,576,729...158,582,520
Ensembl chr 5:158,576,759...158,582,525 		JBrowse link
G Fbxw7 F-box and WD repeat domain containing 7 involved_in IEA GO_REF:0000043 UniProt GO_REF:0000043 NCBI chr 2:172,447,738...172,609,591
Ensembl chr 2:170,149,694...170,309,941 		JBrowse link
G Fen1 flap structure-specific endonuclease 1 acts_upstream_of_or_within ISO MGI:2670036 (PMID:12861020) RGD PMID:12861020 NCBI chr 1:216,270,016...216,274,873
Ensembl chr 1:206,844,884...206,850,003 		JBrowse link
G Fh fumarate hydratase involved_in IEA GO_REF:0000043 UniProt GO_REF:0000043 NCBI chr13:90,056,565...90,082,450
Ensembl chr13:87,524,337...87,550,266 		JBrowse link
G Fmr1 fragile X messenger ribonucleoprotein 1 involved_in ISS
ISO		 GO_REF:0000024
(PMID:24813610)		 UniProt
RGD		 PMID:24813610 GO_REF:0000024 NCBI chr  X:152,284,857...152,322,686
Ensembl chr  X:147,240,301...147,278,050 		JBrowse link
G Foxm1 forkhead box M1 involved_in IEA GO_REF:0000043 UniProt GO_REF:0000043 NCBI chr 4:163,325,628...163,338,100
Ensembl chr 4:161,638,816...161,650,684 		JBrowse link
G Gtf2h1 general transcription factor IIH subunit 1 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr 1:97,321,417...97,349,455
Ensembl chr 1:97,321,394...97,349,455 		JBrowse link
G H2ax H2A.X variant histone acts_upstream_of_or_within ISO MGI:2156048 (PMID:11934988), (PMID:15364958) RGD PMID:11934988 PMID:15364958 NCBI chr 8:53,568,718...53,570,072
Ensembl chr 8:44,671,786...44,673,239
Ensembl chr 4:44,671,786...44,673,239 		JBrowse link
G Hdac10 histone deacetylase 10 involved_in IEA GO_REF:0000043 UniProt GO_REF:0000043 NCBI chr 7:122,078,768...122,084,457
Ensembl chr 7:120,199,129...120,204,228 		JBrowse link
G Hdac9 histone deacetylase 9 acts_upstream_of_or_within ISO MGI:1890508 (PMID:21746928) RGD PMID:21746928 NCBI chr 6:56,489,472...57,351,654
Ensembl chr 6:50,763,590...51,625,333 		JBrowse link
G Hdgfl2 HDGF like 2 involved_in IEA GO_REF:0000043 UniProt GO_REF:0000043 NCBI chr 9:909,581...929,195
Ensembl chr 9:909,614...929,186 		JBrowse link
G Hinfp histone H4 transcription factor involved_in ISO (PMID:17974976) RGD PMID:17974976 NCBI chr 8:53,525,576...53,541,101
Ensembl chr 8:44,634,333...44,641,000 		JBrowse link
G Hltf helicase-like transcription factor involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr 2:102,549,724...102,609,492
Ensembl chr 2:102,549,724...102,609,327 		JBrowse link
G Hmgb1 high mobility group box 1 involved_in IEA GO_REF:0000043 UniProt GO_REF:0000043 NCBI chr12:11,009,236...11,015,941
Ensembl chr12:5,901,586...5,978,565
Ensembl chr16:5,901,586...5,978,565 		JBrowse link
G Hmgb1l2 high mobility group box 1 like 2 involved_in IEA GO_REF:0000043 UniProt GO_REF:0000043 NCBI chr  X:107,671,273...107,672,015
Ensembl chr  X:107,671,272...107,672,535 		JBrowse link
G Hpf1 histone PARylation factor 1 involved_in ISO (PMID:32028527), (PMID:34108479) RGD PMID:32028527 PMID:34108479 NCBI chr16:29,203,749...29,219,651
Ensembl chr16:29,183,256...29,219,716 		JBrowse link
G Hspa1a heat shock protein family A (Hsp70) member 1A acts_upstream_of_or_within ISO MGI:3028843 (PMID:14701760) RGD PMID:14701760 NCBI chr20:3,875,411...3,877,866
Ensembl chr20:3,856,006...3,873,227 		JBrowse link
G Huwe1 HECT, UBA and WWE domain containing E3 ubiquitin protein ligase 1 involved_in IEA GO_REF:0000043 UniProt GO_REF:0000043 NCBI chr  X:24,350,708...24,480,798
Ensembl chr  X:20,873,795...21,001,262 		JBrowse link
G Inip INTS3 and NABP interacting protein involved_in ISO
IBA		 (PMID:19605351)
GO_REF:0000033		 RGD
GO_Central		 PMID:19605351 GO_REF:0000033 NCBI chr 5:74,648,392...74,662,628
Ensembl chr 5:74,648,392...74,662,628 		JBrowse link
G Ino80 INO80 complex ATPase subunit involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr 3:106,368,455...106,465,716
Ensembl chr 3:106,368,455...106,467,911 		JBrowse link
G Ino80c INO80 complex subunit C involved_in IEA GO_REF:0000043 UniProt GO_REF:0000043 NCBI chr18:15,378,764...15,398,574
Ensembl chr18:15,378,770...15,393,403 		JBrowse link
G Ino80e INO80 complex subunit E involved_in IEA GO_REF:0000043 UniProt GO_REF:0000043 NCBI chr 1:181,461,406...181,472,059
Ensembl chr 1:181,461,408...181,472,469 		JBrowse link
G Ints3 integrator complex subunit 3 involved_in ISO (PMID:19605351), (PMID:19683501) RGD PMID:19605351 PMID:19683501 NCBI chr 2:175,859,421...175,911,683
Ensembl chr 2:175,859,440...175,911,709 		JBrowse link
G Kat5 lysine acetyltransferase 5 involved_in IEA GO_REF:0000043 UniProt GO_REF:0000043 NCBI chr 1:212,325,089...212,332,640
Ensembl chr 1:202,895,751...202,903,458 		JBrowse link
G Kat7 lysine acetyltransferase 7 involved_in IEA GO_REF:0000043 UniProt GO_REF:0000043 NCBI chr10:80,718,335...80,752,387
Ensembl chr10:80,221,524...80,255,567 		JBrowse link
G Kif22 kinesin family member 22 involved_in IEA GO_REF:0000002 InterPro GO_REF:0000002 NCBI chr 1:181,635,347...181,650,351
Ensembl chr 1:181,635,183...181,650,401 		JBrowse link
G Kmt5b lysine methyltransferase 5B involved_in ISO
ISS		 (PMID:28114273)
GO_REF:0000024		 RGD
UniProt		 PMID:28114273 GO_REF:0000024 NCBI chr 1:201,000,444...201,049,819
Ensembl chr 1:201,000,444...201,049,819 		JBrowse link
G Kmt5c lysine methyltransferase 5C involved_in ISO
ISS		 (PMID:28114273)
GO_REF:0000024		 RGD
UniProt		 PMID:28114273 GO_REF:0000024 NCBI chr 1:78,128,325...78,135,931
Ensembl chr 1:69,099,539...69,107,145 		JBrowse link
G Lig1 DNA ligase 1 NOT|acts_upstream_of_or_within
involved_in		 IDA
ISO
IEA		 MGI:2179196 (PMID:11896201)
(PMID:21390131)
GO_REF:0000117		 RGD
UniProt		 PMID:11896201 PMID:21390131 PMID:1730240 GO_REF:0000117, RGD:724410 NCBI chr 1:74,165,688...74,204,400
Ensembl chr 1:74,165,842...74,204,413 		JBrowse link
G Lig4 DNA ligase 4 acts_upstream_of_or_within ISO MGI:1857732 (PMID:11779495), (PMID:21390131) RGD PMID:11779495 PMID:21390131 NCBI chr16:79,518,393...79,526,956
Ensembl chr16:79,518,312...79,527,040 		JBrowse link
G LOC100363428 PCNA-associated factor-like involved_in IEA GO_REF:0000043 UniProt GO_REF:0000043 NCBI chr15:84,610,314...84,612,236
Ensembl chr15:84,610,352...84,610,684 		JBrowse link
G LOC134483981 high mobility group protein B1-like involved_in IEA GO_REF:0000043 UniProt GO_REF:0000043 Ensembl chr 1:222,796,915...222,798,193 JBrowse link
G LOC134485624 high mobility group protein B1-like involved_in IEA GO_REF:0000043 UniProt GO_REF:0000043
G Macroh2a1 macroH2A.1 histone involved_in ISO (PMID:21211722) RGD PMID:21211722 NCBI chr17:8,484,340...8,547,268
Ensembl chr17:8,479,372...8,542,072 		JBrowse link
G Mbd4 methyl-CpG binding domain 4 DNA glycosylase involved_in IEA GO_REF:0000043
GO_REF:0000002		 UniProt
InterPro		 GO_REF:0000002 GO_REF:0000043 NCBI chr 4:150,565,646...150,577,433
Ensembl chr 4:148,894,280...148,904,982 		JBrowse link
G Mdc1 mediator of DNA damage checkpoint 1 involved_in IEA GO_REF:0000043 UniProt GO_REF:0000043 NCBI chr20:2,898,496...2,914,960
Ensembl chr20:2,895,505...2,910,240 		JBrowse link
G Mgmt O-6-methylguanine-DNA methyltransferase involved_in
acts_upstream_of_or_within		 IEA
ISO
IBA		 GO_REF:0000043
(PMID:13679151)
GO_REF:0000033		 UniProt
RGD
GO_Central		 PMID:13679151 GO_REF:0000033 GO_REF:0000043 NCBI chr 1:201,140,832...201,367,481
Ensembl chr 1:191,710,930...191,937,756 		JBrowse link
G Mlh1 mutL homolog 1 acts_upstream_of_or_within ISO MGI:1858054|MGI:1930998 (PMID:13679151), (PMID:15480418) RGD PMID:13679151 PMID:15480418 NCBI chr 8:120,074,871...120,112,109
Ensembl chr 8:111,196,468...111,233,617 		JBrowse link
G Mms19 MMS19 homolog, cytosolic iron-sulfur assembly component involved_in IEA GO_REF:0000104 UniProt GO_REF:0000104 NCBI chr 1:240,757,279...240,794,291
Ensembl chr 1:240,757,282...240,794,288 		JBrowse link
G Mnat1 MNAT1 component of CDK activating kinase involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr 6:91,814,703...91,971,945
Ensembl chr 6:91,814,749...91,970,744 		JBrowse link
G Morf4l2 mortality factor 4 like 2 involved_in IEA GO_REF:0000043 UniProt GO_REF:0000043 NCBI chr  X:100,082,562...100,093,658
Ensembl chr  X:100,082,404...100,093,728 		JBrowse link
G Msh2 mutS homolog 2 involved_in
acts_upstream_of_or_within		 ISO (PMID:8942985)
(PMID:12687013)		 RGD PMID:8942985 PMID:12687013 NCBI chr 6:12,567,368...12,626,534
Ensembl chr 6:6,813,795...6,872,938 		JBrowse link
G Msh3 mutS homolog 3 involved_in ISO (PMID:8942985) RGD PMID:8942985 NCBI chr 2:25,179,400...25,320,857 JBrowse link
G Msh6 mutS homolog 6 involved_in ISO (PMID:8942985) RGD PMID:8942985 NCBI chr 6:12,316,190...12,333,505
Ensembl chr 6:6,562,632...6,579,956 		JBrowse link
G Mus81 MUS81 structure-specific endonuclease subunit involved_in ISO (PMID:19596235) RGD PMID:19596235 NCBI chr 1:202,790,295...202,796,008
Ensembl chr 1:202,790,466...202,795,843 		JBrowse link
G Nabp1 nucleic acid binding protein 1 involved_in ISS
ISO		 GO_REF:0000024
(PMID:19683501)		 UniProt
RGD		 PMID:19683501 GO_REF:0000024 NCBI chr 9:50,098,552...50,133,982
Ensembl chr 9:50,126,726...50,134,107 		JBrowse link
G Nabp2 nucleic acid binding protein 2 involved_in ISO
IEA
ISS		 (PMID:18449195), (PMID:19683501)
GO_REF:0000043
(PMID:25589350)
GO_REF:0000024		 RGD
UniProt		 PMID:18449195 PMID:19683501 PMID:25589350 GO_REF:0000024 GO_REF:0000043 NCBI chr 7:830,949...836,551
Ensembl chr 7:830,949...838,027 		JBrowse link
G Neil1 nei-like DNA glycosylase 1 acts_upstream_of_or_within ISO (PMID:12200441) RGD PMID:12200441 NCBI chr 8:57,550,142...57,556,884
Ensembl chr 8:57,550,147...57,556,258 		JBrowse link
G Nme3 NME/NM23 nucleoside diphosphate kinase 3 involved_in ISO (PMID:26945015) RGD PMID:26945015 NCBI chr10:13,917,309...13,918,415
Ensembl chr10:13,917,403...13,918,359 		JBrowse link
G Nono non-POU domain containing, octamer-binding involved_in IEA GO_REF:0000043 UniProt GO_REF:0000043 NCBI chr  X:66,554,131...66,571,992
Ensembl chr  X:66,554,098...66,571,952 		JBrowse link
G Nop53 NOP53 ribosome biogenesis factor involved_in ISO (PMID:21741933) RGD PMID:21741933 NCBI chr 1:76,629,084...76,636,902
Ensembl chr 1:76,629,069...76,636,902 		JBrowse link
G Npm1 nucleophosmin 1 involved_in ISO
ISS		 (PMID:19188445)
GO_REF:0000024		 RGD
UniProt		 PMID:19188445 GO_REF:0000024 NCBI chr10:17,741,512...17,751,626
Ensembl chr10:17,739,941...17,751,645
Ensembl chr  X:17,739,941...17,751,645 		JBrowse link
G Nsmce1 NSE1 homolog, SMC5-SMC6 complex component involved_in IEA GO_REF:0000104 UniProt GO_REF:0000104 NCBI chr 1:180,030,355...180,058,541
Ensembl chr 1:180,030,160...180,058,417 		JBrowse link
G Nsmce3 NSE3 homolog, SMC5-SMC6 complex component involved_in ISO (PMID:27427983) RGD PMID:27427983 NCBI chr 1:118,401,302...118,402,629 JBrowse link
G Nsmce4a NSE4 homolog A, SMC5-SMC6 complex component involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr 1:185,102,075...185,109,166
Ensembl chr 1:185,094,360...185,109,166 		JBrowse link
G Ogg1 8-oxoguanine DNA glycosylase acts_upstream_of_or_within ISO MGI:1100494|MGI:2386212|MGI:2386943 (PMID:11532868), (PMID:12447686), (PMID:12874039), (PMID:17213818) RGD PMID:11532868 PMID:12447686 PMID:12874039 PMID:17213818 NCBI chr 4:148,030,237...148,037,599
Ensembl chr 4:146,474,750...146,484,766 		JBrowse link
G Otub1 OTU deubiquitinase, ubiquitin aldehyde binding 1 involved_in IEA GO_REF:0000043 UniProt GO_REF:0000043 NCBI chr 1:204,387,215...204,395,495
Ensembl chr 1:204,387,215...204,395,483 		JBrowse link
G Pagr1 Paxip1-associated glutamate-rich protein 1 involved_in IEA GO_REF:0000043 UniProt GO_REF:0000043 NCBI chr 1:181,622,698...181,625,024 JBrowse link
G Park7 Parkinsonism associated deglycase involved_in ISO
ISS		 (PMID:28596309)
GO_REF:0000024		 RGD
UniProt		 PMID:28596309 GO_REF:0000024 NCBI chr 5:166,636,551...166,659,825
Ensembl chr 5:161,353,719...161,376,970 		JBrowse link
G Parp1 poly (ADP-ribose) polymerase 1 involved_in ISO (PMID:30104678), (PMID:30675909), (PMID:31796734), (PMID:32028527), (PMID:33186521), (PMID:34874266)
(PMID:22736760)		 RGD PMID:22736760 PMID:30104678 PMID:30675909 PMID:31796734 PMID:32028527 More... NCBI chr13:94,839,484...94,871,295
Ensembl chr13:92,307,586...92,339,404 		JBrowse link
G Parp2 poly (ADP-ribose) polymerase 2 involved_in ISO (PMID:30104678), (PMID:34108479) RGD PMID:30104678 PMID:34108479 NCBI chr15:24,034,069...24,044,340
Ensembl chr15:24,034,106...24,044,338 		JBrowse link
G Parpbp PARP1 binding protein involved_in IEA GO_REF:0000043 UniProt GO_REF:0000043 NCBI chr 7:22,511,427...22,580,834
Ensembl chr 7:22,511,427...22,573,695 		JBrowse link
G Pclaf PCNA clamp associated factor involved_in IEA GO_REF:0000043 UniProt GO_REF:0000043 NCBI chr 8:66,420,606...66,432,994
Ensembl chr 8:66,420,587...66,432,994
Ensembl chr 8:66,420,587...66,432,994 		JBrowse link
G Pds5a PDS5 cohesin associated factor A involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr14:42,551,653...42,651,074
Ensembl chr14:42,552,647...42,648,669 		JBrowse link
G Pds5b PDS5 cohesin associated factor B involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr12:202,481...345,596
Ensembl chr12:255,313...345,596 		JBrowse link
G Pif1 PIF1 5'-to-3' DNA helicase involved_in IEA GO_REF:0000104 UniProt GO_REF:0000104 NCBI chr 8:66,110,641...66,120,202
Ensembl chr 8:66,111,072...66,120,200 		JBrowse link
G Pms2 PMS1 homolog 2, mismatch repair system component acts_upstream_of_or_within ISO MGI:1857947 (PMID:15480418) RGD PMID:15480418 NCBI chr12:15,790,478...15,814,790
Ensembl chr12:10,676,764...10,701,066 		JBrowse link
G Pnkp polynucleotide kinase 3'-phosphatase involved_in ISO
IBA		 UniProtKB:J7Q8E6|UniProtKB:J7QRV0 (PMID:10446192)
GO_REF:0000033		 RGD
GO_Central		 PMID:10446192 GO_REF:0000033 NCBI chr 1:95,341,465...95,346,921
Ensembl chr 1:95,341,620...95,346,920 		JBrowse link
G Pola1 DNA polymerase alpha 1, catalytic subunit involved_in
NOT|involved_in		 ISO
ISS		 (PMID:11470886)
GO_REF:0000024
(PMID:3335506)		 RGD
UniProt		 PMID:3335506 PMID:11470886 GO_REF:0000024 NCBI chr  X:58,034,617...58,348,612
Ensembl chr  X:58,034,619...58,348,536 		JBrowse link
G Polb DNA polymerase beta involved_in IEA GO_REF:0000043 UniProt GO_REF:0000043 NCBI chr16:69,379,438...69,402,710
Ensembl chr16:69,379,400...69,404,812 		JBrowse link
G Pold2 DNA polymerase delta 2, accessory subunit involved_in IEA GO_REF:0000043 UniProt GO_REF:0000043 NCBI chr14:80,748,971...80,755,188
Ensembl chr14:80,748,974...80,755,160 		JBrowse link
G Polk DNA polymerase kappa involved_in
acts_upstream_of_or_within		 ISO (PMID:28297716)
MGI:2445458 (PMID:12555660)		 RGD PMID:12555660 PMID:28297716 NCBI chr 2:27,822,228...27,882,331
Ensembl chr 2:27,822,679...27,882,313 		JBrowse link
G Poll DNA polymerase lambda involved_in IEA GO_REF:0000043 UniProt GO_REF:0000043 NCBI chr 1:244,400,202...244,408,762
Ensembl chr 1:244,400,204...244,408,662 		JBrowse link
G Polq DNA polymerase theta acts_upstream_of_or_within ISO MGI:107202|MGI:2656007 (PMID:12663541), (PMID:15542845) RGD PMID:12663541 PMID:15542845 NCBI chr11:77,179,190...77,281,270
Ensembl chr11:63,673,816...63,775,878 		JBrowse link
G Prpf19 pre-mRNA processing factor 19 involved_in IEA GO_REF:0000043 UniProt GO_REF:0000043 NCBI chr 1:207,541,582...207,552,664
Ensembl chr 1:207,541,595...207,552,662 		JBrowse link
G Psme4 proteasome activator subunit 4 involved_in ISO (PMID:23706739) RGD PMID:23706739 NCBI chr14:104,505,716...104,609,410
Ensembl chr14:104,505,716...104,609,408 		JBrowse link
G Pttg1 PTTG1 regulator of sister chromatid separation, securin involved_in IEA GO_REF:0000043 UniProt GO_REF:0000043 NCBI chr10:28,394,940...28,406,410
Ensembl chr10:27,893,689...27,904,837 		JBrowse link
G Pwwp3a PWWP domain containing 3A, DNA repair factor involved_in ISS
IBA
IEA
ISO		 GO_REF:0000024
GO_REF:0000033
GO_REF:0000107
(PMID:20347427)		 UniProt
GO_Central
Ensembl
RGD		 PMID:20347427 GO_REF:0000024 GO_REF:0000033 GO_REF:0000107 NCBI chr 7:9,465,180...9,482,053
Ensembl chr 7:9,465,195...9,481,966 		JBrowse link
G Rad1 RAD1 checkpoint DNA exonuclease involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr 2:59,461,597...59,469,707
Ensembl chr 2:59,461,607...59,469,689 		JBrowse link
G Rad17 RAD17 checkpoint clamp loader component involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr 2:31,764,260...31,794,542
Ensembl chr 2:31,764,261...31,794,072 		JBrowse link
G Rad50 RAD50 double strand break repair protein involved_in ISS
IEA
ISO		 GO_REF:0000024
GO_REF:0000043
(PMID:9705271)		 UniProt
RGD		 PMID:9705271 GO_REF:0000024 GO_REF:0000043 NCBI chr10:38,310,147...38,362,100
Ensembl chr10:37,808,726...37,861,396 		JBrowse link
G Rad51c RAD51 paralog C involved_in ISO (PMID:19451272) RGD PMID:19451272 NCBI chr10:72,702,299...72,728,980
Ensembl chr10:72,205,032...72,231,248 		JBrowse link
G Rad9a RAD9 checkpoint clamp component A involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr 1:201,488,511...201,553,582
Ensembl chr 1:201,487,136...201,553,608 		JBrowse link
G Rad9b RAD9 checkpoint clamp component B involved_in IEA
IBA		 GO_REF:0000104
GO_REF:0000033		 UniProt
GO_Central		 GO_REF:0000033 GO_REF:0000104 NCBI chr12:34,217,868...34,248,380
Ensembl chr12:34,218,024...34,248,372 		JBrowse link
G Rbbp8 RB binding protein 8, endonuclease involved_in IEA GO_REF:0000043 UniProt GO_REF:0000043 NCBI chr18:2,922,985...2,988,851
Ensembl chr18:2,921,286...2,988,846 		JBrowse link
G Rdm1 RAD52 motif containing 1 involved_in IEA GO_REF:0000117 UniProt GO_REF:0000117 NCBI chr10:86,562,871...86,573,034
Ensembl chr10:86,539,553...86,573,034 		JBrowse link
G Recql RecQ like helicase involved_in IEA GO_REF:0000002 InterPro GO_REF:0000002 NCBI chr 4:177,039,351...177,063,968
Ensembl chr 4:175,304,117...175,332,945 		JBrowse link
G Recql5 RecQ like helicase 5 involved_in ISS
ISO		 GO_REF:0000024
(PMID:22973052)		 UniProt
RGD		 PMID:22973052 GO_REF:0000024 NCBI chr10:101,126,544...101,165,739
Ensembl chr10:101,126,547...101,165,652 		JBrowse link
G Rev1 REV1, DNA directed polymerase involved_in ISO (PMID:21926160) RGD PMID:21926160 NCBI chr 9:40,278,100...40,351,764
Ensembl chr 9:40,278,101...40,351,576 		JBrowse link
G Rev3l REV3 like, DNA directed polymerase zeta catalytic subunit acts_upstream_of_or_within ISO MGI:2183197 (PMID:11884603) RGD PMID:11884603 NCBI chr20:43,131,841...43,290,102
Ensembl chr20:43,132,363...43,290,099 		JBrowse link
G Rexo4 REX4 homolog, 3'-5' exonuclease involved_in ISO (PMID:21602889) RGD PMID:21602889 NCBI chr 3:10,280,654...10,291,003
Ensembl chr 3:10,280,654...10,290,996 		JBrowse link
G Rfc1 replication factor C subunit 1 involved_in IEA GO_REF:0000002 InterPro GO_REF:0000002 NCBI chr14:43,319,768...43,395,028
Ensembl chr14:42,966,324...43,041,370 		JBrowse link
G Rfc2 replication factor C subunit 2 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr12:22,120,449...22,133,576
Ensembl chr12:22,120,010...22,133,557 		JBrowse link
G Rfc3 replication factor C subunit 3 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr12:1,000,987...1,011,778
Ensembl chr12:1,000,994...1,011,778 		JBrowse link
G Rfc4 replication factor C subunit 4 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr11:77,749,642...77,764,123
Ensembl chr11:77,749,638...77,764,122 		JBrowse link
G Rfc5 replication factor C subunit 5 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr12:39,207,484...39,217,041
Ensembl chr12:39,207,484...39,217,312 		JBrowse link
G RFFL ring finger and FYVE like domain containing E3 ubiquitin protein ligase involved_in IEA InterPro
UniProt		 GO_REF:0000002 GO_REF:0000043 GO_REF:0000117
G Rmi2 RecQ mediated genome instability 2 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr10:4,829,333...4,837,264
Ensembl chr10:4,830,553...4,837,235 		JBrowse link
G Rnf138 ring finger protein 138 involved_in IEA GO_REF:0000043 UniProt GO_REF:0000043 NCBI chr18:12,291,557...12,315,931
Ensembl chr18:12,291,590...12,315,930 		JBrowse link
G Rpa1 replication protein A1 involved_in ISO (PMID:18469000), (PMID:20545304) RGD PMID:18469000 PMID:20545304 NCBI chr10:60,148,869...60,199,970
Ensembl chr10:60,148,793...60,199,949 		JBrowse link
G Rpa2 replication protein A2 involved_in IEA GO_REF:0000002 InterPro GO_REF:0000002 NCBI chr 5:144,976,789...144,989,445
Ensembl chr 5:144,976,748...144,987,350 		JBrowse link
G Rpa3 replication protein A3 involved_in ISO (PMID:20545304) RGD PMID:20545304 NCBI chr 4:36,304,649...36,307,755
Ensembl chr 4:36,304,651...36,307,709 		JBrowse link
G Rps3 ribosomal protein S3 involved_in ISO (PMID:19059439) RGD PMID:19059439 NCBI chr 1:153,778,363...153,783,663
Ensembl chr 1:153,777,472...153,783,680 		JBrowse link
G Rrm1 ribonucleotide reductase catalytic subunit M1 involved_in ISO (PMID:11719458) RGD PMID:11719458 NCBI chr 1:166,235,904...166,260,206
Ensembl chr 1:156,823,960...156,848,261 		JBrowse link
G Rrm2b ribonucleotide reductase regulatory TP53 inducible subunit M2B involved_in
acts_upstream_of_or_within		 ISO (PMID:11719458)
MGI:2672883 (PMID:12858174)		 RGD PMID:11719458 PMID:12858174 NCBI chr 7:70,962,008...70,993,726
Ensembl chr 7:69,078,291...69,108,633 		JBrowse link
G Rtel1 regulator of telomere elongation helicase 1 involved_in IEA GO_REF:0000104 UniProt GO_REF:0000104 NCBI chr 3:168,427,247...168,465,349
Ensembl chr 3:168,419,579...168,465,348 		JBrowse link
G Ruvbl1 RuvB-like AAA ATPase 1 involved_in IEA GO_REF:0000043 UniProt GO_REF:0000043 NCBI chr 4:120,932,486...120,967,400
Ensembl chr 4:120,932,417...121,029,384 		JBrowse link
G Ruvbl1-ps1 RuvB-like AAA ATPase 1, pseudogene 1 involved_in IEA GO_REF:0000043 UniProt GO_REF:0000043 NCBI chr  X:1,640,138...1,641,886
Ensembl chr  X:1,640,300...1,641,811 		JBrowse link
G Ruvbl2 RuvB-like AAA ATPase 2 involved_in IEA GO_REF:0000043 UniProt GO_REF:0000043 NCBI chr 1:95,902,014...95,915,247
Ensembl chr 1:95,901,701...95,915,342 		JBrowse link
G Sirt7 sirtuin 7 involved_in IEA GO_REF:0000043 UniProt GO_REF:0000043 NCBI chr10:106,394,802...106,401,627
Ensembl chr10:105,896,476...105,903,172 		JBrowse link
G Slc25a16 solute carrier family 25 member 16 involved_in IEA GO_REF:0000043 UniProt GO_REF:0000043 NCBI chr20:25,691,474...25,717,558
Ensembl chr20:25,662,055...25,716,319 		JBrowse link
G Slx1b SLX1 homolog B, structure-specific endonuclease subunit involved_in ISO
IEA		 (PMID:19595721), (PMID:19595722), (PMID:19596235), (PMID:19596236)
GO_REF:0000104		 RGD
UniProt		 PMID:19595721 PMID:19595722 PMID:19596235 PMID:19596236 GO_REF:0000104 NCBI chr 1:181,286,190...181,291,739
Ensembl chr 1:181,283,921...181,291,775 		JBrowse link
G Slx4 SLX4 structure-specific endonuclease subunit involved_in ISO (PMID:19595722) RGD PMID:19595722 NCBI chr10:11,526,623...11,549,313
Ensembl chr10:11,528,424...11,549,295 		JBrowse link
G Smarca5 SNF2 related chromatin remodeling ATPase 5 involved_in ISO (PMID:23911928) RGD PMID:23911928 NCBI chr19:27,271,918...27,304,594
Ensembl chr19:27,271,148...27,304,594 		JBrowse link
G Smarcad1 SNF2 related chromatin remodeling ATPase with DExD box 1 involved_in IEA GO_REF:0000043 UniProt GO_REF:0000043 NCBI chr 4:95,639,722...95,709,055
Ensembl chr 4:94,311,489...94,372,563 		JBrowse link
G Smarcal1 SNF2 related chromatin remodeling annealing helicase 1 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr 9:74,239,718...74,286,156
Ensembl chr 9:74,240,241...74,286,146 		JBrowse link
G Smc1a structural maintenance of chromosomes 1A involved_in IEA GO_REF:0000043 UniProt GO_REF:0000043 NCBI chr  X:24,582,732...24,627,462
Ensembl chr  X:21,103,282...21,148,056 		JBrowse link
G Smc3 structural maintenance of chromosomes 3 involved_in IEA GO_REF:0000043 UniProt GO_REF:0000043 NCBI chr 1:252,601,422...252,644,522
Ensembl chr 1:252,601,753...252,644,522 		JBrowse link
G Smug1 single-strand-selective monofunctional uracil-DNA glycosylase 1 IDA RGD PMID:12718542 RGD:2317001 NCBI chr 7:134,288,565...134,302,179
Ensembl chr 7:134,287,675...134,297,226 		JBrowse link
G Sprtn SprT-like N-terminal domain involved_in IEA GO_REF:0000043 UniProt GO_REF:0000043 NCBI chr19:52,857,612...52,864,864
Ensembl chr19:52,857,866...52,864,864 		JBrowse link
G Ssrp1 structure specific recognition protein 1 involved_in IEA GO_REF:0000043 UniProt GO_REF:0000043 NCBI chr 3:70,124,371...70,134,481
Ensembl chr 3:70,118,655...70,134,482 		JBrowse link
G Stub1 STIP1 homology and U-box containing protein 1 involved_in IEA GO_REF:0000043 UniProt GO_REF:0000043 NCBI chr10:15,355,278...15,357,559
Ensembl chr10:14,850,765...14,853,046 		JBrowse link
G Supt16h SPT16 homolog, facilitates chromatin remodeling subunit involved_in IEA GO_REF:0000104 UniProt GO_REF:0000104 NCBI chr15:24,867,697...24,904,818
Ensembl chr15:24,866,489...24,904,846 		JBrowse link
G Swi5 SWI5 homologous recombination repair protein involved_in IEA GO_REF:0000043 UniProt GO_REF:0000043 NCBI chr 3:15,574,687...15,583,760
Ensembl chr 3:15,564,715...15,583,805 		JBrowse link
G Taok1 TAO kinase 1 involved_in IEA GO_REF:0000043 UniProt GO_REF:0000043 NCBI chr10:62,373,072...62,465,295
Ensembl chr10:62,381,404...62,465,766 		JBrowse link
G Taok3 TAO kinase 3 involved_in IEA GO_REF:0000043 UniProt GO_REF:0000043 NCBI chr12:39,312,354...39,473,656
Ensembl chr12:39,314,027...39,461,244 		JBrowse link
G Tdp1 tyrosyl-DNA phosphodiesterase 1 involved_in
acts_upstream_of_or_within		 ISO
IBA
IEA		 (PMID:17948061)
(PMID:21390131)
GO_REF:0000033
GO_REF:0000043		 RGD
GO_Central
UniProt		 PMID:17948061 PMID:21390131 GO_REF:0000033 GO_REF:0000043 NCBI chr 6:119,163,192...119,231,029
Ensembl chr 6:119,163,166...119,231,021 		JBrowse link
G Tfpt TCF3 fusion partner involved_in IEA GO_REF:0000043 UniProt GO_REF:0000043 NCBI chr 1:65,587,633...65,597,407
Ensembl chr 1:65,582,359...65,611,689 		JBrowse link
G Timeless timeless circadian regulator involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr 7:654,804...678,769
Ensembl chr 7:654,822...678,738 		JBrowse link
G Top3a DNA topoisomerase III alpha involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr10:45,419,219...45,457,356
Ensembl chr10:45,419,217...45,457,559 		JBrowse link
G Top3b DNA topoisomerase III beta involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr11:84,097,018...84,125,474
Ensembl chr11:84,097,026...84,125,392 		JBrowse link
G Tp53bp1 tumor protein p53 binding protein 1 acts_upstream_of_or_within ISO (PMID:15364958) RGD PMID:15364958 NCBI chr 3:128,620,320...128,724,716
Ensembl chr 3:108,169,980...108,269,822 		JBrowse link
G Trim28 tripartite motif-containing 28 involved_in ISO (PMID:17178852) RGD PMID:17178852 NCBI chr 1:73,652,441...73,659,388
Ensembl chr 1:73,652,709...73,659,380 		JBrowse link
G Trip12 thyroid hormone receptor interactor 12 involved_in IEA GO_REF:0000043 UniProt GO_REF:0000043 NCBI chr 9:85,916,691...86,043,312
Ensembl chr 9:85,916,691...86,051,403 		JBrowse link
G Ttc5 tetratricopeptide repeat domain 5 involved_in IEA GO_REF:0000043 UniProt GO_REF:0000043 NCBI chr15:23,993,046...24,010,710
Ensembl chr15:23,993,048...24,010,668 		JBrowse link
G Ttf2 transcription termination factor 2 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr 2:188,366,321...188,397,750
Ensembl chr 2:188,366,331...188,397,689 		JBrowse link
G Ube2a ubiquitin-conjugating enzyme E2A involved_in ISO
IBA		 UniProtKB:P06104 (PMID:1717990)
GO_REF:0000033		 RGD
GO_Central		 PMID:1717990 GO_REF:0000033 NCBI chr  X:120,979,993...120,990,773
Ensembl chr  X:116,113,875...116,125,070 		JBrowse link
G Ube2b ubiquitin-conjugating enzyme E2B involved_in ISO
IBA		 UniProtKB:P06104 (PMID:1717990)
GO_REF:0000033		 RGD
GO_Central		 PMID:1717990 GO_REF:0000033 NCBI chr10:36,248,434...36,263,379
Ensembl chr10:36,248,438...36,264,665 		JBrowse link
G Ube2d3 ubiquitin-conjugating enzyme E2D 3 involved_in IEA GO_REF:0000043 UniProt GO_REF:0000043 NCBI chr 2:226,543,194...226,571,001
Ensembl chr 2:223,868,730...223,898,081 		JBrowse link
G Ube2t ubiquitin-conjugating enzyme E2T involved_in ISO (PMID:16916645) RGD PMID:16916645 NCBI chr13:46,403,352...46,413,854
Ensembl chr13:46,403,375...46,414,835 		JBrowse link
G Ube2u ubiquitin conjugating enzyme E2 U involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr 5:115,118,234...115,187,296
Ensembl chr 5:115,118,495...115,186,874 		JBrowse link
G Ube2w ubiquitin-conjugating enzyme E2W involved_in IEA GO_REF:0000043 UniProt GO_REF:0000043 NCBI chr 5:2,690,742...2,754,491
Ensembl chr 5:2,690,763...2,814,965 		JBrowse link
G Ubr5 ubiquitin protein ligase E3 component n-recognin 5 involved_in IEA GO_REF:0000043 UniProt GO_REF:0000043 NCBI chr 7:69,115,216...69,224,843
Ensembl chr 7:69,116,761...69,224,903 		JBrowse link
G Ufl1 Ufm1-specific ligase 1 involved_in IEA GO_REF:0000043 UniProt GO_REF:0000043 NCBI chr 5:43,759,271...43,791,682
Ensembl chr 5:38,962,171...38,995,199 		JBrowse link
G Uhrf1 ubiquitin-like with PHD and ring finger domains 1 involved_in IEA GO_REF:0000043 UniProt GO_REF:0000043 NCBI chr 9:1,133,117...1,154,639
Ensembl chr 9:1,134,909...1,154,631 		JBrowse link
G Ung uracil-DNA glycosylase TAS RGD PMID:12167490 RGD:634481 NCBI chr12:48,145,838...48,154,789
Ensembl chr12:42,485,276...42,494,206 		JBrowse link
G Upf1 UPF1, RNA helicase and ATPase involved_in ISO (PMID:16488880) RGD PMID:16488880 NCBI chr16:19,076,594...19,097,365
Ensembl chr16:19,076,322...19,096,568 		JBrowse link
G Usp1 ubiquitin specific peptidase 1 involved_in IEA GO_REF:0000043 UniProt GO_REF:0000043 NCBI chr 5:113,587,564...113,598,934
Ensembl chr 5:113,587,564...113,598,932 		JBrowse link
G Usp10 ubiquitin specific peptidase 10 involved_in IEA GO_REF:0000043 UniProt GO_REF:0000043 NCBI chr19:47,972,858...48,014,900
Ensembl chr19:47,972,611...48,014,897 		JBrowse link
G Usp28 ubiquitin specific peptidase 28 involved_in IEA GO_REF:0000043 UniProt GO_REF:0000043 NCBI chr 8:49,325,766...49,386,229
Ensembl chr 8:49,325,867...49,386,229 		JBrowse link
G Usp3 ubiquitin specific peptidase 3 involved_in ISO (PMID:17980597) RGD PMID:17980597 NCBI chr 8:67,078,249...67,154,109
Ensembl chr 8:67,079,927...67,154,111 		JBrowse link
G Usp45 ubiquitin specific peptidase 45 acts_upstream_of_or_within ISO (PMID:25538220) RGD PMID:25538220 NCBI chr 5:35,318,621...35,392,090
Ensembl chr 5:35,318,635...35,389,420 		JBrowse link
G Uvrag UV radiation resistance associated involved_in ISO (PMID:22542840) RGD PMID:22542840 NCBI chr 1:162,596,514...162,854,348
Ensembl chr 1:153,185,395...153,442,136 		JBrowse link
G Vcp valosin-containing protein involved_in ISS GO_REF:0000024 UniProt GO_REF:0000024 NCBI chr 5:62,005,984...62,025,387
Ensembl chr 5:57,210,168...57,229,571 		JBrowse link
G Wdhd1 WD repeat and HMG-box DNA binding protein 1 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr15:20,478,310...20,523,106
Ensembl chr15:20,489,291...20,523,096 		JBrowse link
G Wrap53 WD repeat containing, antisense to TP53 involved_in IEA GO_REF:0000043 UniProt GO_REF:0000043 NCBI chr10:54,780,873...54,797,919
Ensembl chr10:54,282,105...54,298,929 		JBrowse link
G Xpa XPA, DNA damage recognition and repair factor involved_in
acts_upstream_of_or_within		 ISO (PMID:1601884)
MGI:1857939 (PMID:11950998), (PMID:9661901)		 RGD PMID:1601884 PMID:9661901 PMID:11950998 NCBI chr 5:65,227,281...65,275,784
Ensembl chr 5:60,431,673...60,475,726 		JBrowse link
G Xpc XPC complex subunit, DNA damage recognition and repair factor acts_upstream_of_or_within ISO MGI:1859840 (PMID:12555660) RGD PMID:12555660 NCBI chr 4:125,550,833...125,578,084
Ensembl chr 4:123,993,666...124,021,010 		JBrowse link
G Xrcc1 X-ray repair cross complementing 1 acts_upstream_of_or_within ISO MGI:3836442 (PMID:19633665) RGD PMID:19633665 NCBI chr 1:89,268,721...89,296,619
Ensembl chr 1:80,141,207...80,168,701 		JBrowse link
G Xrcc2 X-ray repair cross complementing 2 involved_in ISO (PMID:10422536) RGD PMID:10422536 NCBI chr 4:10,157,130...10,237,089
Ensembl chr 4:9,423,898...9,442,482 		JBrowse link
G Xrcc3 X-ray repair cross complementing 3 involved_in ISO (PMID:10422536) RGD PMID:10422536 NCBI chr 6:136,684,558...136,694,822
Ensembl chr 6:130,863,959...130,872,444 		JBrowse link
G Zbtb1 zinc finger and BTB domain containing 1 involved_in ISO (PMID:24657165) RGD PMID:24657165 NCBI chr 6:95,096,838...95,125,811
Ensembl chr 6:95,096,387...95,118,996 		JBrowse link
G Zfp668 zinc finger protein 668 involved_in ISO (PMID:34313816) RGD PMID:34313816 NCBI chr 1:182,474,633...182,484,957
Ensembl chr 1:182,474,633...182,492,878 		JBrowse link
G Zmpste24 zinc metallopeptidase STE24 acts_upstream_of_or_within ISO MGI:1931221|MGI:2180033 (PMID:15980864), (PMID:21746928) RGD PMID:15980864 PMID:21746928 NCBI chr 5:134,627,218...134,660,360
Ensembl chr 5:134,627,229...134,660,110 		JBrowse link
G Zranb3 zinc finger RANBP2-type containing 3 involved_in ISO
IBA		 (PMID:22759634)
GO_REF:0000033		 RGD
GO_Central		 PMID:22759634 GO_REF:0000033 NCBI chr13:39,440,653...39,595,782
Ensembl chr13:39,440,889...39,595,670 		JBrowse link
DNA replication term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G AC129365.1 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 Ensembl chr 2:141,551,434...141,554,016 JBrowse link
G Adra2a adrenoceptor alpha 2A IMP RGD PMID:15351511 RGD:1625185 NCBI chr 1:263,066,780...263,069,580
Ensembl chr 1:253,060,218...253,064,365 		JBrowse link
G Blm BLM RecQ like helicase involved_in ISO
IBA		 (PMID:26195664)
GO_REF:0000033		 RGD
GO_Central		 PMID:26195664 GO_REF:0000033 NCBI chr 1:143,819,072...143,905,300
Ensembl chr 1:134,409,857...134,484,312 		JBrowse link
G Btc betacellulin TAS RGD PMID:14988244 RGD:1357906 NCBI chr14:16,992,668...17,031,178
Ensembl chr14:16,707,982...16,747,049 		JBrowse link
G Chaf1a chromatin assembly factor 1 subunit A involved_in IEA GO_REF:0000043 UniProt GO_REF:0000043 NCBI chr 9:873,953...900,701
Ensembl chr 9:874,051...900,654 		JBrowse link
G Chtf18 chromosome transmission fidelity factor 18 involved_in IEA GO_REF:0000043 UniProt GO_REF:0000043 NCBI chr10:14,743,006...14,751,044
Ensembl chr10:14,742,621...14,751,050 		JBrowse link
G Chtf8 chromosome transmission fidelity factor 8 involved_in IEA GO_REF:0000043 UniProt GO_REF:0000043 NCBI chr19:34,782,005...34,792,306
Ensembl chr19:34,781,856...34,792,578 		JBrowse link
G Dna2 DNA replication helicase/nuclease 2 involved_in ISS GO_REF:0000024 UniProt GO_REF:0000024 NCBI chr20:25,661,652...25,690,598
Ensembl chr20:25,662,055...25,716,319 		JBrowse link
G Dnajc2 DnaJ heat shock protein family (Hsp40) member C2 involved_in
acts_upstream_of_or_within		 IEA
ISO		 GO_REF:0000107
(PMID:7559602)		 Ensembl
RGD		 PMID:7559602 GO_REF:0000107 NCBI chr 4:13,270,239...13,297,438
Ensembl chr 4:13,270,191...13,297,431 		JBrowse link
G Donson DNA replication fork stabilization factor DONSON involved_in ISO (PMID:28191891) RGD PMID:28191891 NCBI chr11:30,919,834...30,933,150
Ensembl chr11:30,923,239...30,932,889 		JBrowse link
G Dscc1 DNA replication and sister chromatid cohesion 1 involved_in IEA GO_REF:0000043 UniProt GO_REF:0000043 NCBI chr 7:86,482,588...86,498,212
Ensembl chr 7:86,482,588...86,498,212 		JBrowse link
G E4f1 E4F transcription factor 1 acts_upstream_of_or_within ISO MGI:3050154 (PMID:15226446) RGD PMID:15226446 NCBI chr10:13,978,975...13,999,646
Ensembl chr10:13,474,456...13,485,974 		JBrowse link
G Fam111a FAM111 trypsin like peptidase A involved_in ISO
IBA		 (PMID:24561620)
GO_REF:0000033		 RGD
GO_Central		 PMID:24561620 GO_REF:0000033 NCBI chr 1:209,640,865...209,656,551
Ensembl chr 1:209,640,953...209,656,547 		JBrowse link
G Fam111al1 FAM111 trypsin like peptidase A like 1 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr 1:209,593,530...209,598,151
Ensembl chr 1:209,596,075...209,598,151 		JBrowse link
G Fen1 flap structure-specific endonuclease 1 acts_upstream_of_or_within ISO MGI:2670036 (PMID:12861020) RGD PMID:12861020 NCBI chr 1:216,270,016...216,274,873
Ensembl chr 1:206,844,884...206,850,003 		JBrowse link
G Fhit fragile histidine triad diadenosine triphosphatase acts_upstream_of_or_within ISO (PMID:15254237) RGD PMID:15254237 NCBI chr15:16,365,401...17,872,901
Ensembl chr15:13,934,995...15,442,340 		JBrowse link
G Gins1 GINS complex subunit 1 acts_upstream_of_or_within ISO MGI:3706309 (PMID:16287864) RGD PMID:16287864 NCBI chr 3:139,724,513...139,745,930
Ensembl chr 3:139,724,490...139,745,936 		JBrowse link
G Gins3 GINS complex subunit 3 acts_upstream_of_or_within ISO (PMID:35603789) RGD PMID:35603789 NCBI chr19:9,420,085...9,428,621
Ensembl chr19:9,420,086...9,428,687 		JBrowse link
G Gmnc geminin coiled-coil domain containing involved_in ISO (PMID:20383140) RGD PMID:20383140 NCBI chr11:73,836,255...73,847,698
Ensembl chr11:73,814,533...73,847,328 		JBrowse link
G Grwd1 glutamate-rich WD repeat containing 1 involved_in ISS
IEA
ISO		 GO_REF:0000024
GO_REF:0000107
(PMID:25990725)		 UniProt
Ensembl
RGD		 PMID:25990725 GO_REF:0000024 GO_REF:0000107 NCBI chr 1:96,301,260...96,306,962
Ensembl chr 1:96,301,261...96,307,201 		JBrowse link
G Helb DNA helicase B involved_in ISO (PMID:12181327) RGD PMID:12181327 NCBI chr 7:55,588,510...55,615,979
Ensembl chr 7:55,588,798...55,615,585 		JBrowse link
G Kat7 lysine acetyltransferase 7 involved_in IEA GO_REF:0000043 UniProt GO_REF:0000043 NCBI chr10:80,718,335...80,752,387
Ensembl chr10:80,221,524...80,255,567 		JBrowse link
G Kin Kin17 DNA and RNA binding protein involved_in ISO
IBA		 (PMID:12359749)
(PMID:8954809)
GO_REF:0000033		 RGD
GO_Central		 PMID:8954809 PMID:12359749 GO_REF:0000033 NCBI chr17:68,413,483...68,431,392
Ensembl chr17:68,413,486...68,423,845 		JBrowse link
G Lig1 DNA ligase 1 acts_upstream_of_or_within
involved_in		 ISO
IEA		 MGI:2179196 (PMID:11896201)
GO_REF:0000043		 RGD
UniProt		 PMID:11896201 GO_REF:0000043 NCBI chr 1:74,165,688...74,204,400
Ensembl chr 1:74,165,842...74,204,413 		JBrowse link
G Lrwd1 leucine-rich repeats and WD repeat domain containing 1 involved_in IEA GO_REF:0000043 UniProt GO_REF:0000043 NCBI chr12:20,530,035...20,543,078
Ensembl chr12:20,530,012...20,549,536 		JBrowse link
G Mcm2 minichromosome maintenance complex component 2 involved_in
acts_upstream_of_or_within		 IBA
ISO		 GO_REF:0000033
(PMID:11568184)		 GO_Central
RGD		 PMID:11568184 GO_REF:0000033 NCBI chr 4:121,346,434...121,360,962
Ensembl chr 4:121,346,434...121,360,847 		JBrowse link
G Mcm4 minichromosome maintenance complex component 4 involved_in
acts_upstream_of_or_within		 IBA
ISO		 GO_REF:0000033
PR:P97311|PR:Q61881 (PMID:15917436)		 GO_Central
RGD		 PMID:15917436 GO_REF:0000033 NCBI chr11:85,258,443...85,272,144
Ensembl chr11:85,258,443...85,272,144 		JBrowse link
G Mcm6 minichromosome maintenance complex component 6 involved_in
acts_upstream_of_or_within		 IEA
ISO		 GO_REF:0000043
PR:P49717|PR:Q61881 (PMID:15917436)		 UniProt
RGD		 PMID:15917436 GO_REF:0000043 NCBI chr13:39,826,745...39,851,937
Ensembl chr13:39,826,763...39,851,960 		JBrowse link
G Mcm7 minichromosome maintenance complex component 7 acts_upstream_of_or_within TAS
ISO		 PR:P49717|PR:P97311 (PMID:15917436) RGD PMID:15917436 PMID:12677008 RGD:1304505 NCBI chr12:17,042,207...17,049,470
Ensembl chr12:17,042,212...17,050,063 		JBrowse link
G Mcm8 minichromosome maintenance 8 homologous recombination repair factor NOT|involved_in ISO UniProtKB:Q9NXL9 (PMID:23401855) RGD PMID:23401855 NCBI chr 3:120,086,741...120,117,008
Ensembl chr 3:120,086,763...120,117,008 		JBrowse link
G Mcm9 minichromosome maintenance 9 homologous recombination repair factor NOT|involved_in ISO
ISS		 UniProtKB:Q9UJA3 (PMID:23401855)
(PMID:21987787), (PMID:23401855)
GO_REF:0000024		 RGD
UniProt		 PMID:21987787 PMID:23401855 GO_REF:0000024 NCBI chr20:32,818,219...32,929,577
Ensembl chr20:32,844,951...32,929,600 		JBrowse link
G Nasp nuclear autoantigenic sperm protein involved_in IEA GO_REF:0000043 UniProt GO_REF:0000043 NCBI chr 5:135,294,599...135,319,992
Ensembl chr 5:130,057,363...130,082,928 		JBrowse link
G Nfia nuclear factor I/A involved_in IEA GO_REF:0000043 UniProt GO_REF:0000043 NCBI chr 5:112,436,655...112,781,878
Ensembl chr 5:112,436,644...112,775,885 		JBrowse link
G Nfib nuclear factor I/B involved_in IEA GO_REF:0000043 UniProt GO_REF:0000043 NCBI chr 5:96,759,208...96,974,001
Ensembl chr 5:96,764,653...96,975,479 		JBrowse link
G Nfic nuclear factor I/C involved_in IEA GO_REF:0000043 UniProt GO_REF:0000043 NCBI chr 7:8,278,210...8,309,936
Ensembl chr 7:8,253,361...8,309,936 		JBrowse link
G Nfix nuclear factor I X involved_in IEA GO_REF:0000043 UniProt GO_REF:0000043 NCBI chr19:23,355,388...23,450,360
Ensembl chr19:23,355,498...23,448,265 		JBrowse link
G Orc1 origin recognition complex, subunit 1 involved_in IEA GO_REF:0000043 UniProt GO_REF:0000043 NCBI chr 5:123,324,273...123,348,375
Ensembl chr 5:123,324,315...123,348,375 		JBrowse link
G Orc2 origin recognition complex, subunit 2 involved_in IEA GO_REF:0000104 UniProt GO_REF:0000104 NCBI chr 9:60,001,631...60,038,301
Ensembl chr 9:60,001,910...60,038,195 		JBrowse link
G Orc3 origin recognition complex, subunit 3 involved_in IEA GO_REF:0000043 UniProt GO_REF:0000043 NCBI chr 5:49,123,758...49,181,552
Ensembl chr 5:49,126,955...49,181,633 		JBrowse link
G Orc4 origin recognition complex, subunit 4 acts_upstream_of_or_within
involved_in		 ISO
IEA		 (PMID:34977916)
GO_REF:0000043		 RGD
UniProt		 PMID:34977916 GO_REF:0000043 NCBI chr 3:33,290,844...33,334,022
Ensembl chr 3:33,294,355...33,333,824 		JBrowse link
G Pclaf PCNA clamp associated factor involved_in ISO
ISS		 (PMID:23000965)
GO_REF:0000024		 RGD
UniProt		 PMID:23000965 GO_REF:0000024 NCBI chr 8:66,420,606...66,432,994
Ensembl chr 8:66,420,587...66,432,994
Ensembl chr 8:66,420,587...66,432,994 		JBrowse link
G Pola1 DNA polymerase alpha 1, catalytic subunit acts_upstream_of_or_within
involved_in		 IMP
ISO
ISS		 (PMID:8106564), (PMID:8125989), (PMID:9584195)
(PMID:16762037), (PMID:31006512), (PMID:3917431), (PMID:4084590)
GO_REF:0000024		 RGD
UniProt		 PMID:3917431 PMID:4084590 PMID:8106564 PMID:8125989 PMID:9584195 More... GO_REF:0000024, RGD:1580606, RGD:2307013 NCBI chr  X:58,034,617...58,348,612
Ensembl chr  X:58,034,619...58,348,536 		JBrowse link
G Pola2 DNA polymerase alpha 2, accessory subunit involved_in
acts_upstream_of_or_within		 TAS
IEA
ISO
IMP		 GO_REF:0000117
(PMID:9584195)		 UniProt
RGD		 PMID:9584195 PMID:11536367 PMID:7503737 GO_REF:0000117, RGD:633584, RGD:2307013 NCBI chr 1:203,227,183...203,251,350
Ensembl chr 1:203,203,388...203,251,348 		JBrowse link
G Polb DNA polymerase beta involved_in IEA GO_REF:0000043 UniProt GO_REF:0000043 NCBI chr16:69,379,438...69,402,710
Ensembl chr16:69,379,400...69,404,812 		JBrowse link
G Pold1 DNA polymerase delta 1, catalytic subunit involved_in IDA
ISO		 (PMID:16762037) RGD PMID:16762037 PMID:10541966 RGD:729526 NCBI chr 1:104,161,984...104,178,074
Ensembl chr 1:95,025,499...95,036,465 		JBrowse link
G Pold2 DNA polymerase delta 2, accessory subunit involved_in IDA
IEA		 GO_REF:0000043 UniProt
RGD		 PMID:10541966 GO_REF:0000043, RGD:729526 NCBI chr14:80,748,971...80,755,188
Ensembl chr14:80,748,974...80,755,160 		JBrowse link
G Pole DNA polymerase epsilon, catalytic subunit involved_in ISO (PMID:16762037) RGD PMID:16762037 NCBI chr12:52,005,155...52,053,761
Ensembl chr12:46,345,420...46,393,939 		JBrowse link
G Poll DNA polymerase lambda involved_in IEA GO_REF:0000043 UniProt GO_REF:0000043 NCBI chr 1:244,400,202...244,408,762
Ensembl chr 1:244,400,204...244,408,662 		JBrowse link
G Prim2 DNA primase subunit 2 NAS RGD PMID:11536367 RGD:633584 NCBI chr 9:35,692,376...35,904,521
Ensembl chr 9:35,692,376...35,903,030 		JBrowse link
G Rbbp4 RB binding protein 4, chromatin remodeling factor involved_in IEA GO_REF:0000043 UniProt GO_REF:0000043 NCBI chr 5:141,655,863...141,675,157
Ensembl chr 5:141,638,421...141,675,284
Ensembl chr 2:141,638,421...141,675,284 		JBrowse link
G Rbbp4-ps2 RB binding protein 4, chromatin remodeling factor, pseudogene 2 involved_in IEA GO_REF:0000043 UniProt GO_REF:0000043 NCBI chr17:50,836,299...50,838,226
Ensembl chr17:50,836,367...50,838,072
Ensembl chr17:50,836,367...50,838,072 		JBrowse link
G Rbbp4l1 RB binding protein 4, chromatin remodeling factor like 1 involved_in IEA GO_REF:0000043 UniProt GO_REF:0000043 NCBI chr 2:153,958,955...153,961,336
Ensembl chr 2:153,958,955...153,960,757 		JBrowse link
G Rbbp7 RB binding protein 7, chromatin remodeling factor involved_in IEA GO_REF:0000043 UniProt GO_REF:0000043 NCBI chr  X:31,913,080...31,931,245
Ensembl chr  X:31,913,081...31,931,226 		JBrowse link
G Rbms1 RNA binding motif, single stranded interacting protein 1 involved_in IEA GO_REF:0000043 UniProt GO_REF:0000043 NCBI chr 3:45,195,828...45,420,406
Ensembl chr 3:45,197,972...45,420,376 		JBrowse link
G Recql RecQ like helicase involved_in IEA
IBA		 GO_REF:0000117
GO_REF:0000033		 UniProt
GO_Central		 GO_REF:0000033 GO_REF:0000117 NCBI chr 4:177,039,351...177,063,968
Ensembl chr 4:175,304,117...175,332,945 		JBrowse link
G Recql4 RecQ like helicase 4 involved_in ISO
IBA		 (PMID:22039056)
GO_REF:0000033		 RGD
GO_Central		 PMID:22039056 GO_REF:0000033 NCBI chr 7:110,304,092...110,311,426
Ensembl chr 7:108,423,455...108,430,619 		JBrowse link
G Recql5 RecQ like helicase 5 involved_in ISO
IBA
IEA
ISS		 (PMID:22013166)
GO_REF:0000033
GO_REF:0000043
GO_REF:0000024		 RGD
GO_Central
UniProt		 PMID:22013166 GO_REF:0000024 GO_REF:0000033 GO_REF:0000043 NCBI chr10:101,126,544...101,165,739
Ensembl chr10:101,126,547...101,165,652 		JBrowse link
G Rev3l REV3 like, DNA directed polymerase zeta catalytic subunit involved_in IEA GO_REF:0000043 UniProt GO_REF:0000043 NCBI chr20:43,131,841...43,290,102
Ensembl chr20:43,132,363...43,290,099 		JBrowse link
G Rfc2 replication factor C subunit 2 involved_in IEA GO_REF:0000043 UniProt GO_REF:0000043 NCBI chr12:22,120,449...22,133,576
Ensembl chr12:22,120,010...22,133,557 		JBrowse link
G Rfc3 replication factor C subunit 3 involved_in ISO (PMID:9488738) RGD PMID:9488738 NCBI chr12:1,000,987...1,011,778
Ensembl chr12:1,000,994...1,011,778 		JBrowse link
G Rmi1 RecQ mediated genome instability 1 involved_in IEA GO_REF:0000043 UniProt GO_REF:0000043 NCBI chr17:6,256,533...6,264,523
Ensembl chr17:6,256,450...6,264,695 		JBrowse link
G Rpa1 replication protein A1 involved_in IC
IBA
ISO		 GO_REF:0000033
(PMID:9430682)		 GO_Central
RGD		 PMID:9430682 PMID:7503737 GO_REF:0000033, RGD:2307013 NCBI chr10:60,148,869...60,199,970
Ensembl chr10:60,148,793...60,199,949 		JBrowse link
G Rpa2 replication protein A2 involved_in IC
IEA
IBA
ISS
ISO		 GO_REF:0000002
GO_REF:0000033
GO_REF:0000024
(PMID:2406247), (PMID:9430682)		 InterPro
GO_Central
UniProt
RGD		 PMID:2406247 PMID:9430682 PMID:7503737 GO_REF:0000002 GO_REF:0000024 GO_REF:0000033, RGD:2307013 NCBI chr 5:144,976,789...144,989,445
Ensembl chr 5:144,976,748...144,987,350 		JBrowse link
G Rpa3 replication protein A3 involved_in IC
IBA
ISO		 GO_REF:0000033
(PMID:9430682)		 GO_Central
RGD		 PMID:9430682 PMID:7503737 GO_REF:0000033, RGD:2307013 NCBI chr 4:36,304,649...36,307,755
Ensembl chr 4:36,304,651...36,307,709 		JBrowse link
G Rpa3l1 replication protein A3 like 1 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr12:45,908,653...45,909,063
Ensembl chr12:45,908,683...45,909,048 		JBrowse link
G Rtel1 regulator of telomere elongation helicase 1 involved_in IEA GO_REF:0000002 InterPro GO_REF:0000002 NCBI chr 3:168,427,247...168,465,349
Ensembl chr 3:168,419,579...168,465,348 		JBrowse link
G Sde2 SDE2 telomere maintenance homolog involved_in IEA GO_REF:0000043 UniProt GO_REF:0000043 NCBI chr13:92,578,843...92,595,142
Ensembl chr13:92,578,874...92,595,140 		JBrowse link
G Sin3a SIN3 transcription regulator family member A acts_upstream_of_or_within ISO MGI:3583656 (PMID:15998811) RGD PMID:15998811 NCBI chr 8:66,377,471...66,432,150
Ensembl chr 8:57,481,573...57,536,192 		JBrowse link
G Slc25a16 solute carrier family 25 member 16 involved_in ISS GO_REF:0000024 UniProt GO_REF:0000024 NCBI chr20:25,691,474...25,717,558
Ensembl chr20:25,662,055...25,716,319 		JBrowse link
G Slx4 SLX4 structure-specific endonuclease subunit involved_in IEA GO_REF:0000002 InterPro GO_REF:0000002 NCBI chr10:11,526,623...11,549,313
Ensembl chr10:11,528,424...11,549,295 		JBrowse link
G Ssbp1 single stranded DNA binding protein 1 involved_in IEA
IBA		 GO_REF:0000043
GO_REF:0000033		 UniProt
GO_Central		 GO_REF:0000033 GO_REF:0000043 NCBI chr 4:69,266,024...69,276,135
Ensembl chr 4:69,266,102...69,276,135 		JBrowse link
G Ssrp1 structure specific recognition protein 1 involved_in IEA GO_REF:0000043 UniProt GO_REF:0000043 NCBI chr 3:70,124,371...70,134,481
Ensembl chr 3:70,118,655...70,134,482 		JBrowse link
G Supt16h SPT16 homolog, facilitates chromatin remodeling subunit involved_in IEA GO_REF:0000043 UniProt GO_REF:0000043 NCBI chr15:24,867,697...24,904,818
Ensembl chr15:24,866,489...24,904,846 		JBrowse link
G Tbrg1 transforming growth factor beta regulator 1 involved_in ISO (PMID:17110379) RGD PMID:17110379 NCBI chr 8:37,355,274...37,362,933
Ensembl chr 8:37,354,658...37,362,930 		JBrowse link
G Ticrr TOPBP1-interacting checkpoint and replication regulator involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr 1:133,597,618...133,639,513
Ensembl chr 1:133,597,716...133,639,523 		JBrowse link
G Top1 DNA topoisomerase I involved_in
acts_upstream_of_or_within		 IEA
ISO
IBA		 GO_REF:0000107
(PMID:11756244)
GO_REF:0000033		 Ensembl
RGD
GO_Central		 PMID:11756244 GO_REF:0000033 GO_REF:0000107 NCBI chr 3:169,713,195...169,796,330
Ensembl chr 3:149,293,403...149,376,623 		JBrowse link
G Top1mt DNA topoisomerase I mitochondrial involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr 7:107,338,092...107,368,125
Ensembl chr 7:107,342,527...107,366,049 		JBrowse link
G Trex1 three prime repair exonuclease 1 acts_upstream_of_or_within ISO (PMID:20511593) RGD PMID:20511593 NCBI chr 8:109,706,613...109,707,913
Ensembl chr 8:109,706,613...109,708,796 		JBrowse link
G Twnk twinkle mtDNA helicase acts_upstream_of_or_within ISO (PMID:11431692) RGD PMID:11431692 NCBI chr 1:253,817,074...253,823,958
Ensembl chr 1:243,868,330...243,874,802 		JBrowse link
G Upf1 UPF1, RNA helicase and ATPase involved_in ISO (PMID:16488880) RGD PMID:16488880 NCBI chr16:19,076,594...19,097,365
Ensembl chr16:19,076,322...19,096,568 		JBrowse link
G Wrn WRN RecQ like helicase involved_in
acts_upstream_of_or_within		 ISO
IBA		 (PMID:12882351)
GO_REF:0000033
(PMID:26195664)
MGI:2156622 (PMID:9789047)		 RGD
GO_Central		 PMID:9789047 PMID:12882351 PMID:26195664 GO_REF:0000033 NCBI chr16:65,466,552...65,602,951
Ensembl chr16:58,763,504...58,895,450 		JBrowse link
G Wrnip1 WRN helicase interacting protein 1 involved_in IEA GO_REF:0000002 InterPro GO_REF:0000002 NCBI chr17:31,621,410...31,641,659
Ensembl chr17:31,621,411...31,641,659 		JBrowse link
G Zpr1 ZPR1 zinc finger acts_upstream_of_or_within_positive_effect ISO (PMID:17068332) RGD PMID:17068332 NCBI chr 8:46,564,898...46,574,719
Ensembl chr 8:46,565,146...46,574,719 		JBrowse link
DNA replication initiation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ccne1 cyclin E1 involved_in
acts_upstream_of_or_within		 IEA
ISO		 GO_REF:0000107
MGI:2675473 (PMID:12941272)		 Ensembl
RGD		 PMID:12941272 GO_REF:0000107 NCBI chr 1:99,918,672...99,927,986
Ensembl chr 1:90,781,949...90,791,101 		JBrowse link
G Ccne2 cyclin E2 acts_upstream_of_or_within ISO MGI:2675474 (PMID:12941272) RGD PMID:12941272 NCBI chr 5:29,082,169...29,094,879
Ensembl chr 5:24,284,922...24,297,632 		JBrowse link
G Cdc45 cell division cycle 45 involved_in IEA GO_REF:0000002 InterPro GO_REF:0000002 NCBI chr11:82,185,427...82,210,630
Ensembl chr11:82,185,473...82,210,619 		JBrowse link
G Cdc6 cell division cycle 6 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr10:83,864,189...83,878,011
Ensembl chr10:83,864,638...83,878,011 		JBrowse link
G Mcm10 minichromosome maintenance 10 replication initiation factor involved_in ISO
IBA		 (PMID:32865517)
GO_REF:0000033		 RGD
GO_Central		 PMID:32865517 GO_REF:0000033 NCBI chr17:73,263,788...73,288,346
Ensembl chr17:73,266,095...73,287,364 		JBrowse link
G Mcm2 minichromosome maintenance complex component 2 involved_in ISO (PMID:16899510) RGD PMID:16899510 NCBI chr 4:121,346,434...121,360,962
Ensembl chr 4:121,346,434...121,360,847 		JBrowse link
G Mcm5 minichromosome maintenance complex component 5 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr19:13,483,030...13,504,389
Ensembl chr19:13,483,066...13,504,389 		JBrowse link
G Mcm6 minichromosome maintenance complex component 6 involved_in IEA GO_REF:0000104 UniProt GO_REF:0000104 NCBI chr13:39,826,745...39,851,937
Ensembl chr13:39,826,763...39,851,960 		JBrowse link
G Mcm7 minichromosome maintenance complex component 7 involved_in IEA GO_REF:0000002 InterPro GO_REF:0000002 NCBI chr12:17,042,207...17,049,470
Ensembl chr12:17,042,212...17,050,063 		JBrowse link
G Noc3l NOC3-like DNA replication regulator involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr 1:236,556,037...236,585,372
Ensembl chr 1:236,556,789...236,585,318 		JBrowse link
G Orc1 origin recognition complex, subunit 1 involved_in ISO
IBA
IEA		 (PMID:16549788)
GO_REF:0000033
GO_REF:0000107		 RGD
GO_Central
Ensembl		 PMID:16549788 GO_REF:0000033 GO_REF:0000107 NCBI chr 5:123,324,273...123,348,375
Ensembl chr 5:123,324,315...123,348,375 		JBrowse link
G Orc2 origin recognition complex, subunit 2 involved_in ISO (PMID:16549788) RGD PMID:16549788 NCBI chr 9:60,001,631...60,038,301
Ensembl chr 9:60,001,910...60,038,195 		JBrowse link
G Orc3 origin recognition complex, subunit 3 involved_in ISO
IBA
IEA		 (PMID:16549788)
GO_REF:0000033
GO_REF:0000107		 RGD
GO_Central
Ensembl		 PMID:16549788 GO_REF:0000033 GO_REF:0000107 NCBI chr 5:49,123,758...49,181,552
Ensembl chr 5:49,126,955...49,181,633 		JBrowse link
G Orc4 origin recognition complex, subunit 4 involved_in ISS
IBA
ISO
IEA		 GO_REF:0000024
GO_REF:0000033
(PMID:16549788), (PMID:9353276)
GO_REF:0000107		 UniProt
GO_Central
RGD
Ensembl		 PMID:9353276 PMID:16549788 GO_REF:0000024 GO_REF:0000033 GO_REF:0000107 NCBI chr 3:33,290,844...33,334,022
Ensembl chr 3:33,294,355...33,333,824 		JBrowse link
G Orc5 origin recognition complex, subunit 5 involved_in ISO (PMID:16549788) RGD PMID:16549788 NCBI chr 4:12,548,007...12,612,611
Ensembl chr 4:12,548,007...12,612,568 		JBrowse link
G Orc6 origin recognition complex, subunit 6 involved_in ISO
IBA		 (PMID:16549788)
GO_REF:0000033		 RGD
GO_Central		 PMID:16549788 GO_REF:0000033 NCBI chr19:21,757,867...21,765,638
Ensembl chr19:21,757,866...21,765,662 		JBrowse link
G Pola1 DNA polymerase alpha 1, catalytic subunit involved_in ISS
ISO		 GO_REF:0000024
(PMID:10523676)
GO_REF:0000114
(PMID:2175912), (PMID:26975377)		 UniProt
RGD
ComplexPortal		 PMID:2175912 PMID:10523676 PMID:26975377 GO_REF:0000024 GO_REF:0000114 NCBI chr  X:58,034,617...58,348,612
Ensembl chr  X:58,034,619...58,348,536 		JBrowse link
G Pola2 DNA polymerase alpha 2, accessory subunit involved_in ISO
IBA
IEA		 (PMID:26975377)
(PMID:10523676)
GO_REF:0000033
GO_REF:0000114
GO_REF:0000107		 RGD
GO_Central
ComplexPortal
Ensembl		 PMID:10523676 PMID:26975377 GO_REF:0000033 GO_REF:0000107 GO_REF:0000114 NCBI chr 1:203,227,183...203,251,350
Ensembl chr 1:203,203,388...203,251,348 		JBrowse link
G Prim1 DNA primase subunit 1 involved_in ISO (PMID:26975377)
(PMID:10523676)		 RGD PMID:10523676 PMID:26975377 NCBI chr 7:446,342...462,526
Ensembl chr 7:431,805...462,526 		JBrowse link
G Prim2 DNA primase subunit 2 involved_in ISO
IBA		 (PMID:26975377)
(PMID:10523676)
GO_REF:0000033
GO_REF:0000114		 RGD
GO_Central
ComplexPortal		 PMID:10523676 PMID:26975377 GO_REF:0000033 GO_REF:0000114 NCBI chr 9:35,692,376...35,904,521
Ensembl chr 9:35,692,376...35,903,030 		JBrowse link
G Topbp1 DNA topoisomerase II binding protein 1 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr 8:103,887,805...103,931,662
Ensembl chr 8:103,887,865...103,931,674 		JBrowse link
DNA replication preinitiation complex assembly term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Cdt1 chromatin licensing and DNA replication factor 1 involved_in ISO
IBA		 (PMID:11125146)
GO_REF:0000033		 RGD
GO_Central		 PMID:11125146 GO_REF:0000033 NCBI chr19:50,620,713...50,625,659
Ensembl chr19:50,620,713...50,625,659 		JBrowse link
G Gmnn geminin, DNA replication inhibitor involved_in ISO (PMID:11125146) RGD PMID:11125146 NCBI chr17:40,301,771...40,310,054
Ensembl chr17:40,301,808...40,310,054 		JBrowse link
DNA replication proofreading term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Pold1 DNA polymerase delta 1, catalytic subunit involved_in
acts_upstream_of_or_within		 IEA
ISO
IBA		 GO_REF:0000107
MGI:2447628 (PMID:12429860)
GO_REF:0000033		 Ensembl
RGD
GO_Central		 PMID:12429860 GO_REF:0000033 GO_REF:0000107 NCBI chr 1:104,161,984...104,178,074
Ensembl chr 1:95,025,499...95,036,465 		JBrowse link
G Pole DNA polymerase epsilon, catalytic subunit involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr12:52,005,155...52,053,761
Ensembl chr12:46,345,420...46,393,939 		JBrowse link
G Polg DNA polymerase gamma, catalytic subunit involved_in IEA
ISO
ISS		 GO_REF:0000107
(PMID:11897778), (PMID:37202477)
GO_REF:0000024		 Ensembl
RGD
UniProt		 PMID:11897778 PMID:37202477 GO_REF:0000024 GO_REF:0000107 NCBI chr 1:142,792,119...142,808,933
Ensembl chr 1:133,382,766...133,398,567 		JBrowse link
DNA replication, Okazaki fragment processing term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Dna2 DNA replication helicase/nuclease 2 involved_in IEA
ISS		 GO_REF:0000104
GO_REF:0000024		 UniProt GO_REF:0000024 GO_REF:0000104 NCBI chr20:25,661,652...25,690,598
Ensembl chr20:25,662,055...25,716,319 		JBrowse link
G Slc25a16 solute carrier family 25 member 16 involved_in IEA
ISS		 GO_REF:0000104
GO_REF:0000024		 UniProt GO_REF:0000024 GO_REF:0000104 NCBI chr20:25,691,474...25,717,558
Ensembl chr20:25,662,055...25,716,319 		JBrowse link
DNA replication, removal of RNA primer term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Dna2 DNA replication helicase/nuclease 2 involved_in IEA GO_REF:0000107 Ensembl GO_REF:0000107 NCBI chr20:25,661,652...25,690,598
Ensembl chr20:25,662,055...25,716,319 		JBrowse link
G Fen1 flap structure-specific endonuclease 1 involved_in ISO (PMID:18995831) RGD PMID:18995831 NCBI chr 1:216,270,016...216,274,873
Ensembl chr 1:206,844,884...206,850,003 		JBrowse link
G Rnaseh1 ribonuclease H1 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr 6:45,282,849...45,292,258
Ensembl chr 6:45,282,854...45,292,236 		JBrowse link
G Rnaseh2a ribonuclease H2, subunit A involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr19:23,186,325...23,196,045
Ensembl chr19:23,186,383...23,196,041 		JBrowse link
DNA replication, synthesis of primer term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Helb DNA helicase B involved_in ISO (PMID:12181327) RGD PMID:12181327 NCBI chr 7:55,588,510...55,615,979
Ensembl chr 7:55,588,798...55,615,585 		JBrowse link
G Pola1 DNA polymerase alpha 1, catalytic subunit involved_in ISO
IEA
ISS		 (PMID:2175912), (PMID:27019227), (PMID:8026492)
(PMID:8026492)
GO_REF:0000107
GO_REF:0000024		 RGD
Ensembl
UniProt		 PMID:2175912 PMID:8026492 PMID:27019227 GO_REF:0000024 GO_REF:0000107 NCBI chr  X:58,034,617...58,348,612
Ensembl chr  X:58,034,619...58,348,536 		JBrowse link
G Pola2 DNA polymerase alpha 2, accessory subunit involved_in ISO
IEA		 (PMID:8026492)
GO_REF:0000107		 RGD
Ensembl		 PMID:8026492 GO_REF:0000107 NCBI chr 1:203,227,183...203,251,350
Ensembl chr 1:203,203,388...203,251,348 		JBrowse link
G Polrmt RNA polymerase mitochondrial involved_in IEA GO_REF:0000108 GOC GO_REF:0000108 NCBI chr 7:9,959,532...9,969,791
Ensembl chr 7:9,959,576...9,969,791 		JBrowse link
G Prim1 DNA primase subunit 1 involved_in ISO
IBA		 (PMID:26975377), (PMID:8026492)
GO_REF:0000033
(PMID:8026492)		 RGD
GO_Central		 PMID:8026492 PMID:26975377 GO_REF:0000033 NCBI chr 7:446,342...462,526
Ensembl chr 7:431,805...462,526 		JBrowse link
G Prim2 DNA primase subunit 2 involved_in ISO
IBA
IEA		 (PMID:8026492)
GO_REF:0000033
GO_REF:0000043		 RGD
GO_Central
UniProt		 PMID:8026492 GO_REF:0000033 GO_REF:0000043 NCBI chr 9:35,692,376...35,904,521
Ensembl chr 9:35,692,376...35,903,030 		JBrowse link
G Primpol primase and DNA directed polymerase involved_in IEA GO_REF:0000002 InterPro GO_REF:0000002 NCBI chr16:45,681,252...45,715,758
Ensembl chr16:45,681,326...45,715,565 		JBrowse link
DNA strand displacement term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Rtel1 regulator of telomere elongation helicase 1 involved_in ISO (PMID:22579284) RGD PMID:22579284 NCBI chr 3:168,427,247...168,465,349
Ensembl chr 3:168,419,579...168,465,348 		JBrowse link
DNA strand elongation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Tert telomerase reverse transcriptase involved_in ISO (PMID:16043710) RGD PMID:16043710 NCBI chr 1:31,465,766...31,488,650
Ensembl chr 1:29,637,506...29,659,561 		JBrowse link
DNA strand elongation involved in DNA replication term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G AC129365.1 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 Ensembl chr 2:141,551,434...141,554,016 JBrowse link
G Mcm3 minichromosome maintenance complex component 3 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr 9:23,219,169...23,237,314
Ensembl chr 9:23,219,169...23,237,314 		JBrowse link
G Mcm4 minichromosome maintenance complex component 4 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr11:85,258,443...85,272,144
Ensembl chr11:85,258,443...85,272,144 		JBrowse link
G Pola1 DNA polymerase alpha 1, catalytic subunit involved_in ISS
ISO		 GO_REF:0000024
(PMID:4084590)		 UniProt
RGD		 PMID:4084590 GO_REF:0000024 NCBI chr  X:58,034,617...58,348,612
Ensembl chr  X:58,034,619...58,348,536 		JBrowse link
G Pold2 DNA polymerase delta 2, accessory subunit involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr14:80,748,971...80,755,188
Ensembl chr14:80,748,974...80,755,160 		JBrowse link
G Pold3 DNA polymerase delta 3, accessory subunit involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr 1:154,417,893...154,456,687
Ensembl chr 1:154,418,084...154,456,665 		JBrowse link
DNA strand invasion term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Dmc1 DNA meiotic recombinase 1 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr 7:111,124,888...111,167,465
Ensembl chr 7:111,124,888...111,167,952 		JBrowse link
G Rad51d RAD51 paralog D involved_in ISO (PMID:11834724) RGD PMID:11834724 NCBI chr10:68,303,350...68,322,002
Ensembl chr10:67,740,712...67,824,434 		JBrowse link
G RFFL ring finger and FYVE like domain containing E3 ubiquitin protein ligase involved_in IEA
IBA		 Ensembl
GO_Central		 GO_REF:0000033 GO_REF:0000107
G Xrcc2 X-ray repair cross complementing 2 involved_in ISO
IBA		 (PMID:11834724)
GO_REF:0000033		 RGD
GO_Central		 PMID:11834724 GO_REF:0000033 NCBI chr 4:10,157,130...10,237,089
Ensembl chr 4:9,423,898...9,442,482 		JBrowse link
DNA strand resection involved in replication fork processing term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Exo1 exonuclease 1 involved_in ISO (PMID:26240375) RGD PMID:26240375 NCBI chr13:90,341,947...90,366,861
Ensembl chr13:87,809,810...87,834,654 		JBrowse link
G Mre11 MRE11 homolog, double strand break repair nuclease involved_in ISS
ISO
IEA		 GO_REF:0000024
(PMID:18854157)
(PMID:27814491), (PMID:27889449), (PMID:29670289), (PMID:30464262), (PMID:30612738), (PMID:30787182), (PMID:37696958)
GO_REF:0000107		 UniProt
RGD
Ensembl		 PMID:18854157 PMID:27814491 PMID:27889449 PMID:29670289 PMID:30464262 More... GO_REF:0000024 GO_REF:0000107 NCBI chr 8:19,900,211...19,961,906
Ensembl chr 8:11,632,354...11,678,279 		JBrowse link
G Nbn nibrin involved_in IEA
ISO		 GO_REF:0000107
(PMID:27814491), (PMID:27889449), (PMID:30787182)		 Ensembl
RGD		 PMID:27814491 PMID:27889449 PMID:30787182 GO_REF:0000107 NCBI chr 5:34,256,678...34,291,163
Ensembl chr 5:29,459,457...29,494,150 		JBrowse link
G Rad50 RAD50 double strand break repair protein involved_in IEA
ISO		 GO_REF:0000107
(PMID:27889449)		 Ensembl
RGD		 PMID:27889449 GO_REF:0000107 NCBI chr10:38,310,147...38,362,100
Ensembl chr10:37,808,726...37,861,396 		JBrowse link
G Rbbp8 RB binding protein 8, endonuclease involved_in ISO (PMID:23273981), (PMID:27814491), (PMID:27889449), (PMID:30787182) RGD PMID:23273981 PMID:27814491 PMID:27889449 PMID:30787182 NCBI chr18:2,922,985...2,988,851
Ensembl chr18:2,921,286...2,988,846 		JBrowse link
G Samhd1 SAM and HD domain containing deoxynucleoside triphosphate triphosphohydrolase 1 involved_in ISO (PMID:28834754), (PMID:29670289) RGD PMID:28834754 PMID:29670289 NCBI chr 3:145,761,549...145,794,420
Ensembl chr 3:145,761,558...145,794,386 		JBrowse link
DNA synthesis involved in DNA repair term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Cdkn2d cyclin dependent kinase inhibitor 2D involved_in ISO (PMID:15750620) RGD PMID:15750620 NCBI chr 8:19,831,874...19,834,640
Ensembl chr 8:19,831,866...19,834,674 		JBrowse link
G Hrob homologous recombination factor with OB-fold involved_in ISS
IEA
ISO		 GO_REF:0000024
GO_REF:0000107
(PMID:31467087)		 UniProt
Ensembl
RGD		 PMID:31467087 GO_REF:0000024 GO_REF:0000107 NCBI chr10:87,705,846...87,722,635
Ensembl chr10:87,206,049...87,222,483 		JBrowse link
G Pola1 DNA polymerase alpha 1, catalytic subunit involved_in ISO (PMID:11470886) RGD PMID:11470886 NCBI chr  X:58,034,617...58,348,612
Ensembl chr  X:58,034,619...58,348,536 		JBrowse link
G Pold1 DNA polymerase delta 1, catalytic subunit involved_in ISS
ISO		 GO_REF:0000024
(PMID:1730053), (PMID:24191025), (PMID:3335506)		 UniProt
RGD		 PMID:1730053 PMID:3335506 PMID:24191025 GO_REF:0000024 NCBI chr 1:104,161,984...104,178,074
Ensembl chr 1:95,025,499...95,036,465 		JBrowse link
G Pold4 DNA polymerase delta 4, accessory subunit involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr 1:201,526,591...201,528,406
Ensembl chr 1:201,526,665...201,528,401 		JBrowse link
G Pole DNA polymerase epsilon, catalytic subunit involved_in ISO (PMID:1730053) RGD PMID:1730053 NCBI chr12:52,005,155...52,053,761
Ensembl chr12:46,345,420...46,393,939 		JBrowse link
G Polh DNA polymerase eta involved_in ISO (PMID:17563354) RGD PMID:17563354 NCBI chr 9:14,778,355...14,813,210
Ensembl chr 9:14,777,888...14,812,723 		JBrowse link
G Sirt1 sirtuin 1 involved_in IEA
ISO		 GO_REF:0000107
(PMID:17612497)		 Ensembl
RGD		 PMID:17612497 GO_REF:0000107 NCBI chr20:25,305,953...25,328,000
Ensembl chr20:25,306,917...25,329,260 		JBrowse link
G Wrn WRN RecQ like helicase involved_in ISO (PMID:17563354) RGD PMID:17563354 NCBI chr16:65,466,552...65,602,951
Ensembl chr16:58,763,504...58,895,450 		JBrowse link
G Wrnip1 WRN helicase interacting protein 1 involved_in ISS
IBA
IEA
ISO		 GO_REF:0000024
GO_REF:0000033
GO_REF:0000107
(PMID:15670210)		 UniProt
GO_Central
Ensembl
RGD		 PMID:15670210 GO_REF:0000024 GO_REF:0000033 GO_REF:0000107 NCBI chr17:31,621,410...31,641,659
Ensembl chr17:31,621,411...31,641,659 		JBrowse link
DNA synthesis involved in mitotic DNA replication term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Cdk2 cyclin dependent kinase 2 IMP RGD PMID:15696186 RGD:2301349 NCBI chr 7:1,714,392...1,721,964
Ensembl chr 7:1,129,811...1,137,403 		JBrowse link
G Tk1 thymidine kinase 1 involved_in ISO (PMID:14697231) RGD PMID:14697231 NCBI chr10:103,533,449...103,544,818
Ensembl chr10:103,031,521...103,046,920 		JBrowse link
DNA synthesis involved in UV-damage excision repair term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Pola1 DNA polymerase alpha 1, catalytic subunit NOT|involved_in ISO
ISS		 (PMID:1730053)
GO_REF:0000024		 RGD
UniProt		 PMID:1730053 GO_REF:0000024 NCBI chr  X:58,034,617...58,348,612
Ensembl chr  X:58,034,619...58,348,536 		JBrowse link
G Pold3 DNA polymerase delta 3, accessory subunit involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr 1:154,417,893...154,456,687
Ensembl chr 1:154,418,084...154,456,665 		JBrowse link
G Trex1 three prime repair exonuclease 1 acts_upstream_of_or_within ISO MGI:3052754 (PMID:23993650) RGD PMID:23993650 NCBI chr 8:109,706,613...109,707,913
Ensembl chr 8:109,706,613...109,708,796 		JBrowse link
DNA topological change term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ercc3 ERCC excision repair 3, TFIIH core complex helicase subunit involved_in ISO (PMID:8663148) RGD PMID:8663148 NCBI chr18:24,157,831...24,188,543
Ensembl chr18:23,883,580...23,914,329 		JBrowse link
G Hmgb2 high mobility group box 2 involved_in ISO
ISS		 (PMID:11275566)
GO_REF:0000024		 RGD
AgBase		 PMID:11275566 GO_REF:0000024 NCBI chr16:37,721,374...37,723,950
Ensembl chr16:32,710,658...32,713,140
Ensembl chr 1:32,710,658...32,713,140 		JBrowse link
G Hmgb2l1 high mobility group box 2-like 1 involved_in ISS GO_REF:0000024 AgBase GO_REF:0000024 NCBI chr11:47,252,583...47,253,646
Ensembl chr11:47,252,569...47,253,669
Ensembl chr 1:47,252,569...47,253,669 		JBrowse link
G Hmgb2l2 high mobility group box 2 like 2 involved_in ISS GO_REF:0000024 AgBase GO_REF:0000024 NCBI chr14:69,045,590...69,046,623
Ensembl chr14:69,045,641...69,046,640
Ensembl chr 1:69,045,641...69,046,640 		JBrowse link
G Top1 DNA topoisomerase I acts_upstream_of_or_within
involved_in		 IDA
ISO
IBA
IEA		 (PMID:16261531), (PMID:7842491)
GO_REF:0000033
GO_REF:0000104
(PMID:14594810), (PMID:14654701), (PMID:8567649), (PMID:8631793), (PMID:8631794), (PMID:9611241)		 RGD
GO_Central
UniProt		 PMID:7842491 PMID:8567649 PMID:8631793 PMID:8631794 PMID:9611241 More... GO_REF:0000033 GO_REF:0000104, RGD:1580856 NCBI chr 3:169,713,195...169,796,330
Ensembl chr 3:149,293,403...149,376,623 		JBrowse link
G Top1mt DNA topoisomerase I mitochondrial involved_in IEA
IBA		 GO_REF:0000104
GO_REF:0000033		 UniProt
GO_Central		 GO_REF:0000033 GO_REF:0000104 NCBI chr 7:107,338,092...107,368,125
Ensembl chr 7:107,342,527...107,366,049 		JBrowse link
G Top2a DNA topoisomerase II alpha involved_in
acts_upstream_of_or_within		 IDA
ISO
IEA		 (PMID:22323612)
(PMID:1331984), (PMID:9224616)
GO_REF:0000104		 RGD
UniProt		 PMID:1331984 PMID:9224616 PMID:22323612 PMID:11334111 GO_REF:0000104, RGD:1580614 NCBI chr10:84,441,954...84,473,093
Ensembl chr10:83,945,735...83,976,874 		JBrowse link
G Top2b DNA topoisomerase II beta involved_in ISO (PMID:10684600) RGD PMID:10684600 NCBI chr15:9,051,340...9,111,721
Ensembl chr15:9,051,341...9,112,085 		JBrowse link
G Top3a DNA topoisomerase III alpha involved_in ISO
IBA		 (PMID:20445207)
GO_REF:0000033		 RGD
GO_Central		 PMID:20445207 GO_REF:0000033 NCBI chr10:45,419,219...45,457,356
Ensembl chr10:45,419,217...45,457,559 		JBrowse link
G Top3b DNA topoisomerase III beta involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr11:84,097,018...84,125,474
Ensembl chr11:84,097,026...84,125,392 		JBrowse link
DNA-templated DNA replication term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Baz1a bromodomain adjacent to zinc finger domain, 1A involved_in ISO (PMID:12434153) RGD PMID:12434153 NCBI chr 6:72,389,701...72,512,516
Ensembl chr 6:72,389,703...72,512,459 		JBrowse link
G Chrac1 chromatin accessibility complex subunit 1 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr 7:105,013,047...105,016,435
Ensembl chr 7:105,013,015...105,017,136 		JBrowse link
G Gins2 GINS complex subunit 2 involved_in IEA GO_REF:0000117 UniProt GO_REF:0000117 NCBI chr19:48,626,770...48,639,523
Ensembl chr19:48,626,770...48,639,339 		JBrowse link
G Gins4 GINS complex subunit 4 involved_in IEA GO_REF:0000002 InterPro GO_REF:0000002 NCBI chr16:68,787,572...68,799,938
Ensembl chr16:68,767,339...68,802,273 		JBrowse link
G Haus3 HAUS augmin-like complex, subunit 3 involved_in IEA GO_REF:0000002 InterPro GO_REF:0000002 NCBI chr14:76,580,549...76,599,542
Ensembl chr14:76,580,546...76,752,463 		JBrowse link
G Helb DNA helicase B acts_upstream_of_or_within ISO (PMID:11557815) RGD PMID:11557815 NCBI chr 7:55,588,510...55,615,979
Ensembl chr 7:55,588,798...55,615,585 		JBrowse link
G Mcmbp minichromosome maintenance complex binding protein involved_in ISS
IBA
IEA
ISO		 GO_REF:0000024
GO_REF:0000033
GO_REF:0000107
(PMID:21196493)		 UniProt
GO_Central
Ensembl
RGD		 PMID:21196493 GO_REF:0000024 GO_REF:0000033 GO_REF:0000107 NCBI chr 1:183,270,598...183,316,975
Ensembl chr 1:183,271,980...183,316,975 		JBrowse link
G Orc6 origin recognition complex, subunit 6 acts_upstream_of_or_within ISO (PMID:20219456) RGD PMID:20219456 NCBI chr19:21,757,867...21,765,638
Ensembl chr19:21,757,866...21,765,662 		JBrowse link
G Pold1 DNA polymerase delta 1, catalytic subunit involved_in IDA
IBA
ISO
IMP		 GO_REF:0000033
GO_REF:0000114
(PMID:20334433)		 GO_Central
ComplexPortal
RGD		 PMID:20334433 PMID:9620226 PMID:7503737 GO_REF:0000033 GO_REF:0000114, RGD:2299945, RGD:2307013 NCBI chr 1:104,161,984...104,178,074
Ensembl chr 1:95,025,499...95,036,465 		JBrowse link
G Pold2 DNA polymerase delta 2, accessory subunit involved_in IMP
IEA
ISO		 GO_REF:0000107
GO_REF:0000114
(PMID:20334433)		 Ensembl
ComplexPortal
RGD		 PMID:20334433 PMID:7503737 GO_REF:0000107 GO_REF:0000114, RGD:2307013 NCBI chr14:80,748,971...80,755,188
Ensembl chr14:80,748,974...80,755,160 		JBrowse link
G Pold3 DNA polymerase delta 3, accessory subunit involved_in IMP
ISO		 GO_REF:0000114
(PMID:20334433)		 ComplexPortal
RGD		 PMID:20334433 PMID:7503737 GO_REF:0000114, RGD:2307013 NCBI chr 1:154,417,893...154,456,687
Ensembl chr 1:154,418,084...154,456,665 		JBrowse link
G Pold4 DNA polymerase delta 4, accessory subunit involved_in IMP
IBA
ISO		 GO_REF:0000033
GO_REF:0000114
(PMID:20334433)		 GO_Central
ComplexPortal
RGD		 PMID:20334433 PMID:7503737 GO_REF:0000033 GO_REF:0000114, RGD:2307013 NCBI chr 1:201,526,591...201,528,406
Ensembl chr 1:201,526,665...201,528,401 		JBrowse link
G Pole DNA polymerase epsilon, catalytic subunit involved_in ISO (PMID:33051204) RGD PMID:33051204 NCBI chr12:52,005,155...52,053,761
Ensembl chr12:46,345,420...46,393,939 		JBrowse link
G Pole2 DNA polymerase epsilon 2, accessory subunit involved_in ISO
IBA		 (PMID:33051204)
GO_REF:0000033		 RGD
GO_Central		 PMID:33051204 GO_REF:0000033 NCBI chr 6:87,674,702...87,712,723
Ensembl chr 6:87,674,702...87,699,305 		JBrowse link
G Pole3 DNA polymerase epsilon 3, accessory subunit involved_in ISO (PMID:33051204) RGD PMID:33051204 NCBI chr 5:75,973,941...75,977,175
Ensembl chr 5:75,974,717...75,977,231
Ensembl chr 7:75,974,717...75,977,231 		JBrowse link
G Pole4 DNA polymerase epsilon 4, accessory subunit involved_in ISO
IBA		 (PMID:33051204)
GO_REF:0000033		 RGD
GO_Central		 PMID:33051204 GO_REF:0000033 NCBI chr 4:115,165,285...115,171,097
Ensembl chr 4:115,165,285...115,171,097 		JBrowse link
G Pole4l1 DNA polymerase epsilon 4, accessory subunit like 1 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr 3:67,324,377...67,324,995 JBrowse link
G Polg DNA polymerase gamma, catalytic subunit involved_in ISO (PMID:10608893), (PMID:15167897), (PMID:19837034), (PMID:19858216), (PMID:26123486), (PMID:26446790), (PMID:28430993) RGD PMID:10608893 PMID:15167897 PMID:19837034 PMID:19858216 PMID:26123486 More... NCBI chr 1:142,792,119...142,808,933
Ensembl chr 1:133,382,766...133,398,567 		JBrowse link
G Polg2 DNA polymerase gamma 2, accessory subunit involved_in ISO (PMID:10608893), (PMID:15167897), (PMID:19837034), (PMID:19858216), (PMID:26123486), (PMID:26446790), (PMID:28430993) RGD PMID:10608893 PMID:15167897 PMID:19837034 PMID:19858216 PMID:26123486 More... NCBI chr10:92,212,303...92,222,849
Ensembl chr10:91,712,586...91,723,008 		JBrowse link
G Poln DNA polymerase nu involved_in IEA GO_REF:0000002 InterPro GO_REF:0000002 NCBI chr14:76,579,983...76,752,460
Ensembl chr14:76,580,546...76,752,463 		JBrowse link
G Rfc1 replication factor C subunit 1 involved_in ISO (PMID:9488738) RGD PMID:9488738 NCBI chr14:43,319,768...43,395,028
Ensembl chr14:42,966,324...43,041,370 		JBrowse link
G Rfc2 replication factor C subunit 2 involved_in ISO
IBA		 (PMID:9488738)
GO_REF:0000033		 RGD
GO_Central		 PMID:9488738 GO_REF:0000033 NCBI chr12:22,120,449...22,133,576
Ensembl chr12:22,120,010...22,133,557 		JBrowse link
G Rfc3 replication factor C subunit 3 involved_in ISO
IBA		 (PMID:9488738)
GO_REF:0000033		 RGD
GO_Central		 PMID:9488738 GO_REF:0000033 NCBI chr12:1,000,987...1,011,778
Ensembl chr12:1,000,994...1,011,778 		JBrowse link
G Rfc4 replication factor C subunit 4 involved_in ISO
IBA		 (PMID:9488738)
GO_REF:0000033		 RGD
GO_Central		 PMID:9488738 GO_REF:0000033 NCBI chr11:77,749,642...77,764,123
Ensembl chr11:77,749,638...77,764,122 		JBrowse link
G Rfc5 replication factor C subunit 5 involved_in ISO
IBA		 (PMID:9488738)
GO_REF:0000033		 RGD
GO_Central		 PMID:9488738 GO_REF:0000033 NCBI chr12:39,207,484...39,217,041
Ensembl chr12:39,207,484...39,217,312 		JBrowse link
G Ssbp1 single stranded DNA binding protein 1 involved_in IEA
ISO		 GO_REF:0000107
(PMID:26446790)		 Ensembl
RGD		 PMID:26446790 GO_REF:0000107 NCBI chr 4:69,266,024...69,276,135
Ensembl chr 4:69,266,102...69,276,135 		JBrowse link
G Twnk twinkle mtDNA helicase involved_in ISO (PMID:15167897) RGD PMID:15167897 NCBI chr 1:253,817,074...253,823,958
Ensembl chr 1:243,868,330...243,874,802 		JBrowse link
G Wdhd1 WD repeat and HMG-box DNA binding protein 1 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr15:20,478,310...20,523,106
Ensembl chr15:20,489,291...20,523,096 		JBrowse link
G Wdr18 WD repeat domain 18 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr 7:9,740,245...9,748,041
Ensembl chr 7:9,739,604...9,748,070 		JBrowse link
G Wrnip1 WRN helicase interacting protein 1 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr17:31,621,410...31,641,659
Ensembl chr17:31,621,411...31,641,659 		JBrowse link
double-strand break repair term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Abraxas1 abraxas 1, BRCA1 A complex subunit involved_in ISS
ISO
IEA		 GO_REF:0000024
(PMID:17525340), (PMID:17643121), (PMID:19261748)
GO_REF:0000107		 UniProt
RGD
Ensembl		 PMID:17525340 PMID:17643121 PMID:19261748 GO_REF:0000024 GO_REF:0000107 NCBI chr14:9,100,650...9,115,012
Ensembl chr14:8,796,266...8,810,622 		JBrowse link
G Actr5 actin related protein 5 involved_in ISO (PMID:19014934) RGD PMID:19014934 NCBI chr 3:147,282,461...147,295,870
Ensembl chr 3:147,282,624...147,296,110 		JBrowse link
G Actr8 actin related protein 8 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr16:5,164,131...5,186,353
Ensembl chr16:5,164,129...5,178,577 		JBrowse link
G Apbb1 amyloid beta precursor protein binding family B member 1 involved_in ISO (PMID:17121854) RGD PMID:17121854 NCBI chr 1:169,308,719...169,332,372
Ensembl chr 1:159,896,880...159,920,627 		JBrowse link
G Aplf aprataxin and PNKP like factor involved_in
acts_upstream_of_or_within		 ISO
IBA		 (PMID:17396150)
MGI:4128102 (PMID:21211721)
GO_REF:0000033		 RGD
GO_Central		 PMID:17396150 PMID:21211721 GO_REF:0000033 NCBI chr 4:120,070,471...120,122,656
Ensembl chr 4:120,070,471...120,122,633 		JBrowse link
G Atm ATM serine/threonine kinase involved_in ISO
IBA		 (PMID:26240375)
GO_REF:0000033		 RGD
GO_Central		 PMID:26240375 GO_REF:0000033 NCBI chr 8:62,724,939...62,829,040
Ensembl chr 8:53,831,093...53,932,437 		JBrowse link
G Atr ATR serine/threonine kinase involved_in ISO (PMID:11390642) RGD PMID:11390642 NCBI chr 8:96,426,704...96,524,152
Ensembl chr 8:96,426,724...96,524,136 		JBrowse link
G Babam1 BRISC and BRCA1 A complex member 1 involved_in ISO
IBA
ISS		 (PMID:19261746), (PMID:19261748), (PMID:19261749)
GO_REF:0000033
GO_REF:0000024		 RGD
GO_Central
UniProt		 PMID:19261746 PMID:19261748 PMID:19261749 GO_REF:0000024 GO_REF:0000033 NCBI chr16:18,102,885...18,108,916
Ensembl chr16:18,068,884...18,074,923 		JBrowse link
G Babam2 BRISC and BRCA1 A complex member 2 involved_in ISS
IBA
IEA
ISO		 GO_REF:0000024
GO_REF:0000033
GO_REF:0000104
(PMID:19261748)		 UniProt
GO_Central
RGD		 PMID:19261748 GO_REF:0000024 GO_REF:0000033 GO_REF:0000104 NCBI chr 6:24,369,021...24,788,416
Ensembl chr 6:24,369,022...24,833,951 		JBrowse link
G Bend2 BEN domain containing 2 acts_upstream_of_or_within ISO (PMID:35613276) RGD PMID:35613276 NCBI chr  X:36,997,518...37,093,363 JBrowse link
G Brca1 BRCA1, DNA repair associated involved_in ISO (PMID:17525340), (PMID:17643121), (PMID:19261748), (PMID:22186889)
(PMID:22186889)		 RGD PMID:17525340 PMID:17643121 PMID:19261748 PMID:22186889 NCBI chr10:86,917,693...86,978,012
Ensembl chr10:86,418,000...86,477,304 		JBrowse link
G Brca2 BRCA2, DNA repair associated involved_in
acts_upstream_of_or_within		 ISO (PMID:16845393)
MGI:2156556|MGI:2176173|MGI:2177226 (PMID:17476307), (PMID:9398843)		 RGD PMID:9398843 PMID:16845393 PMID:17476307 NCBI chr12:4,895,092...4,939,340
Ensembl chr12:59,819...100,567 		JBrowse link
G Brcc3 BRCA1/BRCA2-containing complex subunit 3 involved_in ISS
IBA
ISO		 GO_REF:0000024
GO_REF:0000033
(PMID:17525341), (PMID:19261746), (PMID:19261748)		 UniProt
GO_Central
RGD		 PMID:17525341 PMID:19261746 PMID:19261748 GO_REF:0000024 GO_REF:0000033 NCBI chr 9:1,986,942...1,989,484
Ensembl chr 9:1,986,575...1,991,080 		JBrowse link
G Brcc3dc BRCA1/BRCA2-containing complex, subunit 3, domain containing involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr 7:44,014,889...44,016,646
Ensembl chr 7:44,005,646...44,016,670 		JBrowse link
G Cdca5 cell division cycle associated 5 involved_in ISO
IBA		 (PMID:17349791)
GO_REF:0000033		 RGD
GO_Central		 PMID:17349791 GO_REF:0000033 NCBI chr 1:203,378,550...203,392,027
Ensembl chr 1:203,378,577...203,392,023 		JBrowse link
G Chek2 checkpoint kinase 2 involved_in ISO (PMID:18317453) RGD PMID:18317453 NCBI chr12:51,448,838...51,481,159
Ensembl chr12:45,788,827...45,821,286 		JBrowse link
G Csnk2a1 casein kinase 2 alpha 1 involved_in ISS
IBA
ISO		 GO_REF:0000024
GO_REF:0000033
(PMID:22325354)		 UniProt
GO_Central
RGD		 PMID:22325354 GO_REF:0000024 GO_REF:0000033 NCBI chr 3:161,170,295...161,217,073
Ensembl chr 3:140,709,991...140,756,696 		JBrowse link
G Csnk2a2 casein kinase 2 alpha 2 involved_in ISO (PMID:22325354) RGD PMID:22325354 NCBI chr19:9,562,340...9,602,136
Ensembl chr19:9,556,260...9,596,080 		JBrowse link
G Dclre1c DNA cross-link repair 1C acts_upstream_of_or_within
involved_in		 ISO
IEA		 (PMID:12615897)
GO_REF:0000107		 RGD
Ensembl		 PMID:12615897 GO_REF:0000107 NCBI chr17:79,684,988...79,718,399
Ensembl chr17:74,776,935...74,809,186 		JBrowse link
G Ddx1 DEAD-box helicase 1 involved_in ISS
ISO		 GO_REF:0000024
(PMID:18710941)		 UniProt
RGD		 PMID:18710941 GO_REF:0000024 NCBI chr 6:41,725,365...41,756,236
Ensembl chr 6:35,996,469...36,027,365 		JBrowse link
G Dtx3l deltex E3 ubiquitin ligase 3L involved_in ISO (PMID:23230272) RGD PMID:23230272 NCBI chr11:64,814,926...64,824,539
Ensembl chr11:64,814,926...64,824,538 		JBrowse link
G Eme1 essential meiotic structure-specific endonuclease 1 involved_in ISO
IBA		 (PMID:18413719)
GO_REF:0000033		 RGD
GO_Central		 PMID:18413719 GO_REF:0000033 NCBI chr10:80,083,585...80,092,450
Ensembl chr10:79,586,729...79,595,435 		JBrowse link
G Eme2 essential meiotic structure-specific endonuclease subunit 2 involved_in ISO
IBA		 (PMID:17289582)
GO_REF:0000033		 RGD
GO_Central		 PMID:17289582 GO_REF:0000033 NCBI chr10:13,913,216...13,915,991
Ensembl chr10:13,913,221...13,915,968 		JBrowse link
G Ercc1 ERCC excision repair 1, endonuclease non-catalytic subunit NOT|acts_upstream_of_or_within ISO MGI:2183944 (PMID:11707424)
MGI:2158940|MGI:2183944|MGI:3617449 (PMID:15199134), (PMID:17912366)		 RGD PMID:11707424 PMID:15199134 PMID:17912366 NCBI chr 1:88,099,308...88,135,966
Ensembl chr 1:78,996,390...79,007,963 		JBrowse link
G Esco2 establishment of sister chromatid cohesion N-acetyltransferase 2 acts_upstream_of_or_within ISO MGI:5308063 (PMID:22614755) RGD PMID:22614755 NCBI chr15:44,210,124...44,230,785
Ensembl chr15:40,034,568...40,055,306
Ensembl chr15:40,034,568...40,055,306 		JBrowse link
G Exd2 exonuclease 3'-5' domain containing 2 involved_in ISO (PMID:26807646) RGD PMID:26807646 NCBI chr 6:100,116,867...100,150,452
Ensembl chr 6:100,116,867...100,150,442 		JBrowse link
G Eya1 EYA transcriptional coactivator and phosphatase 1 involved_in ISO (PMID:19234442) RGD PMID:19234442 NCBI chr 5:4,863,501...5,101,483
Ensembl chr 5:4,955,543...5,101,483 		JBrowse link
G Eya3 EYA transcriptional coactivator and phosphatase 3 involved_in ISO (PMID:19234442) RGD PMID:19234442 NCBI chr 5:144,806,523...144,934,522
Ensembl chr 5:144,806,577...144,934,518 		JBrowse link
G Ggn gametogenetin involved_in
acts_upstream_of_or_within		 IEA
ISO		 GO_REF:0000002
MGI:5503309 (PMID:23451117)		 InterPro
RGD		 PMID:23451117 GO_REF:0000002 NCBI chr 1:84,470,488...84,474,120
Ensembl chr 1:84,470,508...84,474,114 		JBrowse link
G Haus3 HAUS augmin-like complex, subunit 3 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr14:76,580,549...76,599,542
Ensembl chr14:76,580,546...76,752,463 		JBrowse link
G Hmgb1 high mobility group box 1 involved_in IDA PMID:10866811 UniProt PMID:10866811 RGD:10449519 NCBI chr12:11,009,236...11,015,941
Ensembl chr12:5,901,586...5,978,565
Ensembl chr16:5,901,586...5,978,565 		JBrowse link
G Hpf1 histone PARylation factor 1 involved_in ISO
IBA		 (PMID:32028527)
GO_REF:0000033		 RGD
GO_Central		 PMID:32028527 GO_REF:0000033 NCBI chr16:29,203,749...29,219,651
Ensembl chr16:29,183,256...29,219,716 		JBrowse link
G Ino80 INO80 complex ATPase subunit involved_in ISO (PMID:20687897) RGD PMID:20687897 NCBI chr 3:106,368,455...106,465,716
Ensembl chr 3:106,368,455...106,467,911 		JBrowse link
G Kat5 lysine acetyltransferase 5 involved_in ISS
ISO		 GO_REF:0000024
(PMID:26438602)		 UniProt
RGD		 PMID:26438602 GO_REF:0000024 NCBI chr 1:212,325,089...212,332,640
Ensembl chr 1:202,895,751...202,903,458 		JBrowse link
G Lig3 DNA ligase 3 involved_in ISO
IBA		 (PMID:19589734)
GO_REF:0000033		 RGD
GO_Central		 PMID:19589734 GO_REF:0000033 NCBI chr10:67,717,808...67,741,141
Ensembl chr10:67,717,812...67,798,414 		JBrowse link
G Lig4 DNA ligase 4 involved_in
acts_upstream_of_or_within		 ISO (PMID:19589734), (PMID:9242410)
MGI:104517|MGI:1857732|MGI:3714783|MGI:894697 (PMID:12531011), (PMID:15175260), (PMID:17554302)		 RGD PMID:9242410 PMID:12531011 PMID:15175260 PMID:17554302 PMID:19589734 NCBI chr16:79,518,393...79,526,956
Ensembl chr16:79,518,312...79,527,040 		JBrowse link
G LOC102557137 E3 ubiquitin-protein ligase RNF168-like involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr  X:40,065,873...40,067,029
Ensembl chr  X:40,065,873...40,067,207 		JBrowse link
G Mad2l2 mitotic arrest deficient 2 like 2 involved_in ISO
ISS		 (PMID:15988022)
GO_REF:0000024		 RGD
UniProt		 PMID:15988022 GO_REF:0000024 NCBI chr 5:158,563,545...158,576,698
Ensembl chr 5:158,563,567...158,576,693 		JBrowse link
G Marf1 meiosis regulator and mRNA stability factor 1 acts_upstream_of_or_within ISO MGI:3512917 (PMID:23090997) RGD PMID:23090997 NCBI chr10:888,053...932,760
Ensembl chr10:888,076...932,753 		JBrowse link
G Meioc meiosis specific with coiled-coil domain involved_in ISO (PMID:26742488) RGD PMID:26742488 NCBI chr10:88,128,939...88,147,833
Ensembl chr10:87,628,875...87,646,752 		JBrowse link
G Mpnd MPN domain containing involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr 9:839,473...846,446
Ensembl chr 9:840,143...846,439 		JBrowse link
G Mre11 MRE11 homolog, double strand break repair nuclease involved_in
acts_upstream_of_or_within		 ISO
IEA		 (PMID:14657032), (PMID:26240375)
GO_REF:0000104
MGI:3027036 (PMID:17291760)		 RGD
UniProt		 PMID:14657032 PMID:17291760 PMID:26240375 GO_REF:0000104 NCBI chr 8:19,900,211...19,961,906
Ensembl chr 8:11,632,354...11,678,279 		JBrowse link
G Msh2 mutS homolog 2 involved_in
acts_upstream_of_or_within		 IEA
ISO		 GO_REF:0000107
MGI:1858055 (PMID:17912366)		 Ensembl
RGD		 PMID:17912366 GO_REF:0000107 NCBI chr 6:12,567,368...12,626,534
Ensembl chr 6:6,813,795...6,872,938 		JBrowse link
G Mta1 metastasis associated 1 involved_in ISO
IBA
IEA
ISS		 (PMID:19805145)
GO_REF:0000033
GO_REF:0000107
GO_REF:0000024		 RGD
GO_Central
Ensembl
UniProt		 PMID:19805145 GO_REF:0000024 GO_REF:0000033 GO_REF:0000107 NCBI chr 6:132,178,608...132,217,641
Ensembl chr 6:132,178,853...132,217,641 		JBrowse link
G Mus81 MUS81 structure-specific endonuclease subunit involved_in ISO (PMID:17289582), (PMID:18413719) RGD PMID:17289582 PMID:18413719 NCBI chr 1:202,790,295...202,796,008
Ensembl chr 1:202,790,466...202,795,843 		JBrowse link
G Nbn nibrin involved_in ISS
IEA
ISO		 GO_REF:0000024
GO_REF:0000002
(PMID:9590181)		 UniProt
InterPro
RGD		 PMID:9590181 GO_REF:0000002 GO_REF:0000024 NCBI chr 5:34,256,678...34,291,163
Ensembl chr 5:29,459,457...29,494,150 		JBrowse link
G Parp1 poly (ADP-ribose) polymerase 1 involved_in
acts_upstream_of_or_within		 ISS
ISO
IBA		 GO_REF:0000024
MGI:1891258 (PMID:21270334)
GO_REF:0000033
(PMID:23230272), (PMID:24906880), (PMID:27568560), (PMID:28190768), (PMID:32028527)		 UniProt
RGD
GO_Central		 PMID:21270334 PMID:23230272 PMID:24906880 PMID:27568560 PMID:28190768 More... GO_REF:0000024 GO_REF:0000033 NCBI chr13:94,839,484...94,871,295
Ensembl chr13:92,307,586...92,339,404 		JBrowse link
G Parp2 poly (ADP-ribose) polymerase 2 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr15:24,034,069...24,044,340
Ensembl chr15:24,034,106...24,044,338 		JBrowse link
G Parp3 poly (ADP-ribose) polymerase family, member 3 acts_upstream_of_or_within
involved_in		 ISO
IBA		 (PMID:21211721), (PMID:21270334)
MGI:1340806 (PMID:21270334)
GO_REF:0000033		 RGD
GO_Central		 PMID:21211721 PMID:21270334 GO_REF:0000033 NCBI chr 8:115,989,721...115,995,822
Ensembl chr 8:107,111,012...107,116,782 		JBrowse link
G Parp9 poly (ADP-ribose) polymerase family, member 9 involved_in ISO (PMID:23230272) RGD PMID:23230272 NCBI chr11:64,780,977...64,814,995
Ensembl chr11:64,780,981...64,815,455 		JBrowse link
G Plk1 polo-like kinase 1 involved_in ISO (PMID:22325354) RGD PMID:22325354 NCBI chr 1:186,147,658...186,157,637
Ensembl chr 1:176,716,420...176,726,400 		JBrowse link
G Poln DNA polymerase nu involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr14:76,579,983...76,752,460
Ensembl chr14:76,580,546...76,752,463 		JBrowse link
G Polq DNA polymerase theta involved_in ISO (PMID:22135286) RGD PMID:22135286 NCBI chr11:77,179,190...77,281,270
Ensembl chr11:63,673,816...63,775,878 		JBrowse link
G Prkdc protein kinase, DNA-activated, catalytic subunit involved_in
acts_upstream_of_or_within		 ISO
IBA		 (PMID:18710952)
MGI:1857113|MGI:2667593 (PMID:11751629), (PMID:12604618)
GO_REF:0000033		 RGD
GO_Central		 PMID:11751629 PMID:12604618 PMID:18710952 GO_REF:0000033 NCBI chr11:98,544,952...98,762,499
Ensembl chr11:85,040,792...85,257,952 		JBrowse link
G Rad21l1 RAD21 cohesin complex component like 1 acts_upstream_of_or_within ISO MGI:5292341 (PMID:21743440) RGD PMID:21743440 NCBI chr 3:140,160,128...140,188,324
Ensembl chr 3:140,160,118...140,188,298 		JBrowse link
G Rad50 RAD50 double strand break repair protein involved_in TAS
IBA
ISS
ISO		 GO_REF:0000033
GO_REF:0000024
(PMID:9590181)		 GO_Central
UniProt
RGD		 PMID:9590181 PMID:10908350 GO_REF:0000024 GO_REF:0000033, RGD:68816 NCBI chr10:38,310,147...38,362,100
Ensembl chr10:37,808,726...37,861,396 		JBrowse link
G Rad54l RAD54 like acts_upstream_of_or_within ISO MGI:1335098 (PMID:15175260) RGD PMID:15175260 NCBI chr 5:134,812,158...134,841,821
Ensembl chr 5:129,575,378...129,605,070 		JBrowse link
G Rdm1 RAD52 motif containing 1 involved_in IEA GO_REF:0000117 UniProt GO_REF:0000117 NCBI chr10:86,562,871...86,573,034
Ensembl chr10:86,539,553...86,573,034 		JBrowse link
G Rec8 REC8 meiotic recombination protein involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr15:29,109,862...29,117,327
Ensembl chr15:29,109,863...29,117,326 		JBrowse link
G Rnf168 ring finger protein 168 involved_in ISO
IBA
ISS		 (PMID:19203578), (PMID:19203579), (PMID:22980979)
GO_REF:0000033
GO_REF:0000024		 RGD
GO_Central
UniProt		 PMID:19203578 PMID:19203579 PMID:22980979 GO_REF:0000024 GO_REF:0000033 NCBI chr11:68,486,313...68,508,296
Ensembl chr11:68,486,321...68,508,277 		JBrowse link
G Rnf169 ring finger protein 169 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr 1:154,250,462...154,311,867
Ensembl chr 1:154,254,473...154,311,653 		JBrowse link
G Rnf8 ring finger protein 8 involved_in ISS
IBA
ISO		 GO_REF:0000024
GO_REF:0000033
(PMID:18001824), (PMID:18001825), (PMID:22980979)		 UniProt
GO_Central
RGD		 PMID:18001824 PMID:18001825 PMID:22980979 GO_REF:0000024 GO_REF:0000033 NCBI chr20:7,682,258...7,710,448
Ensembl chr20:7,682,322...7,708,491 		JBrowse link
G Setx senataxin involved_in ISO (PMID:17562789) RGD PMID:17562789 NCBI chr 3:12,428,091...12,480,801
Ensembl chr 3:12,427,635...12,480,803 		JBrowse link
G Sirt6 sirtuin 6 involved_in ISO (PMID:21680843), (PMID:27568560) RGD PMID:21680843 PMID:27568560 NCBI chr 7:8,082,312...8,087,776
Ensembl chr 7:8,082,364...8,098,914 		JBrowse link
G Smchd1 structural maintenance of chromosomes flexible hinge domain containing 1 involved_in IEA GO_REF:0000002 InterPro GO_REF:0000002 NCBI chr 9:111,243,445...111,387,272
Ensembl chr 9:111,247,702...111,349,665 		JBrowse link
G Tdp1 tyrosyl-DNA phosphodiesterase 1 involved_in ISO
IEA		 (PMID:12023295)
GO_REF:0000107		 RGD
Ensembl		 PMID:12023295 GO_REF:0000107 NCBI chr 6:119,163,192...119,231,029
Ensembl chr 6:119,163,166...119,231,021 		JBrowse link
G Tdp2 tyrosyl-DNA phosphodiesterase 2 involved_in ISO
IBA
IEA
ISS		 (PMID:19794497), (PMID:21030584)
GO_REF:0000033
GO_REF:0000107
GO_REF:0000024		 RGD
GO_Central
Ensembl
UniProt		 PMID:19794497 PMID:21030584 GO_REF:0000024 GO_REF:0000033 GO_REF:0000107 NCBI chr17:40,228,943...40,240,337
Ensembl chr17:40,228,947...40,240,313 		JBrowse link
G Tnks1bp1 tankyrase 1 binding protein 1 involved_in ISO
IBA		 (PMID:25749521)
GO_REF:0000033		 RGD
GO_Central		 PMID:25749521 GO_REF:0000033 NCBI chr 3:70,135,335...70,160,071
Ensembl chr 3:70,137,837...70,160,038 		JBrowse link
G Tp53 tumor protein p53 involved_in
acts_upstream_of_or_within		 IEA
ISO		 GO_REF:0000107
MGI:1857989 (PMID:17912366)		 Ensembl
RGD		 PMID:17912366 GO_REF:0000107 NCBI chr10:54,798,871...54,810,300
Ensembl chr10:54,300,048...54,311,524 		JBrowse link
G Trip13 thyroid hormone receptor interactor 13 involved_in
acts_upstream_of_or_within		 ISS
ISO		 GO_REF:0000024
(PMID:20711356)
MGI:3719273 (PMID:17696610)		 UniProt
RGD		 PMID:17696610 PMID:20711356 GO_REF:0000024 NCBI chr 1:29,357,093...29,402,078
Ensembl chr 1:29,357,130...29,402,074 		JBrowse link
G Uimc1 ubiquitin interaction motif containing 1 involved_in ISS
IBA
IEA
ISO		 GO_REF:0000024
GO_REF:0000033
GO_REF:0000002
(PMID:17525340), (PMID:17525341), (PMID:17525342), (PMID:17643121), (PMID:19261748)
GO_REF:0000107		 UniProt
GO_Central
InterPro
RGD
Ensembl		 PMID:17525340 PMID:17525341 PMID:17525342 PMID:17643121 PMID:19261748 GO_REF:0000002 GO_REF:0000024 GO_REF:0000033 GO_REF:0000107 NCBI chr17:9,523,793...9,592,810
Ensembl chr17:9,527,794...9,592,799 		JBrowse link
G Vcp valosin-containing protein involved_in ISS
ISO		 GO_REF:0000024
(PMID:10855792), (PMID:22120668)		 UniProt
RGD		 PMID:10855792 PMID:22120668 GO_REF:0000024 NCBI chr 5:62,005,984...62,025,387
Ensembl chr 5:57,210,168...57,229,571 		JBrowse link
G Wrn WRN RecQ like helicase involved_in ISO (PMID:21639834) RGD PMID:21639834 NCBI chr16:65,466,552...65,602,951
Ensembl chr16:58,763,504...58,895,450 		JBrowse link
G Xrcc1 X-ray repair cross complementing 1 involved_in ISO (PMID:19589734) RGD PMID:19589734 NCBI chr 1:89,268,721...89,296,619
Ensembl chr 1:80,141,207...80,168,701 		JBrowse link
G Xrcc4 X-ray repair cross complementing 4 acts_upstream_of_or_within
involved_in		 ISO MGI:1926771 (PMID:11751629), (PMID:9875844)
(PMID:19589734), (PMID:9242410)		 RGD PMID:9242410 PMID:9875844 PMID:11751629 PMID:19589734 NCBI chr 2:20,948,464...21,197,705
Ensembl chr 2:20,951,200...21,197,808 		JBrowse link
G Xrcc5 X-ray repair cross complementing 5 acts_upstream_of_or_within
involved_in		 NAS
ISO		 MGI:1335098|MGI:2179987 (PMID:12531011)
(PMID:19581589)		 RGD PMID:12531011 PMID:19581589 PMID:11966321 RGD:727219 NCBI chr 9:73,955,216...74,044,020
Ensembl chr 9:73,955,216...74,044,018 		JBrowse link
G Xrcc6 X-ray repair cross complementing 6 acts_upstream_of_or_within TAS
ISO		 MGI:2179954 (PMID:11751629) RGD PMID:11751629 PMID:11966321 RGD:727219 NCBI chr 7:113,542,992...113,563,762
Ensembl chr 7:113,543,057...113,563,762 		JBrowse link
G Zgrf1 zinc finger, GRF-type containing 1 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr 2:216,012,911...216,075,608
Ensembl chr 2:216,013,005...216,074,750 		JBrowse link
double-strand break repair involved in meiotic recombination term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Brip1 BRCA1 interacting DNA helicase 1 involved_in
acts_upstream_of_or_within		 IBA
ISO		 GO_REF:0000033
MGI:4129733 (PMID:26490168)		 GO_Central
RGD		 PMID:26490168 GO_REF:0000033 NCBI chr10:71,402,035...71,528,083
Ensembl chr10:70,907,371...71,030,324 		JBrowse link
G Brme1 break repair meiotic recombinase recruitment factor 1 involved_in ISO (PMID:32345962), (PMID:32460033), (PMID:32463460) RGD PMID:32345962 PMID:32460033 PMID:32463460 NCBI chr19:23,990,049...24,011,774
Ensembl chr19:23,990,045...24,011,850 		JBrowse link
G Dmc1 DNA meiotic recombinase 1 involved_in ISO (PMID:17639081) RGD PMID:17639081 NCBI chr 7:111,124,888...111,167,465
Ensembl chr 7:111,124,888...111,167,952 		JBrowse link
G Fancd2 FA complementation group D2 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr 4:148,234,633...148,299,035
Ensembl chr 4:146,679,179...146,743,412 		JBrowse link
G Hsf2bp heat shock transcription factor 2 binding protein involved_in ISO (PMID:30760716), (PMID:31242413), (PMID:32345962), (PMID:32463460) RGD PMID:30760716 PMID:31242413 PMID:32345962 PMID:32463460 NCBI chr20:10,035,562...10,123,059
Ensembl chr20:10,035,562...10,121,242 		JBrowse link
G Majin membrane anchored junction protein acts_upstream_of_or_within ISO MGI:1921651 (PMID:30718482) RGD PMID:30718482 NCBI chr 1:203,487,777...203,524,098
Ensembl chr 1:203,488,069...203,524,092 		JBrowse link
G Mcmdc2 minichromosome maintenance domain containing 2 acts_upstream_of_or_within ISO MGI:1349669|MGI:2178050|MGI:5511194 (PMID:27760146) RGD PMID:27760146 NCBI chr 5:9,291,967...9,337,526
Ensembl chr 5:9,298,101...9,338,300 		JBrowse link
G Morc2b microrchidia 2B involved_in IEA GO_REF:0000107 Ensembl GO_REF:0000107 NCBI chr 7:12,314,341...12,318,421
Ensembl chr 7:12,314,349...12,318,421 		JBrowse link
G Prdm9 PR/SET domain 9 involved_in ISS
ISO		 GO_REF:0000024
(PMID:25894966), (PMID:29478809)		 UniProt
RGD		 PMID:25894966 PMID:29478809 GO_REF:0000024 NCBI chr 1:65,178,666...65,198,851
Ensembl chr 1:56,505,579...56,525,652 		JBrowse link
G Rad51 RAD51 recombinase involved_in ISO (PMID:15834424) RGD PMID:15834424 NCBI chr 3:126,554,210...126,578,888
Ensembl chr 3:106,100,381...106,125,035 		JBrowse link
G Spo11 SPO11 initiator of meiotic double strand breaks acts_upstream_of_or_within ISO MGI:3045334 (PMID:27760146) RGD PMID:27760146 NCBI chr 3:161,755,299...161,770,930
Ensembl chr 3:161,757,519...161,770,925 		JBrowse link
G Terb1 telomere repeat binding bouquet formation protein 1 acts_upstream_of_or_within ISO MGI:1921651 (PMID:30718482) RGD PMID:30718482 NCBI chr19:473,720...528,069
Ensembl chr19:473,218...528,084 		JBrowse link
G Terb2 telomere repeat binding bouquet formation protein 2 acts_upstream_of_or_within ISO MGI:1923913|MGI:2443187|MGI:6362934|MGI:6362936 (PMID:30718482) RGD PMID:30718482 NCBI chr 3:109,138,343...109,156,700
Ensembl chr 3:109,138,343...109,156,683 		JBrowse link
double-strand break repair via alternative nonhomologous end joining term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Helq helicase, POLQ-like involved_in ISO (PMID:34937945) RGD PMID:34937945 NCBI chr14:8,818,582...8,862,926
Ensembl chr14:8,818,592...8,862,960 		JBrowse link
G Hmces 5-hydroxymethylcytosine binding, ES cell specific involved_in ISO (PMID:31806351) RGD PMID:31806351 NCBI chr 4:120,392,812...120,415,616
Ensembl chr 4:120,366,542...120,415,616 		JBrowse link
G Lig3 DNA ligase 3 involved_in ISO UniProtKB:P13010 (PMID:24837021)
(PMID:21655080)		 RGD PMID:21655080 PMID:24837021 NCBI chr10:67,717,808...67,741,141
Ensembl chr10:67,717,812...67,798,414 		JBrowse link
G Nbn nibrin involved_in IEA
ISO		 GO_REF:0000107
(PMID:28216226)		 Ensembl
RGD		 PMID:28216226 GO_REF:0000107 NCBI chr 5:34,256,678...34,291,163
Ensembl chr 5:29,459,457...29,494,150 		JBrowse link
G Plk1 polo-like kinase 1 involved_in IEA
ISO		 GO_REF:0000107
(PMID:37440612), (PMID:37674080)		 Ensembl
RGD		 PMID:37440612 PMID:37674080 GO_REF:0000107 NCBI chr 1:186,147,658...186,157,637
Ensembl chr 1:176,716,420...176,726,400 		JBrowse link
G Polq DNA polymerase theta involved_in IBA
ISO		 GO_REF:0000033
(PMID:25642960), (PMID:29058711)
(PMID:25643323), (PMID:25775267), (PMID:27311885), (PMID:27591252), (PMID:31562312), (PMID:32234782), (PMID:34179826), (PMID:36455556), (PMID:37440612), (PMID:37674080)		 GO_Central
RGD		 PMID:25642960 PMID:25643323 PMID:25775267 PMID:27311885 PMID:27591252 More... GO_REF:0000033 NCBI chr11:77,179,190...77,281,270
Ensembl chr11:63,673,816...63,775,878 		JBrowse link
G Rhno1 RAD9-HUS1-RAD1 interacting nuclear orphan 1 involved_in ISS
ISO		 GO_REF:0000024
(PMID:37440612)		 UniProt
RGD		 PMID:37440612 GO_REF:0000024 NCBI chr 4:161,634,047...161,639,437
Ensembl chr 4:161,634,048...161,639,371 		JBrowse link
G Topbp1 DNA topoisomerase II binding protein 1 involved_in ISO (PMID:37674080) RGD PMID:37674080 NCBI chr 8:103,887,805...103,931,662
Ensembl chr 8:103,887,865...103,931,674 		JBrowse link
double-strand break repair via break-induced replication term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G AC129365.1 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 Ensembl chr 2:141,551,434...141,554,016 JBrowse link
G Cdc7 cell division cycle 7 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr14:2,804,660...2,824,796
Ensembl chr14:2,804,661...2,824,778 		JBrowse link
G Gins2 GINS complex subunit 2 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr19:48,626,770...48,639,523
Ensembl chr19:48,626,770...48,639,339 		JBrowse link
G Gins4 GINS complex subunit 4 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr16:68,787,572...68,799,938
Ensembl chr16:68,767,339...68,802,273 		JBrowse link
G Mcm2 minichromosome maintenance complex component 2 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr 4:121,346,434...121,360,962
Ensembl chr 4:121,346,434...121,360,847 		JBrowse link
G Mcm3 minichromosome maintenance complex component 3 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr 9:23,219,169...23,237,314
Ensembl chr 9:23,219,169...23,237,314 		JBrowse link
G Mcm4 minichromosome maintenance complex component 4 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr11:85,258,443...85,272,144
Ensembl chr11:85,258,443...85,272,144 		JBrowse link
G Mcm5 minichromosome maintenance complex component 5 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr19:13,483,030...13,504,389
Ensembl chr19:13,483,066...13,504,389 		JBrowse link
G Mcmdc2 minichromosome maintenance domain containing 2 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr 5:9,291,967...9,337,526
Ensembl chr 5:9,298,101...9,338,300 		JBrowse link
G Mus81 MUS81 structure-specific endonuclease subunit involved_in IEA
IBA		 GO_REF:0000104
GO_REF:0000033		 UniProt
GO_Central		 GO_REF:0000033 GO_REF:0000104 NCBI chr 1:202,790,295...202,796,008
Ensembl chr 1:202,790,466...202,795,843 		JBrowse link
double-strand break repair via classical nonhomologous end joining term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Bend2 BEN domain containing 2 acts_upstream_of_or_within ISO (PMID:35613276) RGD PMID:35613276 NCBI chr  X:36,997,518...37,093,363 JBrowse link
G Ercc6 ERCC excision repair 6, chromatin remodeling factor involved_in ISO (PMID:29545921) RGD PMID:29545921 NCBI chr16:7,771,311...7,841,895
Ensembl chr16:7,765,013...7,835,587 		JBrowse link
G Ercc8 ERCC excision repair 8, CSA ubiquitin ligase complex subunit involved_in ISO (PMID:29545921) RGD PMID:29545921 NCBI chr 2:41,380,901...41,418,294
Ensembl chr 2:39,647,452...39,684,859 		JBrowse link
G Lig4 DNA ligase 4 involved_in ISO (PMID:24837021) RGD PMID:24837021 NCBI chr16:79,518,393...79,526,956
Ensembl chr16:79,518,312...79,527,040 		JBrowse link
G Rnf168 ring finger protein 168 involved_in IEA
ISO		 GO_REF:0000107
(PMID:27153538)		 Ensembl
RGD		 PMID:27153538 GO_REF:0000107 NCBI chr11:68,486,313...68,508,296
Ensembl chr11:68,486,321...68,508,277 		JBrowse link
G Topbp1 DNA topoisomerase II binding protein 1 involved_in ISO (PMID:31135337) RGD PMID:31135337 NCBI chr 8:103,887,805...103,931,662
Ensembl chr 8:103,887,865...103,931,674 		JBrowse link
G Tp53bp1 tumor protein p53 binding protein 1 involved_in ISO (PMID:27153538) RGD PMID:27153538 NCBI chr 3:128,620,320...128,724,716
Ensembl chr 3:108,169,980...108,269,822 		JBrowse link
G Uvrag UV radiation resistance associated involved_in ISO (PMID:22542840) RGD PMID:22542840 NCBI chr 1:162,596,514...162,854,348
Ensembl chr 1:153,185,395...153,442,136 		JBrowse link
G Xrcc6 X-ray repair cross complementing 6 involved_in ISO (PMID:24095731), (PMID:9826654) RGD PMID:9826654 PMID:24095731 NCBI chr 7:113,542,992...113,563,762
Ensembl chr 7:113,543,057...113,563,762 		JBrowse link
G Zbtb7a zinc finger and BTB domain containing 7a involved_in IEA
ISO
ISS		 GO_REF:0000107
(PMID:26446488)
GO_REF:0000024		 Ensembl
RGD
UniProt		 PMID:26446488 GO_REF:0000024 GO_REF:0000107 NCBI chr 7:8,561,015...8,578,243
Ensembl chr 7:8,563,779...8,576,539 		JBrowse link
double-strand break repair via homologous recombination term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ankle1 ankyrin repeat and LEM domain containing 1 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr16:18,076,413...18,082,356
Ensembl chr16:18,076,492...18,083,729 		JBrowse link
G Ap5s1 adaptor related protein complex 5 subunit sigma 1 involved_in ISO (PMID:20613862) RGD PMID:20613862 NCBI chr 3:118,429,618...118,432,929
Ensembl chr 3:118,429,637...118,432,926 		JBrowse link
G Ap5z1 adaptor related protein complex 5 subunit zeta 1 involved_in ISO (PMID:20613862) RGD PMID:20613862 NCBI chr12:17,207,315...17,222,975
Ensembl chr12:12,093,834...12,108,511 		JBrowse link
G Aste1 asteroid homolog 1 involved_in ISO (PMID:34354233) RGD PMID:34354233 NCBI chr 8:106,026,570...106,044,694
Ensembl chr 8:106,026,515...106,044,430 		JBrowse link
G Atm ATM serine/threonine kinase acts_upstream_of_or_within
involved_in		 ISO MGI:1857132 (PMID:19061978)
(PMID:10802669)		 RGD PMID:10802669 PMID:19061978 NCBI chr 8:62,724,939...62,829,040
Ensembl chr 8:53,831,093...53,932,437 		JBrowse link
G Aunip aurora kinase A and ninein interacting protein involved_in ISS
IEA
ISO		 GO_REF:0000024
GO_REF:0000107
(PMID:29042561)		 UniProt
Ensembl
RGD		 PMID:29042561 GO_REF:0000024 GO_REF:0000107 NCBI chr 5:146,722,329...146,734,924
Ensembl chr 5:146,722,337...146,736,501 		JBrowse link
G Blm BLM RecQ like helicase involved_in ISO
IBA		 (PMID:23543748)
GO_REF:0000033		 RGD
GO_Central		 PMID:23543748 GO_REF:0000033 NCBI chr 1:143,819,072...143,905,300
Ensembl chr 1:134,409,857...134,484,312 		JBrowse link
G Brca1 BRCA1, DNA repair associated involved_in IEA
IBA
ISO		 GO_REF:0000107
GO_REF:0000033
(PMID:17349954), (PMID:28398198)		 Ensembl
GO_Central
RGD		 PMID:17349954 PMID:28398198 GO_REF:0000033 GO_REF:0000107 NCBI chr10:86,917,693...86,978,012
Ensembl chr10:86,418,000...86,477,304 		JBrowse link
G Brca2 BRCA2, DNA repair associated involved_in
acts_upstream_of_or_within		 IEA
IBA
ISO
ISS		 GO_REF:0000107
GO_REF:0000033
MGI:2653913|MGI:2653914 (PMID:15485900)
GO_REF:0000002
(PMID:20729832), (PMID:21719596), (PMID:28398198)
GO_REF:0000024		 Ensembl
GO_Central
RGD
InterPro
UniProt		 PMID:15485900 PMID:20729832 PMID:21719596 PMID:28398198 GO_REF:0000002 GO_REF:0000024 GO_REF:0000033 GO_REF:0000107 NCBI chr12:4,895,092...4,939,340
Ensembl chr12:59,819...100,567 		JBrowse link
G Chd4 chromodomain helicase DNA binding protein 4 involved_in ISO (PMID:25593309) RGD PMID:25593309 NCBI chr 4:159,584,623...159,617,867
Ensembl chr 4:157,899,391...157,931,541 		JBrowse link
G Dmc1 DNA meiotic recombinase 1 involved_in ISO (PMID:17639081) RGD PMID:17639081 NCBI chr 7:111,124,888...111,167,465
Ensembl chr 7:111,124,888...111,167,952 		JBrowse link
G Epc1 enhancer of polycomb homolog 1 involved_in ISO (PMID:27153538) RGD PMID:27153538 NCBI chr17:54,503,358...54,594,444
Ensembl chr17:54,503,358...54,594,425 		JBrowse link
G Ercc4 ERCC excision repair 4, endonuclease catalytic subunit involved_in ISO
IBA		 (PMID:14728600)
GO_REF:0000033		 RGD
GO_Central		 PMID:14728600 GO_REF:0000033 NCBI chr10:2,926,085...2,958,176
Ensembl chr10:2,419,038...2,448,369
Ensembl chr10:2,419,038...2,448,369 		JBrowse link
G Ercc4l1 excision repair cross-complementing rodent repair deficiency, complementation group 4-like 1 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr10:954,927...983,651
Ensembl chr10:954,977...983,174 		JBrowse link
G Ercc5 ERCC excision repair 5, endonuclease involved_in ISO (PMID:26833090) RGD PMID:26833090 NCBI chr 9:53,801,471...53,846,611
Ensembl chr 9:46,309,389...46,354,472 		JBrowse link
G Exd2 exonuclease 3'-5' domain containing 2 involved_in ISO (PMID:26807646) RGD PMID:26807646 NCBI chr 6:100,116,867...100,150,452
Ensembl chr 6:100,116,867...100,150,442 		JBrowse link
G Fan1 FANCD2 and FANCI associated nuclease 1 involved_in ISO (PMID:20603015), (PMID:20603016) RGD PMID:20603015 PMID:20603016 NCBI chr 1:127,327,098...127,356,807
Ensembl chr 1:117,917,099...117,944,977 		JBrowse link
G Fbh1 F-box DNA helicase 1 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr17:66,749,506...66,787,590
Ensembl chr17:66,749,534...66,787,590 		JBrowse link
G Gen1 GEN1 Holliday junction 5' flap endonuclease involved_in ISO (PMID:23166748) RGD PMID:23166748 NCBI chr 6:33,947,599...33,978,461
Ensembl chr 6:33,948,206...33,978,401 		JBrowse link
G H2ax H2A.X variant histone acts_upstream_of_or_within ISO MGI:2156048 (PMID:11934988) RGD PMID:11934988 NCBI chr 8:53,568,718...53,570,072
Ensembl chr 8:44,671,786...44,673,239
Ensembl chr 4:44,671,786...44,673,239 		JBrowse link
G Helq helicase, POLQ-like involved_in ISO (PMID:19995904) RGD PMID:19995904 NCBI chr14:8,818,582...8,862,926
Ensembl chr14:8,818,592...8,862,960 		JBrowse link
G Htatsf1 HIV-1 Tat specific factor 1 involved_in ISO (PMID:35597237) RGD PMID:35597237 NCBI chr  X:134,935,426...134,949,607
Ensembl chr  X:134,935,426...134,949,607 		JBrowse link
G Hus1 HUS1 checkpoint clamp component involved_in IBA
ISO		 GO_REF:0000033
(PMID:16278671)		 GO_Central
RGD		 PMID:16278671 GO_REF:0000033 NCBI chr14:83,688,702...83,703,466
Ensembl chr14:83,688,708...83,703,442 		JBrowse link
G Inip INTS3 and NABP interacting protein involved_in ISO (PMID:19683501) RGD PMID:19683501 NCBI chr 5:74,648,392...74,662,628
Ensembl chr 5:74,648,392...74,662,628 		JBrowse link
G Ino80 INO80 complex ATPase subunit involved_in ISO (PMID:18026119) RGD PMID:18026119 NCBI chr 3:106,368,455...106,465,716
Ensembl chr 3:106,368,455...106,467,911 		JBrowse link
G Ints3 integrator complex subunit 3 involved_in ISO (PMID:19683501) RGD PMID:19683501 NCBI chr 2:175,859,421...175,911,683
Ensembl chr 2:175,859,440...175,911,709 		JBrowse link
G Kash5 KASH domain containing 5 acts_upstream_of_or_within ISO (PMID:24062341) RGD PMID:24062341 NCBI chr 1:104,805,248...104,827,720
Ensembl chr 1:95,668,886...95,691,368 		JBrowse link
G Kat5 lysine acetyltransferase 5 involved_in ISS
ISO
IBA
IEA		 GO_REF:0000024
(PMID:30297459)
GO_REF:0000033
GO_REF:0000107
(PMID:27153538)		 UniProt
RGD
GO_Central
Ensembl		 PMID:27153538 PMID:30297459 GO_REF:0000024 GO_REF:0000033 GO_REF:0000107 NCBI chr 1:212,325,089...212,332,640
Ensembl chr 1:202,895,751...202,903,458 		JBrowse link
G Kdm4d lysine demethylase 4D acts_upstream_of_or_within ISO (PMID:24550317) RGD PMID:24550317 NCBI chr 8:11,279,756...11,304,920
Ensembl chr 8:11,268,859...11,305,290 		JBrowse link
G LOC120093168 nuclear ubiquitous casein and cyclin-dependent kinase substrate 1-like involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr 6:136,594,866...136,595,965
Ensembl chr 6:136,594,855...136,596,600 		JBrowse link
G Mbtd1 mbt domain containing 1 involved_in ISO (PMID:27153538), (PMID:32209463) RGD PMID:27153538 PMID:32209463 NCBI chr10:79,336,041...79,392,315
Ensembl chr10:78,839,036...78,893,720 		JBrowse link
G Mcm8 minichromosome maintenance 8 homologous recombination repair factor involved_in ISO
IBA
ISS		 (PMID:23401855)
(PMID:22771120)
GO_REF:0000033
GO_REF:0000024		 RGD
GO_Central
UniProt		 PMID:22771120 PMID:23401855 GO_REF:0000024 GO_REF:0000033 NCBI chr 3:120,086,741...120,117,008
Ensembl chr 3:120,086,763...120,117,008 		JBrowse link
G Mcm9 minichromosome maintenance 9 homologous recombination repair factor involved_in ISO
IEA
ISS		 (PMID:22771115), (PMID:23401855)
(PMID:22771120), (PMID:23401855)
GO_REF:0000107
GO_REF:0000024		 RGD
Ensembl
UniProt		 PMID:22771115 PMID:22771120 PMID:23401855 GO_REF:0000024 GO_REF:0000107 NCBI chr20:32,818,219...32,929,577
Ensembl chr20:32,844,951...32,929,600 		JBrowse link
G Meiob meiosis specific with OB-fold involved_in ISS
ISO		 GO_REF:0000024
(PMID:24068956), (PMID:24240703)		 UniProt
RGD		 PMID:24068956 PMID:24240703 GO_REF:0000024 NCBI chr10:13,833,170...13,865,684
Ensembl chr10:13,833,750...13,865,046 		JBrowse link
G Mms22l MMS22-like, DNA repair protein involved_in ISO
IBA		 (PMID:21055983), (PMID:21055984), (PMID:21055985), (PMID:27797818)
GO_REF:0000033		 RGD
GO_Central		 PMID:21055983 PMID:21055984 PMID:21055985 PMID:27797818 GO_REF:0000033 NCBI chr 5:38,197,707...38,313,745
Ensembl chr 5:38,197,779...38,313,745 		JBrowse link
G Morf4l1 mortality factor 4 like 1 involved_in ISO
IEA
ISS		 (PMID:20332121)
GO_REF:0000107
GO_REF:0000024		 RGD
Ensembl
UniProt		 PMID:20332121 GO_REF:0000024 GO_REF:0000107 NCBI chr 8:90,642,988...90,664,518
Ensembl chr 8:90,642,988...90,664,519 		JBrowse link
G Mre11 MRE11 homolog, double strand break repair nuclease involved_in ISS
IBA
ISO
IEA		 GO_REF:0000024
GO_REF:0000033
(PMID:18854157)
(PMID:15741314), (PMID:24316220), (PMID:27814491), (PMID:27889449), (PMID:28867292), (PMID:29670289), (PMID:30612738), (PMID:30787182), (PMID:31353207), (PMID:36563124), (PMID:38128537)
GO_REF:0000107		 UniProt
GO_Central
RGD
Ensembl		 PMID:15741314 PMID:18854157 PMID:24316220 PMID:27814491 PMID:27889449 More... GO_REF:0000024 GO_REF:0000033 GO_REF:0000107 NCBI chr 8:19,900,211...19,961,906
Ensembl chr 8:11,632,354...11,678,279 		JBrowse link
G Nabp1 nucleic acid binding protein 1 involved_in ISS
IBA
ISO		 GO_REF:0000024
GO_REF:0000033
(PMID:19605351), (PMID:19683501)		 UniProt
GO_Central
RGD		 PMID:19605351 PMID:19683501 GO_REF:0000024 GO_REF:0000033 NCBI chr 9:50,098,552...50,133,982
Ensembl chr 9:50,126,726...50,134,107 		JBrowse link
G Nabp2 nucleic acid binding protein 2 involved_in ISS
IBA
IEA
ISO		 GO_REF:0000024
GO_REF:0000033
GO_REF:0000107
(PMID:19605351), (PMID:19683501)		 UniProt
GO_Central
Ensembl
RGD		 PMID:19605351 PMID:19683501 GO_REF:0000024 GO_REF:0000033 GO_REF:0000107 NCBI chr 7:830,949...836,551
Ensembl chr 7:830,949...838,027 		JBrowse link
G Nbn nibrin involved_in IEA
IBA
ISO		 GO_REF:0000107
GO_REF:0000033
(PMID:22464731), (PMID:23115235), (PMID:27814491), (PMID:27889449), (PMID:28867292), (PMID:30787182), (PMID:30952868), (PMID:38961290)		 Ensembl
GO_Central
RGD		 PMID:22464731 PMID:23115235 PMID:27814491 PMID:27889449 PMID:28867292 More... GO_REF:0000033 GO_REF:0000107 NCBI chr 5:34,256,678...34,291,163
Ensembl chr 5:29,459,457...29,494,150 		JBrowse link
G Nsmce1 NSE1 homolog, SMC5-SMC6 complex component involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr 1:180,030,355...180,058,541
Ensembl chr 1:180,030,160...180,058,417 		JBrowse link
G Nsmce2 NSE2/MMS21 homolog, SMC5-SMC6 complex SUMO ligase involved_in ISO
IBA
IEA
ISS		 (PMID:16810316)
GO_REF:0000033
GO_REF:0000107
GO_REF:0000024
GO_REF:0000002		 RGD
GO_Central
Ensembl
UniProt
InterPro		 PMID:16810316 GO_REF:0000002 GO_REF:0000024 GO_REF:0000033 GO_REF:0000107 NCBI chr 7:90,936,112...91,173,435
Ensembl chr 7:90,936,112...91,164,899 		JBrowse link
G Nucks1 nuclear casein kinase and cyclin-dependent kinase substrate 1 involved_in ISO
IBA		 (PMID:26323318)
GO_REF:0000033		 RGD
GO_Central		 PMID:26323318 GO_REF:0000033 NCBI chr13:43,345,091...43,374,316
Ensembl chr13:43,345,115...43,370,229 		JBrowse link
G Palb2 partner and localizer of BRCA2 involved_in ISO
IBA		 (PMID:19369211), (PMID:19423707), (PMID:26323318), (PMID:28398198)
GO_REF:0000033		 RGD
GO_Central		 PMID:19369211 PMID:19423707 PMID:26323318 PMID:28398198 GO_REF:0000033 NCBI chr 1:186,096,312...186,120,284
Ensembl chr 1:176,665,076...176,688,990 		JBrowse link
G Pogz pogo transposable element derived with ZNF domain acts_upstream_of_or_within_positive_effect ISO (PMID:26721387) RGD PMID:26721387 NCBI chr 2:182,394,269...182,440,711
Ensembl chr 2:182,380,768...182,440,707 		JBrowse link
G Poll DNA polymerase lambda involved_in ISO
ISS		 (PMID:20693240)
GO_REF:0000024		 RGD
UniProt		 PMID:20693240 GO_REF:0000024 NCBI chr 1:244,400,202...244,408,762
Ensembl chr 1:244,400,204...244,408,662 		JBrowse link
G Poln DNA polymerase nu involved_in ISO (PMID:19995904) RGD PMID:19995904 NCBI chr14:76,579,983...76,752,460
Ensembl chr14:76,580,546...76,752,463 		JBrowse link
G Ppp4c protein phosphatase 4, catalytic subunit involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr 1:181,392,899...181,399,703
Ensembl chr 1:181,392,923...181,399,659 		JBrowse link
G Psmd14 proteasome 26S subunit, non-ATPase 14 involved_in ISO (PMID:22909820) RGD PMID:22909820 NCBI chr 3:46,254,338...46,347,076
Ensembl chr 3:46,254,330...46,347,076 		JBrowse link
G Rad21l1 RAD21 cohesin complex component like 1 acts_upstream_of_or_within ISO MGI:1929645 (PMID:22711701) RGD PMID:22711701 NCBI chr 3:140,160,128...140,188,324
Ensembl chr 3:140,160,118...140,188,298 		JBrowse link
G Rad50 RAD50 double strand break repair protein involved_in IEA
ISO		 GO_REF:0000107
(PMID:27889449), (PMID:28867292)		 Ensembl
RGD		 PMID:27889449 PMID:28867292 GO_REF:0000107 NCBI chr10:38,310,147...38,362,100
Ensembl chr10:37,808,726...37,861,396 		JBrowse link
G Rad51 RAD51 recombinase acts_upstream_of_or_within
involved_in		 IEP
ISO		 (PMID:15359272), (PMID:15485900)
(PMID:15834424)
(PMID:17996710), (PMID:17996711), (PMID:18417535), (PMID:22778135), (PMID:23509288), (PMID:26681308), (PMID:26811421), (PMID:27239033), (PMID:32640219)
(PMID:16428451)		 RGD PMID:15359272 PMID:15485900 PMID:15834424 PMID:16428451 PMID:17996710 More... RGD:9831188 NCBI chr 3:126,554,210...126,578,888
Ensembl chr 3:106,100,381...106,125,035 		JBrowse link
G Rad51ap1 RAD51 associated protein 1 involved_in ISO
IBA		 (PMID:26323318)
GO_REF:0000033		 RGD
GO_Central		 PMID:26323318 GO_REF:0000033 NCBI chr 4:159,759,454...159,772,473
Ensembl chr 4:159,759,459...159,772,524 		JBrowse link
G Rad51b RAD51 paralog B involved_in ISO
IBA		 (PMID:23149936)
GO_REF:0000033		 RGD
GO_Central		 PMID:23149936 GO_REF:0000033 NCBI chr 6:103,829,390...104,373,923
Ensembl chr 6:98,098,868...98,640,979 		JBrowse link
G Rad51c RAD51 paralog C involved_in ISO (PMID:23149936) RGD PMID:23149936 NCBI chr10:72,702,299...72,728,980
Ensembl chr10:72,205,032...72,231,248 		JBrowse link
G Rad51d RAD51 paralog D involved_in ISO (PMID:23149936) RGD PMID:23149936 NCBI chr10:68,303,350...68,322,002
Ensembl chr10:67,740,712...67,824,434 		JBrowse link
G Rad52 RAD52 homolog, DNA repair protein involved_in
acts_upstream_of_or_within		 IBA
ISO		 GO_REF:0000033
(PMID:12379650)		 GO_Central
RGD		 PMID:12379650 GO_REF:0000033 NCBI chr 4:153,106,062...153,128,598
Ensembl chr 4:153,106,062...153,128,207 		JBrowse link
G Rad54b RAD54 homolog B acts_upstream_of_or_within ISO (PMID:16428451)
MGI:3617695|MGI:894697 (PMID:16428451), (PMID:19061978)		 RGD PMID:16428451 PMID:19061978 NCBI chr 5:25,032,112...25,104,630
Ensembl chr 5:25,032,066...25,104,616 		JBrowse link
G Rad54l RAD54 like acts_upstream_of_or_within ISO MGI:2183934|MGI:3605986 (PMID:16428451), (PMID:19061978) RGD PMID:16428451 PMID:19061978 NCBI chr 5:134,812,158...134,841,821
Ensembl chr 5:129,575,378...129,605,070 		JBrowse link
G Rbbp8 RB binding protein 8, endonuclease involved_in ISS
ISO		 GO_REF:0000024
(PMID:26721387), (PMID:27814491), (PMID:27889449), (PMID:30787182)		 UniProt
RGD		 PMID:26721387 PMID:27814491 PMID:27889449 PMID:30787182 GO_REF:0000024 NCBI chr18:2,922,985...2,988,851
Ensembl chr18:2,921,286...2,988,846 		JBrowse link
G Rec8 REC8 meiotic recombination protein acts_upstream_of_or_within ISO MGI:3652039 (PMID:22711701) RGD PMID:22711701 NCBI chr15:29,109,862...29,117,327
Ensembl chr15:29,109,863...29,117,326 		JBrowse link
G Recql RecQ like helicase involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr 4:177,039,351...177,063,968
Ensembl chr 4:175,304,117...175,332,945 		JBrowse link
G Recql4 RecQ like helicase 4 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr 7:110,304,092...110,311,426
Ensembl chr 7:108,423,455...108,430,619 		JBrowse link
G Recql5 RecQ like helicase 5 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr10:101,126,544...101,165,739
Ensembl chr10:101,126,547...101,165,652 		JBrowse link
G Rev3l REV3 like, DNA directed polymerase zeta catalytic subunit involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr20:43,131,841...43,290,102
Ensembl chr20:43,132,363...43,290,099 		JBrowse link
G RFFL ring finger and FYVE like domain containing E3 ubiquitin protein ligase involved_in IEA
IBA		 Ensembl
GO_Central		 GO_REF:0000033 GO_REF:0000107
G Rfwd3 ring finger and WD repeat domain 3 involved_in ISO (PMID:26474068), (PMID:28575657), (PMID:28575658), (PMID:28691929) RGD PMID:26474068 PMID:28575657 PMID:28575658 PMID:28691929 NCBI chr19:39,235,883...39,268,479
Ensembl chr19:39,236,787...39,268,479 		JBrowse link
G Rmi1 RecQ mediated genome instability 1 involved_in ISO
IBA		 (PMID:23543748)
GO_REF:0000033		 RGD
GO_Central		 PMID:23543748 GO_REF:0000033 NCBI chr17:6,256,533...6,264,523
Ensembl chr17:6,256,450...6,264,695 		JBrowse link
G Rmi2 RecQ mediated genome instability 2 involved_in ISO (PMID:23543748) RGD PMID:23543748 NCBI chr10:4,829,333...4,837,264
Ensembl chr10:4,830,553...4,837,235 		JBrowse link
G Rnf138 ring finger protein 138 involved_in ISO
IEA
IBA
ISS		 (PMID:26502055), (PMID:26502057)
GO_REF:0000107
GO_REF:0000033
GO_REF:0000024		 RGD
Ensembl
GO_Central
UniProt		 PMID:26502055 PMID:26502057 GO_REF:0000024 GO_REF:0000033 GO_REF:0000107 NCBI chr18:12,291,557...12,315,931
Ensembl chr18:12,291,590...12,315,930 		JBrowse link
G Rnf138l1 ring finger protein 138 like 1 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr  X:30,739,541...30,740,614
Ensembl chr  X:30,739,413...30,740,613 		JBrowse link
G Rnf169 ring finger protein 169 involved_in ISO (PMID:22492721) RGD PMID:22492721 NCBI chr 1:154,250,462...154,311,867
Ensembl chr 1:154,254,473...154,311,653 		JBrowse link
G Rpa1 replication protein A1 involved_in
acts_upstream_of_or_within		 ISO
IBA		 (PMID:17765923)
GO_REF:0000033
MGI:3582609 (PMID:15470499)		 RGD
GO_Central		 PMID:15470499 PMID:17765923 GO_REF:0000033 NCBI chr10:60,148,869...60,199,970
Ensembl chr10:60,148,793...60,199,949 		JBrowse link
G Rpa2 replication protein A2 involved_in ISS
IBA
ISO		 GO_REF:0000024
GO_REF:0000033
(PMID:17765923)		 UniProt
GO_Central
RGD		 PMID:17765923 GO_REF:0000024 GO_REF:0000033 NCBI chr 5:144,976,789...144,989,445
Ensembl chr 5:144,976,748...144,987,350 		JBrowse link
G Rpa3 replication protein A3 involved_in ISO
IBA		 (PMID:17765923)
GO_REF:0000033		 RGD
GO_Central		 PMID:17765923 GO_REF:0000033 NCBI chr 4:36,304,649...36,307,755
Ensembl chr 4:36,304,651...36,307,709 		JBrowse link
G Rpa3l1 replication protein A3 like 1 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr12:45,908,653...45,909,063
Ensembl chr12:45,908,683...45,909,048 		JBrowse link
G Samhd1 SAM and HD domain containing deoxynucleoside triphosphate triphosphohydrolase 1 involved_in ISO (PMID:28834754), (PMID:29670289) RGD PMID:28834754 PMID:29670289 NCBI chr 3:145,761,549...145,794,420
Ensembl chr 3:145,761,558...145,794,386 		JBrowse link
G Sem1 SEM1 26S proteasome subunit involved_in
acts_upstream_of_or_within		 IBA
ISO		 GO_REF:0000033
(PMID:15359272)		 GO_Central
RGD		 PMID:15359272 GO_REF:0000033 NCBI chr 4:34,671,848...34,692,005
Ensembl chr 4:34,671,848...34,692,005 		JBrowse link
G Sfpq splicing factor proline and glutamine rich acts_upstream_of_or_within ISO (PMID:20813759) RGD PMID:20813759 NCBI chr 5:139,338,034...139,353,476
Ensembl chr 5:139,338,075...139,353,472 		JBrowse link
G Sfr1 SWI5-dependent homologous recombination repair protein 1 involved_in ISS
ISO
IBA
IEA		 GO_REF:0000024
(PMID:20976249)
GO_REF:0000033
GO_REF:0000107
(PMID:21252223)		 UniProt
RGD
GO_Central
Ensembl		 PMID:20976249 PMID:21252223 GO_REF:0000024 GO_REF:0000033 GO_REF:0000107 NCBI chr 1:246,619,235...246,623,250
Ensembl chr 1:246,597,044...246,623,250 		JBrowse link
G Slx1b SLX1 homolog B, structure-specific endonuclease subunit involved_in ISO
IBA		 (PMID:19595721)
GO_REF:0000033		 RGD
GO_Central		 PMID:19595721 GO_REF:0000033 NCBI chr 1:181,286,190...181,291,739
Ensembl chr 1:181,283,921...181,291,775 		JBrowse link
G Slx4 SLX4 structure-specific endonuclease subunit involved_in ISO (PMID:19595721), (PMID:19596235) RGD PMID:19595721 PMID:19596235 NCBI chr10:11,526,623...11,549,313
Ensembl chr10:11,528,424...11,549,295 		JBrowse link
G Smc5 structural maintenance of chromosomes 5 involved_in ISO
IBA		 (PMID:16810316)
GO_REF:0000033		 RGD
GO_Central		 PMID:16810316 GO_REF:0000033 NCBI chr 1:220,769,366...220,839,138
Ensembl chr 1:220,769,366...220,839,096 		JBrowse link
G Smc6 structural maintenance of chromosomes 6 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr 6:33,978,730...34,033,201
Ensembl chr 6:33,978,716...34,031,746 		JBrowse link
G Spidr scaffold protein involved in DNA repair involved_in ISO
IBA		 (PMID:23509288), (PMID:27967308), (PMID:34697795)
GO_REF:0000033		 RGD
GO_Central		 PMID:23509288 PMID:27967308 PMID:34697795 GO_REF:0000033 NCBI chr11:98,270,779...98,511,760
Ensembl chr11:84,766,593...85,007,600 		JBrowse link
G Swi5 SWI5 homologous recombination repair protein involved_in ISS
IBA
ISO		 GO_REF:0000024
GO_REF:0000033
(PMID:20976249)
(PMID:21252223)		 UniProt
GO_Central
RGD		 PMID:20976249 PMID:21252223 GO_REF:0000024 GO_REF:0000033 NCBI chr 3:15,574,687...15,583,760
Ensembl chr 3:15,564,715...15,583,805 		JBrowse link
G Swsap1 SWIM-type zinc finger 7 associated protein 1 involved_in ISO
IBA		 (PMID:21965664)
GO_REF:0000033		 RGD
GO_Central		 PMID:21965664 GO_REF:0000033 NCBI chr 8:20,486,680...20,489,213
Ensembl chr 8:20,486,678...20,489,211 		JBrowse link
G Tonsl tonsoku-like, DNA repair protein involved_in ISS
IBA
ISO		 GO_REF:0000024
GO_REF:0000033
(PMID:21055983), (PMID:21055984), (PMID:21055985), (PMID:27338793), (PMID:27797818), (PMID:30773278)		 UniProt
GO_Central
RGD		 PMID:21055983 PMID:21055984 PMID:21055985 PMID:27338793 PMID:27797818 More... GO_REF:0000024 GO_REF:0000033 NCBI chr 7:108,345,704...108,360,792
Ensembl chr 7:108,346,047...108,360,750 		JBrowse link
G Top3a DNA topoisomerase III alpha involved_in ISO (PMID:23543748) RGD PMID:23543748 NCBI chr10:45,419,219...45,457,356
Ensembl chr10:45,419,217...45,457,559 		JBrowse link
G Topbp1 DNA topoisomerase II binding protein 1 involved_in ISO (PMID:26811421), (PMID:35597237) RGD PMID:26811421 PMID:35597237 NCBI chr 8:103,887,805...103,931,662
Ensembl chr 8:103,887,865...103,931,674 		JBrowse link
G Ube2n ubiquitin-conjugating enzyme E2N acts_upstream_of ISO (PMID:17349954) RGD PMID:17349954 NCBI chr 7:32,041,190...32,071,252
Ensembl chr 7:30,154,616...30,184,355 		JBrowse link
G Wdr48 WD repeat domain 48 involved_in
acts_upstream_of_or_within		 IBA
ISO		 GO_REF:0000033
MGI:3877670 (PMID:24001775)		 GO_Central
RGD		 PMID:24001775 GO_REF:0000033 NCBI chr 8:119,622,053...119,655,264
Ensembl chr 8:119,622,048...119,655,264 		JBrowse link
G Wrn WRN RecQ like helicase involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr16:65,466,552...65,602,951
Ensembl chr16:58,763,504...58,895,450 		JBrowse link
G Xrcc2 X-ray repair cross complementing 2 involved_in
acts_upstream_of_or_within		 ISO
IBA		 (PMID:23149936)
MGI:3654106 (PMID:16777961)
GO_REF:0000033		 RGD
GO_Central		 PMID:16777961 PMID:23149936 GO_REF:0000033 NCBI chr 4:10,157,130...10,237,089
Ensembl chr 4:9,423,898...9,442,482 		JBrowse link
G Xrcc3 X-ray repair cross complementing 3 involved_in ISO (PMID:23149936) RGD PMID:23149936 NCBI chr 6:136,684,558...136,694,822
Ensembl chr 6:130,863,959...130,872,444 		JBrowse link
G Yy1 YY1 transcription factor involved_in ISO (PMID:18026119) RGD PMID:18026119 NCBI chr 6:133,471,615...133,500,875
Ensembl chr 6:127,707,596...127,732,747 		JBrowse link
G Zfyve26 zinc finger FYVE-type containing 26 involved_in ISO
IEA		 (PMID:20613862)
GO_REF:0000107
GO_REF:0000002		 RGD
Ensembl
InterPro		 PMID:20613862 GO_REF:0000002 GO_REF:0000107 NCBI chr 6:103,764,864...103,828,520
Ensembl chr 6:98,032,520...98,095,480 		JBrowse link
G Zmynd8 zinc finger, MYND-type containing 8 involved_in ISO (PMID:25593309) RGD PMID:25593309 NCBI chr 3:154,528,917...154,629,532
Ensembl chr 3:154,529,043...154,628,463 		JBrowse link
G Zswim7 zinc finger, SWIM-type containing 7 involved_in ISO
IBA		 (PMID:21965664)
GO_REF:0000033		 RGD
GO_Central		 PMID:21965664 GO_REF:0000033 NCBI chr10:46,953,311...46,969,800
Ensembl chr10:46,957,525...46,969,671 		JBrowse link
double-strand break repair via nonhomologous end joining term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Aplf aprataxin and PNKP like factor involved_in ISO (PMID:23689425) RGD PMID:23689425 NCBI chr 4:120,070,471...120,122,656
Ensembl chr 4:120,070,471...120,122,633 		JBrowse link
G Aste1 asteroid homolog 1 involved_in ISO (PMID:34354233) RGD PMID:34354233 NCBI chr 8:106,026,570...106,044,694
Ensembl chr 8:106,026,515...106,044,430 		JBrowse link
G Cyren cell cycle regulator of NHEJ involved_in ISO
IBA
IEA
ISS		 (PMID:24610814)
(PMID:30017584)
GO_REF:0000033
GO_REF:0000107
GO_REF:0000024		 RGD
GO_Central
Ensembl
UniProt		 PMID:24610814 PMID:30017584 GO_REF:0000024 GO_REF:0000033 GO_REF:0000107 NCBI chr 4:63,547,311...63,553,394
Ensembl chr 4:63,547,335...63,551,602 		JBrowse link
G Dclre1a DNA cross-link repair 1A involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr 1:255,569,911...255,589,815
Ensembl chr 1:255,569,919...255,589,678 		JBrowse link
G Dclre1b DNA cross-link repair 1B involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr 2:191,309,909...191,318,399
Ensembl chr 2:191,309,913...191,318,423 		JBrowse link
G Dclre1c DNA cross-link repair 1C involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr17:79,684,988...79,718,399
Ensembl chr17:74,776,935...74,809,186 		JBrowse link
G Dntt DNA nucleotidylexotransferase involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr 1:239,856,391...239,888,283
Ensembl chr 1:239,856,391...239,888,282 		JBrowse link
G Ercc1 ERCC excision repair 1, endonuclease non-catalytic subunit involved_in ISO (PMID:14690602) RGD PMID:14690602 NCBI chr 1:88,099,308...88,135,966
Ensembl chr 1:78,996,390...79,007,963 		JBrowse link
G Ercc4 ERCC excision repair 4, endonuclease catalytic subunit involved_in ISO (PMID:14690602) RGD PMID:14690602 NCBI chr10:2,926,085...2,958,176
Ensembl chr10:2,419,038...2,448,369
Ensembl chr10:2,419,038...2,448,369 		JBrowse link
G Hmgb1 high mobility group box 1 involved_in ISO (PMID:9600082) RGD PMID:9600082 NCBI chr12:11,009,236...11,015,941
Ensembl chr12:5,901,586...5,978,565
Ensembl chr16:5,901,586...5,978,565 		JBrowse link
G Hmgb2 high mobility group box 2 involved_in ISO (PMID:9600082) RGD PMID:9600082 NCBI chr16:37,721,374...37,723,950
Ensembl chr16:32,710,658...32,713,140
Ensembl chr 1:32,710,658...32,713,140 		JBrowse link
G Iffo1 intermediate filament family orphan 1 involved_in ISO (PMID:31548606) RGD PMID:31548606 NCBI chr 4:157,945,075...157,962,302
Ensembl chr 4:157,945,107...157,962,302 		JBrowse link
G Kdm2a lysine demethylase 2A involved_in ISO (PMID:21187428) RGD PMID:21187428 NCBI chr 1:201,612,427...201,682,359
Ensembl chr 1:201,612,453...201,680,787 		JBrowse link
G Lig1 DNA ligase 1 acts_upstream_of_or_within ISO (PMID:21655080) RGD PMID:21655080 NCBI chr 1:74,165,688...74,204,400
Ensembl chr 1:74,165,842...74,204,413 		JBrowse link
G Lig3 DNA ligase 3 acts_upstream_of_or_within ISO (PMID:21655080) RGD PMID:21655080 NCBI chr10:67,717,808...67,741,141
Ensembl chr10:67,717,812...67,798,414 		JBrowse link
G Lig4 DNA ligase 4 involved_in
acts_upstream_of_or_within		 ISO
IBA		 UniProtKB:Q15554 (PMID:12517771), (PMID:17290226), (PMID:23275564), (PMID:9809069)
(PMID:12361565)
MGI:1857720|MGI:1857732 (PMID:10823907), (PMID:16777961)
GO_REF:0000033		 RGD
GO_Central		 PMID:9809069 PMID:10823907 PMID:12361565 PMID:12517771 PMID:16777961 More... GO_REF:0000033 NCBI chr16:79,518,393...79,526,956
Ensembl chr16:79,518,312...79,527,040 		JBrowse link
G Mlh1 mutL homolog 1 involved_in
acts_upstream_of_or_within		 IEA
ISO		 GO_REF:0000107
MGI:1857946 (PMID:15084308)		 Ensembl
RGD		 PMID:15084308 GO_REF:0000107 NCBI chr 8:120,074,871...120,112,109
Ensembl chr 8:111,196,468...111,233,617 		JBrowse link
G Mre11 MRE11 homolog, double strand break repair nuclease involved_in ISO
ISS
IBA
IEA		 (PMID:9651580)
GO_REF:0000024
GO_REF:0000033
GO_REF:0000107		 RGD
UniProt
GO_Central
Ensembl		 PMID:9651580 GO_REF:0000024 GO_REF:0000033 GO_REF:0000107 NCBI chr 8:19,900,211...19,961,906
Ensembl chr 8:11,632,354...11,678,279 		JBrowse link
G Nhej1 nonhomologous end-joining factor 1 involved_in ISS
ISO
IBA
IEA		 PMID:16439205
(PMID:27798842), (PMID:28051062)
GO_REF:0000033
GO_REF:0000117
(PMID:16439204), (PMID:16439205), (PMID:17717001), (PMID:18158905), (PMID:18644470), (PMID:19056826), (PMID:20558749), (PMID:27437582), (PMID:28500754), (PMID:30250067)
GO_REF:0000024		 RGD
GO_Central
UniProt		 PMID:16439204 PMID:16439205 PMID:17717001 PMID:18158905 PMID:18644470 More... GO_REF:0000024 GO_REF:0000033 GO_REF:0000117, RGD:8553261 NCBI chr 9:76,526,322...76,622,488
Ensembl chr 9:76,526,324...76,622,444 		JBrowse link
G Nsmce2 NSE2/MMS21 homolog, SMC5-SMC6 complex SUMO ligase NOT|involved_in ISO (PMID:16810316) RGD PMID:16810316 NCBI chr 7:90,936,112...91,173,435
Ensembl chr 7:90,936,112...91,164,899 		JBrowse link
G Paxx PAXX, non-homologous end joining factor involved_in ISO
IBA		 (PMID:25574025), (PMID:25670504), (PMID:25941166), (PMID:30250067)
(PMID:27798842), (PMID:28051062)
GO_REF:0000033		 RGD
GO_Central		 PMID:25574025 PMID:25670504 PMID:25941166 PMID:27798842 PMID:28051062 More... GO_REF:0000033 NCBI chr 3:8,274,762...8,276,322
Ensembl chr 3:8,274,762...8,276,521 		JBrowse link
G Pnkp polynucleotide kinase 3'-phosphatase involved_in ISO (PMID:15385968), (PMID:28453785) RGD PMID:15385968 PMID:28453785 NCBI chr 1:95,341,465...95,346,921
Ensembl chr 1:95,341,620...95,346,920 		JBrowse link
G Pola1 DNA polymerase alpha 1, catalytic subunit involved_in ISO
ISS		 (PMID:11470886)
GO_REF:0000024		 RGD
UniProt		 PMID:11470886 GO_REF:0000024 NCBI chr  X:58,034,617...58,348,612
Ensembl chr  X:58,034,619...58,348,536 		JBrowse link
G Polb DNA polymerase beta involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr16:69,379,438...69,402,710
Ensembl chr16:69,379,400...69,404,812 		JBrowse link
G Poll DNA polymerase lambda involved_in ISS
IBA
ISO		 GO_REF:0000024
GO_REF:0000033
(PMID:19806195), (PMID:30250067)		 UniProt
GO_Central
RGD		 PMID:19806195 PMID:30250067 GO_REF:0000024 GO_REF:0000033 NCBI chr 1:244,400,202...244,408,762
Ensembl chr 1:244,400,204...244,408,662 		JBrowse link
G Polm DNA polymerase mu involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr14:80,707,075...80,716,677
Ensembl chr14:80,706,345...80,717,086 		JBrowse link
G Prkdc protein kinase, DNA-activated, catalytic subunit acts_upstream_of_or_within ISO (PMID:23836881) RGD PMID:23836881 NCBI chr11:98,544,952...98,762,499
Ensembl chr11:85,040,792...85,257,952 		JBrowse link
G Prpf19 pre-mRNA processing factor 19 involved_in ISO
IEA
ISS		 (PMID:18263876)
GO_REF:0000107
GO_REF:0000024		 RGD
Ensembl
UniProt		 PMID:18263876 GO_REF:0000024 GO_REF:0000107 NCBI chr 1:207,541,582...207,552,664
Ensembl chr 1:207,541,595...207,552,662 		JBrowse link
G Psmd14 proteasome 26S subunit, non-ATPase 14 involved_in ISO (PMID:22909820) RGD PMID:22909820 NCBI chr 3:46,254,338...46,347,076
Ensembl chr 3:46,254,330...46,347,076 		JBrowse link
G Rnf168 ring finger protein 168 involved_in ISO (PMID:27153538) RGD PMID:27153538 NCBI chr11:68,486,313...68,508,296
Ensembl chr11:68,486,321...68,508,277 		JBrowse link
G Rnf8 ring finger protein 8 involved_in ISS
ISO		 GO_REF:0000024
(PMID:21857671), (PMID:22266820)		 UniProt
RGD		 PMID:21857671 PMID:22266820 GO_REF:0000024 NCBI chr20:7,682,258...7,710,448
Ensembl chr20:7,682,322...7,708,491 		JBrowse link
G Setmar SET domain and mariner transposase fusion gene involved_in ISO (PMID:16332963), (PMID:18263876), (PMID:21187428), (PMID:24573677) RGD PMID:16332963 PMID:18263876 PMID:21187428 PMID:24573677 NCBI chr 4:141,046,058...141,058,183
Ensembl chr 4:141,046,069...141,058,197 		JBrowse link
G Smarcal1 SNF2 related chromatin remodeling annealing helicase 1 involved_in ISO (PMID:26089390) RGD PMID:26089390 NCBI chr 9:74,239,718...74,286,156
Ensembl chr 9:74,240,241...74,286,146 		JBrowse link
G Smc5 structural maintenance of chromosomes 5 NOT|involved_in ISO (PMID:16810316) RGD PMID:16810316 NCBI chr 1:220,769,366...220,839,138
Ensembl chr 1:220,769,366...220,839,096 		JBrowse link
G Tp53bp1 tumor protein p53 binding protein 1 involved_in ISO (PMID:23333306), (PMID:23760478), (PMID:27153538), (PMID:28241136), (PMID:31135337)
(PMID:20362325), (PMID:23333305)		 RGD PMID:20362325 PMID:23333305 PMID:23333306 PMID:23760478 PMID:27153538 More... NCBI chr 3:128,620,320...128,724,716
Ensembl chr 3:108,169,980...108,269,822 		JBrowse link
G Xrcc1 X-ray repair cross complementing 1 involved_in ISO (PMID:14690602) RGD PMID:14690602 NCBI chr 1:89,268,721...89,296,619
Ensembl chr 1:80,141,207...80,168,701 		JBrowse link
G Xrcc4 X-ray repair cross complementing 4 involved_in
acts_upstream_of_or_within		 IBA
ISO		 GO_REF:0000033
UniProtKB:P49917 (PMID:12517771), (PMID:15385968), (PMID:17290226), (PMID:25597996), (PMID:25742519), (PMID:25934149), (PMID:26774286), (PMID:27437582), (PMID:28453785), (PMID:28500754), (PMID:9809069)
(PMID:14690602)
MGI:1926771|MGI:3047571|MGI:3641440 (PMID:17713479)		 GO_Central
RGD		 PMID:9809069 PMID:12517771 PMID:14690602 PMID:15385968 PMID:17290226 More... GO_REF:0000033 NCBI chr 2:20,948,464...21,197,705
Ensembl chr 2:20,951,200...21,197,808 		JBrowse link
G Xrcc5 X-ray repair cross complementing 5 involved_in ISO
IBA		 (PMID:20383123), (PMID:26359349)
GO_REF:0000033		 RGD
GO_Central		 PMID:20383123 PMID:26359349 GO_REF:0000033 NCBI chr 9:73,955,216...74,044,020
Ensembl chr 9:73,955,216...74,044,018 		JBrowse link
G Xrcc6 X-ray repair cross complementing 6 involved_in
acts_upstream_of_or_within		 ISO
IBA		 (PMID:20383123), (PMID:26359349)
MGI:2179954 (PMID:11751629)
GO_REF:0000033		 RGD
GO_Central		 PMID:11751629 PMID:20383123 PMID:26359349 GO_REF:0000033 NCBI chr 7:113,542,992...113,563,762
Ensembl chr 7:113,543,057...113,563,762 		JBrowse link
double-strand break repair via single-strand annealing term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Rad52 RAD52 homolog, DNA repair protein involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr 4:153,106,062...153,128,598
Ensembl chr 4:153,106,062...153,128,207 		JBrowse link
double-strand break repair via synthesis-dependent strand annealing term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Fancm FA complementation group M involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr 6:88,862,898...88,916,701
Ensembl chr 6:83,127,093...83,180,028 		JBrowse link
G Helq helicase, POLQ-like involved_in ISO (PMID:34937945) RGD PMID:34937945 NCBI chr14:8,818,582...8,862,926
Ensembl chr14:8,818,592...8,862,960 		JBrowse link
G Xrcc3 X-ray repair cross complementing 3 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr 6:136,684,558...136,694,822
Ensembl chr 6:130,863,959...130,872,444 		JBrowse link
error-free postreplication DNA repair term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ube2v1 ubiquitin conjugating enzyme E2 V1 acts_upstream_of_or_within ISO SGD:S000003055 (PMID:11406273) RGD PMID:11406273 NCBI chr 3:156,317,339...156,340,198
Ensembl chr 3:156,316,781...156,340,273 		JBrowse link
G Ube2v2 ubiquitin conjugating enzyme E2 V2 acts_upstream_of_or_within ISO SGD:S000003055 (PMID:11406273) RGD PMID:11406273 NCBI chr11:85,304,528...85,338,430
Ensembl chr11:85,304,526...85,336,369 		JBrowse link
error-free translesion synthesis term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Pold1 DNA polymerase delta 1, catalytic subunit involved_in ISO
IEA
ISS		 (PMID:24191025)
GO_REF:0000107
GO_REF:0000024		 RGD
Ensembl
UniProt		 PMID:24191025 GO_REF:0000024 GO_REF:0000107 NCBI chr 1:104,161,984...104,178,074
Ensembl chr 1:95,025,499...95,036,465 		JBrowse link
G Poldip2 DNA polymerase delta interacting protein 2 involved_in ISO
IBA		 (PMID:24191025)
GO_REF:0000033		 RGD
GO_Central		 PMID:24191025 GO_REF:0000033 NCBI chr10:63,905,287...63,915,655
Ensembl chr10:63,407,213...63,417,605 		JBrowse link
G Rev1 REV1, DNA directed polymerase involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr 9:40,278,100...40,351,764
Ensembl chr 9:40,278,101...40,351,576 		JBrowse link
error-prone translesion synthesis term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Mad2l2 mitotic arrest deficient 2 like 2 involved_in ISO (PMID:24449906) RGD PMID:24449906 NCBI chr 5:158,563,545...158,576,698
Ensembl chr 5:158,563,567...158,576,693 		JBrowse link
G Pold2 DNA polymerase delta 2, accessory subunit involved_in ISO
IEA		 (PMID:24449906)
GO_REF:0000107		 RGD
Ensembl		 PMID:24449906 GO_REF:0000107 NCBI chr14:80,748,971...80,755,188
Ensembl chr14:80,748,974...80,755,160 		JBrowse link
G Pold3 DNA polymerase delta 3, accessory subunit involved_in ISO (PMID:24449906) RGD PMID:24449906 NCBI chr 1:154,417,893...154,456,687
Ensembl chr 1:154,418,084...154,456,665 		JBrowse link
G Pole2 DNA polymerase epsilon 2, accessory subunit involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr 6:87,674,702...87,712,723
Ensembl chr 6:87,674,702...87,699,305 		JBrowse link
G Polh DNA polymerase eta involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr 9:14,778,355...14,813,210
Ensembl chr 9:14,777,888...14,812,723 		JBrowse link
G Polk DNA polymerase kappa involved_in ISO
IBA		 (PMID:28297716)
GO_REF:0000033		 RGD
GO_Central		 PMID:28297716 GO_REF:0000033 NCBI chr 2:27,822,228...27,882,331
Ensembl chr 2:27,822,679...27,882,313 		JBrowse link
G Polq DNA polymerase theta involved_in ISO (PMID:30655289) RGD PMID:30655289 NCBI chr11:77,179,190...77,281,270
Ensembl chr11:63,673,816...63,775,878 		JBrowse link
G Primpol primase and DNA directed polymerase involved_in ISO (PMID:24682820), (PMID:25746449), (PMID:28534480) RGD PMID:24682820 PMID:25746449 PMID:28534480 NCBI chr16:45,681,252...45,715,758
Ensembl chr16:45,681,326...45,715,565 		JBrowse link
G Rev1 REV1, DNA directed polymerase involved_in
acts_upstream_of_or_within		 IBA
ISO		 GO_REF:0000033
(PMID:11711549)		 GO_Central
RGD		 PMID:11711549 GO_REF:0000033 NCBI chr 9:40,278,100...40,351,764
Ensembl chr 9:40,278,101...40,351,576 		JBrowse link
G Rev3l REV3 like, DNA directed polymerase zeta catalytic subunit involved_in ISO
IBA		 (PMID:24449906)
GO_REF:0000033		 RGD
GO_Central		 PMID:24449906 GO_REF:0000033 NCBI chr20:43,131,841...43,290,102
Ensembl chr20:43,132,363...43,290,099 		JBrowse link
G-quadruplex DNA formation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Cnbp CCHC-type zinc finger, nucleic acid binding protein involved_in ISO
IEA		 (PMID:23774591)
GO_REF:0000107		 RGD
Ensembl		 PMID:23774591 GO_REF:0000107 NCBI chr 4:120,302,768...120,311,694
Ensembl chr 4:120,302,771...120,311,637 		JBrowse link
homologous recombination term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Hdac10 histone deacetylase 10 involved_in ISO
IEA
ISS		 (PMID:21247901)
GO_REF:0000107
GO_REF:0000024		 RGD
Ensembl
UniProt		 PMID:21247901 GO_REF:0000024 GO_REF:0000107 NCBI chr 7:122,078,768...122,084,457
Ensembl chr 7:120,199,129...120,204,228 		JBrowse link
immunoglobulin heavy chain V-D-J recombination term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Polb DNA polymerase beta acts_upstream_of_or_within ISO MGI:5427084 (PMID:24388753) RGD PMID:24388753 NCBI chr16:69,379,438...69,402,710
Ensembl chr16:69,379,400...69,404,812 		JBrowse link
G Yy1 YY1 transcription factor involved_in ISO MGI:3624790 (PMID:23531880) RGD PMID:23531880 NCBI chr 6:133,471,615...133,500,875
Ensembl chr 6:127,707,596...127,732,747 		JBrowse link
immunoglobulin V(D)J recombination term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Cyren cell cycle regulator of NHEJ involved_in ISS
ISO
IEA		 GO_REF:0000024
(PMID:30017584), (PMID:31795137)
GO_REF:0000107		 UniProt
RGD
Ensembl		 PMID:30017584 PMID:31795137 GO_REF:0000024 GO_REF:0000107 NCBI chr 4:63,547,311...63,553,394
Ensembl chr 4:63,547,335...63,551,602 		JBrowse link
G Foxp1 forkhead box P1 acts_upstream_of_or_within ISO MGI:3711150 (PMID:16819554) RGD PMID:16819554 NCBI chr 4:133,117,346...133,808,647
Ensembl chr 4:131,564,756...132,112,258 		JBrowse link
G Lig4 DNA ligase 4 involved_in
acts_upstream_of_or_within		 IBA
ISO		 GO_REF:0000033
MGI:1857732 (PMID:9823897)		 GO_Central
RGD		 PMID:9823897 GO_REF:0000033 NCBI chr16:79,518,393...79,526,956
Ensembl chr16:79,518,312...79,527,040 		JBrowse link
G Nhej1 nonhomologous end-joining factor 1 involved_in ISO
IEA
ISS		 (PMID:20558749)
GO_REF:0000107
GO_REF:0000024		 RGD
Ensembl
UniProt		 PMID:20558749 GO_REF:0000024 GO_REF:0000107 NCBI chr 9:76,526,322...76,622,488
Ensembl chr 9:76,526,324...76,622,444 		JBrowse link
G Prkdc protein kinase, DNA-activated, catalytic subunit involved_in
acts_upstream_of_or_within		 IBA
ISO		 GO_REF:0000033
MGI:2383951 (PMID:9768755)		 GO_Central
RGD		 PMID:9768755 GO_REF:0000033 NCBI chr11:98,544,952...98,762,499
Ensembl chr11:85,040,792...85,257,952 		JBrowse link
G Tcf3 transcription factor 3 acts_upstream_of_or_within
involved_in		 ISO
IBA
IEA		 (PMID:16428437)
MGI:2178112 (PMID:16428437)
GO_REF:0000033
GO_REF:0000107		 RGD
GO_Central
Ensembl		 PMID:16428437 GO_REF:0000033 GO_REF:0000107 NCBI chr 7:9,931,251...9,952,994
Ensembl chr 7:9,280,571...9,302,314 		JBrowse link
G Xrcc4 X-ray repair cross complementing 4 involved_in
acts_upstream_of_or_within		 IBA
ISO		 GO_REF:0000033
MGI:1926771 (PMID:9875844)		 GO_Central
RGD		 PMID:9875844 GO_REF:0000033 NCBI chr 2:20,948,464...21,197,705
Ensembl chr 2:20,951,200...21,197,808 		JBrowse link
interstrand cross-link repair term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Cenps centromere protein S involved_in ISO (PMID:20347429) RGD PMID:20347429 NCBI chr 5:159,563,917...159,573,534 JBrowse link
G Cenpx centromere protein X involved_in ISO (PMID:20347429) RGD PMID:20347429 NCBI chr10:105,991,469...105,994,310 JBrowse link
G Dclre1a DNA cross-link repair 1A involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr 1:255,569,911...255,589,815
Ensembl chr 1:255,569,919...255,589,678 		JBrowse link
G Dclre1b DNA cross-link repair 1B involved_in IEA
IBA
ISO		 GO_REF:0000107
GO_REF:0000033
(PMID:20479256)		 Ensembl
GO_Central
RGD		 PMID:20479256 GO_REF:0000033 GO_REF:0000107 NCBI chr 2:191,309,909...191,318,399
Ensembl chr 2:191,309,913...191,318,423 		JBrowse link
G Dclre1c DNA cross-link repair 1C involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr17:79,684,988...79,718,399
Ensembl chr17:74,776,935...74,809,186 		JBrowse link
G Ercc1 ERCC excision repair 1, endonuclease non-catalytic subunit acts_upstream_of_or_within ISO (PMID:23637614) RGD PMID:23637614 NCBI chr 1:88,099,308...88,135,966
Ensembl chr 1:78,996,390...79,007,963 		JBrowse link
G Ercc6l2 ERCC excision repair 6 like 2 involved_in ISO
IBA		 (PMID:24507776)
GO_REF:0000033		 RGD
GO_Central		 PMID:24507776 GO_REF:0000033 NCBI chr17:1,076,486...1,311,281
Ensembl chr17:1,216,428...1,310,275 		JBrowse link
G Exo5 exonuclease 5 involved_in ISO
IBA		 (PMID:23095756)
GO_REF:0000033		 RGD
GO_Central		 PMID:23095756 GO_REF:0000033 NCBI chr 5:134,494,440...134,497,757
Ensembl chr 5:134,493,829...134,497,772 		JBrowse link
G Faap100 FA core complex associated protein 100 involved_in IEA GO_REF:0000002 InterPro GO_REF:0000002 NCBI chr10:105,641,677...105,653,809
Ensembl chr10:105,639,414...105,653,494 		JBrowse link
G Faap20 FA core complex associated protein 20 involved_in ISO
ISS		 (PMID:22266823), (PMID:22396592), (PMID:22705371)
GO_REF:0000024		 RGD
UniProt		 PMID:22266823 PMID:22396592 PMID:22705371 GO_REF:0000024 NCBI chr 5:165,808,370...165,815,291
Ensembl chr 5:165,808,657...165,815,333 		JBrowse link
G Faap24 FA core complex associated protein 24 involved_in ISO (PMID:20347429) RGD PMID:20347429 NCBI chr 1:88,051,523...88,057,997
Ensembl chr 1:88,051,911...88,057,989 		JBrowse link
G Fan1 FANCD2 and FANCI associated nuclease 1 involved_in ISO
IBA		 (PMID:25430771)
GO_REF:0000033		 RGD
GO_Central		 PMID:25430771 GO_REF:0000033 NCBI chr 1:127,327,098...127,356,807
Ensembl chr 1:117,917,099...117,944,977 		JBrowse link
G Fanca FA complementation group A involved_in IEA GO_REF:0000002 InterPro GO_REF:0000002 NCBI chr19:68,210,562...68,271,080
Ensembl chr19:51,304,021...51,362,527 		JBrowse link
G Fancb FA complementation group B involved_in IEA GO_REF:0000002 InterPro GO_REF:0000002 NCBI chr  X:29,403,771...29,420,484
Ensembl chr  X:29,403,771...29,420,192 		JBrowse link
G Fancc FA complementation group C involved_in IEA GO_REF:0000002 InterPro GO_REF:0000002 NCBI chr17:1,686,374...1,818,672
Ensembl chr17:1,681,324...1,829,376 		JBrowse link
G Fancd2 FA complementation group D2 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr 4:148,234,633...148,299,035
Ensembl chr 4:146,679,179...146,743,412 		JBrowse link
G Fance FA complementation group E involved_in IEA GO_REF:0000002 InterPro GO_REF:0000002 NCBI chr20:6,371,153...6,388,366
Ensembl chr20:6,375,573...6,386,631 		JBrowse link
G Fancf FA complementation group F involved_in IEA GO_REF:0000002 InterPro GO_REF:0000002 NCBI chr 1:110,585,054...110,587,870
Ensembl chr 1:101,450,389...101,451,923 		JBrowse link
G Fancg FA complementation group G involved_in IEA GO_REF:0000002 InterPro GO_REF:0000002 NCBI chr 5:62,027,494...62,037,202
Ensembl chr 5:57,231,685...57,240,029 		JBrowse link
G Fancl FA complementation group L involved_in IEA GO_REF:0000002 InterPro GO_REF:0000002 NCBI chr14:100,249,733...100,317,958
Ensembl chr14:100,248,875...100,314,255 		JBrowse link
G Fancm FA complementation group M involved_in ISO
IBA		 (PMID:20347429)
GO_REF:0000033		 RGD
GO_Central		 PMID:20347429 GO_REF:0000033 NCBI chr 6:88,862,898...88,916,701
Ensembl chr 6:83,127,093...83,180,028 		JBrowse link
G Firrm FIGNL1 interacting regulator of recombination and mitosis involved_in ISO
ISS		 (PMID:37256941)
GO_REF:0000024		 RGD
UniProt		 PMID:37256941 GO_REF:0000024 NCBI chr13:76,301,914...76,345,842
Ensembl chr13:76,301,918...76,345,804 		JBrowse link
G Hmces 5-hydroxymethylcytosine binding, ES cell specific involved_in ISS
ISO		 GO_REF:0000024
(PMID:33321094), (PMID:36608669), (PMID:37519246), (PMID:37950866)		 UniProt
RGD		 PMID:33321094 PMID:36608669 PMID:37519246 PMID:37950866 GO_REF:0000024 NCBI chr 4:120,392,812...120,415,616
Ensembl chr 4:120,366,542...120,415,616 		JBrowse link
G Hrob homologous recombination factor with OB-fold involved_in ISO
IEA
ISS		 (PMID:31467087)
GO_REF:0000107
GO_REF:0000024		 RGD
Ensembl
UniProt		 PMID:31467087 GO_REF:0000024 GO_REF:0000107 NCBI chr10:87,705,846...87,722,635
Ensembl chr10:87,206,049...87,222,483 		JBrowse link
G LOC120093168 nuclear ubiquitous casein and cyclin-dependent kinase substrate 1-like involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr 6:136,594,866...136,595,965
Ensembl chr 6:136,594,855...136,596,600 		JBrowse link
G Nucks1 nuclear casein kinase and cyclin-dependent kinase substrate 1 involved_in ISO
IBA		 (PMID:26323318)
GO_REF:0000033		 RGD
GO_Central		 PMID:26323318 GO_REF:0000033 NCBI chr13:43,345,091...43,374,316
Ensembl chr13:43,345,115...43,370,229 		JBrowse link
G Poln DNA polymerase nu involved_in ISO (PMID:19908865), (PMID:19995904) RGD PMID:19908865 PMID:19995904 NCBI chr14:76,579,983...76,752,460
Ensembl chr14:76,580,546...76,752,463 		JBrowse link
G Rad51 RAD51 recombinase involved_in ISO (PMID:26253028) RGD PMID:26253028 NCBI chr 3:126,554,210...126,578,888
Ensembl chr 3:106,100,381...106,125,035 		JBrowse link
G Rad51ap1 RAD51 associated protein 1 involved_in ISO
IBA		 (PMID:26323318)
GO_REF:0000033		 RGD
GO_Central		 PMID:26323318 GO_REF:0000033 NCBI chr 4:159,759,454...159,772,473
Ensembl chr 4:159,759,459...159,772,524 		JBrowse link
G Rad51d RAD51 paralog D acts_upstream_of_or_within ISO MGI:2386281 (PMID:15781618) RGD PMID:15781618 NCBI chr10:68,303,350...68,322,002
Ensembl chr10:67,740,712...67,824,434 		JBrowse link
G RFFL ring finger and FYVE like domain containing E3 ubiquitin protein ligase involved_in
acts_upstream_of_or_within		 IEA
ISO		 MGI:2386281 (PMID:15781618) Ensembl
RGD		 PMID:15781618 GO_REF:0000107
G Rfwd3 ring finger and WD repeat domain 3 involved_in ISO (PMID:28575657), (PMID:28575658), (PMID:33321094) RGD PMID:28575657 PMID:28575658 PMID:33321094 NCBI chr19:39,235,883...39,268,479
Ensembl chr19:39,236,787...39,268,479 		JBrowse link
G Sprtn SprT-like N-terminal domain involved_in ISO
IEA		 (PMID:36608669)
GO_REF:0000107		 RGD
Ensembl		 PMID:36608669 GO_REF:0000107 NCBI chr19:52,857,612...52,864,864
Ensembl chr19:52,857,866...52,864,864 		JBrowse link
G Vcp valosin-containing protein involved_in ISS GO_REF:0000024 UniProt GO_REF:0000024 NCBI chr 5:62,005,984...62,025,387
Ensembl chr 5:57,210,168...57,229,571 		JBrowse link
G Xrcc3 X-ray repair cross complementing 3 involved_in ISO (PMID:26323318) RGD PMID:26323318 NCBI chr 6:136,684,558...136,694,822
Ensembl chr 6:130,863,959...130,872,444 		JBrowse link
isotype switching term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Aicda activation-induced cytidine deaminase acts_upstream_of_or_within
involved_in		 ISO (PMID:17713479)
(PMID:21518874)		 RGD PMID:17713479 PMID:21518874 NCBI chr 4:157,446,120...157,455,958
Ensembl chr 4:155,774,132...155,783,972 		JBrowse link
G Atad5 ATPase family, AAA domain containing 5 acts_upstream_of ISO MGI:4127920 (PMID:25404367) RGD PMID:25404367 NCBI chr10:65,568,569...65,616,379
Ensembl chr10:65,070,689...65,117,845 		JBrowse link
G Batf basic leucine zipper ATF-like transcription factor involved_in ISS
ISO		 GO_REF:0000024
(PMID:20421391), (PMID:21572431)		 UniProt
RGD		 PMID:20421391 PMID:21572431 GO_REF:0000024 NCBI chr 6:105,353,715...105,376,051
Ensembl chr 6:105,353,715...105,376,051 		JBrowse link
G Cd40lg CD40 ligand involved_in IEA
ISO		 GO_REF:0000107
(PMID:7529792)		 Ensembl
RGD		 PMID:7529792 GO_REF:0000107 NCBI chr  X:140,164,341...140,176,057
Ensembl chr  X:135,126,969...135,138,306 		JBrowse link
G Ercc1 ERCC excision repair 1, endonuclease non-catalytic subunit acts_upstream_of_or_within ISO MGI:2183944 (PMID:15280420) RGD PMID:15280420 NCBI chr 1:88,099,308...88,135,966
Ensembl chr 1:78,996,390...79,007,963 		JBrowse link
G Exo1 exonuclease 1 acts_upstream_of_or_within ISO MGI:2653925 (PMID:14716311) RGD PMID:14716311 NCBI chr13:90,341,947...90,366,861
Ensembl chr13:87,809,810...87,834,654 		JBrowse link
G Exosc3 exosome component 3 involved_in ISO (PMID:21255825) RGD PMID:21255825 NCBI chr 5:59,573,849...59,579,065
Ensembl chr 5:59,573,886...59,579,060 		JBrowse link
G Exosc6 exosome component 6 involved_in ISO (PMID:21255825) RGD PMID:21255825 NCBI chr19:39,022,171...39,023,585
Ensembl chr19:39,022,183...39,023,515 		JBrowse link
G Lig4 DNA ligase 4 acts_upstream_of_or_within ISO MGI:1857732 (PMID:17713479) RGD PMID:17713479 NCBI chr16:79,518,393...79,526,956
Ensembl chr16:79,518,312...79,527,040 		JBrowse link
G Mlh1 mutL homolog 1 involved_in
acts_upstream_of_or_within		 IEA
ISO		 GO_REF:0000107
MGI:1857946 (PMID:12743174)		 Ensembl
RGD		 PMID:12743174 GO_REF:0000107 NCBI chr 8:120,074,871...120,112,109
Ensembl chr 8:111,196,468...111,233,617 		JBrowse link
G Msh2 mutS homolog 2 involved_in
acts_upstream_of_or_within		 IEA
ISO		 GO_REF:0000107
MGI:1857940|MGI:2151801 (PMID:10430621), (PMID:12743174)		 Ensembl
RGD		 PMID:10430621 PMID:12743174 GO_REF:0000107 NCBI chr 6:12,567,368...12,626,534
Ensembl chr 6:6,813,795...6,872,938 		JBrowse link
G Msh6 mutS homolog 6 acts_upstream_of_or_within ISO MGI:109352|MGI:3653701 (PMID:16618598), (PMID:17015724) RGD PMID:16618598 PMID:17015724 NCBI chr 6:12,316,190...12,333,505
Ensembl chr 6:6,562,632...6,579,956 		JBrowse link
G Nbn nibrin involved_in ISS
ISO
IEA		 GO_REF:0000024
(PMID:15668383)
GO_REF:0000107		 UniProt
RGD
Ensembl		 PMID:15668383 GO_REF:0000024 GO_REF:0000107 NCBI chr 5:34,256,678...34,291,163
Ensembl chr 5:29,459,457...29,494,150 		JBrowse link
G Nfkbiz NFKB inhibitor zeta involved_in ISO MGI:3046930|MGI:5501251 (PMID:25124037), (PMID:31182790) RGD PMID:25124037 PMID:31182790 NCBI chr11:44,782,676...44,810,722
Ensembl chr11:44,782,676...44,810,723 		JBrowse link
G Pcyt1a phosphate cytidylyltransferase 1A, choline involved_in ISS
ISO		 GO_REF:0000024
(PMID:19139091)		 UniProt
RGD		 PMID:19139091 GO_REF:0000024 NCBI chr11:68,313,860...68,357,828
Ensembl chr11:68,313,882...68,357,357 		JBrowse link
G Rnf168 ring finger protein 168 involved_in ISS
ISO		 GO_REF:0000024
(PMID:20080757)		 UniProt
RGD		 PMID:20080757 GO_REF:0000024 NCBI chr11:68,486,313...68,508,296
Ensembl chr11:68,486,321...68,508,277 		JBrowse link
G Rnf8 ring finger protein 8 involved_in ISS
ISO		 GO_REF:0000024
(PMID:20080757)		 UniProt
RGD		 PMID:20080757 GO_REF:0000024 NCBI chr20:7,682,258...7,710,448
Ensembl chr20:7,682,322...7,708,491 		JBrowse link
G Sanbr SANT and BTB domain regulator of CSR involved_in ISS
IBA
ISO
IEA		 GO_REF:0000024
GO_REF:0000033
(PMID:33831416)
GO_REF:0000107		 UniProt
GO_Central
RGD
Ensembl		 PMID:33831416 GO_REF:0000024 GO_REF:0000033 GO_REF:0000107 NCBI chr14:97,516,652...97,585,955
Ensembl chr14:97,516,413...97,581,346 		JBrowse link
G Swap70 switching B-cell complex subunit SWAP70 acts_upstream_of_or_within ISO (PMID:9642267) RGD PMID:9642267 NCBI chr 1:164,267,588...164,328,796
Ensembl chr 1:164,267,609...164,328,794 		JBrowse link
G Ung uracil-DNA glycosylase acts_upstream_of_or_within ISO MGI:1343961 (PMID:17015724) RGD PMID:17015724 NCBI chr12:48,145,838...48,154,789
Ensembl chr12:42,485,276...42,494,206 		JBrowse link
G Xrcc4 X-ray repair cross complementing 4 acts_upstream_of_or_within ISO MGI:1926771|MGI:3047571|MGI:3641440 (PMID:17713479) RGD PMID:17713479 NCBI chr 2:20,948,464...21,197,705
Ensembl chr 2:20,951,200...21,197,808 		JBrowse link
isotype switching to IgA isotypes term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ccr6 C-C motif chemokine receptor 6 involved_in ISO (PMID:27174992) RGD PMID:27174992 NCBI chr 1:55,022,037...55,055,857
Ensembl chr 1:52,474,168...52,498,603 		JBrowse link
isotype switching to IgD isotypes term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Fdcsp follicular dendritic cell secreted protein acts_upstream_of_positive_effect ISO MGI:7719862 (PMID:17548624) RGD PMID:17548624 NCBI chr14:20,447,761...20,453,227
Ensembl chr14:20,169,691...20,173,983 		JBrowse link
isotype switching to IgE isotypes term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Bcl6 BCL6, transcription repressor acts_upstream_of ISO MGI:103034|MGI:2158438 (PMID:10490661) RGD PMID:10490661 NCBI chr11:90,358,753...90,382,049
Ensembl chr11:76,854,090...76,877,389 		JBrowse link
G Fdcsp follicular dendritic cell secreted protein acts_upstream_of_or_within_negative_effect ISO MGI:7719862 (PMID:17548624) RGD PMID:17548624 NCBI chr14:20,447,761...20,453,227
Ensembl chr14:20,169,691...20,173,983 		JBrowse link
G Foxp3 forkhead box P3 acts_upstream_of ISO MGI:3696705 (PMID:16275384) RGD PMID:16275384 NCBI chr  X:17,580,380...17,601,181
Ensembl chr  X:14,908,494...14,923,838 		JBrowse link
G Il4 interleukin 4 acts_upstream_of ISO (PMID:14988498) RGD PMID:14988498 NCBI chr10:38,272,003...38,277,549
Ensembl chr10:37,771,203...37,776,750 		JBrowse link
G Stat6 signal transducer and activator of transcription 6 acts_upstream_of ISO MGI:107187 (PMID:10490661) RGD PMID:10490661 NCBI chr 7:63,480,229...63,497,551
Ensembl chr 7:63,479,642...63,498,495 		JBrowse link
isotype switching to IgG isotypes term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Fdcsp follicular dendritic cell secreted protein acts_upstream_of_or_within_negative_effect ISO MGI:7719862 (PMID:17548624) RGD PMID:17548624 NCBI chr14:20,447,761...20,453,227
Ensembl chr14:20,169,691...20,173,983 		JBrowse link
G Hspd1 heat shock protein family D (Hsp60) member 1 involved_in ISO (PMID:16148103) RGD PMID:16148103 NCBI chr 9:64,073,610...64,084,332
Ensembl chr 9:56,579,201...56,589,662 		JBrowse link
G Il4 interleukin 4 acts_upstream_of ISO (PMID:14988498) RGD PMID:14988498 NCBI chr10:38,272,003...38,277,549
Ensembl chr10:37,771,203...37,776,750 		JBrowse link
lagging strand elongation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Lig1 DNA ligase 1 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr 1:74,165,688...74,204,400
Ensembl chr 1:74,165,842...74,204,413 		JBrowse link
G Lig3 DNA ligase 3 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr10:67,717,808...67,741,141
Ensembl chr10:67,717,812...67,798,414 		JBrowse link
G Pola1 DNA polymerase alpha 1, catalytic subunit involved_in ISS
IBA
ISO		 GO_REF:0000024
GO_REF:0000033
(PMID:2175912), (PMID:7910375)		 UniProt
GO_Central
RGD		 PMID:2175912 PMID:7910375 GO_REF:0000024 GO_REF:0000033 NCBI chr  X:58,034,617...58,348,612
Ensembl chr  X:58,034,619...58,348,536 		JBrowse link
late meiotic recombination nodule assembly term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Mcmdc2 minichromosome maintenance domain containing 2 acts_upstream_of_or_within ISO MGI:2178050|MGI:5511194 (PMID:27760146) RGD PMID:27760146 NCBI chr 5:9,291,967...9,337,526
Ensembl chr 5:9,298,101...9,338,300 		JBrowse link
leading strand elongation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Pcna proliferating cell nuclear antigen involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr 3:119,499,039...119,502,911
Ensembl chr 3:119,498,810...119,502,995 		JBrowse link
G Pola1 DNA polymerase alpha 1, catalytic subunit involved_in ISS
IBA
ISO		 GO_REF:0000024
GO_REF:0000033
(PMID:2175912), (PMID:7910375)		 UniProt
GO_Central
RGD		 PMID:2175912 PMID:7910375 GO_REF:0000024 GO_REF:0000033 NCBI chr  X:58,034,617...58,348,612
Ensembl chr  X:58,034,619...58,348,536 		JBrowse link
G Pole DNA polymerase epsilon, catalytic subunit involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr12:52,005,155...52,053,761
Ensembl chr12:46,345,420...46,393,939 		JBrowse link
G Pole3 DNA polymerase epsilon 3, accessory subunit involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr 5:75,973,941...75,977,175
Ensembl chr 5:75,974,717...75,977,231
Ensembl chr 7:75,974,717...75,977,231 		JBrowse link
maintenance of DNA repeat elements term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Axin2 axin 2 involved_in IEA
ISO		 GO_REF:0000107
(PMID:18755497)		 Ensembl
RGD		 PMID:18755497 GO_REF:0000107 NCBI chr10:94,393,379...94,426,579
Ensembl chr10:93,899,245...93,926,231 		JBrowse link
G Msh2 mutS homolog 2 involved_in ISO
IEA		 (PMID:16388310)
GO_REF:0000107		 RGD
Ensembl		 PMID:16388310 GO_REF:0000107 NCBI chr 6:12,567,368...12,626,534
Ensembl chr 6:6,813,795...6,872,938 		JBrowse link
G Msh3 mutS homolog 3 involved_in ISO (PMID:16388310) RGD PMID:16388310 NCBI chr 2:25,179,400...25,320,857 JBrowse link
G Msh6 mutS homolog 6 NOT|involved_in ISO (PMID:16388310) RGD PMID:16388310 NCBI chr 6:12,316,190...12,333,505
Ensembl chr 6:6,562,632...6,579,956 		JBrowse link
G Tcf7l2 transcription factor 7 like 2 involved_in ISO (PMID:18755497) RGD PMID:18755497 NCBI chr 1:264,791,335...264,984,225
Ensembl chr 1:254,786,091...254,978,967 		JBrowse link
maintenance of rDNA term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Rmi2 RecQ mediated genome instability 2 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr10:4,829,333...4,837,264
Ensembl chr10:4,830,553...4,837,235 		JBrowse link
G Zmpste24 zinc metallopeptidase STE24 acts_upstream_of_or_within ISO MGI:2180033 (PMID:20961378) RGD PMID:20961378 NCBI chr 5:134,627,218...134,660,360
Ensembl chr 5:134,627,229...134,660,110 		JBrowse link
meiotic DNA double-strand break formation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Hormad1 HORMA domain containing 1 involved_in ISS
ISO		 GO_REF:0000024
(PMID:21079677), (PMID:21478856)		 UniProt
RGD		 PMID:21079677 PMID:21478856 GO_REF:0000024 NCBI chr 2:183,115,815...183,152,383
Ensembl chr 2:183,116,716...183,152,383 		JBrowse link
G Iho1 interactor of HORMAD1 1 involved_in IBA
ISO		 GO_REF:0000033
(PMID:27723721)		 GO_Central
RGD		 PMID:27723721 GO_REF:0000033 NCBI chr 8:109,091,134...109,126,386
Ensembl chr 8:109,092,758...109,125,434 		JBrowse link
G Mei4 meiotic double-stranded break formation protein 4 involved_in IBA
ISO		 GO_REF:0000033
(PMID:20551173)		 GO_Central
RGD		 PMID:20551173 GO_REF:0000033 NCBI chr 8:82,765,661...82,939,649
Ensembl chr 8:82,765,661...82,939,649 		JBrowse link
G Mre11 MRE11 homolog, double strand break repair nuclease involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr 8:19,900,211...19,961,906
Ensembl chr 8:11,632,354...11,678,279 		JBrowse link
G Rec114 REC114 meiotic recombination protein involved_in ISO (PMID:30569039) RGD PMID:30569039 NCBI chr 8:59,063,352...59,221,439
Ensembl chr 8:59,063,352...59,149,887 		JBrowse link
G Spo11 SPO11 initiator of meiotic double strand breaks involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr 3:161,755,299...161,770,930
Ensembl chr 3:161,757,519...161,770,925 		JBrowse link
G Top6bl TOP6B like initiator of meiotic double strand breaks involved_in ISO
IBA		 (PMID:26917764)
GO_REF:0000033		 RGD
GO_Central		 PMID:26917764 GO_REF:0000033 NCBI chr 1:211,331,973...211,419,015 JBrowse link
meiotic DNA double-strand break formation involved in reciprocal meiotic recombination term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ankrd31 ankyrin repeat domain 31 involved_in ISO (PMID:31000436), (PMID:31003867) RGD PMID:31000436 PMID:31003867 NCBI chr 2:29,793,882...29,987,621
Ensembl chr 2:28,092,882...28,241,719 		JBrowse link
meiotic DNA double-strand break processing term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Spo11 SPO11 initiator of meiotic double strand breaks involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr 3:161,755,299...161,770,930
Ensembl chr 3:161,757,519...161,770,925 		JBrowse link
meiotic DNA double-strand break processing involved in reciprocal meiotic recombination term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Brip1 BRCA1 interacting DNA helicase 1 acts_upstream_of_or_within ISO MGI:4129733 (PMID:26490168) RGD PMID:26490168 NCBI chr10:71,402,035...71,528,083
Ensembl chr10:70,907,371...71,030,324 		JBrowse link
G Six6os1 Six6 opposite strand transcript 1 involved_in IBA
ISO		 GO_REF:0000033
(PMID:27796301)		 GO_Central
RGD		 PMID:27796301 GO_REF:0000033 NCBI chr 6:91,579,185...91,615,183
Ensembl chr 6:91,579,325...91,615,148 		JBrowse link
meiotic DNA recombinase assembly term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Rad51c RAD51 paralog C involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr10:72,702,299...72,728,980
Ensembl chr10:72,205,032...72,231,248 		JBrowse link
meiotic DNA repair synthesis term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Spata22 spermatogenesis associated 22 acts_upstream_of_or_within ISO MGI:5314540 (PMID:22011390) RGD PMID:22011390 NCBI chr10:57,945,272...57,963,081
Ensembl chr10:57,932,187...57,963,081 		JBrowse link
G Sycp1 synaptonemal complex protein 1 involved_in
acts_upstream_of_or_within		 IEA
ISO
IBA		 GO_REF:0000107
MGI:109542|MGI:3580000 (PMID:22164254)
GO_REF:0000033		 Ensembl
RGD
GO_Central		 PMID:22164254 GO_REF:0000033 GO_REF:0000107 NCBI chr 2:190,296,688...190,456,687
Ensembl chr 2:190,296,954...190,456,737 		JBrowse link
G Sycp3 synaptonemal complex protein 3 acts_upstream_of_or_within ISO MGI:105931|MGI:1913904 (PMID:22164254) RGD PMID:22164254 NCBI chr 7:22,874,055...22,888,512
Ensembl chr 7:22,874,055...22,888,511 		JBrowse link
G Tex12 testis expressed 12 acts_upstream_of_or_within ISO MGI:109542|MGI:3811722 (PMID:22164254) RGD PMID:22164254 NCBI chr 8:50,908,161...50,913,202
Ensembl chr 8:50,909,052...50,913,217 		JBrowse link
meiotic gene conversion term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Prdm9 PR/SET domain 9 acts_upstream_of_or_within ISO (PMID:21750151) RGD PMID:21750151 NCBI chr 1:65,178,666...65,198,851
Ensembl chr 1:56,505,579...56,525,652 		JBrowse link
G Rnf212 ring finger protein 212 involved_in ISO (PMID:23396135), (PMID:24390283) RGD PMID:23396135 PMID:24390283 NCBI chr14:949,397...988,377
Ensembl chr14:949,448...987,831 		JBrowse link
G Tex11 testis expressed 11 involved_in ISO (PMID:18369460) RGD PMID:18369460 NCBI chr  X:65,932,904...66,196,525
Ensembl chr  X:65,932,988...66,196,187 		JBrowse link
meiotic joint molecule formation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Psmc3ip PSMC3 interacting protein involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr10:86,024,281...86,027,928
Ensembl chr10:86,023,950...86,027,423 		JBrowse link
meiotic recombination nodule assembly term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Mcmdc2 minichromosome maintenance domain containing 2 acts_upstream_of_or_within ISO MGI:2178050|MGI:5511194 (PMID:27760146) RGD PMID:27760146 NCBI chr 5:9,291,967...9,337,526
Ensembl chr 5:9,298,101...9,338,300 		JBrowse link
meiotic strand invasion involved in reciprocal meiotic recombination term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Psmc3ip PSMC3 interacting protein involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr10:86,024,281...86,027,928
Ensembl chr10:86,023,950...86,027,423 		JBrowse link
mismatch repair term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Exo1 exonuclease 1 involved_in ISO
IBA		 UniProtKB:P43246 (PMID:11809771), (PMID:14636568), (PMID:9788596)
GO_REF:0000033		 RGD
GO_Central		 PMID:9788596 PMID:11809771 PMID:14636568 GO_REF:0000033 NCBI chr13:90,341,947...90,366,861
Ensembl chr13:87,809,810...87,834,654 		JBrowse link
G Mlh1 mutL homolog 1 involved_in
acts_upstream_of_or_within		 IEA
ISO
IBA		 GO_REF:0000002
MGI:1857946|MGI:1858054|MGI:1930998 (PMID:10096563), (PMID:10359802), (PMID:10429667), (PMID:10657972), (PMID:10747038), (PMID:10851078), (PMID:11313994), (PMID:16204034), (PMID:16728433), (PMID:8674118), (PMID:9500552), (PMID:9560238)
GO_REF:0000033
GO_REF:0000107
UniProtKB:P43246|UniProtKB:P52701 (PMID:23603115)		 InterPro
RGD
GO_Central
Ensembl		 PMID:8674118 PMID:9500552 PMID:9560238 PMID:10096563 PMID:10359802 More... GO_REF:0000002 GO_REF:0000033 GO_REF:0000107 NCBI chr 8:120,074,871...120,112,109
Ensembl chr 8:111,196,468...111,233,617 		JBrowse link
G Mlh3 mutL homolog 3 involved_in
acts_upstream_of_or_within		 IBA
ISO		 GO_REF:0000033
MGI:104288|MGI:2384218 (PMID:16204034)		 GO_Central
RGD		 PMID:16204034 GO_REF:0000033 NCBI chr 6:110,612,535...110,649,408
Ensembl chr 6:104,881,483...104,917,728 		JBrowse link
G Msh2 mutS homolog 2 involved_in
acts_upstream_of_or_within		 IEA
ISO
IBA		 GO_REF:0000104
MGI:109519|MGI:1857940|MGI:1858055|MGI:2151801|MGI:2389314|MGI:2680817 (PMID:10581038), (PMID:10874005), (PMID:10992298), (PMID:11046134), (PMID:11890935), (PMID:12531017), (PMID:14744764), (PMID:16728433), (PMID:17331550), (PMID:23071719), (PMID:7628020), (PMID:8706033), (PMID:9157971), (PMID:9244348), (PMID:9288110), (PMID:9697842)
GO_REF:0000033
(PMID:7923193), (PMID:9677427)
UniProtKB:P40692|UniProtKB:P52701 (PMID:11555625), (PMID:23603115)		 UniProt
RGD
GO_Central		 PMID:7628020 PMID:7923193 PMID:8706033 PMID:9157971 PMID:9244348 More... GO_REF:0000033 GO_REF:0000104 NCBI chr 6:12,567,368...12,626,534
Ensembl chr 6:6,813,795...6,872,938 		JBrowse link
G Msh3 mutS homolog 3 involved_in
acts_upstream_of_or_within		 ISO (PMID:8782829), (PMID:9677427)
MGI:101816|MGI:1343961|MGI:1858056|MGI:88039 (PMID:10706084), (PMID:11691815), (PMID:16728433)		 RGD PMID:8782829 PMID:9677427 PMID:10706084 PMID:11691815 PMID:16728433 NCBI chr 2:25,179,400...25,320,857 JBrowse link
G Msh4 mutS homolog 4 involved_in IEA GO_REF:0000002 InterPro GO_REF:0000002 NCBI chr 2:245,445,118...245,504,493
Ensembl chr 2:242,792,661...242,843,487 		JBrowse link
G Msh5 mutS homolog 5 involved_in IEA GO_REF:0000002 InterPro GO_REF:0000002 NCBI chr20:3,779,180...3,797,996
Ensembl chr20:3,776,942...3,793,336 		JBrowse link
G Msh6 mutS homolog 6 involved_in
acts_upstream_of_or_within		 ISO
IBA
IMP		 (PMID:10871409), (PMID:23622243), (PMID:8782829)
GO_REF:0000033
MGI:109519|MGI:1858014|MGI:2151803|MGI:3653701|MGI:88039 (PMID:11691815), (PMID:12370835), (PMID:15324697), (PMID:16728433), (PMID:23071719), (PMID:9390556)
UniProtKB:P40692|UniProtKB:P43246 (PMID:23603115)		 RGD
GO_Central		 PMID:8782829 PMID:9390556 PMID:10871409 PMID:11691815 PMID:12370835 More... GO_REF:0000033, RGD:2292505 NCBI chr 6:12,316,190...12,333,505
Ensembl chr 6:6,562,632...6,579,956 		JBrowse link
G Mutyh mutY DNA glycosylase involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr 5:135,510,666...135,522,777
Ensembl chr 5:130,274,122...130,286,146 		JBrowse link
G Pcna proliferating cell nuclear antigen involved_in ISO
IBA		 (PMID:11005803)
GO_REF:0000033		 RGD
GO_Central		 PMID:11005803 GO_REF:0000033 NCBI chr 3:119,499,039...119,502,911
Ensembl chr 3:119,498,810...119,502,995 		JBrowse link
G Pms1 PMS1 homolog 1, mismatch repair system component involved_in
acts_upstream_of_or_within		 IBA
ISO		 GO_REF:0000033
MGI:1857948 (PMID:9500552)		 GO_Central
RGD		 PMID:9500552 GO_REF:0000033 NCBI chr 9:55,721,393...55,832,225
Ensembl chr 9:48,253,410...48,340,237 		JBrowse link
G Pms2 PMS1 homolog 2, mismatch repair system component involved_in
acts_upstream_of_or_within		 ISO
IBA		 (PMID:10871409), (PMID:23709753), (PMID:9618520)
MGI:1353455|MGI:1857946|MGI:1857947 (PMID:10359802), (PMID:10429667), (PMID:11313994), (PMID:16204034), (PMID:16728433), (PMID:23071719), (PMID:9500552)
GO_REF:0000033		 RGD
GO_Central		 PMID:9500552 PMID:9618520 PMID:10359802 PMID:10429667 PMID:10871409 More... GO_REF:0000033 NCBI chr12:15,790,478...15,814,790
Ensembl chr12:10,676,764...10,701,066 		JBrowse link
G Rnaseh2a ribonuclease H2, subunit A acts_upstream_of_or_within
involved_in		 ISO
IBA		 (PMID:23603115)
GO_REF:0000033		 RGD
GO_Central		 PMID:23603115 GO_REF:0000033 NCBI chr19:23,186,325...23,196,045
Ensembl chr19:23,186,383...23,196,041 		JBrowse link
G Rpa1 replication protein A1 involved_in ISO (PMID:9430682) RGD PMID:9430682 NCBI chr10:60,148,869...60,199,970
Ensembl chr10:60,148,793...60,199,949 		JBrowse link
G Rpa2 replication protein A2 involved_in ISS
ISO		 GO_REF:0000024
(PMID:9430682)		 UniProt
RGD		 PMID:9430682 GO_REF:0000024 NCBI chr 5:144,976,789...144,989,445
Ensembl chr 5:144,976,748...144,987,350 		JBrowse link
G Rpa3 replication protein A3 involved_in ISO
IBA		 (PMID:9430682)
GO_REF:0000033		 RGD
GO_Central		 PMID:9430682 GO_REF:0000033 NCBI chr 4:36,304,649...36,307,755
Ensembl chr 4:36,304,651...36,307,709 		JBrowse link
G Rpa3l1 replication protein A3 like 1 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr12:45,908,653...45,909,063
Ensembl chr12:45,908,683...45,909,048 		JBrowse link
G Setd2 SET domain containing 2, histone lysine methyltransferase involved_in ISO (PMID:23622243) RGD PMID:23622243 NCBI chr 8:119,390,207...119,475,863
Ensembl chr 8:110,511,772...110,597,489 		JBrowse link
G Xpc XPC complex subunit, DNA damage recognition and repair factor involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr 4:125,550,833...125,578,084
Ensembl chr 4:123,993,666...124,021,010 		JBrowse link
mismatch repair involved in maintenance of fidelity involved in DNA-dependent DNA replication term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Mcm9 minichromosome maintenance 9 homologous recombination repair factor involved_in ISO
IEA		 (PMID:26300262)
GO_REF:0000107		 RGD
Ensembl		 PMID:26300262 GO_REF:0000107 NCBI chr20:32,818,219...32,929,577
Ensembl chr20:32,844,951...32,929,600 		JBrowse link
mitochondrial DNA catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Endog endonuclease G involved_in ISO (PMID:29719607) RGD PMID:29719607 NCBI chr 3:13,449,113...13,451,715
Ensembl chr 3:13,449,086...13,451,932 		JBrowse link
mitochondrial DNA metabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Cfh complement factor H acts_upstream_of_or_within ISO (PMID:30705315) RGD PMID:30705315 NCBI chr13:54,063,079...54,164,523
Ensembl chr13:51,511,828...51,613,838 		JBrowse link
G Mtnap1 mitochondrial nucleoid associated protein 1 involved_in ISO (PMID:37676315) RGD PMID:37676315 NCBI chr10:98,728,661...98,738,693
Ensembl chr10:98,727,763...98,738,691 		JBrowse link
G Parp1 poly (ADP-ribose) polymerase 1 acts_upstream_of_or_within ISO (PMID:25378300) RGD PMID:25378300 NCBI chr13:94,839,484...94,871,295
Ensembl chr13:92,307,586...92,339,404 		JBrowse link
G Polg2 DNA polymerase gamma 2, accessory subunit acts_upstream_of_or_within ISO MGI:5470227 (PMID:23197651) RGD PMID:23197651 NCBI chr10:92,212,303...92,222,849
Ensembl chr10:91,712,586...91,723,008 		JBrowse link
G Sesn2 sestrin 2 acts_upstream_of_or_within ISO MGI:3587950 (PMID:22958918) RGD PMID:22958918 NCBI chr 5:149,986,304...150,005,255
Ensembl chr 5:144,701,530...144,721,260 		JBrowse link
G Tk2 thymidine kinase 2 acts_upstream_of_or_within ISO MGI:3808750 (PMID:18467430) RGD PMID:18467430 NCBI chr19:708,859...731,786
Ensembl chr19:708,891...730,924 		JBrowse link
G Top3a DNA topoisomerase III alpha involved_in ISO (PMID:29290614) RGD PMID:29290614 NCBI chr10:45,419,219...45,457,356
Ensembl chr10:45,419,217...45,457,559 		JBrowse link
mitochondrial DNA repair term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Chchd4 coiled-coil-helix-coiled-coil-helix domain containing 4 acts_upstream_of_or_within ISO (PMID:24101517) RGD PMID:24101517 NCBI chr 4:123,968,264...123,977,398
Ensembl chr 4:123,968,265...123,977,414
Ensembl chr 1:123,968,265...123,977,414 		JBrowse link
G Dna2 DNA replication helicase/nuclease 2 involved_in IEA GO_REF:0000107 Ensembl GO_REF:0000107 NCBI chr20:25,661,652...25,690,598
Ensembl chr20:25,662,055...25,716,319 		JBrowse link
G Lig3 DNA ligase 3 involved_in
acts_upstream_of_or_within		 ISO (PMID:21390132)
(PMID:24674627)
(PMID:21390131), (PMID:21390132)		 RGD PMID:21390131 PMID:21390132 PMID:24674627 NCBI chr10:67,717,808...67,741,141
Ensembl chr10:67,717,812...67,798,414 		JBrowse link
G Mgme1 mitochondrial genome maintenance exonuclease 1 involved_in IEA GO_REF:0000104 UniProt GO_REF:0000104 NCBI chr 3:131,640,770...131,649,933
Ensembl chr 3:131,640,944...131,649,932 		JBrowse link
G Neurl4 neuralized E3 ubiquitin protein ligase 4 acts_upstream_of_or_within ISO MGI:5296072 (PMID:35157000) RGD PMID:35157000 NCBI chr10:54,624,923...54,637,262
Ensembl chr10:54,625,642...54,637,258 		JBrowse link
G Parp1 poly (ADP-ribose) polymerase 1 acts_upstream_of_or_within ISO (PMID:25378300) RGD PMID:25378300 NCBI chr13:94,839,484...94,871,295
Ensembl chr13:92,307,586...92,339,404 		JBrowse link
G Primpol primase and DNA directed polymerase involved_in ISO (PMID:29073063) RGD PMID:29073063 NCBI chr16:45,681,252...45,715,758
Ensembl chr16:45,681,326...45,715,565 		JBrowse link
G Tp53 tumor protein p53 involved_in
acts_upstream_of_or_within		 IEA
ISO		 GO_REF:0000107
MGI:3528279 (PMID:24101517)		 Ensembl
RGD		 PMID:24101517 GO_REF:0000107 NCBI chr10:54,798,871...54,810,300
Ensembl chr10:54,300,048...54,311,524 		JBrowse link
mitochondrial DNA replication term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Dna2 DNA replication helicase/nuclease 2 involved_in IEA GO_REF:0000107 Ensembl GO_REF:0000107 NCBI chr20:25,661,652...25,690,598
Ensembl chr20:25,662,055...25,716,319 		JBrowse link
G Dnaja3 DnaJ heat shock protein family (Hsp40) member A3 acts_upstream_of_or_within ISO MGI:2182091|MGI:3040717 (PMID:16327803) RGD PMID:16327803 NCBI chr10:10,854,732...10,880,171
Ensembl chr10:10,854,732...10,880,161 		JBrowse link
G Mgme1 mitochondrial genome maintenance exonuclease 1 involved_in ISO (PMID:23313956) RGD PMID:23313956 NCBI chr 3:131,640,770...131,649,933
Ensembl chr 3:131,640,944...131,649,932 		JBrowse link
G Polg DNA polymerase gamma, catalytic subunit involved_in
acts_upstream_of_or_within		 ISO
IBA
IEA		 (PMID:19837034), (PMID:26554610)
(PMID:26095671)
MGI:3584444 (PMID:15888483)
GO_REF:0000033
GO_REF:0000107		 RGD
GO_Central
Ensembl		 PMID:15888483 PMID:19837034 PMID:26095671 PMID:26554610 GO_REF:0000033 GO_REF:0000107 NCBI chr 1:142,792,119...142,808,933
Ensembl chr 1:133,382,766...133,398,567 		JBrowse link
G Polg2 DNA polymerase gamma 2, accessory subunit involved_in
acts_upstream_of_or_within		 ISO
IBA		 (PMID:19837034)
MGI:5470227 (PMID:23197651)
GO_REF:0000033		 RGD
GO_Central		 PMID:19837034 PMID:23197651 GO_REF:0000033 NCBI chr10:92,212,303...92,222,849
Ensembl chr10:91,712,586...91,723,008 		JBrowse link
G Primpol primase and DNA directed polymerase involved_in ISO
IBA		 (PMID:24207056)
GO_REF:0000033		 RGD
GO_Central		 PMID:24207056 GO_REF:0000033 NCBI chr16:45,681,252...45,715,758
Ensembl chr16:45,681,326...45,715,565 		JBrowse link
G Rnaseh1 ribonuclease H1 acts_upstream_of_or_within ISO MGI:2655784 (PMID:12667461) RGD PMID:12667461 NCBI chr 6:45,282,849...45,292,258
Ensembl chr 6:45,282,854...45,292,236 		JBrowse link
G Rrm1 ribonucleotide reductase catalytic subunit M1 involved_in ISO (PMID:17486094) RGD PMID:17486094 NCBI chr 1:166,235,904...166,260,206
Ensembl chr 1:156,823,960...156,848,261 		JBrowse link
G Rrm2b ribonucleotide reductase regulatory TP53 inducible subunit M2B involved_in
acts_upstream_of_or_within		 ISO (PMID:17486094)
MGI:2672883 (PMID:17486094)		 RGD PMID:17486094 NCBI chr 7:70,962,008...70,993,726
Ensembl chr 7:69,078,291...69,108,633 		JBrowse link
G Tefm transcription elongation factor, mitochondrial NOT|involved_in ISO (PMID:21278163) RGD PMID:21278163 NCBI chr10:65,119,657...65,124,233
Ensembl chr10:65,119,659...65,124,486 		JBrowse link
G Tk2 thymidine kinase 2 acts_upstream_of_or_within ISO MGI:3802583 (PMID:18434326) RGD PMID:18434326 NCBI chr19:708,859...731,786
Ensembl chr19:708,891...730,924 		JBrowse link
G Twnk twinkle mtDNA helicase involved_in ISO
IBA		 (PMID:18971204)
GO_REF:0000033		 RGD
GO_Central		 PMID:18971204 GO_REF:0000033 NCBI chr 1:253,817,074...253,823,958
Ensembl chr 1:243,868,330...243,874,802 		JBrowse link
mitochondrial double-strand break repair via homologous recombination term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Mre11 MRE11 homolog, double strand break repair nuclease involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr 8:19,900,211...19,961,906
Ensembl chr 8:11,632,354...11,678,279 		JBrowse link
mitotic DNA replication initiation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G AC129365.1 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 Ensembl chr 2:141,551,434...141,554,016 JBrowse link
G Gins3 GINS complex subunit 3 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr19:9,420,085...9,428,621
Ensembl chr19:9,420,086...9,428,687 		JBrowse link
G Mcm2 minichromosome maintenance complex component 2 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr 4:121,346,434...121,360,962
Ensembl chr 4:121,346,434...121,360,847 		JBrowse link
G Mcm3 minichromosome maintenance complex component 3 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr 9:23,219,169...23,237,314
Ensembl chr 9:23,219,169...23,237,314 		JBrowse link
G Mcm4 minichromosome maintenance complex component 4 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr11:85,258,443...85,272,144
Ensembl chr11:85,258,443...85,272,144 		JBrowse link
G Pola1 DNA polymerase alpha 1, catalytic subunit involved_in IEA
IBA		 GO_REF:0000002
GO_REF:0000033		 InterPro
GO_Central		 GO_REF:0000002 GO_REF:0000033 NCBI chr  X:58,034,617...58,348,612
Ensembl chr  X:58,034,619...58,348,536 		JBrowse link
mitotic DNA replication termination term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Rtfdc1 replication termination factor 2 domain containing 1 involved_in IEA GO_REF:0000002 InterPro GO_REF:0000002 NCBI chr 3:161,208,005...161,237,687
Ensembl chr 3:161,208,049...161,237,687 		JBrowse link
mitotic DNA-templated DNA replication term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Recql5 RecQ like helicase 5 involved_in ISO (PMID:28575661) RGD PMID:28575661 NCBI chr10:101,126,544...101,165,739
Ensembl chr10:101,126,547...101,165,652 		JBrowse link
mitotic recombination term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Blm BLM RecQ like helicase acts_upstream_of ISO MGI:1857708|MGI:2158669|MGI:2158670|MGI:3053044|MGI:3663359 (PMID:11101838), (PMID:17210642), (PMID:9808625) RGD PMID:9808625 PMID:11101838 PMID:17210642 NCBI chr 1:143,819,072...143,905,300
Ensembl chr 1:134,409,857...134,484,312 		JBrowse link
G Dmc1 DNA meiotic recombinase 1 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr 7:111,124,888...111,167,465
Ensembl chr 7:111,124,888...111,167,952 		JBrowse link
G Ercc1 ERCC excision repair 1, endonuclease non-catalytic subunit involved_in ISO
IBA		 (PMID:8811092)
GO_REF:0000033		 RGD
GO_Central		 PMID:8811092 GO_REF:0000033 NCBI chr 1:88,099,308...88,135,966
Ensembl chr 1:78,996,390...79,007,963 		JBrowse link
G Msh2 mutS homolog 2 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr 6:12,567,368...12,626,534
Ensembl chr 6:6,813,795...6,872,938 		JBrowse link
G Rad52 RAD52 homolog, DNA repair protein involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr 4:153,106,062...153,128,598
Ensembl chr 4:153,106,062...153,128,207 		JBrowse link
mitotic recombination-dependent replication fork processing term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Brca2 BRCA2, DNA repair associated involved_in IEA
ISO		 GO_REF:0000107
(PMID:21076401)		 Ensembl
RGD		 PMID:21076401 GO_REF:0000107 NCBI chr12:4,895,092...4,939,340
Ensembl chr12:59,819...100,567 		JBrowse link
G Rad51 RAD51 recombinase involved_in IEA GO_REF:0000002 InterPro GO_REF:0000002 NCBI chr 3:126,554,210...126,578,888
Ensembl chr 3:106,100,381...106,125,035 		JBrowse link
mitotic telomere maintenance via semi-conservative replication term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Pcna proliferating cell nuclear antigen involved_in ISO UniProtKB:Q0VGM9 (PMID:24115439) RGD PMID:24115439 NCBI chr 3:119,499,039...119,502,911
Ensembl chr 3:119,498,810...119,502,995 		JBrowse link
G Rtel1 regulator of telomere elongation helicase 1 involved_in ISO (PMID:24115439) RGD PMID:24115439 NCBI chr 3:168,427,247...168,465,349
Ensembl chr 3:168,419,579...168,465,348 		JBrowse link
negative regulation of apoptotic DNA fragmentation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Dffa DNA fragmentation factor subunit alpha acts_upstream_of_or_within
involved_in		 ISO (PMID:15572351)
MGI:2179456 (PMID:10601318), (PMID:14663139)
(PMID:11371636)		 RGD PMID:10601318 PMID:11371636 PMID:14663139 PMID:15572351 NCBI chr 5:159,540,715...159,553,639
Ensembl chr 5:159,540,715...159,553,633 		JBrowse link
G Dffb DNA fragmentation factor subunit beta involved_in ISO
IEA		 (PMID:11371636)
GO_REF:0000107		 RGD
Ensembl		 PMID:11371636 GO_REF:0000107 NCBI chr 5:164,522,446...164,534,733
Ensembl chr 5:164,522,463...164,534,628 		JBrowse link
G Nmnat1 nicotinamide nucleotide adenylyltransferase 1 IMP RGD PMID:27184051 RGD:13781945 NCBI chr 5:159,910,242...159,928,201
Ensembl chr 5:159,910,242...159,928,180 		JBrowse link
G Pam16 presequence translocase associated motor 16 IDA RGD PMID:24069394 RGD:13462066 NCBI chr10:10,942,534...10,950,654
Ensembl chr10:10,943,001...10,950,649 		JBrowse link
negative regulation of deoxyribonuclease activity term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Dffa DNA fragmentation factor subunit alpha involved_in ISO (PMID:19944011) RGD PMID:19944011 NCBI chr 5:159,540,715...159,553,639
Ensembl chr 5:159,540,715...159,553,633 		JBrowse link
negative regulation of DNA biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Adipoq adiponectin, C1Q and collagen domain containing involved_in ISS
ISO		 GO_REF:0000024
(PMID:12070119)		 UniProt
RGD		 PMID:12070119 GO_REF:0000024 NCBI chr11:91,226,524...91,240,244
Ensembl chr11:77,721,912...77,735,564 		JBrowse link
G Ahr aryl hydrocarbon receptor IDA
IMP		 RGD PMID:12193573 PMID:17952121 RGD:625678, RGD:405878083 NCBI chr 6:57,961,423...57,998,901
Ensembl chr 6:52,234,089...52,271,568 		JBrowse link
G Ankrd1 ankyrin repeat domain 1 involved_in ISO
IEA		 (PMID:11139470)
GO_REF:0000107		 RGD
Ensembl		 PMID:11139470 GO_REF:0000107 NCBI chr 1:233,815,851...233,834,891
Ensembl chr 1:233,815,851...233,834,919 		JBrowse link
G Cdkn1a cyclin-dependent kinase inhibitor 1A involved_in ISO (PMID:11595739) RGD PMID:11595739 NCBI chr20:7,150,820...7,161,373
Ensembl chr20:7,149,217...7,159,585 		JBrowse link
G Chek1 checkpoint kinase 1 IMP RGD PMID:12429946 RGD:2316115 NCBI chr 8:36,420,565...36,443,477
Ensembl chr 8:36,420,569...36,441,009 		JBrowse link
G Dach1 dachshund family transcription factor 1 involved_in ISO (PMID:16980615) RGD PMID:16980615 NCBI chr15:74,528,122...74,909,811
Ensembl chr15:74,529,208...74,909,922 		JBrowse link
G Dnajc2 DnaJ heat shock protein family (Hsp40) member C2 involved_in
acts_upstream_of_or_within		 IEA
ISO		 GO_REF:0000107
(PMID:7559602)		 Ensembl
RGD		 PMID:7559602 GO_REF:0000107 NCBI chr 4:13,270,239...13,297,438
Ensembl chr 4:13,270,191...13,297,431 		JBrowse link
G Dusp1 dual specificity phosphatase 1 IDA RGD PMID:10446064 RGD:7771571 NCBI chr10:17,184,853...17,187,646 JBrowse link
G Gja1 gap junction protein, alpha 1 IDA RGD PMID:14702389 RGD:8662403 NCBI chr20:36,302,490...36,315,010
Ensembl chr20:35,755,991...35,768,582 		JBrowse link
G Kcnk2 potassium two pore domain channel subfamily K member 2 IMP RGD PMID:23271285 RGD:9831181 NCBI chr13:100,766,101...100,963,435
Ensembl chr13:100,766,113...100,963,435 		JBrowse link
G Niban2 niban apoptosis regulator 2 involved_in ISO (PMID:14602737), (PMID:17569660), (PMID:20032057) RGD PMID:14602737 PMID:17569660 PMID:20032057 NCBI chr 3:16,174,674...16,224,293
Ensembl chr 3:16,174,659...16,224,293 		JBrowse link
G Nppc natriuretic peptide C IDA RGD PMID:12746286 RGD:1580115 NCBI chr 9:94,767,986...94,772,186
Ensembl chr 9:87,320,051...87,324,251 		JBrowse link
G Rgn regucalcin IMP RGD PMID:11500948 RGD:9590199 NCBI chr  X:4,172,537...4,190,112
Ensembl chr  X:1,619,032...1,634,450 		JBrowse link
G Tp53 tumor protein p53 IMP RGD PMID:11502571 RGD:70312 NCBI chr10:54,798,871...54,810,300
Ensembl chr10:54,300,048...54,311,524 		JBrowse link
negative regulation of DNA catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Rgn regucalcin IDA RGD PMID:2001740 RGD:9590215 NCBI chr  X:4,172,537...4,190,112
Ensembl chr  X:1,619,032...1,634,450 		JBrowse link
negative regulation of DNA endoreduplication term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Fbxo5 F-box protein 5 involved_in ISO (PMID:17875940) RGD PMID:17875940 NCBI chr 1:42,196,068...42,202,437
Ensembl chr 1:42,196,068...42,202,437 		JBrowse link
negative regulation of DNA metabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Sub1 SUB1 regulator of transcription involved_in ISO (PMID:28369605) RGD PMID:28369605 NCBI chr 2:61,005,646...61,020,486
Ensembl chr 2:61,005,666...61,020,436
Ensembl chr 2:61,005,666...61,020,436 		JBrowse link
negative regulation of DNA recombination term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Blm BLM RecQ like helicase involved_in ISO (PMID:9671747) RGD PMID:9671747 NCBI chr 1:143,819,072...143,905,300
Ensembl chr 1:134,409,857...134,484,312 		JBrowse link
G H1f0 H1.0 linker histone involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr 7:110,592,834...110,594,694
Ensembl chr 7:110,592,208...110,594,694 		JBrowse link
G H1f1 H1.1 linker histone, cluster member involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr17:41,366,268...41,367,011
Ensembl chr17:41,366,268...41,367,011 		JBrowse link
G H1f10 H1.10 linker histone involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr 4:120,440,515...120,441,578
Ensembl chr 4:120,440,870...120,441,448 		JBrowse link
G H1f2 H1.2 linker histone, cluster member involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr17:41,391,106...41,392,597
Ensembl chr17:41,388,477...41,392,635 		JBrowse link
G H1f4 H1.4 linker histone, cluster member involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr17:41,486,574...41,487,355
Ensembl chr17:41,486,560...41,487,403 		JBrowse link
G H1f5 H1.5 linker histone, cluster member involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr17:42,726,132...42,727,162
Ensembl chr17:42,726,127...42,769,160 		JBrowse link
G H1f6 H1.6 linker histone, cluster member involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr17:41,427,365...41,428,109
Ensembl chr17:41,427,323...41,428,119 		JBrowse link
G H1f7 H1.7 linker histone involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr 7:129,408,521...129,409,888
Ensembl chr 7:129,408,359...129,409,930 		JBrowse link
G H1f8 H1.8 linker histone involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr 4:148,993,133...148,998,254
Ensembl chr 4:148,993,133...148,998,254 		JBrowse link
G H4f3 H1.3 linker histone, cluster member involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr17:41,551,524...41,552,303
Ensembl chr17:41,529,667...41,552,334 		JBrowse link
G Hils1 histone linker H1 domain, spermatid-specific 1 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr10:79,913,525...79,914,321
Ensembl chr10:79,913,480...79,914,321 		JBrowse link
G Lig3 DNA ligase 3 acts_upstream_of_or_within ISO MGI:3629052 (PMID:16648486) RGD PMID:16648486 NCBI chr10:67,717,808...67,741,141
Ensembl chr10:67,717,812...67,798,414 		JBrowse link
G Msh2 mutS homolog 2 involved_in
acts_upstream_of_or_within		 ISO
IEA		 (PMID:17715146)
MGI:1858055 (PMID:10545954), (PMID:7628020)
GO_REF:0000107		 RGD
Ensembl		 PMID:7628020 PMID:10545954 PMID:17715146 GO_REF:0000107 NCBI chr 6:12,567,368...12,626,534
Ensembl chr 6:6,813,795...6,872,938 		JBrowse link
G Msh3 mutS homolog 3 involved_in ISO (PMID:17715146) RGD PMID:17715146 NCBI chr 2:25,179,400...25,320,857 JBrowse link
G Msh6 mutS homolog 6 involved_in
acts_upstream_of_or_within		 ISO (PMID:17715146)
MGI:2151803 (PMID:10545954)		 RGD PMID:10545954 PMID:17715146 NCBI chr 6:12,316,190...12,333,505
Ensembl chr 6:6,562,632...6,579,956 		JBrowse link
G Rad18 RAD18 E3 ubiquitin protein ligase acts_upstream_of_or_within ISO MGI:3835812 (PMID:12509447) RGD PMID:12509447 NCBI chr 4:145,735,654...145,821,102
Ensembl chr 4:145,735,654...145,821,069 		JBrowse link
G Rtel1 regulator of telomere elongation helicase 1 involved_in IBA
ISO		 GO_REF:0000033
(PMID:22579284)		 GO_Central
RGD		 PMID:22579284 GO_REF:0000033 NCBI chr 3:168,427,247...168,465,349
Ensembl chr 3:168,419,579...168,465,348 		JBrowse link
negative regulation of DNA recombination at telomere term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Pot1b protection of telomeres 1B involved_in IEA GO_REF:0000107 Ensembl GO_REF:0000107 NCBI chr 9:9,670,355...9,728,624
Ensembl chr 9:9,670,362...9,728,532 		JBrowse link
G Terf2ip TERF2 interacting protein involved_in ISS
ISO		 GO_REF:0000024
(PMID:20339076), (PMID:20622869)		 UniProt
RGD		 PMID:20339076 PMID:20622869 GO_REF:0000024 NCBI chr19:39,976,965...39,984,055
Ensembl chr19:39,976,906...39,984,064 		JBrowse link
negative regulation of DNA repair term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Cgas cyclic GMP-AMP synthase involved_in ISO (PMID:35210392) RGD PMID:35210392 NCBI chr 8:79,292,282...79,306,998
Ensembl chr 8:79,294,511...79,305,496 		JBrowse link
G Rps3 ribosomal protein S3 involved_in ISO (PMID:17049931) RGD PMID:17049931 NCBI chr 1:153,778,363...153,783,663
Ensembl chr 1:153,777,472...153,783,680 		JBrowse link
negative regulation of DNA replication term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Atr ATR serine/threonine kinase involved_in ISO (PMID:14657349) RGD PMID:14657349 NCBI chr 8:96,426,704...96,524,152
Ensembl chr 8:96,426,724...96,524,136 		JBrowse link
G Enpp7 ectonucleotide pyrophosphatase/phosphodiesterase 7 involved_in ISO (PMID:12671034) RGD PMID:12671034 NCBI chr10:104,740,763...104,745,760
Ensembl chr10:104,242,223...104,246,589 		JBrowse link
G Gmnn geminin, DNA replication inhibitor involved_in ISO (PMID:9635433)
(PMID:12192004)		 RGD PMID:9635433 PMID:12192004 NCBI chr17:40,301,771...40,310,054
Ensembl chr17:40,301,808...40,310,054 		JBrowse link
G Gtpbp4 GTP binding protein 4 involved_in ISO
ISS		 (PMID:17210637)
GO_REF:0000024		 RGD
HGNC-UCL		 PMID:17210637 GO_REF:0000024 NCBI chr17:61,308,033...61,328,184
Ensembl chr17:61,308,014...61,418,009 		JBrowse link
G Hcrt hypocretin neuropeptide precursor IDA in seminiferous tubules at epithelial cycle stage V RGD PMID:16141395 RGD:1600965 NCBI chr10:85,689,979...85,691,214
Ensembl chr10:85,689,465...85,691,210 		JBrowse link
G Hmgb1 high mobility group box 1 IDA RGD PMID:18191612 RGD:2316772 NCBI chr12:11,009,236...11,015,941
Ensembl chr12:5,901,586...5,978,565
Ensembl chr16:5,901,586...5,978,565 		JBrowse link
G Inppl1 inositol polyphosphate phosphatase-like 1 IMP RGD PMID:12933696 RGD:1626126 NCBI chr 1:165,595,047...165,609,503
Ensembl chr 1:156,183,059...156,197,500 		JBrowse link
G Mapk15 mitogen-activated protein kinase 15 IMP RGD PMID:9891064 RGD:632686 NCBI chr 7:109,575,619...109,595,339
Ensembl chr 7:107,694,964...107,714,645 		JBrowse link
G Pds5a PDS5 cohesin associated factor A involved_in ISO
IEA
ISS		 (PMID:19907496)
GO_REF:0000107
GO_REF:0000024		 RGD
Ensembl
UniProt		 PMID:19907496 GO_REF:0000024 GO_REF:0000107 NCBI chr14:42,551,653...42,651,074
Ensembl chr14:42,552,647...42,648,669 		JBrowse link
G Rad17 RAD17 checkpoint clamp loader component involved_in ISO (PMID:14657349) RGD PMID:14657349 NCBI chr 2:31,764,260...31,794,542
Ensembl chr 2:31,764,261...31,794,072 		JBrowse link
G Slfn9 schlafen family member 9 involved_in ISO (PMID:29395061) RGD PMID:29395061 NCBI chr10:67,909,105...67,955,912
Ensembl chr10:67,909,106...67,925,383 		JBrowse link
G Terf1 telomeric repeat binding factor 1 involved_in ISO (PMID:11327863) RGD PMID:11327863 NCBI chr 5:3,443,103...3,472,377
Ensembl chr 5:3,443,106...3,472,340 		JBrowse link
G Tp53 tumor protein p53 involved_in
acts_upstream_of_or_within		 IEA
ISO		 GO_REF:0000107
MGI:1926340 (PMID:11884608)		 Ensembl
RGD		 PMID:11884608 GO_REF:0000107 NCBI chr10:54,798,871...54,810,300
Ensembl chr10:54,300,048...54,311,524 		JBrowse link
G Tspyl2 TSPY-like 2 involved_in ISO (PMID:11395479) RGD PMID:11395479 NCBI chr  X:24,918,851...24,924,462
Ensembl chr  X:21,439,478...21,445,089 		JBrowse link
G Wapl WAPL cohesin release factor involved_in ISO (PMID:19907496) RGD PMID:19907496 NCBI chr16:10,005,520...10,075,270
Ensembl chr16:10,004,941...10,073,510 		JBrowse link
negative regulation of DNA strand resection involved in replication fork processing term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Dynll1 dynein light chain LC8-type 1 involved_in ISS
ISO		 GO_REF:0000024
(PMID:30464262), (PMID:37696958)		 UniProt
RGD		 PMID:30464262 PMID:37696958 GO_REF:0000024 NCBI chr12:46,945,291...46,976,867
Ensembl chr12:41,312,367...41,314,741 		JBrowse link
negative regulation of DNA-templated DNA replication term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Cdt1 chromatin licensing and DNA replication factor 1 involved_in ISO (PMID:19906994) RGD PMID:19906994 NCBI chr19:50,620,713...50,625,659
Ensembl chr19:50,620,713...50,625,659 		JBrowse link
G Gmnn geminin, DNA replication inhibitor involved_in ISO (PMID:11125146), (PMID:19906994) RGD PMID:11125146 PMID:19906994 NCBI chr17:40,301,771...40,310,054
Ensembl chr17:40,301,808...40,310,054 		JBrowse link
negative regulation of double-strand break repair term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Mir221 microRNA 221 involved_in ISO (PMID:24147153) RGD PMID:24147153 NCBI chr  X:6,023,182...6,023,290
Ensembl chr  X:3,429,465...3,429,573 		JBrowse link
G Otub1 OTU deubiquitinase, ubiquitin aldehyde binding 1 involved_in ISS
ISO		 GO_REF:0000024
(PMID:20725033)		 UniProt
RGD		 PMID:20725033 GO_REF:0000024 NCBI chr 1:204,387,215...204,395,495
Ensembl chr 1:204,387,215...204,395,483 		JBrowse link
G Rnf169 ring finger protein 169 involved_in ISO (PMID:22492721), (PMID:22733822), (PMID:22742833) RGD PMID:22492721 PMID:22733822 PMID:22742833 NCBI chr 1:154,250,462...154,311,867
Ensembl chr 1:154,254,473...154,311,653 		JBrowse link
G Twist1 twist family bHLH transcription factor 1 involved_in ISO (PMID:17690110) RGD PMID:17690110 NCBI chr 6:56,402,309...56,404,303
Ensembl chr 6:50,674,678...50,677,653 		JBrowse link
negative regulation of double-strand break repair via homologous recombination term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Abl1 ABL proto-oncogene 1, non-receptor tyrosine kinase involved_in ISO (PMID:9461559) RGD PMID:9461559 NCBI chr 3:35,377,587...35,480,843
Ensembl chr 3:14,979,853...15,083,065 		JBrowse link
G C1qbp complement C1q binding protein involved_in IEA
ISO
ISS		 GO_REF:0000107
(PMID:31353207)
GO_REF:0000024		 Ensembl
RGD
UniProt		 PMID:31353207 GO_REF:0000024 GO_REF:0000107 NCBI chr10:55,699,954...55,704,605
Ensembl chr10:55,699,954...55,704,649 		JBrowse link
G Cgas cyclic GMP-AMP synthase involved_in ISO
IBA		 (PMID:30356214), (PMID:31544964)
GO_REF:0000033		 RGD
GO_Central		 PMID:30356214 PMID:31544964 GO_REF:0000033 NCBI chr 8:79,292,282...79,306,998
Ensembl chr 8:79,294,511...79,305,496 		JBrowse link
G Csnk2a1 casein kinase 2 alpha 1 involved_in ISS
ISO		 GO_REF:0000024
(PMID:28512243)		 UniProt
RGD		 PMID:28512243 GO_REF:0000024 NCBI chr 3:161,170,295...161,217,073
Ensembl chr 3:140,709,991...140,756,696 		JBrowse link
G Fancb FA complementation group B involved_in
acts_upstream_of_or_within		 IBA
ISO		 GO_REF:0000033
MGI:2156841 (PMID:25520194)		 GO_Central
RGD		 PMID:25520194 GO_REF:0000033 NCBI chr  X:29,403,771...29,420,484
Ensembl chr  X:29,403,771...29,420,192 		JBrowse link
G Fbh1 F-box DNA helicase 1 involved_in ISO (PMID:19736316)
(PMID:24108124)		 RGD PMID:19736316 PMID:24108124 NCBI chr17:66,749,506...66,787,590
Ensembl chr17:66,749,534...66,787,590 		JBrowse link
G Helb DNA helicase B involved_in ISO (PMID:26774285) RGD PMID:26774285 NCBI chr 7:55,588,510...55,615,979
Ensembl chr 7:55,588,798...55,615,585 		JBrowse link
G Kat5 lysine acetyltransferase 5 involved_in ISO
IEA		 (PMID:32832608)
GO_REF:0000107		 RGD
Ensembl		 PMID:32832608 GO_REF:0000107 NCBI chr 1:212,325,089...212,332,640
Ensembl chr 1:202,895,751...202,903,458 		JBrowse link
G Klhl15 kelch-like family member 15 involved_in ISS
ISO		 GO_REF:0000024
(PMID:27561354), (PMID:35219381)		 UniProt
RGD		 PMID:27561354 PMID:35219381 GO_REF:0000024 NCBI chr  X:58,994,726...59,050,207
Ensembl chr  X:58,995,461...59,046,069 		JBrowse link
G Kmt5a lysine methyltransferase 5A involved_in ISO (PMID:27338793) RGD PMID:27338793 NCBI chr12:32,139,353...32,167,777
Ensembl chr12:32,139,178...32,162,711 		JBrowse link
G Mad2l2 mitotic arrest deficient 2 like 2 involved_in ISO (PMID:29656893) RGD PMID:29656893 NCBI chr 5:158,563,545...158,576,698
Ensembl chr 5:158,563,567...158,576,693 		JBrowse link
G Parpbp PARP1 binding protein involved_in ISS
IBA
IEA
ISO		 GO_REF:0000024
GO_REF:0000033
GO_REF:0000002
(PMID:22153967)		 UniProt
GO_Central
InterPro
RGD		 PMID:22153967 GO_REF:0000002 GO_REF:0000024 GO_REF:0000033 NCBI chr 7:22,511,427...22,580,834
Ensembl chr 7:22,511,427...22,573,695 		JBrowse link
G Plk1 polo-like kinase 1 involved_in IEA
ISO
ISS		 GO_REF:0000107
(PMID:28512243)
GO_REF:0000024		 Ensembl
RGD
UniProt		 PMID:28512243 GO_REF:0000024 GO_REF:0000107 NCBI chr 1:186,147,658...186,157,637
Ensembl chr 1:176,716,420...176,726,400 		JBrowse link
G Polq DNA polymerase theta involved_in ISO (PMID:25642963), (PMID:28695890), (PMID:36455556)
(PMID:25642960), (PMID:28687761), (PMID:29058711)		 RGD PMID:25642960 PMID:25642963 PMID:28687761 PMID:28695890 PMID:29058711 More... NCBI chr11:77,179,190...77,281,270
Ensembl chr11:63,673,816...63,775,878 		JBrowse link
G Radx RPA1 related single stranded DNA binding protein, X-linked involved_in ISO
IEA
ISS		 (PMID:28735897)
GO_REF:0000107
GO_REF:0000024		 RGD
Ensembl
UniProt		 PMID:28735897 GO_REF:0000024 GO_REF:0000107 NCBI chr  X:103,089,284...103,176,840
Ensembl chr  X:103,089,284...103,176,838 		JBrowse link
G Recql5 RecQ like helicase 5 acts_upstream_of_or_within ISO MGI:2448558 (PMID:25520194) RGD PMID:25520194 NCBI chr10:101,126,544...101,165,739
Ensembl chr10:101,126,547...101,165,652 		JBrowse link
G Rif1 replication timing regulatory factor 1 involved_in ISO (PMID:23333306)
(PMID:23306437), (PMID:23333305)		 RGD PMID:23306437 PMID:23333305 PMID:23333306 NCBI chr 3:36,554,689...36,607,961
Ensembl chr 3:36,554,697...36,603,617 		JBrowse link
G Rmi2 RecQ mediated genome instability 2 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr10:4,829,333...4,837,264
Ensembl chr10:4,830,553...4,837,235 		JBrowse link
G Senp3 SUMO specific peptidase 3 involved_in ISO (PMID:32832608) RGD PMID:32832608 NCBI chr10:54,390,698...54,399,590
Ensembl chr10:54,390,694...54,399,593 		JBrowse link
G Shld1 shieldin complex subunit 1 involved_in ISO
IBA		 (PMID:29656893)
GO_REF:0000033		 RGD
GO_Central		 PMID:29656893 GO_REF:0000033 NCBI chr 3:119,938,695...120,011,068
Ensembl chr 3:119,938,833...120,009,550 		JBrowse link
G Shld2 shieldin complex subunit 2 involved_in ISO (PMID:29656893) RGD PMID:29656893 NCBI chr16:9,554,921...9,646,186
Ensembl chr16:9,548,660...9,639,965 		JBrowse link
G Shld3 shieldin complex subunit 3 involved_in ISO
IBA		 (PMID:29656893)
GO_REF:0000033		 RGD
GO_Central		 PMID:29656893 GO_REF:0000033 NCBI chr 2:35,297,255...35,302,071
Ensembl chr 2:35,295,859...35,302,346 		JBrowse link
G Smchd1 structural maintenance of chromosomes flexible hinge domain containing 1 involved_in ISO (PMID:25294876) RGD PMID:25294876 NCBI chr 9:111,243,445...111,387,272
Ensembl chr 9:111,247,702...111,349,665 		JBrowse link
G Tp53bp1 tumor protein p53 binding protein 1 involved_in ISO (PMID:23333306), (PMID:23345425)
(PMID:20362325), (PMID:23333305)		 RGD PMID:20362325 PMID:23333305 PMID:23333306 PMID:23345425 NCBI chr 3:128,620,320...128,724,716
Ensembl chr 3:108,169,980...108,269,822 		JBrowse link
G Ubqln4 ubiquilin 4 involved_in ISO (PMID:30612738) RGD PMID:30612738 NCBI chr 2:176,310,524...176,325,724
Ensembl chr 2:174,012,777...174,028,059 		JBrowse link
negative regulation of double-strand break repair via nonhomologous end joining term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Aunip aurora kinase A and ninein interacting protein involved_in ISS
IEA
ISO		 GO_REF:0000024
GO_REF:0000107
(PMID:29042561)		 UniProt
Ensembl
RGD		 PMID:29042561 GO_REF:0000024 GO_REF:0000107 NCBI chr 5:146,722,329...146,734,924
Ensembl chr 5:146,722,337...146,736,501 		JBrowse link
G Cyren cell cycle regulator of NHEJ involved_in ISO
IEA
ISS		 (PMID:28959974)
GO_REF:0000107
GO_REF:0000024		 RGD
Ensembl
UniProt		 PMID:28959974 GO_REF:0000024 GO_REF:0000107 NCBI chr 4:63,547,311...63,553,394
Ensembl chr 4:63,547,335...63,551,602 		JBrowse link
G Ercc6 ERCC excision repair 6, chromatin remodeling factor involved_in ISO (PMID:25820262) RGD PMID:25820262 NCBI chr16:7,771,311...7,841,895
Ensembl chr16:7,765,013...7,835,587 		JBrowse link
G Hmga2 high mobility group AT-hook 2 involved_in ISS
ISO		 GO_REF:0000024
(PMID:19549901)		 UniProt
RGD		 PMID:19549901 GO_REF:0000024 NCBI chr 7:57,762,710...57,884,555
Ensembl chr 7:55,880,112...55,994,784 		JBrowse link
G Hsf1 heat shock transcription factor 1 involved_in ISO (PMID:26359349) RGD PMID:26359349 NCBI chr 7:110,076,710...110,103,665
Ensembl chr 7:108,196,056...108,223,011 		JBrowse link
G Mre11 MRE11 homolog, double strand break repair nuclease involved_in ISS
ISO
IEA		 GO_REF:0000024
(PMID:24316220)
GO_REF:0000107		 UniProt
RGD
Ensembl		 PMID:24316220 GO_REF:0000024 GO_REF:0000107 NCBI chr 8:19,900,211...19,961,906
Ensembl chr 8:11,632,354...11,678,279 		JBrowse link
G Nudt16l1 nudix hydrolase 16 like 1 involved_in ISO (PMID:28241136) RGD PMID:28241136 NCBI chr10:10,636,174...10,638,090
Ensembl chr10:10,636,174...10,688,370 		JBrowse link
negative regulation of double-strand break repair via single-strand annealing term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ogg1 8-oxoguanine DNA glycosylase acts_upstream_of_or_within ISO (PMID:19506022) RGD PMID:19506022 NCBI chr 4:148,030,237...148,037,599
Ensembl chr 4:146,474,750...146,484,766 		JBrowse link
negative regulation of endodeoxyribonuclease activity term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Gzma granzyme A involved_in ISO (PMID:12524539) RGD PMID:12524539 NCBI chr 2:44,740,569...44,752,502
Ensembl chr 2:44,740,569...44,752,493 		JBrowse link
negative regulation of isotype switching term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Parp3 poly (ADP-ribose) polymerase family, member 3 involved_in ISO (PMID:26000965) RGD PMID:26000965 NCBI chr 8:115,989,721...115,995,822
Ensembl chr 8:107,111,012...107,116,782 		JBrowse link
negative regulation of isotype switching to IgA isotypes term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Fdcsp follicular dendritic cell secreted protein involved_in ISO MGI:6723808|MGI:7719862 (PMID:24399151) RGD PMID:24399151 NCBI chr14:20,447,761...20,453,227
Ensembl chr14:20,169,691...20,173,983 		JBrowse link
negative regulation of isotype switching to IgE isotypes term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Bcl6 BCL6, transcription repressor acts_upstream_of_or_within ISO MGI:103034|MGI:2158438 (PMID:10490661) RGD PMID:10490661 NCBI chr11:90,358,753...90,382,049
Ensembl chr11:76,854,090...76,877,389 		JBrowse link
G Foxp3 forkhead box P3 acts_upstream_of_or_within ISO MGI:3696705 (PMID:16275384) RGD PMID:16275384 NCBI chr  X:17,580,380...17,601,181
Ensembl chr  X:14,908,494...14,923,838 		JBrowse link
G Ndfip1 Nedd4 family interacting protein 1 involved_in
acts_upstream_of_or_within		 IEA
ISO		 GO_REF:0000107
MGI:3695433 (PMID:17137798)		 Ensembl
RGD		 PMID:17137798 GO_REF:0000107 NCBI chr18:30,516,931...30,567,199
Ensembl chr18:30,250,613...30,322,311 		JBrowse link
negative regulation of mitochondrial DNA replication term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Atg7 autophagy related 7 IMP RGD PMID:23800874 RGD:11557986 NCBI chr 4:149,390,000...149,597,534
Ensembl chr 4:147,718,752...147,925,593 		JBrowse link
G Lig3 DNA ligase 3 involved_in ISO (PMID:21878356) RGD PMID:21878356 NCBI chr10:67,717,808...67,741,141
Ensembl chr10:67,717,812...67,798,414 		JBrowse link
negative regulation of mitotic recombination term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ankle1 ankyrin repeat and LEM domain containing 1 involved_in ISO UniProtKB:O88700 (PMID:27010503) RGD PMID:27010503 NCBI chr16:18,076,413...18,082,356
Ensembl chr16:18,076,492...18,083,729 		JBrowse link
G Blm BLM RecQ like helicase acts_upstream_of_or_within
involved_in		 ISO MGI:1857708|MGI:2158669|MGI:2158670|MGI:3053044|MGI:3663359 (PMID:11101838), (PMID:16914751), (PMID:17210642), (PMID:9808625)
UniProtKB:A8VU90 (PMID:27010503)		 RGD PMID:9808625 PMID:11101838 PMID:16914751 PMID:17210642 PMID:27010503 NCBI chr 1:143,819,072...143,905,300
Ensembl chr 1:134,409,857...134,484,312 		JBrowse link
G Mlh1 mutL homolog 1 involved_in
acts_upstream_of_or_within		 IEA
ISO		 GO_REF:0000107
MGI:1858054 (PMID:15480418)		 Ensembl
RGD		 PMID:15480418 GO_REF:0000107 NCBI chr 8:120,074,871...120,112,109
Ensembl chr 8:111,196,468...111,233,617 		JBrowse link
negative regulation of protection from non-homologous end joining at telomere term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ercc1 ERCC excision repair 1, endonuclease non-catalytic subunit involved_in ISO (PMID:14690602) RGD PMID:14690602 NCBI chr 1:88,099,308...88,135,966
Ensembl chr 1:78,996,390...79,007,963 		JBrowse link
G Ercc4 ERCC excision repair 4, endonuclease catalytic subunit involved_in ISO (PMID:14690602) RGD PMID:14690602 NCBI chr10:2,926,085...2,958,176
Ensembl chr10:2,419,038...2,448,369
Ensembl chr10:2,419,038...2,448,369 		JBrowse link
G Xrcc1 X-ray repair cross complementing 1 involved_in ISO (PMID:14690602) RGD PMID:14690602 NCBI chr 1:89,268,721...89,296,619
Ensembl chr 1:80,141,207...80,168,701 		JBrowse link
G Xrcc4 X-ray repair cross complementing 4 involved_in ISO (PMID:14690602) RGD PMID:14690602 NCBI chr 2:20,948,464...21,197,705
Ensembl chr 2:20,951,200...21,197,808 		JBrowse link
negative regulation of t-circle formation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Rtel1 regulator of telomere elongation helicase 1 involved_in ISO
IBA		 (PMID:25620558)
(PMID:22579284), (PMID:24115439)
GO_REF:0000033		 RGD
GO_Central		 PMID:22579284 PMID:24115439 PMID:25620558 GO_REF:0000033 NCBI chr 3:168,427,247...168,465,349
Ensembl chr 3:168,419,579...168,465,348 		JBrowse link
G Terf2 telomeric repeat binding factor 2 involved_in ISO (PMID:15507207) RGD PMID:15507207 NCBI chr19:34,976,963...35,005,813
Ensembl chr19:34,977,471...35,005,819 		JBrowse link
G Xrcc5 X-ray repair cross complementing 5 involved_in ISO (PMID:19581589) RGD PMID:19581589 NCBI chr 9:73,955,216...74,044,020
Ensembl chr 9:73,955,216...74,044,018 		JBrowse link
negative regulation of telomere capping term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Atm ATM serine/threonine kinase involved_in ISO (PMID:17694070) RGD PMID:17694070 NCBI chr 8:62,724,939...62,829,040
Ensembl chr 8:53,831,093...53,932,437 		JBrowse link
G Nbn nibrin involved_in IEA
ISO		 GO_REF:0000107
(PMID:17694070)		 Ensembl
RGD		 PMID:17694070 GO_REF:0000107 NCBI chr 5:34,256,678...34,291,163
Ensembl chr 5:29,459,457...29,494,150 		JBrowse link
G Rad50 RAD50 double strand break repair protein involved_in ISO
IEA		 (PMID:17694070)
GO_REF:0000107		 RGD
Ensembl		 PMID:17694070 GO_REF:0000107 NCBI chr10:38,310,147...38,362,100
Ensembl chr10:37,808,726...37,861,396 		JBrowse link
G Smg6 SMG6 nonsense mediated mRNA decay factor involved_in ISO (PMID:12676087) RGD PMID:12676087 NCBI chr10:59,786,258...60,014,395
Ensembl chr10:59,786,258...60,014,395 		JBrowse link
G Terf2 telomeric repeat binding factor 2 involved_in ISO (PMID:24270157) RGD PMID:24270157 NCBI chr19:34,976,963...35,005,813
Ensembl chr19:34,977,471...35,005,819 		JBrowse link
negative regulation of telomere maintenance term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ercc1 ERCC excision repair 1, endonuclease non-catalytic subunit involved_in ISO (PMID:17055345) RGD PMID:17055345 NCBI chr 1:88,099,308...88,135,966
Ensembl chr 1:78,996,390...79,007,963 		JBrowse link
G Ercc4 ERCC excision repair 4, endonuclease catalytic subunit involved_in ISO (PMID:17055345) RGD PMID:17055345 NCBI chr10:2,926,085...2,958,176
Ensembl chr10:2,419,038...2,448,369
Ensembl chr10:2,419,038...2,448,369 		JBrowse link
G Src SRC proto-oncogene, non-receptor tyrosine kinase acts_upstream_of ISO (PMID:21531765) RGD PMID:21531765 NCBI chr 3:166,511,616...166,559,463
Ensembl chr 3:146,091,841...146,139,476 		JBrowse link
G Terf2 telomeric repeat binding factor 2 involved_in ISO (PMID:11971978) RGD PMID:11971978 NCBI chr19:34,976,963...35,005,813
Ensembl chr19:34,977,471...35,005,819 		JBrowse link
G Tinf2 TERF1 interacting nuclear factor 2 acts_upstream_of_or_within ISO (PMID:12676566) RGD PMID:12676566 NCBI chr15:29,170,663...29,178,015
Ensembl chr15:29,170,652...29,176,984 		JBrowse link
negative regulation of telomere maintenance in response to DNA damage term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Rtel1 regulator of telomere elongation helicase 1 involved_in ISO (PMID:22579284) RGD PMID:22579284 NCBI chr 3:168,427,247...168,465,349
Ensembl chr 3:168,419,579...168,465,348 		JBrowse link
negative regulation of telomere maintenance via recombination term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Terf2 telomeric repeat binding factor 2 involved_in ISO
IBA		 (PMID:15507207)
(PMID:24120135)
GO_REF:0000033		 RGD
GO_Central		 PMID:15507207 PMID:24120135 GO_REF:0000033 NCBI chr19:34,976,963...35,005,813
Ensembl chr19:34,977,471...35,005,819 		JBrowse link
negative regulation of telomere maintenance via telomerase term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Acd ACD, shelterin complex subunit and telomerase recruitment factor involved_in IEA
ISO
IBA		 GO_REF:0000107
UniProtKB:Q9NUX5 (PMID:15181449), (PMID:15380063), (PMID:25172512)
GO_REF:0000033		 Ensembl
RGD
GO_Central		 PMID:15181449 PMID:15380063 PMID:25172512 GO_REF:0000033 GO_REF:0000107 NCBI chr19:33,586,739...33,589,481
Ensembl chr19:33,586,745...33,589,461 		JBrowse link
G Ctc1 CST telomere replication complex component 1 involved_in ISO (PMID:22763445) RGD PMID:22763445 NCBI chr10:53,714,614...53,735,298
Ensembl chr10:53,714,644...53,735,298 		JBrowse link
G Dcp2 decapping mRNA 2 involved_in ISO (PMID:26950371) RGD PMID:26950371 NCBI chr18:36,750,732...36,787,067
Ensembl chr18:36,750,732...36,788,557 		JBrowse link
G Exosc10 exosome component 10 involved_in ISO (PMID:26950371) RGD PMID:26950371 NCBI chr 5:158,995,313...159,018,940
Ensembl chr 5:158,995,313...159,018,940 		JBrowse link
G Gnl3l G protein nucleolar 3 like involved_in ISO (PMID:18082603) RGD PMID:18082603 NCBI chr  X:19,961,277...19,994,454
Ensembl chr  X:19,958,603...19,994,508 		JBrowse link
G Hnrnpa1 heterogeneous nuclear ribonucleoprotein A1 involved_in ISO
IEA		 (PMID:23935072)
GO_REF:0000107		 RGD
Ensembl		 PMID:23935072 GO_REF:0000107 NCBI chr 7:134,375,318...134,381,610
Ensembl chr 7:134,375,150...134,381,609 		JBrowse link
G Hnrnpc heterogeneous nuclear ribonucleoprotein C involved_in ISO (PMID:18082603) RGD PMID:18082603 NCBI chr15:27,253,098...27,282,779
Ensembl chr15:24,779,450...24,809,183 		JBrowse link
G Hnrnpu heterogeneous nuclear ribonucleoprotein U involved_in IEA
ISO		 GO_REF:0000107
(PMID:18082603)		 Ensembl
RGD		 PMID:18082603 GO_REF:0000107 NCBI chr13:90,069,058...90,086,905
Ensembl chr13:90,074,181...90,086,588 		JBrowse link
G Nat10 N-acetyltransferase 10 involved_in ISO (PMID:18082603) RGD PMID:18082603 NCBI chr 3:90,111,643...90,149,891
Ensembl chr 3:90,111,645...90,149,927 		JBrowse link
G Pif1 PIF1 5'-to-3' DNA helicase involved_in ISO (PMID:16522649), (PMID:23657261) RGD PMID:16522649 PMID:23657261 NCBI chr 8:66,110,641...66,120,202
Ensembl chr 8:66,111,072...66,120,200 		JBrowse link
G Pinx1 PIN2/TERF1 interacting, telomerase inhibitor 1 involved_in ISO
IEA		 (PMID:11701125), (PMID:21119197)
GO_REF:0000107		 RGD
Ensembl		 PMID:11701125 PMID:21119197 GO_REF:0000107 NCBI chr15:38,097,896...38,157,143
Ensembl chr15:38,097,886...38,157,140 		JBrowse link
G Pml PML nuclear body scaffold involved_in ISO (PMID:19567472) RGD PMID:19567472 NCBI chr 8:67,523,164...67,557,801
Ensembl chr 8:58,628,837...58,658,971 		JBrowse link
G Pot1 protection of telomeres 1 involved_in ISO UniProtKB:Q96AP0 (PMID:15181449), (PMID:15632080) RGD PMID:15181449 PMID:15632080 NCBI chr 4:55,170,821...55,228,588
Ensembl chr 4:54,205,332...54,263,042 		JBrowse link
G Stn1 STN1 subunit of CST complex involved_in ISO
IEA		 (PMID:22763445)
GO_REF:0000107		 RGD
Ensembl		 PMID:22763445 GO_REF:0000107 NCBI chr 1:256,336,916...256,371,143
Ensembl chr 1:246,395,613...246,429,531 		JBrowse link
G Ten1 TEN1 subunit of CST complex involved_in ISO
IBA		 (PMID:22763445)
GO_REF:0000033		 RGD
GO_Central		 PMID:22763445 GO_REF:0000033 NCBI chr10:101,431,328...101,455,105
Ensembl chr10:101,431,328...101,453,052 		JBrowse link
G Tent4b terminal nucleotidyltransferase 4B involved_in ISO (PMID:26950371) RGD PMID:26950371 NCBI chr19:18,807,616...18,868,969
Ensembl chr19:18,807,525...18,869,537 		JBrowse link
G Terf1 telomeric repeat binding factor 1 involved_in ISO UniProtKB:O14746 (PMID:11971978) RGD PMID:11971978 NCBI chr 5:3,443,103...3,472,377
Ensembl chr 5:3,443,106...3,472,340 		JBrowse link
G Terf2 telomeric repeat binding factor 2 involved_in ISO (PMID:17055345) RGD PMID:17055345 NCBI chr19:34,976,963...35,005,813
Ensembl chr19:34,977,471...35,005,819 		JBrowse link
G Tinf2 TERF1 interacting nuclear factor 2 involved_in ISO (PMID:10581025), (PMID:15133513) RGD PMID:10581025 PMID:15133513 NCBI chr15:29,170,663...29,178,015
Ensembl chr15:29,170,652...29,176,984 		JBrowse link
G Tp53 tumor protein p53 involved_in IEA
ISO		 GO_REF:0000107
(PMID:10597287)		 Ensembl
RGD		 PMID:10597287 GO_REF:0000107 NCBI chr10:54,798,871...54,810,300
Ensembl chr10:54,300,048...54,311,524 		JBrowse link
negative regulation of telomere maintenance via telomere lengthening term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ercc4 ERCC excision repair 4, endonuclease catalytic subunit involved_in ISO (PMID:18812185) RGD PMID:18812185 NCBI chr10:2,926,085...2,958,176
Ensembl chr10:2,419,038...2,448,369
Ensembl chr10:2,419,038...2,448,369 		JBrowse link
G Mcrs1 microspherule protein 1 involved_in ISO (PMID:15044100) RGD PMID:15044100 NCBI chr 7:130,383,853...130,392,667
Ensembl chr 7:130,383,853...130,392,685 		JBrowse link
G Parp1 poly (ADP-ribose) polymerase 1 involved_in ISO (PMID:26586427) RGD PMID:26586427 NCBI chr13:94,839,484...94,871,295
Ensembl chr13:92,307,586...92,339,404 		JBrowse link
G Slx1b SLX1 homolog B, structure-specific endonuclease subunit involved_in ISO (PMID:24012755) RGD PMID:24012755 NCBI chr 1:181,286,190...181,291,739
Ensembl chr 1:181,283,921...181,291,775 		JBrowse link
G Slx4 SLX4 structure-specific endonuclease subunit involved_in ISO (PMID:24012755) RGD PMID:24012755 NCBI chr10:11,526,623...11,549,313
Ensembl chr10:11,528,424...11,549,295 		JBrowse link
G Terf2 telomeric repeat binding factor 2 involved_in ISO (PMID:24012755) RGD PMID:24012755 NCBI chr19:34,976,963...35,005,813
Ensembl chr19:34,977,471...35,005,819 		JBrowse link
G Tnks tankyrase involved_in ISO (PMID:25939383) RGD PMID:25939383 NCBI chr16:57,223,174...57,370,740
Ensembl chr16:57,225,094...57,366,260 		JBrowse link
G Tnks2 tankyrase 2 involved_in ISO (PMID:25939383) RGD PMID:25939383 NCBI chr 1:234,567,888...234,621,079
Ensembl chr 1:234,567,858...234,621,079 		JBrowse link
negative regulation of telomeric D-loop disassembly term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Terf1 telomeric repeat binding factor 1 involved_in ISO (PMID:15200954) RGD PMID:15200954 NCBI chr 5:3,443,103...3,472,377
Ensembl chr 5:3,443,106...3,472,340 		JBrowse link
G Terf2 telomeric repeat binding factor 2 involved_in ISO
IBA		 (PMID:15200954)
GO_REF:0000033		 RGD
GO_Central		 PMID:15200954 GO_REF:0000033 NCBI chr19:34,976,963...35,005,813
Ensembl chr19:34,977,471...35,005,819 		JBrowse link
non-replicative DNA transposition term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Pgbd5 piggyBac transposable element derived 5 involved_in ISO
IBA		 (PMID:26406119)
GO_REF:0000033		 RGD
GO_Central		 PMID:26406119 GO_REF:0000033 NCBI chr19:52,336,751...52,401,906
Ensembl chr19:52,336,751...52,402,397 		JBrowse link
nuclear DNA replication term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Atad5 ATPase family, AAA domain containing 5 involved_in ISO MGI:4127920 (PMID:25404367) RGD PMID:25404367 NCBI chr10:65,568,569...65,616,379
Ensembl chr10:65,070,689...65,117,845 		JBrowse link
G Donson DNA replication fork stabilization factor DONSON involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr11:30,919,834...30,933,150
Ensembl chr11:30,923,239...30,932,889 		JBrowse link
G Zfp830 zinc finger protein 830 involved_in
acts_upstream_of_or_within		 IBA
ISO		 GO_REF:0000033
MGI:4950703 (PMID:21191184)		 GO_Central
RGD		 PMID:21191184 GO_REF:0000033 NCBI chr10:67,701,340...67,702,804
Ensembl chr10:67,701,073...67,704,523 		JBrowse link
nucleotide-excision repair term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Brca2 BRCA2, DNA repair associated involved_in ISO
IEA		 (PMID:16845393)
GO_REF:0000107		 RGD
Ensembl		 PMID:16845393 GO_REF:0000107 NCBI chr12:4,895,092...4,939,340
Ensembl chr12:59,819...100,567 		JBrowse link
G Brip1 BRCA1 interacting DNA helicase 1 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr10:71,402,035...71,528,083
Ensembl chr10:70,907,371...71,030,324 		JBrowse link
G Cetn2 centrin 2 involved_in ISO
IBA		 (PMID:15964821)
GO_REF:0000033		 RGD
GO_Central		 PMID:15964821 GO_REF:0000033 NCBI chr  X:150,769,944...150,774,833
Ensembl chr  X:150,769,953...150,774,919 		JBrowse link
G Commd1 copper metabolism domain containing 1 involved_in ISO (PMID:23144634) RGD PMID:23144634 NCBI chr14:96,880,463...96,984,494
Ensembl chr14:96,880,463...96,984,501 		JBrowse link
G Dclre1a DNA cross-link repair 1A acts_upstream_of_or_within ISO MGI:2180947 (PMID:10848582) RGD PMID:10848582 NCBI chr 1:255,569,911...255,589,815
Ensembl chr 1:255,569,919...255,589,678 		JBrowse link
G Ddb2 damage specific DNA binding protein 2 involved_in ISO (PMID:19109893) RGD PMID:19109893 NCBI chr 3:97,640,923...97,667,617
Ensembl chr 3:77,185,109...77,207,631 		JBrowse link
G Ercc1 ERCC excision repair 1, endonuclease non-catalytic subunit involved_in
acts_upstream_of_or_within		 ISO (PMID:7657672)
MGI:2183944 (PMID:8275084)
(PMID:3290851)
(PMID:22547097)		 RGD PMID:3290851 PMID:7657672 PMID:8275084 PMID:22547097 NCBI chr 1:88,099,308...88,135,966
Ensembl chr 1:78,996,390...79,007,963 		JBrowse link
G Ercc2 ERCC excision repair 2, TFIIH core complex helicase subunit involved_in
acts_upstream_of_or_within		 ISO (PMID:8692841)
MGI:2183949 (PMID:11950998), (PMID:9651581)		 RGD PMID:8692841 PMID:9651581 PMID:11950998 NCBI chr 1:88,161,342...88,175,102
Ensembl chr 1:79,033,326...79,047,102 		JBrowse link
G Ercc3 ERCC excision repair 3, TFIIH core complex helicase subunit involved_in ISO
IEA		 (PMID:17466626), (PMID:17509950), (PMID:8692841)
GO_REF:0000002		 RGD
InterPro		 PMID:8692841 PMID:17466626 PMID:17509950 GO_REF:0000002 NCBI chr18:24,157,831...24,188,543
Ensembl chr18:23,883,580...23,914,329 		JBrowse link
G Ercc4 ERCC excision repair 4, endonuclease catalytic subunit acts_upstream_of_or_within
involved_in		 ISO (PMID:10644440)
(PMID:10413517), (PMID:11790111), (PMID:14728600), (PMID:22547097), (PMID:32034146), (PMID:8797827)		 RGD PMID:8797827 PMID:10413517 PMID:10644440 PMID:11790111 PMID:14728600 More... NCBI chr10:2,926,085...2,958,176
Ensembl chr10:2,419,038...2,448,369
Ensembl chr10:2,419,038...2,448,369 		JBrowse link
G Ercc5 ERCC excision repair 5, endonuclease involved_in
acts_upstream_of_or_within		 ISO (PMID:11259578), (PMID:32522879), (PMID:32821917), (PMID:7657672), (PMID:8090225)
MGI:2182793 (PMID:10022922)		 RGD PMID:7657672 PMID:8090225 PMID:10022922 PMID:11259578 PMID:32522879 More... NCBI chr 9:53,801,471...53,846,611
Ensembl chr 9:46,309,389...46,354,472 		JBrowse link
G Fan1 FANCD2 and FANCI associated nuclease 1 involved_in ISO (PMID:20603015), (PMID:20603016), (PMID:25430771) RGD PMID:20603015 PMID:20603016 PMID:25430771 NCBI chr 1:127,327,098...127,356,807
Ensembl chr 1:117,917,099...117,944,977 		JBrowse link
G Fancc FA complementation group C involved_in
acts_upstream_of_or_within		 IEA
ISO
IBA		 GO_REF:0000107
MGI:1858041 (PMID:8704201)
GO_REF:0000033		 Ensembl
RGD
GO_Central		 PMID:8704201 GO_REF:0000033 GO_REF:0000107 NCBI chr17:1,686,374...1,818,672
Ensembl chr17:1,681,324...1,829,376 		JBrowse link
G Gtf2h1 general transcription factor IIH subunit 1 involved_in IEA GO_REF:0000002 InterPro GO_REF:0000002 NCBI chr 1:97,321,417...97,349,455
Ensembl chr 1:97,321,394...97,349,455 		JBrowse link
G Gtf2h2 general transcription factor IIH subunit 2 involved_in IEA
IBA		 GO_REF:0000104
GO_REF:0000033		 UniProt
GO_Central		 GO_REF:0000033 GO_REF:0000104 NCBI chr 2:31,623,752...31,652,697
Ensembl chr 2:31,624,678...31,652,592 		JBrowse link
G Gtf2h3 general transcription factor IIH subunit 3 involved_in IEA
IBA		 GO_REF:0000104
GO_REF:0000033		 UniProt
GO_Central		 GO_REF:0000033 GO_REF:0000104 NCBI chr12:32,009,010...32,025,484
Ensembl chr12:32,009,014...32,025,497 		JBrowse link
G Gtf2h5 general transcription factor IIH subunit 5 acts_upstream_of_or_within ISO (PMID:23637614)
MGI:5514340 (PMID:23637614)		 RGD PMID:23637614 NCBI chr 1:46,656,804...46,663,512
Ensembl chr 1:46,656,859...46,664,939 		JBrowse link
G Hus1 HUS1 checkpoint clamp component involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr14:83,688,702...83,703,466
Ensembl chr14:83,688,708...83,703,442 		JBrowse link
G Kat5 lysine acetyltransferase 5 involved_in ISS
IEA
ISO		 GO_REF:0000024
GO_REF:0000107
(PMID:32034146)		 UniProt
Ensembl
RGD		 PMID:32034146 GO_REF:0000024 GO_REF:0000107 NCBI chr 1:212,325,089...212,332,640
Ensembl chr 1:202,895,751...202,903,458 		JBrowse link
G Mnat1 MNAT1 component of CDK activating kinase involved_in IEA GO_REF:0000002 InterPro GO_REF:0000002 NCBI chr 6:91,814,703...91,971,945
Ensembl chr 6:91,814,749...91,970,744 		JBrowse link
G Nthl1 nth-like DNA glycosylase 1 involved_in ISO
IBA		 (PMID:8990169)
(PMID:9743625)
GO_REF:0000033		 RGD
GO_Central		 PMID:8990169 PMID:9743625 GO_REF:0000033 NCBI chr10:13,655,791...13,661,958
Ensembl chr10:13,655,785...13,661,957 		JBrowse link
G Ogg1 8-oxoguanine DNA glycosylase acts_upstream_of_or_within ISO (PMID:19506022) RGD PMID:19506022 NCBI chr 4:148,030,237...148,037,599
Ensembl chr 4:146,474,750...146,484,766 		JBrowse link
G Pola1 DNA polymerase alpha 1, catalytic subunit NOT|involved_in ISO (PMID:1508673) RGD PMID:1508673 NCBI chr  X:58,034,617...58,348,612
Ensembl chr  X:58,034,619...58,348,536 		JBrowse link
G Poll DNA polymerase lambda involved_in ISO (PMID:10982892) RGD PMID:10982892 NCBI chr 1:244,400,202...244,408,762
Ensembl chr 1:244,400,204...244,408,662 		JBrowse link
G Rad23a RAD23 homolog A, nucleotide excision repair protein involved_in ISO (PMID:9372924) RGD PMID:9372924 NCBI chr19:23,313,563...23,320,702
Ensembl chr19:23,314,797...23,320,695 		JBrowse link
G Rad23b RAD23 homolog B, nucleotide excision repair protein involved_in ISO
IEA		 (PMID:19941824), (PMID:8168482), (PMID:9734359)
GO_REF:0000104		 RGD
UniProt		 PMID:8168482 PMID:9734359 PMID:19941824 GO_REF:0000104 NCBI chr 5:70,090,232...70,128,340
Ensembl chr 5:70,090,232...70,128,319 		JBrowse link
G Rpa1 replication protein A1 involved_in ISO
IBA		 (PMID:9430682)
GO_REF:0000033		 RGD
GO_Central		 PMID:9430682 GO_REF:0000033 NCBI chr10:60,148,869...60,199,970
Ensembl chr10:60,148,793...60,199,949 		JBrowse link
G Rpa2 replication protein A2 involved_in ISO
IBA
ISS		 (PMID:9430682)
GO_REF:0000033
GO_REF:0000024		 RGD
GO_Central
UniProt		 PMID:9430682 GO_REF:0000024 GO_REF:0000033 NCBI chr 5:144,976,789...144,989,445
Ensembl chr 5:144,976,748...144,987,350 		JBrowse link
G Rpa3 replication protein A3 involved_in ISO
IBA		 (PMID:9430682)
GO_REF:0000033		 RGD
GO_Central		 PMID:9430682 GO_REF:0000033 NCBI chr 4:36,304,649...36,307,755
Ensembl chr 4:36,304,651...36,307,709 		JBrowse link
G Rpa3l1 replication protein A3 like 1 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr12:45,908,653...45,909,063
Ensembl chr12:45,908,683...45,909,048 		JBrowse link
G Slx4 SLX4 structure-specific endonuclease subunit involved_in ISO (PMID:19596236) RGD PMID:19596236 NCBI chr10:11,526,623...11,549,313
Ensembl chr10:11,528,424...11,549,295 		JBrowse link
G Tp53 tumor protein p53 involved_in ISO
IEA
ISS		 (PMID:7663514)
GO_REF:0000107
GO_REF:0000024		 RGD
Ensembl
UniProt		 PMID:7663514 GO_REF:0000024 GO_REF:0000107 NCBI chr10:54,798,871...54,810,300
Ensembl chr10:54,300,048...54,311,524 		JBrowse link
G Xpa XPA, DNA damage recognition and repair factor involved_in
acts_upstream_of_or_within		 ISO (PMID:21148310)
MGI:1857939 (PMID:11950998), (PMID:12509265)		 RGD PMID:11950998 PMID:12509265 PMID:21148310 NCBI chr 5:65,227,281...65,275,784
Ensembl chr 5:60,431,673...60,475,726 		JBrowse link
G Xpc XPC complex subunit, DNA damage recognition and repair factor involved_in
acts_upstream_of_or_within		 ISO
IBA		 (PMID:11259578), (PMID:19941824), (PMID:8168482), (PMID:9734359)
(PMID:22431748)
MGI:1859840|MGI:1931883 (PMID:12815074), (PMID:17049932), (PMID:19615386), (PMID:9067411)
GO_REF:0000033		 RGD
GO_Central		 PMID:8168482 PMID:9067411 PMID:9734359 PMID:11259578 PMID:12815074 More... GO_REF:0000033 NCBI chr 4:125,550,833...125,578,084
Ensembl chr 4:123,993,666...124,021,010 		JBrowse link
nucleotide-excision repair involved in interstrand cross-link repair term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ercc4 ERCC excision repair 4, endonuclease catalytic subunit involved_in ISO
IBA		 (PMID:32034146)
GO_REF:0000033		 RGD
GO_Central		 PMID:32034146 GO_REF:0000033 NCBI chr10:2,926,085...2,958,176
Ensembl chr10:2,419,038...2,448,369
Ensembl chr10:2,419,038...2,448,369 		JBrowse link
G Ercc4l1 excision repair cross-complementing rodent repair deficiency, complementation group 4-like 1 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr10:954,927...983,651
Ensembl chr10:954,977...983,174 		JBrowse link
G Xpa XPA, DNA damage recognition and repair factor involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr 5:65,227,281...65,275,784
Ensembl chr 5:60,431,673...60,475,726 		JBrowse link
nucleotide-excision repair, DNA damage recognition term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Xpa XPA, DNA damage recognition and repair factor involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr 5:65,227,281...65,275,784
Ensembl chr 5:60,431,673...60,475,726 		JBrowse link
nucleotide-excision repair, DNA gap filling term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Lig4 DNA ligase 4 involved_in ISO
IBA		 (PMID:12517771), (PMID:17290226)
GO_REF:0000033		 RGD
GO_Central		 PMID:12517771 PMID:17290226 GO_REF:0000033 NCBI chr16:79,518,393...79,526,956
Ensembl chr16:79,518,312...79,527,040 		JBrowse link
G Polb DNA polymerase beta NOT|involved_in ISO (PMID:20227374) RGD PMID:20227374 NCBI chr16:69,379,438...69,402,710
Ensembl chr16:69,379,400...69,404,812 		JBrowse link
G Pold1 DNA polymerase delta 1, catalytic subunit involved_in ISO
IBA
IEA		 (PMID:20227374)
GO_REF:0000033
GO_REF:0000107		 RGD
GO_Central
Ensembl		 PMID:20227374 GO_REF:0000033 GO_REF:0000107 NCBI chr 1:104,161,984...104,178,074
Ensembl chr 1:95,025,499...95,036,465 		JBrowse link
G Pold3 DNA polymerase delta 3, accessory subunit involved_in ISO
IBA		 (PMID:20227374)
GO_REF:0000033		 RGD
GO_Central		 PMID:20227374 GO_REF:0000033 NCBI chr 1:154,417,893...154,456,687
Ensembl chr 1:154,418,084...154,456,665 		JBrowse link
G Pole DNA polymerase epsilon, catalytic subunit involved_in ISO
IBA		 (PMID:20227374)
GO_REF:0000033		 RGD
GO_Central		 PMID:20227374 GO_REF:0000033 NCBI chr12:52,005,155...52,053,761
Ensembl chr12:46,345,420...46,393,939 		JBrowse link
G Polk DNA polymerase kappa involved_in ISO (PMID:20227374) RGD PMID:20227374 NCBI chr 2:27,822,228...27,882,331
Ensembl chr 2:27,822,679...27,882,313 		JBrowse link
nucleotide-excision repair, preincision complex assembly term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Gtf2h5 general transcription factor IIH subunit 5 involved_in
acts_upstream_of_or_within		 IBA
ISO		 GO_REF:0000033
MGI:5514340 (PMID:23637614)		 GO_Central
RGD		 PMID:23637614 GO_REF:0000033 NCBI chr 1:46,656,804...46,663,512
Ensembl chr 1:46,656,859...46,664,939 		JBrowse link
G LOC120103497 general transcription factor IIH subunit 5-like involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr 6:27,109,209...27,114,478
Ensembl chr 6:27,111,331...27,111,546 		JBrowse link
Okazaki fragment processing involved in mitotic DNA replication term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Lig1 DNA ligase 1 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr 1:74,165,688...74,204,400
Ensembl chr 1:74,165,842...74,204,413 		JBrowse link
photoreactive repair term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Cry2 cryptochrome circadian regulator 2 NOT|involved_in ISO (PMID:12627958) RGD PMID:12627958 NCBI chr 3:78,374,995...78,405,001
Ensembl chr 3:78,374,995...78,404,965 		JBrowse link
positive regulation of apoptotic DNA fragmentation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Bax BCL2 associated X, apoptosis regulator involved_in ISO (PMID:11350920) RGD PMID:11350920 NCBI chr 1:105,076,472...105,081,906
Ensembl chr 1:95,938,808...95,945,368 		JBrowse link
G Endog endonuclease G IMP RGD PMID:16407272 RGD:9685355 NCBI chr 3:13,449,113...13,451,715
Ensembl chr 3:13,449,086...13,451,932 		JBrowse link
G Gata5 GATA binding protein 5 IMP RGD PMID:25726415 RGD:155260369 NCBI chr 3:167,418,563...167,426,751
Ensembl chr 3:167,418,565...167,426,751 		JBrowse link
G Hsf1 heat shock transcription factor 1 IMP RGD PMID:21192280 RGD:10403035 NCBI chr 7:110,076,710...110,103,665
Ensembl chr 7:108,196,056...108,223,011 		JBrowse link
G Igfbp3 insulin-like growth factor binding protein 3 IMP RGD PMID:15125883 RGD:10402776 NCBI chr14:86,270,208...86,277,944
Ensembl chr14:82,056,347...82,064,083 		JBrowse link
G Il6 interleukin 6 involved_in ISO (PMID:28433754) RGD PMID:28433754 NCBI chr 4:5,889,999...5,894,575
Ensembl chr 4:5,213,394...5,219,178 		JBrowse link
positive regulation of base-excision repair term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Fam168a family with sequence similarity 168, member A involved_in ISO
IBA		 (PMID:25260657)
GO_REF:0000033		 RGD
GO_Central		 PMID:25260657 GO_REF:0000033 NCBI chr 1:155,057,352...155,203,439
Ensembl chr 1:155,057,352...155,201,220 		JBrowse link
G Rps3 ribosomal protein S3 involved_in ISO (PMID:18973764) RGD PMID:18973764 NCBI chr 1:153,778,363...153,783,663
Ensembl chr 1:153,777,472...153,783,680 		JBrowse link
positive regulation of deoxyribonuclease activity term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Pcna proliferating cell nuclear antigen involved_in ISS
ISO		 GO_REF:0000024
(PMID:19443450)		 UniProt
RGD		 PMID:19443450 GO_REF:0000024 NCBI chr 3:119,499,039...119,502,911
Ensembl chr 3:119,498,810...119,502,995 		JBrowse link
positive regulation of DNA biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Arrb2 arrestin, beta 2 IMP RGD PMID:19254952 RGD:5509898 NCBI chr10:55,645,539...55,653,485
Ensembl chr10:55,146,818...55,154,850 		JBrowse link
G C3ar1 complement C3a receptor 1 IMP RGD PMID:23713944 RGD:7411623 NCBI chr 4:157,747,419...157,756,609
Ensembl chr 4:156,075,389...156,084,701 		JBrowse link
G Camk2d calcium/calmodulin-dependent protein kinase II delta IMP RGD PMID:17267544 RGD:2303063 NCBI chr 2:217,698,324...217,961,898
Ensembl chr 2:215,024,004...215,286,178 		JBrowse link
G Ccna2 cyclin A2 IMP RGD PMID:18667424 RGD:10054494 NCBI chr 2:121,355,363...121,361,762
Ensembl chr 2:119,426,089...119,433,577 		JBrowse link
G Crhr2 corticotropin releasing hormone receptor 2 IMP RGD PMID:16005543 RGD:5131269 NCBI chr 4:84,222,897...84,265,924
Ensembl chr 4:84,224,002...84,265,904 		JBrowse link
G Cyp1b1 cytochrome P450, family 1, subfamily b, polypeptide 1 IMP RGD PMID:20439821 RGD:7829726 NCBI chr 6:21,093,927...21,103,091
Ensembl chr 6:15,342,344...15,350,917 		JBrowse link
G Ddx39b DExD-box helicase 39B IMP RGD PMID:22446327 RGD:10401140 NCBI chr20:3,577,200...3,589,651
Ensembl chr20:3,572,056...3,584,996 		JBrowse link
G Egf epidermal growth factor IDA RGD PMID:3093142 RGD:10395243 NCBI chr 2:220,893,660...220,976,331
Ensembl chr 2:218,219,415...218,302,064 		JBrowse link
G Fgf2 fibroblast growth factor 2 involved_in ISO UniProtKB:Q9H3U7 (PMID:16774925) RGD PMID:16774925 NCBI chr 2:122,164,454...122,218,796
Ensembl chr 2:120,236,328...120,291,221 		JBrowse link
G Fgfr4 fibroblast growth factor receptor 4 involved_in ISO
ISS
IEA		 (PMID:21653700)
GO_REF:0000024
GO_REF:0000107		 RGD
UniProt
Ensembl		 PMID:21653700 GO_REF:0000024 GO_REF:0000107 NCBI chr17:9,461,541...9,476,268
Ensembl chr17:9,461,547...9,476,242 		JBrowse link
G Gfer growth factor, augmenter of liver regeneration IDA RGD PMID:16937468 RGD:9685728 NCBI chr10:13,718,489...13,721,782
Ensembl chr10:13,718,489...13,720,869 		JBrowse link
G Gsk3b glycogen synthase kinase 3 beta IMP RGD PMID:12721208 RGD:10045365 NCBI chr11:76,004,502...76,154,665
Ensembl chr11:62,504,316...62,648,646 		JBrowse link
G Hgf hepatocyte growth factor involved_in ISO
IEA		 (PMID:2531289)
GO_REF:0000107		 RGD
Ensembl		 PMID:2531289 GO_REF:0000107 NCBI chr 4:19,628,902...19,700,467
Ensembl chr 4:18,677,101...18,745,409 		JBrowse link
G Htr2a 5-hydroxytryptamine receptor 2A IMP RGD PMID:18358471 RGD:401938603 NCBI chr15:56,360,647...56,428,703
Ensembl chr15:49,950,804...50,020,928 		JBrowse link
G Nfatc1 nuclear factor of activated T-cells 1 IMP RGD PMID:18667424 RGD:10054494 NCBI chr18:76,321,386...76,430,997
Ensembl chr18:74,046,904...74,156,028 		JBrowse link
G Nox4 NADPH oxidase 4 involved_in IEA
ISO		 GO_REF:0000107
(PMID:17942966)		 Ensembl
RGD		 PMID:17942966 GO_REF:0000107 NCBI chr 1:150,313,736...150,491,480
Ensembl chr 1:140,901,097...141,077,406 		JBrowse link
G Pak3 p21 (RAC1) activated kinase 3 IMP RGD PMID:12890786 RGD:7775030 NCBI chr  X:111,912,967...112,171,037
Ensembl chr  X:107,260,898...107,368,314 		JBrowse link
G Pdgfb platelet derived growth factor subunit B involved_in IEA
ISO
ISS		 GO_REF:0000107
(PMID:10644978), (PMID:10734101), (PMID:11788434), (PMID:12070119), (PMID:17942966), (PMID:19019919)
GO_REF:0000024		 Ensembl
RGD
UniProt		 PMID:10644978 PMID:10734101 PMID:11788434 PMID:12070119 PMID:17942966 More... GO_REF:0000024 GO_REF:0000107 NCBI chr 7:113,419,882...113,438,343
Ensembl chr 7:111,540,345...111,557,984 		JBrowse link
G Pdgfrb platelet derived growth factor receptor beta involved_in ISS
ISO		 GO_REF:0000024
(PMID:19019919)		 UniProt
RGD		 PMID:19019919 GO_REF:0000024 NCBI chr18:56,770,348...56,809,228
Ensembl chr18:54,499,964...54,538,843 		JBrowse link
G Prkd2 protein kinase D2 involved_in ISS
ISO		 GO_REF:0000024
(PMID:17226786)		 UniProt
RGD		 PMID:17226786 GO_REF:0000024 NCBI chr 1:77,513,625...77,542,386
Ensembl chr 1:77,513,986...77,542,376 		JBrowse link
G Ptk2b protein tyrosine kinase 2 beta IMP RGD PMID:21451101 RGD:10041071 NCBI chr15:44,536,275...44,656,754
Ensembl chr15:40,360,723...40,481,282 		JBrowse link
G Rgcc regulator of cell cycle involved_in IDA PMID:9756947 BHF-UCL PMID:9756947 RGD:633887 NCBI chr15:54,662,483...54,675,320
Ensembl chr15:54,662,483...54,681,141 		JBrowse link
G Smoc2 SPARC related modular calcium binding 2 involved_in ISO UniProtKB:P09038|UniProtKB:P15692-4 (PMID:16774925) RGD PMID:16774925 NCBI chr 1:55,262,472...55,391,804
Ensembl chr 1:55,262,530...55,391,693 		JBrowse link
G Tnf tumor necrosis factor IDA RGD PMID:9395232 RGD:14696805 NCBI chr20:3,626,685...3,629,303
Ensembl chr20:3,622,011...3,624,629 		JBrowse link
G Vegfa vascular endothelial growth factor A involved_in ISO UniProtKB:Q9H3U7 (PMID:16774925) RGD PMID:16774925 NCBI chr 9:22,452,854...22,468,194
Ensembl chr 9:14,955,300...14,970,641 		JBrowse link
positive regulation of DNA catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Atm ATM serine/threonine kinase IMP RGD PMID:27895165 RGD:12879393 NCBI chr 8:62,724,939...62,829,040
Ensembl chr 8:53,831,093...53,932,437 		JBrowse link
positive regulation of DNA endoreduplication term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G E2f7 E2F transcription factor 7 involved_in IEA
ISO
ISS		 GO_REF:0000107
(PMID:23064266)
GO_REF:0000024		 Ensembl
RGD
UniProt		 PMID:23064266 GO_REF:0000024 GO_REF:0000107 NCBI chr 7:46,150,533...46,192,739
Ensembl chr 7:46,151,293...46,192,734 		JBrowse link
G E2f8 E2F transcription factor 8 involved_in IEA
ISO
ISS		 GO_REF:0000107
(PMID:23064264), (PMID:23064266)
GO_REF:0000024		 Ensembl
RGD
UniProt		 PMID:23064264 PMID:23064266 GO_REF:0000024 GO_REF:0000107 NCBI chr 1:98,565,717...98,584,265
Ensembl chr 1:98,565,717...98,584,098 		JBrowse link
positive regulation of DNA metabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Anxa3 annexin A3 IMP RGD PMID:15744063 RGD:2316072 NCBI chr14:13,031,675...13,085,678
Ensembl chr14:12,719,795...12,781,617 		JBrowse link
G Hmgb2 high mobility group box 2 IMP RGD PMID:8432381 RGD:2316096 NCBI chr16:37,721,374...37,723,950
Ensembl chr16:32,710,658...32,713,140
Ensembl chr 1:32,710,658...32,713,140 		JBrowse link
G Igf1r insulin-like growth factor 1 receptor IMP RGD PMID:19507001 RGD:2311507 NCBI chr 1:130,959,787...131,248,664
Ensembl chr 1:121,550,743...121,831,777 		JBrowse link
G Npm1 nucleophosmin 1 IDA RGD PMID:11481036 RGD:1600909 NCBI chr10:17,741,512...17,751,626
Ensembl chr10:17,739,941...17,751,645
Ensembl chr  X:17,739,941...17,751,645 		JBrowse link
G Npm2 nucleophosmin/nucleoplasmin 2 IDA lesser effect than Npm1 RGD PMID:11481036 RGD:1600909 NCBI chr15:45,722,282...45,729,336
Ensembl chr15:45,722,400...45,729,726 		JBrowse link
G Oga O-GlcNAcase IMP RGD PMID:19139380 RGD:2305938 NCBI chr 1:244,598,285...244,633,835
Ensembl chr 1:244,598,292...244,634,359 		JBrowse link
G Pfn1 profilin 1 IDA RGD PMID:10966486 RGD:2324858 NCBI chr10:55,365,263...55,367,968
Ensembl chr10:55,365,262...55,527,631 		JBrowse link
positive regulation of DNA recombination term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Zcwpw1 zinc finger CW-type and PWWP domain containing 1 involved_in ISO (PMID:31453335) RGD PMID:31453335 NCBI chr12:18,880,625...18,910,713
Ensembl chr12:18,880,633...18,910,711 		JBrowse link
positive regulation of DNA repair term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Abraxas1 abraxas 1, BRCA1 A complex subunit involved_in IEA
ISO
ISS		 GO_REF:0000107
(PMID:17525340), (PMID:19261748)
GO_REF:0000024		 Ensembl
RGD
UniProt		 PMID:17525340 PMID:19261748 GO_REF:0000024 GO_REF:0000107 NCBI chr14:9,100,650...9,115,012
Ensembl chr14:8,796,266...8,810,622 		JBrowse link
G Actl6a actin-like 6A involved_in ISO (PMID:23979016) RGD PMID:23979016 NCBI chr 2:117,413,206...117,436,758
Ensembl chr 2:115,492,285...115,508,401 		JBrowse link
G Actr5 actin related protein 5 involved_in ISO (PMID:23979016) RGD PMID:23979016 NCBI chr 3:147,282,461...147,295,870
Ensembl chr 3:147,282,624...147,296,110 		JBrowse link
G Actr8 actin related protein 8 involved_in ISO (PMID:23979016) RGD PMID:23979016 NCBI chr16:5,164,131...5,186,353
Ensembl chr16:5,164,129...5,178,577 		JBrowse link
G Apbb1 amyloid beta precursor protein binding family B member 1 involved_in ISO (PMID:17121854) RGD PMID:17121854 NCBI chr 1:169,308,719...169,332,372
Ensembl chr 1:159,896,880...159,920,627 		JBrowse link
G Babam1 BRISC and BRCA1 A complex member 1 involved_in ISS
ISO		 GO_REF:0000024
(PMID:19261746), (PMID:19261748), (PMID:19261749)		 UniProt
RGD		 PMID:19261746 PMID:19261748 PMID:19261749 GO_REF:0000024 NCBI chr16:18,102,885...18,108,916
Ensembl chr16:18,068,884...18,074,923 		JBrowse link
G Babam2 BRISC and BRCA1 A complex member 2 involved_in ISO
IEA
ISS		 (PMID:19261748)
GO_REF:0000104
GO_REF:0000024		 RGD
UniProt		 PMID:19261748 GO_REF:0000024 GO_REF:0000104 NCBI chr 6:24,369,021...24,788,416
Ensembl chr 6:24,369,022...24,833,951 		JBrowse link
G Brca1 BRCA1, DNA repair associated involved_in IEA
ISO		 GO_REF:0000107
(PMID:17525340), (PMID:19261748)		 Ensembl
RGD		 PMID:17525340 PMID:19261748 GO_REF:0000107 NCBI chr10:86,917,693...86,978,012
Ensembl chr10:86,418,000...86,477,304 		JBrowse link
G Brcc3 BRCA1/BRCA2-containing complex subunit 3 involved_in ISO
ISS		 (PMID:17525341), (PMID:19261746), (PMID:19261748)
GO_REF:0000024		 RGD
UniProt		 PMID:17525341 PMID:19261746 PMID:19261748 GO_REF:0000024 NCBI chr 9:1,986,942...1,989,484
Ensembl chr 9:1,986,575...1,991,080 		JBrowse link
G Brcc3dc BRCA1/BRCA2-containing complex, subunit 3, domain containing involved_in IEA GO_REF:0000104 UniProt GO_REF:0000104 NCBI chr 7:44,014,889...44,016,646
Ensembl chr 7:44,005,646...44,016,670 		JBrowse link
G Cbx8 chromobox 8 IMP RGD PMID:23572236 RGD:9586727 NCBI chr10:104,294,518...104,296,956
Ensembl chr10:104,294,518...104,297,024 		JBrowse link
G Ccdc117 coiled-coil domain containing 117 involved_in ISO
ISS		 (PMID:30742009)
GO_REF:0000024		 RGD
UniProt		 PMID:30742009 GO_REF:0000024 NCBI chr14:80,399,236...80,409,824
Ensembl chr14:80,400,294...80,409,659 		JBrowse link
G Cebpg CCAAT/enhancer binding protein gamma involved_in ISS
ISO		 PMID:16255782
(PMID:16255782)		 RGD PMID:16255782 PMID:16255782 RGD:8554294 NCBI chr 1:96,820,981...96,829,736
Ensembl chr 1:87,684,019...87,694,569 		JBrowse link
G Dhx9 DExH-box helicase 9 involved_in ISO (PMID:24049074) RGD PMID:24049074 NCBI chr13:65,602,322...65,639,098
Ensembl chr13:65,602,323...65,639,069 		JBrowse link
G Egfr epidermal growth factor receptor involved_in ISO (PMID:17115032) RGD PMID:17115032 NCBI chr14:95,378,626...95,551,358
Ensembl chr14:91,177,067...91,344,382 		JBrowse link
G Ercc6 ERCC excision repair 6, chromatin remodeling factor involved_in ISO UniProtKB:P0DP91|UniProtKB:Q03468 (PMID:22483866) RGD PMID:22483866 NCBI chr16:7,771,311...7,841,895
Ensembl chr16:7,765,013...7,835,587 		JBrowse link
G Ercc8 ERCC excision repair 8, CSA ubiquitin ligase complex subunit involved_in ISO (PMID:7664335) RGD PMID:7664335 NCBI chr 2:41,380,901...41,418,294
Ensembl chr 2:39,647,452...39,684,859 		JBrowse link
G Eya1 EYA transcriptional coactivator and phosphatase 1 involved_in ISO
IBA		 (PMID:19234442)
GO_REF:0000033		 RGD
GO_Central		 PMID:19234442 GO_REF:0000033 NCBI chr 5:4,863,501...5,101,483
Ensembl chr 5:4,955,543...5,101,483 		JBrowse link
G Eya2 EYA transcriptional coactivator and phosphatase 2 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr 3:174,754,772...174,938,035
Ensembl chr 3:154,335,400...154,518,793 		JBrowse link
G Eya3 EYA transcriptional coactivator and phosphatase 3 involved_in ISO
IBA		 (PMID:19234442)
GO_REF:0000033		 RGD
GO_Central		 PMID:19234442 GO_REF:0000033 NCBI chr 5:144,806,523...144,934,522
Ensembl chr 5:144,806,577...144,934,518 		JBrowse link
G Eya4 EYA transcriptional coactivator and phosphatase 4 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr 1:22,172,275...22,415,978
Ensembl chr 1:22,172,275...22,415,976 		JBrowse link
G Fgf10 fibroblast growth factor 10 involved_in ISO (PMID:14975937) RGD PMID:14975937 NCBI chr 2:52,533,939...52,610,980
Ensembl chr 2:50,800,992...50,876,866 		JBrowse link
G Ino80 INO80 complex ATPase subunit involved_in ISO (PMID:23979016) RGD PMID:23979016 NCBI chr 3:106,368,455...106,465,716
Ensembl chr 3:106,368,455...106,467,911 		JBrowse link
G Ino80b INO80 complex subunit B involved_in ISO (PMID:23979016) RGD PMID:23979016 NCBI chr 4:115,627,907...115,631,069
Ensembl chr 4:115,627,908...115,631,456 		JBrowse link
G Ino80c INO80 complex subunit C involved_in ISO (PMID:23979016) RGD PMID:23979016 NCBI chr18:15,378,764...15,398,574
Ensembl chr18:15,378,770...15,393,403 		JBrowse link
G Ino80d INO80 complex subunit D involved_in ISO (PMID:23979016) RGD PMID:23979016 NCBI chr 9:64,447,075...64,514,013
Ensembl chr 9:64,457,165...64,515,242 		JBrowse link
G Mcrs1 microspherule protein 1 involved_in ISO (PMID:23979016) RGD PMID:23979016 NCBI chr 7:130,383,853...130,392,667
Ensembl chr 7:130,383,853...130,392,685 		JBrowse link
G Mgmt O-6-methylguanine-DNA methyltransferase IDA RGD PMID:1945835 RGD:729332 NCBI chr 1:201,140,832...201,367,481
Ensembl chr 1:191,710,930...191,937,756 		JBrowse link
G Nfrkb nuclear factor related to kappa B binding protein involved_in ISO (PMID:23979016) RGD PMID:23979016 NCBI chr 8:29,831,802...29,863,360
Ensembl chr 8:29,831,812...29,863,359 		JBrowse link
G Npas2 neuronal PAS domain protein 2 involved_in ISO (PMID:18819933) RGD PMID:18819933 NCBI chr 9:41,463,361...41,642,322
Ensembl chr 9:41,463,830...41,642,320 		JBrowse link
G Parg poly (ADP-ribose) glycohydrolase IMP RGD PMID:15158362 RGD:2316739 NCBI chr16:7,436,429...7,544,276
Ensembl chr16:7,436,476...7,544,273 		JBrowse link
G Pcna proliferating cell nuclear antigen involved_in ISO
ISS		 (PMID:24939902)
GO_REF:0000114
GO_REF:0000024		 RGD
ComplexPortal
UniProt		 PMID:24939902 GO_REF:0000024 GO_REF:0000114 NCBI chr 3:119,499,039...119,502,911
Ensembl chr 3:119,498,810...119,502,995 		JBrowse link
G Rnf168 ring finger protein 168 involved_in IEA
ISS
ISO		 GO_REF:0000104
GO_REF:0000024
(PMID:19203578), (PMID:19203579), (PMID:23760478)		 UniProt
RGD		 PMID:19203578 PMID:19203579 PMID:23760478 GO_REF:0000024 GO_REF:0000104 NCBI chr11:68,486,313...68,508,296
Ensembl chr11:68,486,321...68,508,277 		JBrowse link
G Rnf8 ring finger protein 8 involved_in ISO
ISS		 (PMID:18001824), (PMID:18001825)
GO_REF:0000024		 RGD
UniProt		 PMID:18001824 PMID:18001825 GO_REF:0000024 NCBI chr20:7,682,258...7,710,448
Ensembl chr20:7,682,322...7,708,491 		JBrowse link
G Rps3 ribosomal protein S3 involved_in ISO (PMID:23911537) RGD PMID:23911537 NCBI chr 1:153,778,363...153,783,663
Ensembl chr 1:153,777,472...153,783,680 		JBrowse link
G Ruvbl2 RuvB-like AAA ATPase 2 involved_in ISO (PMID:23979016) RGD PMID:23979016 NCBI chr 1:95,902,014...95,915,247
Ensembl chr 1:95,901,701...95,915,342 		JBrowse link
G Sirt1 sirtuin 1 involved_in ISO (PMID:19934257) RGD PMID:19934257 NCBI chr20:25,305,953...25,328,000
Ensembl chr20:25,306,917...25,329,260 		JBrowse link
G Smchd1 structural maintenance of chromosomes flexible hinge domain containing 1 involved_in ISO (PMID:24790221) RGD PMID:24790221 NCBI chr 9:111,243,445...111,387,272
Ensembl chr 9:111,247,702...111,349,665 		JBrowse link
G Tfpt TCF3 fusion partner involved_in IEA
ISO		 GO_REF:0000107
(PMID:23979016)		 Ensembl
RGD		 PMID:23979016 GO_REF:0000107 NCBI chr 1:65,587,633...65,597,407
Ensembl chr 1:65,582,359...65,611,689 		JBrowse link
G Tigar TP53 induced glycolysis regulatory phosphatase involved_in ISO (PMID:25928429) RGD PMID:25928429 NCBI chr 4:161,613,306...161,632,248
Ensembl chr 4:159,927,139...159,946,029
Ensembl chr 6:159,927,139...159,946,029 		JBrowse link
G Tmem161a transmembrane protein 161A involved_in ISO (PMID:16551573) RGD PMID:16551573 NCBI chr16:19,237,638...19,248,151
Ensembl chr16:19,238,487...19,248,087 		JBrowse link
G Trim28 tripartite motif-containing 28 involved_in ISO (PMID:17178852) RGD PMID:17178852 NCBI chr 1:73,652,441...73,659,388
Ensembl chr 1:73,652,709...73,659,380 		JBrowse link
G Ube2n ubiquitin-conjugating enzyme E2N involved_in ISO (PMID:16129784) RGD PMID:16129784 NCBI chr 7:32,041,190...32,071,252
Ensembl chr 7:30,154,616...30,184,355 		JBrowse link
G Ube2v2 ubiquitin conjugating enzyme E2 V2 IMP RGD PMID:12750002 RGD:1299567 NCBI chr11:85,304,528...85,338,430
Ensembl chr11:85,304,526...85,336,369 		JBrowse link
G Uchl5 ubiquitin C-terminal hydrolase L5 involved_in ISO (PMID:23979016) RGD PMID:23979016 NCBI chr13:58,070,947...58,106,825
Ensembl chr13:55,520,729...55,556,502 		JBrowse link
G Uimc1 ubiquitin interaction motif containing 1 involved_in ISS
IBA
ISO
IEA		 GO_REF:0000024
GO_REF:0000033
(PMID:17525340), (PMID:17525341), (PMID:17525342), (PMID:19261748)
GO_REF:0000107		 UniProt
GO_Central
RGD
Ensembl		 PMID:17525340 PMID:17525341 PMID:17525342 PMID:19261748 GO_REF:0000024 GO_REF:0000033 GO_REF:0000107 NCBI chr17:9,523,793...9,592,810
Ensembl chr17:9,527,794...9,592,799 		JBrowse link
G Wrap53 WD repeat containing, antisense to TP53 involved_in ISO
ISS		 (PMID:25512560)
GO_REF:0000024		 RGD
UniProt		 PMID:25512560 GO_REF:0000024 NCBI chr10:54,780,873...54,797,919
Ensembl chr10:54,282,105...54,298,929 		JBrowse link
G Yy1 YY1 transcription factor involved_in ISO (PMID:23979016) RGD PMID:23979016 NCBI chr 6:133,471,615...133,500,875
Ensembl chr 6:127,707,596...127,732,747 		JBrowse link
positive regulation of DNA replication term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Atad5 ATPase family, AAA domain containing 5 involved_in ISO (PMID:23277426) RGD PMID:23277426 NCBI chr10:65,568,569...65,616,379
Ensembl chr10:65,070,689...65,117,845 		JBrowse link
G Atf1 activating transcription factor 1 IMP RGD PMID:11925444 RGD:625519 NCBI chr 7:131,361,962...131,404,677
Ensembl chr 7:131,362,450...131,404,670 		JBrowse link
G Baz1a bromodomain adjacent to zinc finger domain, 1A involved_in ISO
IBA		 (PMID:12434153)
GO_REF:0000033		 RGD
GO_Central		 PMID:12434153 GO_REF:0000033 NCBI chr 6:72,389,701...72,512,516
Ensembl chr 6:72,389,703...72,512,459 		JBrowse link
G Brpf3 bromodomain and PHD finger containing, 3 involved_in ISO (PMID:26620551) RGD PMID:26620551 NCBI chr20:6,864,684...6,902,760
Ensembl chr20:6,865,985...6,902,690 		JBrowse link
G Cacybp calcyclin binding protein IDA mRNA:increased expression:heart RGD PMID:16440310 RGD:2326117 NCBI chr13:72,437,485...72,447,810
Ensembl chr13:72,437,490...72,450,177 		JBrowse link
G Cdc42 cell division cycle 42 IMP RGD PMID:9487126 RGD:2293350 NCBI chr 5:154,838,478...154,876,629
Ensembl chr 5:149,553,724...149,593,111 		JBrowse link
G Cdk1 cyclin-dependent kinase 1 IMP RGD PMID:19821535 RGD:2316313 NCBI chr20:19,265,252...19,280,456
Ensembl chr20:19,266,248...19,281,408 		JBrowse link
G Cdt1 chromatin licensing and DNA replication factor 1 involved_in ISO (PMID:26842564) RGD PMID:26842564 NCBI chr19:50,620,713...50,625,659
Ensembl chr19:50,620,713...50,625,659 		JBrowse link
G Cst3 cystatin C IDA In rat mesangial cells RGD PMID:1540157 RGD:2306501 NCBI chr 3:156,790,061...156,794,116
Ensembl chr 3:136,336,920...136,340,822 		JBrowse link
G Ctc1 CST telomere replication complex component 1 involved_in IBA
ISO		 GO_REF:0000033
(PMID:19119139)		 GO_Central
RGD		 PMID:19119139 GO_REF:0000033 NCBI chr10:53,714,614...53,735,298
Ensembl chr10:53,714,644...53,735,298 		JBrowse link
G Dhx9 DExH-box helicase 9 involved_in ISO (PMID:24990949) RGD PMID:24990949 NCBI chr13:65,602,322...65,639,098
Ensembl chr13:65,602,323...65,639,069 		JBrowse link
G Dna2 DNA replication helicase/nuclease 2 involved_in IEA GO_REF:0000107 Ensembl GO_REF:0000107 NCBI chr20:25,661,652...25,690,598
Ensembl chr20:25,662,055...25,716,319 		JBrowse link
G Egfr epidermal growth factor receptor involved_in ISO (PMID:17115032) RGD PMID:17115032 NCBI chr14:95,378,626...95,551,358
Ensembl chr14:91,177,067...91,344,382 		JBrowse link
G Ereg epiregulin involved_in ISS
ISO
IDA		 GO_REF:0000024
(PMID:7706296), (PMID:9337852)
PMID:9990076
(PMID:10681561), (PMID:9337852)		 UniProt
RGD		 PMID:7706296 PMID:9337852 PMID:10681561 PMID:9990076 GO_REF:0000024, RGD:632743 NCBI chr14:17,311,485...17,325,260
Ensembl chr14:17,027,287...17,041,062 		JBrowse link
G Faf1 Fas associated factor 1 involved_in ISO
IEA		 (PMID:26842564)
GO_REF:0000107		 RGD
Ensembl		 PMID:26842564 GO_REF:0000107 NCBI chr 5:124,426,032...124,790,014
Ensembl chr 5:124,426,062...124,789,977 		JBrowse link
G Gli1 GLI family zinc finger 1 involved_in ISO (PMID:12165851) RGD PMID:12165851 NCBI chr 7:65,042,237...65,054,888
Ensembl chr 7:63,156,926...63,169,251 		JBrowse link
G Gli2 GLI family zinc finger 2 involved_in ISO (PMID:12165851) RGD PMID:12165851 NCBI chr13:32,499,678...32,716,418
Ensembl chr13:29,946,809...30,163,574 		JBrowse link
G Hras HRas proto-oncogene, GTPase IMP RGD PMID:9487126 RGD:2293350 NCBI chr 1:205,712,625...205,729,406
Ensembl chr 1:196,296,263...196,300,615 		JBrowse link
G Il6 interleukin 6 IMP RGD PMID:15828022 RGD:2306943 NCBI chr 4:5,889,999...5,894,575
Ensembl chr 4:5,213,394...5,219,178 		JBrowse link
G Ins2 insulin 2 involved_in ISO (PMID:7513704) RGD PMID:7513704 NCBI chr 1:207,272,738...207,421,998
Ensembl chr 1:197,843,281...197,864,775 		JBrowse link
G Jun Jun proto-oncogene, AP-1 transcription factor subunit IMP RGD PMID:9487126 RGD:2293350 NCBI chr 5:115,009,900...115,012,993
Ensembl chr 5:109,893,145...109,897,656 		JBrowse link
G Kat7 lysine acetyltransferase 7 involved_in ISO
ISS		 (PMID:26620551)
GO_REF:0000024		 RGD
UniProt		 PMID:26620551 GO_REF:0000024 NCBI chr10:80,718,335...80,752,387
Ensembl chr10:80,221,524...80,255,567 		JBrowse link
G Kctd13 potassium channel tetramerization domain containing 13 IDA RGD PMID:15726626 RGD:1357162 NCBI chr 1:181,534,534...181,552,843
Ensembl chr 1:181,534,515...181,552,881 		JBrowse link
G Map2k4 mitogen activated protein kinase kinase 4 IMP RGD PMID:9487126 RGD:2293350 NCBI chr10:50,842,348...50,947,063
Ensembl chr10:50,344,915...50,447,993 		JBrowse link
G Mapk8 mitogen-activated protein kinase 8 IMP RGD PMID:9487126 RGD:2293350 NCBI chr16:8,645,171...8,728,225
Ensembl chr16:8,638,924...8,721,981 		JBrowse link
G Mas1 MAS1 proto-oncogene, G protein-coupled receptor IDA RGD PMID:1332507 RGD:2316794 NCBI chr 1:50,428,064...50,459,537
Ensembl chr 1:47,880,309...47,911,709 		JBrowse link
G Met MET proto-oncogene, receptor tyrosine kinase IMP RGD PMID:17427161 RGD:2317489 NCBI chr 4:46,756,823...46,864,041
Ensembl chr 4:45,790,791...45,897,876 		JBrowse link
G Npm1 nucleophosmin 1 IDA RGD PMID:11481036 RGD:1600909 NCBI chr10:17,741,512...17,751,626
Ensembl chr10:17,739,941...17,751,645
Ensembl chr  X:17,739,941...17,751,645 		JBrowse link
G Npm2 nucleophosmin/nucleoplasmin 2 involved_in IDA
IBA		 lesser effect than Npm1
GO_REF:0000033		 GO_Central
RGD		 PMID:11481036 GO_REF:0000033, RGD:1600909 NCBI chr15:45,722,282...45,729,336
Ensembl chr15:45,722,400...45,729,726 		JBrowse link
G Pcna proliferating cell nuclear antigen involved_in ISO
ISS		 (PMID:24939902)
GO_REF:0000114
GO_REF:0000024		 RGD
ComplexPortal
UniProt		 PMID:24939902 GO_REF:0000024 GO_REF:0000114 NCBI chr 3:119,499,039...119,502,911
Ensembl chr 3:119,498,810...119,502,995 		JBrowse link
G Pdgfb platelet derived growth factor subunit B IMP RGD PMID:12084843 RGD:1581760 NCBI chr 7:113,419,882...113,438,343
Ensembl chr 7:111,540,345...111,557,984 		JBrowse link
G Rac1 Rac family small GTPase 1 IMP RGD PMID:9487126 RGD:2293350 NCBI chr12:16,150,411...16,170,864
Ensembl chr12:11,036,698...11,057,251 		JBrowse link
G Smarca5 SNF2 related chromatin remodeling ATPase 5 involved_in ISO (PMID:12434153) RGD PMID:12434153 NCBI chr19:27,271,918...27,304,594
Ensembl chr19:27,271,148...27,304,594 		JBrowse link
G Stn1 STN1 subunit of CST complex involved_in ISS
ISO
IEA		 GO_REF:0000024
(PMID:19119139)
GO_REF:0000107		 UniProt
RGD
Ensembl		 PMID:19119139 GO_REF:0000024 GO_REF:0000107 NCBI chr 1:256,336,916...256,371,143
Ensembl chr 1:246,395,613...246,429,531 		JBrowse link
G Tnfaip1 TNF alpha induced protein 1 IDA RGD PMID:15726626 RGD:1357162 NCBI chr10:63,915,824...63,930,514
Ensembl chr10:63,417,775...63,432,466 		JBrowse link
G Ucn urocortin IDA RGD PMID:11087261 RGD:1642796 NCBI chr 6:25,238,120...25,238,950
Ensembl chr 6:25,238,120...25,238,950 		JBrowse link
positive regulation of DNA strand elongation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Pot1 protection of telomeres 1 involved_in ISO (PMID:16043710) RGD PMID:16043710 NCBI chr 4:55,170,821...55,228,588
Ensembl chr 4:54,205,332...54,263,042 		JBrowse link
positive regulation of DNA-directed DNA polymerase activity term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Chtf18 chromosome transmission fidelity factor 18 involved_in ISO (PMID:12930902) RGD PMID:12930902 NCBI chr10:14,743,006...14,751,044
Ensembl chr10:14,742,621...14,751,050 		JBrowse link
G Chtf8 chromosome transmission fidelity factor 8 involved_in ISS
ISO		 GO_REF:0000024
(PMID:12930902)		 UniProt
RGD		 PMID:12930902 GO_REF:0000024 NCBI chr19:34,782,005...34,792,306
Ensembl chr19:34,781,856...34,792,578 		JBrowse link
G Dscc1 DNA replication and sister chromatid cohesion 1 involved_in ISO (PMID:12930902) RGD PMID:12930902 NCBI chr 7:86,482,588...86,498,212
Ensembl chr 7:86,482,588...86,498,212 		JBrowse link
G Npm1 nucleophosmin 1 IDA RGD PMID:8123045 RGD:11535022 NCBI chr10:17,741,512...17,751,626
Ensembl chr10:17,739,941...17,751,645
Ensembl chr  X:17,739,941...17,751,645 		JBrowse link
G Pcna proliferating cell nuclear antigen involved_in ISO (PMID:11595739) RGD PMID:11595739 NCBI chr 3:119,499,039...119,502,911
Ensembl chr 3:119,498,810...119,502,995 		JBrowse link
G Polg2 DNA polymerase gamma 2, accessory subunit involved_in ISO (PMID:10608893) RGD PMID:10608893 NCBI chr10:92,212,303...92,222,849
Ensembl chr10:91,712,586...91,723,008 		JBrowse link
G Rfc2 replication factor C subunit 2 involved_in ISS
ISO		 GO_REF:0000024
(PMID:12930902)		 UniProt
RGD		 PMID:12930902 GO_REF:0000024 NCBI chr12:22,120,449...22,133,576
Ensembl chr12:22,120,010...22,133,557 		JBrowse link
G Rfc3 replication factor C subunit 3 involved_in ISO (PMID:12930902) RGD PMID:12930902 NCBI chr12:1,000,987...1,011,778
Ensembl chr12:1,000,994...1,011,778 		JBrowse link
G Rfc4 replication factor C subunit 4 involved_in ISO (PMID:12930902) RGD PMID:12930902 NCBI chr11:77,749,642...77,764,123
Ensembl chr11:77,749,638...77,764,122 		JBrowse link
G Rfc5 replication factor C subunit 5 involved_in ISO (PMID:12930902) RGD PMID:12930902 NCBI chr12:39,207,484...39,217,041
Ensembl chr12:39,207,484...39,217,312 		JBrowse link
positive regulation of DNA-templated DNA replication term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ager advanced glycosylation end product-specific receptor involved_in IEA
ISO
ISS		 GO_REF:0000107
(PMID:36807739)
GO_REF:0000024		 Ensembl
RGD
UniProt		 PMID:36807739 GO_REF:0000024 GO_REF:0000107 NCBI chr20:4,152,758...4,155,956
Ensembl chr20:4,147,890...4,151,078 		JBrowse link
G Cdt1 chromatin licensing and DNA replication factor 1 involved_in ISO (PMID:11125146) RGD PMID:11125146 NCBI chr19:50,620,713...50,625,659
Ensembl chr19:50,620,713...50,625,659 		JBrowse link
positive regulation of DNA-templated DNA replication initiation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Cdk2 cyclin dependent kinase 2 involved_in
acts_upstream_of_or_within		 IEA
ISO		 GO_REF:0000107
MGI:1920234 (PMID:20215406)		 Ensembl
RGD		 PMID:20215406 GO_REF:0000107 NCBI chr 7:1,714,392...1,721,964
Ensembl chr 7:1,129,811...1,137,403 		JBrowse link
G Ciz1 CDKN1A interacting zinc finger protein 1 acts_upstream_of_or_within ISO MGI:104772 (PMID:15585571), (PMID:20215406) RGD PMID:15585571 PMID:20215406 NCBI chr 3:15,658,479...15,673,762
Ensembl chr 3:15,658,539...15,673,762 		JBrowse link
positive regulation of double-strand break repair term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ager advanced glycosylation end product-specific receptor involved_in IEA
ISO
ISS		 GO_REF:0000107
(PMID:28977635)
GO_REF:0000024		 Ensembl
RGD
UniProt		 PMID:28977635 GO_REF:0000024 GO_REF:0000107 NCBI chr20:4,152,758...4,155,956
Ensembl chr20:4,147,890...4,151,078 		JBrowse link
G Atm ATM serine/threonine kinase involved_in IEA
ISO		 GO_REF:0000107
(PMID:15790808)		 Ensembl
RGD		 PMID:15790808 GO_REF:0000107 NCBI chr 8:62,724,939...62,829,040
Ensembl chr 8:53,831,093...53,932,437 		JBrowse link
G Ddx11 DEAD/H-box helicase 11 involved_in ISO (PMID:23797032) RGD PMID:23797032 NCBI chr 9:105,833,234...105,862,844
Ensembl chr 9:105,833,504...105,862,550 		JBrowse link
G Fmn2 formin 2 involved_in ISO (PMID:26287480) RGD PMID:26287480 NCBI chr13:88,986,863...89,303,789
Ensembl chr13:86,453,926...86,771,411 		JBrowse link
G Foxm1 forkhead box M1 involved_in ISO
IEA		 (PMID:17101782)
GO_REF:0000107		 RGD
Ensembl		 PMID:17101782 GO_REF:0000107 NCBI chr 4:163,325,628...163,338,100
Ensembl chr 4:161,638,816...161,650,684 		JBrowse link
G Khdc3 KH domain containing 3, subcortical maternal complex member involved_in ISS
ISO		 GO_REF:0000024
(PMID:29125140), (PMID:33115731)		 UniProt
RGD		 PMID:29125140 PMID:33115731 GO_REF:0000024 NCBI chr 8:82,722,980...82,724,884
Ensembl chr 8:73,842,344...73,844,248 		JBrowse link
G Mgmt O-6-methylguanine-DNA methyltransferase involved_in ISO
IEA		 (PMID:24147153)
GO_REF:0000107		 RGD
Ensembl		 PMID:24147153 GO_REF:0000107 NCBI chr 1:201,140,832...201,367,481
Ensembl chr 1:191,710,930...191,937,756 		JBrowse link
G Mre11 MRE11 homolog, double strand break repair nuclease involved_in IEA
ISO		 GO_REF:0000107
(PMID:15790808)		 Ensembl
RGD		 PMID:15790808 GO_REF:0000107 NCBI chr 8:19,900,211...19,961,906
Ensembl chr 8:11,632,354...11,678,279 		JBrowse link
G Nbn nibrin involved_in IEA
ISO		 GO_REF:0000107
(PMID:15790808)		 Ensembl
RGD		 PMID:15790808 GO_REF:0000107 NCBI chr 5:34,256,678...34,291,163
Ensembl chr 5:29,459,457...29,494,150 		JBrowse link
G Ooep oocyte expressed protein involved_in ISO (PMID:29125140) RGD PMID:29125140 NCBI chr 8:79,223,388...79,224,554
Ensembl chr 8:79,223,375...79,224,541 		JBrowse link
G Rad50 RAD50 double strand break repair protein involved_in IEA
ISO		 GO_REF:0000107
(PMID:15790808)		 Ensembl
RGD		 PMID:15790808 GO_REF:0000107 NCBI chr10:38,310,147...38,362,100
Ensembl chr10:37,808,726...37,861,396 		JBrowse link
G Sirt1 sirtuin 1 involved_in ISO
IEA		 (PMID:32538779)
GO_REF:0000107		 RGD
Ensembl		 PMID:32538779 GO_REF:0000107 NCBI chr20:25,305,953...25,328,000
Ensembl chr20:25,306,917...25,329,260 		JBrowse link
G Sirt6 sirtuin 6 involved_in ISO (PMID:23911928), (PMID:31995034), (PMID:32538779)
(PMID:31002797)		 RGD PMID:23911928 PMID:31002797 PMID:31995034 PMID:32538779 NCBI chr 7:8,082,312...8,087,776
Ensembl chr 7:8,082,364...8,098,914 		JBrowse link
G Slf1 SMC5-SMC6 complex localization factor 1 involved_in ISO (PMID:25931565) RGD PMID:25931565 NCBI chr 2:6,767,015...6,874,428
Ensembl chr 2:6,767,015...6,867,149 		JBrowse link
G Slf2 SMC5-SMC6 complex localization factor 2 involved_in ISO
IBA		 (PMID:25931565)
GO_REF:0000033		 RGD
GO_Central		 PMID:25931565 GO_REF:0000033 NCBI chr 1:243,782,786...243,845,418
Ensembl chr 1:243,782,246...243,845,250 		JBrowse link
G Spidr scaffold protein involved in DNA repair involved_in ISO (PMID:23509288) RGD PMID:23509288 NCBI chr11:98,270,779...98,511,760
Ensembl chr11:84,766,593...85,007,600 		JBrowse link
G Spire1 spire-type actin nucleation factor 1 involved_in ISO (PMID:26287480) RGD PMID:26287480 NCBI chr18:61,041,914...61,171,670
Ensembl chr18:61,041,290...61,171,899 		JBrowse link
G Spire2 spire-type actin nucleation factor 2 involved_in ISO (PMID:26287480) RGD PMID:26287480 NCBI chr19:51,373,368...51,411,920
Ensembl chr19:51,373,228...51,411,920 		JBrowse link
G Timeless timeless circadian regulator involved_in ISO
ISS		 (PMID:23797032)
GO_REF:0000024		 RGD
UniProt		 PMID:23797032 GO_REF:0000024 NCBI chr 7:654,804...678,769
Ensembl chr 7:654,822...678,738 		JBrowse link
G Ube2n ubiquitin-conjugating enzyme E2N involved_in ISO (PMID:16129784) RGD PMID:16129784 NCBI chr 7:32,041,190...32,071,252
Ensembl chr 7:30,154,616...30,184,355 		JBrowse link
G Ube2v2 ubiquitin conjugating enzyme E2 V2 involved_in ISO
IEA		 (PMID:16129784)
GO_REF:0000107		 RGD
Ensembl		 PMID:16129784 GO_REF:0000107 NCBI chr11:85,304,528...85,338,430
Ensembl chr11:85,304,526...85,336,369 		JBrowse link
G Wrap53 WD repeat containing, antisense to TP53 involved_in ISS
ISO		 GO_REF:0000024
(PMID:27715493)		 UniProt
RGD		 PMID:27715493 GO_REF:0000024 NCBI chr10:54,780,873...54,797,919
Ensembl chr10:54,282,105...54,298,929 		JBrowse link
G Zcwpw1 zinc finger CW-type and PWWP domain containing 1 involved_in ISO (PMID:31453335), (PMID:32352380), (PMID:32374261), (PMID:32744506) RGD PMID:31453335 PMID:32352380 PMID:32374261 PMID:32744506 NCBI chr12:18,880,625...18,910,713
Ensembl chr12:18,880,633...18,910,711 		JBrowse link
positive regulation of double-strand break repair via homologous recombination term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Actb actin, beta involved_in ISO
IEA		 (PMID:27153538)
GO_REF:0000107		 RGD
Ensembl		 PMID:27153538 GO_REF:0000107 NCBI chr12:16,776,664...16,779,634
Ensembl chr12:11,663,109...11,672,877 		JBrowse link
G Actl6a actin-like 6A involved_in ISO (PMID:27153538) RGD PMID:27153538 NCBI chr 2:117,413,206...117,436,758
Ensembl chr 2:115,492,285...115,508,401 		JBrowse link
G Actr2 actin related protein 2 involved_in ISO
ISS		 (PMID:29925947)
GO_REF:0000024		 RGD
UniProt		 PMID:29925947 GO_REF:0000024 NCBI chr14:94,296,443...94,333,735
Ensembl chr14:94,296,443...94,340,524 		JBrowse link
G Arid2 AT-rich interaction domain 2 involved_in ISO (PMID:28381560) RGD PMID:28381560 NCBI chr 7:127,447,192...127,565,987
Ensembl chr 7:127,447,278...127,563,512 		JBrowse link
G Blm BLM RecQ like helicase acts_upstream_of_or_within ISO MGI:2448558 (PMID:25520194) RGD PMID:25520194 NCBI chr 1:143,819,072...143,905,300
Ensembl chr 1:134,409,857...134,484,312 		JBrowse link
G Brd8 bromodomain containing 8 involved_in ISO (PMID:27153538) RGD PMID:27153538 NCBI chr18:26,204,892...26,229,999
Ensembl chr18:26,181,732...26,229,884 		JBrowse link
G Crebbp CREB binding protein involved_in ISS
ISO
IEA		 GO_REF:0000024
(PMID:38128537)
GO_REF:0000107		 UniProt
RGD
Ensembl		 PMID:38128537 GO_REF:0000024 GO_REF:0000107 NCBI chr10:11,842,307...11,968,266
Ensembl chr10:11,335,953...11,461,888 		JBrowse link
G Dmap1 DNA methyltransferase 1-associated protein 1 involved_in ISO (PMID:27153538) RGD PMID:27153538 NCBI chr 5:131,143,726...131,151,760
Ensembl chr 5:131,143,729...131,151,742 		JBrowse link
G Ep400 E1A binding protein p400 involved_in ISO (PMID:27153538) RGD PMID:27153538 NCBI chr12:45,891,886...46,002,523
Ensembl chr12:45,891,916...45,998,861 		JBrowse link
G Epc1 enhancer of polycomb homolog 1 involved_in ISO (PMID:27153538) RGD PMID:27153538 NCBI chr17:54,503,358...54,594,444
Ensembl chr17:54,503,358...54,594,425 		JBrowse link
G Epc2 enhancer of polycomb homolog 2 involved_in ISO (PMID:27153538) RGD PMID:27153538 NCBI chr 3:54,276,187...54,376,373
Ensembl chr 3:33,867,219...33,967,150 		JBrowse link
G Ercc6 ERCC excision repair 6, chromatin remodeling factor involved_in ISO (PMID:25820262) RGD PMID:25820262 NCBI chr16:7,771,311...7,841,895
Ensembl chr16:7,765,013...7,835,587 		JBrowse link
G Fancb FA complementation group B involved_in
acts_upstream_of_or_within		 IBA
ISO		 GO_REF:0000033
MGI:1328362 (PMID:25520194)		 GO_Central
RGD		 PMID:25520194 GO_REF:0000033 NCBI chr  X:29,403,771...29,420,484
Ensembl chr  X:29,403,771...29,420,192 		JBrowse link
G Fus Fus RNA binding protein involved_in ISO (PMID:10567410) RGD PMID:10567410 NCBI chr 1:182,576,479...182,590,417
Ensembl chr 1:182,576,545...182,590,414 		JBrowse link
G Hdgfl2 HDGF like 2 involved_in ISO
IEA
ISS		 (PMID:26721387)
GO_REF:0000107
GO_REF:0000024		 RGD
Ensembl
UniProt		 PMID:26721387 GO_REF:0000024 GO_REF:0000107 NCBI chr 9:909,581...929,195
Ensembl chr 9:909,614...929,186 		JBrowse link
G Helq helicase, POLQ-like involved_in ISO (PMID:24005329) RGD PMID:24005329 NCBI chr14:8,818,582...8,862,926
Ensembl chr14:8,818,592...8,862,960 		JBrowse link
G Ing3 inhibitor of growth family, member 3 involved_in ISO (PMID:27153538) RGD PMID:27153538 NCBI chr 4:50,477,954...50,505,168
Ensembl chr 4:50,477,962...50,503,715 		JBrowse link
G Kat5 lysine acetyltransferase 5 involved_in ISS
ISO
IEA		 GO_REF:0000024
(PMID:27153538), (PMID:32832608), (PMID:38961290)
GO_REF:0000107		 UniProt
RGD
Ensembl		 PMID:27153538 PMID:32832608 PMID:38961290 GO_REF:0000024 GO_REF:0000107 NCBI chr 1:212,325,089...212,332,640
Ensembl chr 1:202,895,751...202,903,458 		JBrowse link
G Khdc3 KH domain containing 3, subcortical maternal complex member involved_in ISO
ISS		 (PMID:31609975)
(PMID:25936915)
GO_REF:0000024		 RGD
UniProt		 PMID:25936915 PMID:31609975 GO_REF:0000024 NCBI chr 8:82,722,980...82,724,884
Ensembl chr 8:73,842,344...73,844,248 		JBrowse link
G Mbtd1 mbt domain containing 1 involved_in ISO (PMID:27153538) RGD PMID:27153538 NCBI chr10:79,336,041...79,392,315
Ensembl chr10:78,839,036...78,893,720 		JBrowse link
G Meaf6 MYST/Esa1-associated factor 6 involved_in ISO (PMID:27153538) RGD PMID:27153538 NCBI chr 5:137,344,681...137,369,703
Ensembl chr 5:137,344,380...137,370,014 		JBrowse link
G Morf4l1 mortality factor 4 like 1 involved_in ISO
IEA		 (PMID:27153538)
GO_REF:0000107		 RGD
Ensembl		 PMID:27153538 GO_REF:0000107 NCBI chr 8:90,642,988...90,664,518
Ensembl chr 8:90,642,988...90,664,519 		JBrowse link
G Morf4l2 mortality factor 4 like 2 involved_in ISO (PMID:27153538) RGD PMID:27153538 NCBI chr  X:100,082,562...100,093,658
Ensembl chr  X:100,082,404...100,093,728 		JBrowse link
G Mrgbp MRG domain binding protein involved_in ISO (PMID:27153538) RGD PMID:27153538 NCBI chr 3:167,697,129...167,700,592
Ensembl chr 3:167,697,185...167,700,592 		JBrowse link
G Mrnip MRN complex interacting protein involved_in ISO (PMID:27568553) RGD PMID:27568553 NCBI chr10:34,501,359...34,525,474
Ensembl chr10:34,501,384...34,525,469 		JBrowse link
G Ooep oocyte expressed protein involved_in ISO (PMID:29955025) RGD PMID:29955025 NCBI chr 8:79,223,388...79,224,554
Ensembl chr 8:79,223,375...79,224,541 		JBrowse link
G Parp1 poly (ADP-ribose) polymerase 1 involved_in ISO
ISS		 (PMID:26344098), (PMID:30356214)
GO_REF:0000024		 RGD
UniProt		 PMID:26344098 PMID:30356214 GO_REF:0000024 NCBI chr13:94,839,484...94,871,295
Ensembl chr13:92,307,586...92,339,404 		JBrowse link
G Peli1 pellino E3 ubiquitin protein ligase 1 involved_in ISO (PMID:30952868) RGD PMID:30952868 NCBI chr14:95,254,274...95,309,168
Ensembl chr14:95,254,589...95,308,285
Ensembl chr 1:95,254,589...95,308,285 		JBrowse link
G Pias4 protein inhibitor of activated STAT, 4 involved_in ISO (PMID:32832608) RGD PMID:32832608 NCBI chr 7:9,197,032...9,210,557
Ensembl chr 7:8,546,312...8,559,808 		JBrowse link
G Prmt1 protein arginine methyltransferase 1 involved_in ISS
ISO		 GO_REF:0000024
(PMID:15741314), (PMID:29651020)		 UniProt
RGD		 PMID:15741314 PMID:29651020 GO_REF:0000024 NCBI chr 1:104,595,339...104,605,552
Ensembl chr 1:95,458,850...95,468,345 		JBrowse link
G Rad51ap1 RAD51 associated protein 1 involved_in ISO (PMID:17996710), (PMID:17996711) RGD PMID:17996710 PMID:17996711 NCBI chr 4:159,759,454...159,772,473
Ensembl chr 4:159,759,459...159,772,524 		JBrowse link
G Rnf126 ring finger protein 126 involved_in ISO (PMID:36563124) RGD PMID:36563124 NCBI chr 7:9,939,359...9,946,963
Ensembl chr 7:9,938,229...9,946,738 		JBrowse link
G Rnf8 ring finger protein 8 involved_in ISS
ISO		 GO_REF:0000024
(PMID:23115235)		 UniProt
RGD		 PMID:23115235 GO_REF:0000024 NCBI chr20:7,682,258...7,710,448
Ensembl chr20:7,682,322...7,708,491 		JBrowse link
G Ruvbl1 RuvB-like AAA ATPase 1 involved_in ISO (PMID:27153538) RGD PMID:27153538 NCBI chr 4:120,932,486...120,967,400
Ensembl chr 4:120,932,417...121,029,384 		JBrowse link
G Ruvbl2 RuvB-like AAA ATPase 2 involved_in ISO (PMID:27153538) RGD PMID:27153538 NCBI chr 1:95,902,014...95,915,247
Ensembl chr 1:95,901,701...95,915,342 		JBrowse link
G Skp2 S-phase kinase associated protein 2 involved_in ISO (PMID:22464731) RGD PMID:22464731 NCBI chr 2:59,888,406...59,916,471
Ensembl chr 2:58,161,229...58,189,338 		JBrowse link
G Timeless timeless circadian regulator involved_in ISO
IEA
ISS		 (PMID:26344098), (PMID:30356214)
GO_REF:0000107
GO_REF:0000024		 RGD
Ensembl
UniProt		 PMID:26344098 PMID:30356214 GO_REF:0000024 GO_REF:0000107 NCBI chr 7:654,804...678,769
Ensembl chr 7:654,822...678,738 		JBrowse link
G Trrap transformation/transcription domain-associated protein involved_in ISO (PMID:27153538) RGD PMID:27153538 NCBI chr12:9,738,006...9,827,708
Ensembl chr12:9,738,006...9,827,674 		JBrowse link
G Vps72 vacuolar protein sorting 72 homolog involved_in ISO (PMID:27153538) RGD PMID:27153538 NCBI chr 2:182,678,594...182,690,185
Ensembl chr 2:182,678,609...182,690,182 		JBrowse link
G Was WASP actin nucleation promoting factor involved_in ISO (PMID:29925947) RGD PMID:29925947 NCBI chr  X:17,077,057...17,085,802
Ensembl chr  X:14,405,124...14,413,849 		JBrowse link
G Wdr48 WD repeat domain 48 involved_in ISO (PMID:27239033), (PMID:27463890) RGD PMID:27239033 PMID:27463890 NCBI chr 8:119,622,053...119,655,264
Ensembl chr 8:119,622,048...119,655,264 		JBrowse link
G Wrap53 WD repeat containing, antisense to TP53 involved_in ISO
ISS		 (PMID:25512560)
GO_REF:0000024		 RGD
UniProt		 PMID:25512560 GO_REF:0000024 NCBI chr10:54,780,873...54,797,919
Ensembl chr10:54,282,105...54,298,929 		JBrowse link
G Yeats4 YEATS domain containing 4 involved_in ISO (PMID:27153538) RGD PMID:27153538 NCBI chr 7:52,858,313...52,865,454
Ensembl chr 7:52,858,305...52,865,635 		JBrowse link
positive regulation of double-strand break repair via nonhomologous end joining term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Cyren cell cycle regulator of NHEJ involved_in IEA
ISO		 GO_REF:0000107
(PMID:30017584)		 Ensembl
RGD		 PMID:30017584 GO_REF:0000107 NCBI chr 4:63,547,311...63,553,394
Ensembl chr 4:63,547,335...63,551,602 		JBrowse link
G Fh fumarate hydratase involved_in ISO
ISS		 (PMID:26237645)
GO_REF:0000024		 RGD
UniProt		 PMID:26237645 GO_REF:0000024 NCBI chr13:90,056,565...90,082,450
Ensembl chr13:87,524,337...87,550,266 		JBrowse link
G Kdm4d lysine demethylase 4D acts_upstream_of_or_within ISO (PMID:24550317) RGD PMID:24550317 NCBI chr 8:11,279,756...11,304,920
Ensembl chr 8:11,268,859...11,305,290 		JBrowse link
G Kmt5b lysine methyltransferase 5B involved_in ISS
ISO		 GO_REF:0000024
(PMID:28114273)		 UniProt
RGD		 PMID:28114273 GO_REF:0000024 NCBI chr 1:201,000,444...201,049,819
Ensembl chr 1:201,000,444...201,049,819 		JBrowse link
G Kmt5c lysine methyltransferase 5C involved_in ISO
ISS		 (PMID:28114273)
GO_REF:0000024		 RGD
UniProt		 PMID:28114273 GO_REF:0000024 NCBI chr 1:78,128,325...78,135,931
Ensembl chr 1:69,099,539...69,107,145 		JBrowse link
G Mad2l2 mitotic arrest deficient 2 like 2 involved_in ISO (PMID:29656893) RGD PMID:29656893 NCBI chr 5:158,563,545...158,576,698
Ensembl chr 5:158,563,567...158,576,693 		JBrowse link
G Parp3 poly (ADP-ribose) polymerase family, member 3 involved_in ISO (PMID:24598253) RGD PMID:24598253 NCBI chr 8:115,989,721...115,995,822
Ensembl chr 8:107,111,012...107,116,782 		JBrowse link
G Pnkp polynucleotide kinase 3'-phosphatase involved_in ISO (PMID:12032095) RGD PMID:12032095 NCBI chr 1:95,341,465...95,346,921
Ensembl chr 1:95,341,620...95,346,920 		JBrowse link
G Prkdc protein kinase, DNA-activated, catalytic subunit involved_in ISO (PMID:26237645) RGD PMID:26237645 NCBI chr11:98,544,952...98,762,499
Ensembl chr11:85,040,792...85,257,952 		JBrowse link
G Rif1 replication timing regulatory factor 1 involved_in ISO (PMID:28241136)
(PMID:23306437), (PMID:23333305)		 RGD PMID:23306437 PMID:23333305 PMID:28241136 NCBI chr 3:36,554,689...36,607,961
Ensembl chr 3:36,554,697...36,603,617 		JBrowse link
G Setmar SET domain and mariner transposase fusion gene involved_in ISO (PMID:20620605), (PMID:21491884) RGD PMID:20620605 PMID:21491884 NCBI chr 4:141,046,058...141,058,183
Ensembl chr 4:141,046,069...141,058,197 		JBrowse link
G Shld1 shieldin complex subunit 1 involved_in ISO
IBA		 (PMID:29656893)
GO_REF:0000033		 RGD
GO_Central		 PMID:29656893 GO_REF:0000033 NCBI chr 3:119,938,695...120,011,068
Ensembl chr 3:119,938,833...120,009,550 		JBrowse link
G Shld2 shieldin complex subunit 2 involved_in ISO (PMID:29656893), (PMID:29789392) RGD PMID:29656893 PMID:29789392 NCBI chr16:9,554,921...9,646,186
Ensembl chr16:9,548,660...9,639,965 		JBrowse link
G Shld3 shieldin complex subunit 3 involved_in ISO
IBA		 (PMID:29656893)
GO_REF:0000033		 RGD
GO_Central		 PMID:29656893 GO_REF:0000033 NCBI chr 2:35,297,255...35,302,071
Ensembl chr 2:35,295,859...35,302,346 		JBrowse link
G Smchd1 structural maintenance of chromosomes flexible hinge domain containing 1 involved_in ISO (PMID:25294876) RGD PMID:25294876 NCBI chr 9:111,243,445...111,387,272
Ensembl chr 9:111,247,702...111,349,665 		JBrowse link
G Top2b DNA topoisomerase II beta IMP RGD PMID:22019940 RGD:13432143 NCBI chr15:9,051,340...9,111,721
Ensembl chr15:9,051,341...9,112,085 		JBrowse link
G Wrap53 WD repeat containing, antisense to TP53 involved_in ISS
ISO		 GO_REF:0000024
(PMID:25512560)		 UniProt
RGD		 PMID:25512560 GO_REF:0000024 NCBI chr10:54,780,873...54,797,919
Ensembl chr10:54,282,105...54,298,929 		JBrowse link
positive regulation of endodeoxyribonuclease activity term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Akt1 AKT serine/threonine kinase 1 involved_in ISO (PMID:20605787) RGD PMID:20605787 NCBI chr 6:137,534,810...137,555,131
Ensembl chr 6:131,713,720...131,733,921 		JBrowse link
G Prkcd protein kinase C, delta involved_in ISO (PMID:19059439) RGD PMID:19059439 NCBI chr16:5,775,681...5,806,122
Ensembl chr16:5,769,215...5,799,352 		JBrowse link
G Rps3 ribosomal protein S3 involved_in ISO (PMID:18973764) RGD PMID:18973764 NCBI chr 1:153,778,363...153,783,663
Ensembl chr 1:153,777,472...153,783,680 		JBrowse link
positive regulation of interleukin-4-dependent isotype switching to IgE isotypes term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Tnfsf4 TNF superfamily member 4 involved_in ISO (PMID:12496423) RGD PMID:12496423 NCBI chr13:76,256,654...76,280,133
Ensembl chr13:73,723,329...73,746,788 		JBrowse link
positive regulation of isotype switching term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Exosc3 exosome component 3 acts_upstream_of_or_within ISO (PMID:21255825) RGD PMID:21255825 NCBI chr 5:59,573,849...59,579,065
Ensembl chr 5:59,573,886...59,579,060 		JBrowse link
G Exosc6 exosome component 6 acts_upstream_of_or_within ISO (PMID:21255825) RGD PMID:21255825 NCBI chr19:39,022,171...39,023,585
Ensembl chr19:39,022,183...39,023,515 		JBrowse link
G Hmces 5-hydroxymethylcytosine binding, ES cell specific involved_in ISS
ISO		 GO_REF:0000024
(PMID:31806351)		 UniProt
RGD		 PMID:31806351 GO_REF:0000024 NCBI chr 4:120,392,812...120,415,616
Ensembl chr 4:120,366,542...120,415,616 		JBrowse link
G Kmt5b lysine methyltransferase 5B involved_in ISS
ISO		 GO_REF:0000024
(PMID:28114273)		 UniProt
RGD		 PMID:28114273 GO_REF:0000024 NCBI chr 1:201,000,444...201,049,819
Ensembl chr 1:201,000,444...201,049,819 		JBrowse link
G Kmt5c lysine methyltransferase 5C involved_in ISS
ISO		 GO_REF:0000024
(PMID:28114273)		 UniProt
RGD		 PMID:28114273 GO_REF:0000024 NCBI chr 1:78,128,325...78,135,931
Ensembl chr 1:69,099,539...69,107,145 		JBrowse link
G Mad2l2 mitotic arrest deficient 2 like 2 involved_in ISO (PMID:29656893) RGD PMID:29656893 NCBI chr 5:158,563,545...158,576,698
Ensembl chr 5:158,563,567...158,576,693 		JBrowse link
G Paxip1 PAX interacting protein 1 involved_in ISO (PMID:20671152) RGD PMID:20671152 NCBI chr 4:7,525,132...7,576,659
Ensembl chr 4:7,525,004...7,576,548 		JBrowse link
G Rif1 replication timing regulatory factor 1 involved_in ISO (PMID:23306439), (PMID:23333305), (PMID:23333306) RGD PMID:23306439 PMID:23333305 PMID:23333306 NCBI chr 3:36,554,689...36,607,961
Ensembl chr 3:36,554,697...36,603,617 		JBrowse link
G Shld1 shieldin complex subunit 1 involved_in ISO
IBA		 (PMID:29656893)
GO_REF:0000033		 RGD
GO_Central		 PMID:29656893 GO_REF:0000033 NCBI chr 3:119,938,695...120,011,068
Ensembl chr 3:119,938,833...120,009,550 		JBrowse link
G Shld2 shieldin complex subunit 2 involved_in ISO (PMID:29656893) RGD PMID:29656893 NCBI chr16:9,554,921...9,646,186
Ensembl chr16:9,548,660...9,639,965 		JBrowse link
G Shld3 shieldin complex subunit 3 involved_in ISO
IBA		 (PMID:29656893)
GO_REF:0000033		 RGD
GO_Central		 PMID:29656893 GO_REF:0000033 NCBI chr 2:35,297,255...35,302,071
Ensembl chr 2:35,295,859...35,302,346 		JBrowse link
G Tfrc transferrin receptor involved_in ISS
ISO		 GO_REF:0000024
(PMID:26642240)		 UniProt
RGD		 PMID:26642240 GO_REF:0000024 NCBI chr11:81,668,478...81,690,318
Ensembl chr11:68,163,413...68,185,257 		JBrowse link
G Tp53bp1 tumor protein p53 binding protein 1 involved_in ISO (PMID:23345425), (PMID:23760478)
(PMID:15077110), (PMID:15159415)		 RGD PMID:15077110 PMID:15159415 PMID:23345425 PMID:23760478 NCBI chr 3:128,620,320...128,724,716
Ensembl chr 3:108,169,980...108,269,822 		JBrowse link
positive regulation of isotype switching to IgA isotypes term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Mlh1 mutL homolog 1 involved_in IEA
ISO		 GO_REF:0000107
(PMID:10430621)		 Ensembl
RGD		 PMID:10430621 GO_REF:0000107 NCBI chr 8:120,074,871...120,112,109
Ensembl chr 8:111,196,468...111,233,617 		JBrowse link
G Msh2 mutS homolog 2 involved_in IEA
ISO		 GO_REF:0000107
(PMID:10430621)		 Ensembl
RGD		 PMID:10430621 GO_REF:0000107 NCBI chr 6:12,567,368...12,626,534
Ensembl chr 6:6,813,795...6,872,938 		JBrowse link
G Nsd2 nuclear receptor binding SET domain protein 2 acts_upstream_of_or_within ISO (PMID:23241889) RGD PMID:23241889 NCBI chr14:76,833,179...76,911,304
Ensembl chr14:76,835,637...76,913,641 		JBrowse link
G Pms2 PMS1 homolog 2, mismatch repair system component involved_in ISO UniProtKB:Q9JK91 (PMID:10430621) RGD PMID:10430621 NCBI chr12:15,790,478...15,814,790
Ensembl chr12:10,676,764...10,701,066 		JBrowse link
G Tgfb1 transforming growth factor, beta 1 involved_in
acts_upstream_of_or_within		 ISS
ISO		 GO_REF:0000024
(PMID:14988498)		 AgBase
RGD		 PMID:14988498 GO_REF:0000024 NCBI chr 1:90,324,312...90,340,627
Ensembl chr 1:81,196,532...81,212,847 		JBrowse link
G Tnfsf13 TNF superfamily member 13 acts_upstream_of_or_within
involved_in		 ISO
IBA		 (PMID:14988498)
MGI:3038886 (PMID:14988498)
GO_REF:0000033		 RGD
GO_Central		 PMID:14988498 GO_REF:0000033 NCBI chr10:54,898,805...54,901,815
Ensembl chr10:54,400,065...54,403,042 		JBrowse link
positive regulation of isotype switching to IgE isotypes term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Clcf1 cardiotrophin-like cytokine factor 1 involved_in ISO (PMID:12023368) RGD PMID:12023368 NCBI chr 1:201,507,763...201,517,607
Ensembl chr 1:201,507,859...201,517,605 		JBrowse link
G Il4 interleukin 4 acts_upstream_of_or_within ISO (PMID:14988498) RGD PMID:14988498 NCBI chr10:38,272,003...38,277,549
Ensembl chr10:37,771,203...37,776,750 		JBrowse link
G Stat6 signal transducer and activator of transcription 6 acts_upstream_of_or_within ISO MGI:107187 (PMID:10490661) RGD PMID:10490661 NCBI chr 7:63,480,229...63,497,551
Ensembl chr 7:63,479,642...63,498,495 		JBrowse link
positive regulation of isotype switching to IgG isotypes term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Atad5 ATPase family, AAA domain containing 5 acts_upstream_of_or_within ISO MGI:4127920 (PMID:25404367) RGD PMID:25404367 NCBI chr10:65,568,569...65,616,379
Ensembl chr10:65,070,689...65,117,845 		JBrowse link
G Cd28 Cd28 molecule acts_upstream_of_or_within ISO MGI:1857150 (PMID:7688139) RGD PMID:7688139 NCBI chr 9:69,660,316...69,689,192
Ensembl chr 9:62,166,192...62,194,685 		JBrowse link
G Cd40 CD40 molecule acts_upstream_of_or_within ISO (PMID:12882831) RGD PMID:12882831 NCBI chr 3:174,209,113...174,224,592
Ensembl chr 3:153,790,449...153,805,534 		JBrowse link
G Ifng interferon gamma acts_upstream_of_or_within ISO (PMID:12882831) RGD PMID:12882831 NCBI chr 7:55,789,180...55,793,216
Ensembl chr 7:53,903,337...53,907,375 		JBrowse link
G Il2 interleukin 2 acts_upstream_of_or_within ISO MGI:1857191 (PMID:1830926) RGD PMID:1830926 NCBI chr 2:121,932,968...121,937,672
Ensembl chr 2:120,004,862...120,009,566 		JBrowse link
G Il4 interleukin 4 acts_upstream_of_or_within ISO (PMID:12882831), (PMID:14988498) RGD PMID:12882831 PMID:14988498 NCBI chr10:38,272,003...38,277,549
Ensembl chr10:37,771,203...37,776,750 		JBrowse link
G Mlh1 mutL homolog 1 involved_in IEA
ISO		 GO_REF:0000107
(PMID:10430621)		 Ensembl
RGD		 PMID:10430621 GO_REF:0000107 NCBI chr 8:120,074,871...120,112,109
Ensembl chr 8:111,196,468...111,233,617 		JBrowse link
G Msh2 mutS homolog 2 involved_in IEA
ISO		 GO_REF:0000107
(PMID:10430621)		 Ensembl
RGD		 PMID:10430621 GO_REF:0000107 NCBI chr 6:12,567,368...12,626,534
Ensembl chr 6:6,813,795...6,872,938 		JBrowse link
G Pagr1 Paxip1-associated glutamate-rich protein 1 involved_in ISO (PMID:26744420) RGD PMID:26744420 NCBI chr 1:181,622,698...181,625,024 JBrowse link
G Paxip1 PAX interacting protein 1 involved_in ISO (PMID:26744420) RGD PMID:26744420 NCBI chr 4:7,525,132...7,576,659
Ensembl chr 4:7,525,004...7,576,548 		JBrowse link
G Pms2 PMS1 homolog 2, mismatch repair system component involved_in ISO UniProtKB:Q9JK91 (PMID:10430621) RGD PMID:10430621 NCBI chr12:15,790,478...15,814,790
Ensembl chr12:10,676,764...10,701,066 		JBrowse link
G Ptprc protein tyrosine phosphatase, receptor type, C acts_upstream_of_or_within ISO MGI:2181288 (PMID:9015183) RGD PMID:9015183 NCBI chr13:52,147,717...52,259,810
Ensembl chr13:49,596,193...49,708,692 		JBrowse link
G Tbx21 T-box transcription factor 21 acts_upstream_of_or_within ISO MGI:2180194 (PMID:12882831) RGD PMID:12882831 NCBI chr10:82,578,751...82,595,253
Ensembl chr10:82,082,322...82,098,831 		JBrowse link
positive regulation of meiotic DNA double-strand break formation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ankrd31 ankyrin repeat domain 31 involved_in ISO (PMID:31000436), (PMID:31003867) RGD PMID:31000436 PMID:31003867 NCBI chr 2:29,793,882...29,987,621
Ensembl chr 2:28,092,882...28,241,719 		JBrowse link
positive regulation of mismatch repair term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Hdac10 histone deacetylase 10 involved_in ISS
IEA
ISO		 GO_REF:0000024
GO_REF:0000107
(PMID:26221039)		 UniProt
Ensembl
RGD		 PMID:26221039 GO_REF:0000024 GO_REF:0000107 NCBI chr 7:122,078,768...122,084,457
Ensembl chr 7:120,199,129...120,204,228 		JBrowse link
G Hmgb1 high mobility group box 1 involved_in ISO (PMID:15014079) RGD PMID:15014079 NCBI chr12:11,009,236...11,015,941
Ensembl chr12:5,901,586...5,978,565
Ensembl chr16:5,901,586...5,978,565 		JBrowse link
G Prkcg protein kinase C, gamma involved_in ISO (PMID:15808853) RGD PMID:15808853 NCBI chr 1:74,748,272...74,777,611
Ensembl chr 1:65,832,855...65,859,384 		JBrowse link
positive regulation of mitochondrial DNA replication term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Endog endonuclease G involved_in ISO (PMID:29719607) RGD PMID:29719607 NCBI chr 3:13,449,113...13,451,715
Ensembl chr 3:13,449,086...13,451,932 		JBrowse link
G Mtnap1 mitochondrial nucleoid associated protein 1 involved_in ISO (PMID:37676315) RGD PMID:37676315 NCBI chr10:98,728,661...98,738,693
Ensembl chr10:98,727,763...98,738,691 		JBrowse link
G Ssbp1 single stranded DNA binding protein 1 involved_in ISO
IBA
IEA
ISS		 (PMID:31550240)
GO_REF:0000033
GO_REF:0000107
GO_REF:0000024		 RGD
GO_Central
Ensembl
UniProt		 PMID:31550240 GO_REF:0000024 GO_REF:0000033 GO_REF:0000107 NCBI chr 4:69,266,024...69,276,135
Ensembl chr 4:69,266,102...69,276,135 		JBrowse link
positive regulation of mitotic cell cycle DNA replication term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Fgfr1 Fibroblast growth factor receptor 1 acts_upstream_of_or_within ISO (PMID:2161540) RGD PMID:2161540 NCBI chr16:73,194,631...73,249,855
Ensembl chr16:66,494,042...66,547,350 		JBrowse link
positive regulation of mitotic recombination term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ercc2 ERCC excision repair 2, TFIIH core complex helicase subunit involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr 1:88,161,342...88,175,102
Ensembl chr 1:79,033,326...79,047,102 		JBrowse link
positive regulation of nuclear cell cycle DNA replication term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Atrx ATRX, chromatin remodeler involved_in ISS
ISO
IEA		 GO_REF:0000024
(PMID:24651726)
GO_REF:0000107		 UniProt
RGD
Ensembl		 PMID:24651726 GO_REF:0000024 GO_REF:0000107 NCBI chr  X:70,850,981...70,997,330
Ensembl chr  X:70,850,981...70,997,330 		JBrowse link
G Cdc7 cell division cycle 7 involved_in ISO (PMID:15668232) RGD PMID:15668232 NCBI chr14:2,804,660...2,824,796
Ensembl chr14:2,804,661...2,824,778 		JBrowse link
G Dbf4 DBF4-CDC7 kinase regulatory subunit involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr 4:25,676,570...25,701,152
Ensembl chr 4:25,676,634...25,701,066 		JBrowse link
G Dbf4b DBF4B-CDC7 kinase regulatory subunit involved_in ISO (PMID:15668232) RGD PMID:15668232 NCBI chr10:88,209,913...88,219,336 JBrowse link
G Ino80 INO80 complex ATPase subunit involved_in ISO (PMID:20237820) RGD PMID:20237820 NCBI chr 3:106,368,455...106,465,716
Ensembl chr 3:106,368,455...106,467,911 		JBrowse link
G Wiz WIZ zinc finger involved_in ISO (PMID:23545495) RGD PMID:23545495 NCBI chr 7:11,366,837...11,395,279
Ensembl chr 7:11,367,035...11,395,490 		JBrowse link
positive regulation of reciprocal meiotic recombination term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Prdm9 PR/SET domain 9 acts_upstream_of_or_within
involved_in		 ISO
IBA		 (PMID:21750151)
(PMID:20044538), (PMID:22028627)
GO_REF:0000033		 RGD
GO_Central		 PMID:20044538 PMID:21750151 PMID:22028627 GO_REF:0000033 NCBI chr 1:65,178,666...65,198,851
Ensembl chr 1:56,505,579...56,525,652 		JBrowse link
G Rad51ap1 RAD51 associated protein 1 involved_in ISO (PMID:17996711) RGD PMID:17996711 NCBI chr 4:159,759,454...159,772,473
Ensembl chr 4:159,759,459...159,772,524 		JBrowse link
G Ube2b ubiquitin-conjugating enzyme E2B acts_upstream_of_or_within ISO MGI:2183933 (PMID:12556476) RGD PMID:12556476 NCBI chr10:36,248,434...36,263,379
Ensembl chr10:36,248,438...36,264,665 		JBrowse link
positive regulation of single strand break repair term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Parp1 poly (ADP-ribose) polymerase 1 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr13:94,839,484...94,871,295
Ensembl chr13:92,307,586...92,339,404 		JBrowse link
G Whr1 winged helix repair factor 1 involved_in ISO (PMID:38252411) RGD PMID:38252411 NCBI chr20:3,995,590...4,005,117
Ensembl chr20:3,995,587...4,005,116 		JBrowse link
positive regulation of strand invasion term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Wrn WRN RecQ like helicase involved_in ISO (PMID:26420422) RGD PMID:26420422 NCBI chr16:65,466,552...65,602,951
Ensembl chr16:58,763,504...58,895,450 		JBrowse link
positive regulation of t-circle formation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ercc1 ERCC excision repair 1, endonuclease non-catalytic subunit involved_in ISO (PMID:22579284) RGD PMID:22579284 NCBI chr 1:88,099,308...88,135,966
Ensembl chr 1:78,996,390...79,007,963 		JBrowse link
G Slx1b SLX1 homolog B, structure-specific endonuclease subunit involved_in ISO (PMID:22579284) RGD PMID:22579284 NCBI chr 1:181,286,190...181,291,739
Ensembl chr 1:181,283,921...181,291,775 		JBrowse link
G Slx4 SLX4 structure-specific endonuclease subunit involved_in ISO (PMID:22579284) RGD PMID:22579284 NCBI chr10:11,526,623...11,549,313
Ensembl chr10:11,528,424...11,549,295 		JBrowse link
positive regulation of telomere capping term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ankrd66 ankyrin repeat domain 66 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr 9:17,421,432...17,441,212
Ensembl chr 9:17,411,983...17,442,647 		JBrowse link
G Hnrnpd heterogeneous nuclear ribonucleoprotein D acts_upstream_of ISO (PMID:22633954) RGD PMID:22633954 NCBI chr14:9,615,375...9,638,975
Ensembl chr14:9,615,479...9,633,786 		JBrowse link
G Nabp2 nucleic acid binding protein 2 involved_in ISO
IEA		 (PMID:25589350)
GO_REF:0000107		 RGD
Ensembl		 PMID:25589350 GO_REF:0000107 NCBI chr 7:830,949...836,551
Ensembl chr 7:830,949...838,027 		JBrowse link
G Rtel1 regulator of telomere elongation helicase 1 involved_in ISO (PMID:23959892) RGD PMID:23959892 NCBI chr 3:168,427,247...168,465,349
Ensembl chr 3:168,419,579...168,465,348 		JBrowse link
G Tnks tankyrase involved_in IBA
ISO		 GO_REF:0000033
(PMID:25939383)		 GO_Central
RGD		 PMID:25939383 GO_REF:0000033 NCBI chr16:57,223,174...57,370,740
Ensembl chr16:57,225,094...57,366,260 		JBrowse link
G Tnks2 tankyrase 2 involved_in IBA
ISO		 GO_REF:0000033
(PMID:25939383)		 GO_Central
RGD		 PMID:25939383 GO_REF:0000033 NCBI chr 1:234,567,888...234,621,079
Ensembl chr 1:234,567,858...234,621,079 		JBrowse link
positive regulation of telomere maintenance term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Atrx ATRX, chromatin remodeler involved_in ISS
ISO
IEA		 GO_REF:0000024
(PMID:20110566)
GO_REF:0000107		 UniProt
RGD
Ensembl		 PMID:20110566 GO_REF:0000024 GO_REF:0000107 NCBI chr  X:70,850,981...70,997,330
Ensembl chr  X:70,850,981...70,997,330 		JBrowse link
G Aurkb aurora kinase B involved_in
acts_upstream_of_or_within		 IEA
ISO		 GO_REF:0000107
(PMID:21531765)		 Ensembl
RGD		 PMID:21531765 GO_REF:0000107 NCBI chr10:54,243,116...54,249,675
Ensembl chr10:53,745,142...53,750,837 		JBrowse link
G Dhx36 DEAH-box helicase 36 involved_in ISO (PMID:22238380) RGD PMID:22238380 NCBI chr 2:146,856,469...146,894,577
Ensembl chr 2:146,856,469...146,894,572 		JBrowse link
G Gnl3 G protein nucleolar 3 involved_in ISO (PMID:22641345) RGD PMID:22641345 NCBI chr16:6,207,402...6,213,491
Ensembl chr16:6,207,402...6,213,392 		JBrowse link
G Klf4 KLF transcription factor 4 acts_upstream_of ISO (PMID:20629177) RGD PMID:20629177 NCBI chr 5:75,074,107...75,079,182
Ensembl chr 5:70,278,972...70,283,602 		JBrowse link
G Map2k7 mitogen activated protein kinase kinase 7 involved_in
acts_upstream_of_or_within		 IEA
ISO		 GO_REF:0000107
(PMID:21531765)		 Ensembl
RGD		 PMID:21531765 GO_REF:0000107 NCBI chr12:7,389,032...7,398,377
Ensembl chr12:2,591,219...2,604,222 		JBrowse link
G Map3k4 mitogen activated protein kinase kinase kinase 4 acts_upstream_of_or_within ISO (PMID:21531765) RGD PMID:21531765 NCBI chr 1:50,977,870...51,067,117
Ensembl chr 1:48,431,830...48,519,358 		JBrowse link
G Mapk1 mitogen activated protein kinase 1 involved_in
acts_upstream_of_or_within		 IEA
ISO		 GO_REF:0000107
(PMID:21531765)		 Ensembl
RGD		 PMID:21531765 GO_REF:0000107 NCBI chr11:97,462,025...97,529,193
Ensembl chr11:83,957,813...84,023,616 		JBrowse link
G Mapk15 mitogen-activated protein kinase 15 involved_in
acts_upstream_of		 IEA
ISO		 GO_REF:0000107
(PMID:21531765)		 Ensembl
RGD		 PMID:21531765 GO_REF:0000107 NCBI chr 7:109,575,619...109,595,339
Ensembl chr 7:107,694,964...107,714,645 		JBrowse link
G Mapk3 mitogen activated protein kinase 3 acts_upstream_of_or_within ISO (PMID:21531765) RGD PMID:21531765 NCBI chr 1:190,797,189...190,803,411
Ensembl chr 1:181,366,637...181,372,863 		JBrowse link
G Mapkapk5 MAPK activated protein kinase 5 acts_upstream_of ISO (PMID:21531765) RGD PMID:21531765 NCBI chr12:34,993,520...35,013,059
Ensembl chr12:34,994,092...35,013,052 		JBrowse link
G Mre11 MRE11 homolog, double strand break repair nuclease involved_in ISO
IEA		 (PMID:16374507)
GO_REF:0000107		 RGD
Ensembl		 PMID:16374507 GO_REF:0000107 NCBI chr 8:19,900,211...19,961,906
Ensembl chr 8:11,632,354...11,678,279 		JBrowse link
G Myc MYC proto-oncogene, bHLH transcription factor involved_in ISO (PMID:9637678) RGD PMID:9637678 NCBI chr 7:95,483,105...95,488,031
Ensembl chr 7:93,593,705...93,598,630 		JBrowse link
G Nbn nibrin involved_in IEA
ISO		 GO_REF:0000107
(PMID:16374507)		 Ensembl
RGD		 PMID:16374507 GO_REF:0000107 NCBI chr 5:34,256,678...34,291,163
Ensembl chr 5:29,459,457...29,494,150 		JBrowse link
G Nek2 NIMA-related kinase 2 acts_upstream_of_or_within ISO (PMID:21531765) RGD PMID:21531765 NCBI chr13:103,405,818...103,419,063
Ensembl chr13:103,405,819...103,419,051 		JBrowse link
G Nek7 NIMA-related kinase 7 involved_in
acts_upstream_of_or_within		 IEA
ISO		 GO_REF:0000107
(PMID:21531765)		 Ensembl
RGD		 PMID:21531765 GO_REF:0000107 NCBI chr13:50,022,212...50,149,374
Ensembl chr13:50,022,218...50,149,296 		JBrowse link
G Nvl nuclear VCP-like acts_upstream_of ISO (PMID:22226966) RGD PMID:22226966 NCBI chr13:92,851,023...92,906,749
Ensembl chr13:92,853,650...92,906,049 		JBrowse link
G Pkib cAMP-dependent protein kinase inhibitor beta involved_in
acts_upstream_of		 IEA
ISO		 GO_REF:0000107
(PMID:21531765)		 Ensembl
RGD		 PMID:21531765 GO_REF:0000107 NCBI chr20:36,965,172...37,062,190
Ensembl chr20:36,905,340...37,062,187 		JBrowse link
G Pml PML nuclear body scaffold involved_in ISO (PMID:26119943)
(PMID:22641345)		 RGD PMID:22641345 PMID:26119943 NCBI chr 8:67,523,164...67,557,801
Ensembl chr 8:58,628,837...58,658,971 		JBrowse link
G Pnkp polynucleotide kinase 3'-phosphatase acts_upstream_of_or_within ISO (PMID:21531765) RGD PMID:21531765 NCBI chr 1:95,341,465...95,346,921
Ensembl chr 1:95,341,620...95,346,920 		JBrowse link
G Ppp1r10 protein phosphatase 1, regulatory subunit 10 involved_in ISO (PMID:23426265) RGD PMID:23426265 NCBI chr20:2,822,995...2,838,125
Ensembl chr20:2,822,995...2,837,611 		JBrowse link
G Prkcq protein kinase C, theta involved_in
acts_upstream_of_or_within		 IEA
ISO		 GO_REF:0000107
(PMID:21531765)		 Ensembl
RGD		 PMID:21531765 GO_REF:0000107 NCBI chr17:72,156,215...72,288,508
Ensembl chr17:67,246,394...67,378,704 		JBrowse link
G Rad50 RAD50 double strand break repair protein involved_in ISO
IEA		 (PMID:16374507)
GO_REF:0000107		 RGD
Ensembl		 PMID:16374507 GO_REF:0000107 NCBI chr10:38,310,147...38,362,100
Ensembl chr10:37,808,726...37,861,396 		JBrowse link
G Rtel1 regulator of telomere elongation helicase 1 involved_in ISO (PMID:22579284) RGD PMID:22579284 NCBI chr 3:168,427,247...168,465,349
Ensembl chr 3:168,419,579...168,465,348 		JBrowse link
G Sirt6 sirtuin 6 involved_in ISO (PMID:23201774), (PMID:25819580) RGD PMID:23201774 PMID:25819580 NCBI chr 7:8,082,312...8,087,776
Ensembl chr 7:8,082,364...8,098,914 		JBrowse link
G Slx4 SLX4 structure-specific endonuclease subunit involved_in ISO (PMID:24012755) RGD PMID:24012755 NCBI chr10:11,526,623...11,549,313
Ensembl chr10:11,528,424...11,549,295 		JBrowse link
G Terf2 telomeric repeat binding factor 2 involved_in
acts_upstream_of_or_within		 ISO (PMID:24012755)
MGI:3619525 (PMID:15968270)		 RGD PMID:15968270 PMID:24012755 NCBI chr19:34,976,963...35,005,813
Ensembl chr19:34,977,471...35,005,819 		JBrowse link
positive regulation of telomere maintenance in response to DNA damage term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Actl6a actin-like 6A involved_in ISO (PMID:23979016) RGD PMID:23979016 NCBI chr 2:117,413,206...117,436,758
Ensembl chr 2:115,492,285...115,508,401 		JBrowse link
G Actr5 actin related protein 5 involved_in ISO (PMID:23979016) RGD PMID:23979016 NCBI chr 3:147,282,461...147,295,870
Ensembl chr 3:147,282,624...147,296,110 		JBrowse link
G Actr8 actin related protein 8 involved_in ISO (PMID:23979016) RGD PMID:23979016 NCBI chr16:5,164,131...5,186,353
Ensembl chr16:5,164,129...5,178,577 		JBrowse link
G Ino80 INO80 complex ATPase subunit involved_in ISO (PMID:23979016) RGD PMID:23979016 NCBI chr 3:106,368,455...106,465,716
Ensembl chr 3:106,368,455...106,467,911 		JBrowse link
G Ino80b INO80 complex subunit B involved_in ISO (PMID:23979016) RGD PMID:23979016 NCBI chr 4:115,627,907...115,631,069
Ensembl chr 4:115,627,908...115,631,456 		JBrowse link
G Ino80c INO80 complex subunit C involved_in ISO (PMID:23979016) RGD PMID:23979016 NCBI chr18:15,378,764...15,398,574
Ensembl chr18:15,378,770...15,393,403 		JBrowse link
G Ino80d INO80 complex subunit D involved_in ISO (PMID:23979016) RGD PMID:23979016 NCBI chr 9:64,447,075...64,514,013
Ensembl chr 9:64,457,165...64,515,242 		JBrowse link
G Mcrs1 microspherule protein 1 involved_in ISO (PMID:23979016) RGD PMID:23979016 NCBI chr 7:130,383,853...130,392,667
Ensembl chr 7:130,383,853...130,392,685 		JBrowse link
G Nfrkb nuclear factor related to kappa B binding protein involved_in ISO (PMID:23979016) RGD PMID:23979016 NCBI chr 8:29,831,802...29,863,360
Ensembl chr 8:29,831,812...29,863,359 		JBrowse link
G Ruvbl1 RuvB-like AAA ATPase 1 involved_in ISO (PMID:23979016) RGD PMID:23979016 NCBI chr 4:120,932,486...120,967,400
Ensembl chr 4:120,932,417...121,029,384 		JBrowse link
G Ruvbl2 RuvB-like AAA ATPase 2 involved_in ISO (PMID:23979016) RGD PMID:23979016 NCBI chr 1:95,902,014...95,915,247
Ensembl chr 1:95,901,701...95,915,342 		JBrowse link
G Tfpt TCF3 fusion partner involved_in IEA
ISO		 GO_REF:0000107
(PMID:23979016)		 Ensembl
RGD		 PMID:23979016 GO_REF:0000107 NCBI chr 1:65,587,633...65,597,407
Ensembl chr 1:65,582,359...65,611,689 		JBrowse link
G Uchl5 ubiquitin C-terminal hydrolase L5 involved_in ISO (PMID:23979016) RGD PMID:23979016 NCBI chr13:58,070,947...58,106,825
Ensembl chr13:55,520,729...55,556,502 		JBrowse link
G Yy1 YY1 transcription factor involved_in ISO (PMID:23979016) RGD PMID:23979016 NCBI chr 6:133,471,615...133,500,875
Ensembl chr 6:127,707,596...127,732,747 		JBrowse link
positive regulation of telomere maintenance via telomerase term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Atm ATM serine/threonine kinase involved_in ISO (PMID:26586427) RGD PMID:26586427 NCBI chr 8:62,724,939...62,829,040
Ensembl chr 8:53,831,093...53,932,437 		JBrowse link
G Atr ATR serine/threonine kinase involved_in ISO (PMID:26586427) RGD PMID:26586427 NCBI chr 8:96,426,704...96,524,152
Ensembl chr 8:96,426,724...96,524,136 		JBrowse link
G Cct2 chaperonin containing TCP1 subunit 2 involved_in
acts_upstream_of		 IEA
ISO		 GO_REF:0000107
(PMID:25467444)		 Ensembl
RGD		 PMID:25467444 GO_REF:0000107 NCBI chr 7:52,692,725...52,705,478
Ensembl chr 7:52,692,725...52,706,944 		JBrowse link
G Cct3 chaperonin containing TCP1 subunit 3 acts_upstream_of ISO (PMID:25467444) RGD PMID:25467444 NCBI chr 2:173,765,701...173,790,353
Ensembl chr 2:173,765,698...173,790,757 		JBrowse link
G Cct4 chaperonin containing TCP1 subunit 4 acts_upstream_of ISO (PMID:25467444) RGD PMID:25467444 NCBI chr14:96,991,853...97,004,732
Ensembl chr14:96,991,859...97,005,267 		JBrowse link
G Cct5 chaperonin containing TCP1 subunit 5 acts_upstream_of ISO (PMID:25467444) RGD PMID:25467444 NCBI chr 2:82,591,750...82,602,903
Ensembl chr 2:82,590,630...82,602,930 		JBrowse link
G Cct6a chaperonin containing TCP1 subunit 6A acts_upstream_of ISO (PMID:25467444) RGD PMID:25467444 NCBI chr12:26,872,736...26,883,125
Ensembl chr12:26,872,574...26,883,337 		JBrowse link
G Cct7 chaperonin containing TCP1 subunit 7 acts_upstream_of ISO (PMID:25467444) RGD PMID:25467444 NCBI chr 4:117,989,232...118,006,478
Ensembl chr 4:117,989,232...118,006,580 		JBrowse link
G Cct8 chaperonin containing TCP1 subunit 8 acts_upstream_of ISO (PMID:25467444) RGD PMID:25467444 NCBI chr11:26,710,370...26,722,079
Ensembl chr11:26,710,370...26,722,079 		JBrowse link
G Ctnnb1 catenin beta 1 involved_in
acts_upstream_of		 IEA
ISO		 GO_REF:0000107
(PMID:22723415)		 Ensembl
RGD		 PMID:22723415 GO_REF:0000107 NCBI chr 8:129,517,576...129,544,661
Ensembl chr 8:120,639,995...120,667,111 		JBrowse link
G Dkc1 dyskerin pseudouridine synthase 1 acts_upstream_of_or_within ISO MGI:3849598 (PMID:15240872)
(PMID:23685356), (PMID:25467444)		 RGD PMID:15240872 PMID:23685356 PMID:25467444
G Fbxo4 F-box protein 4 involved_in ISO (PMID:16275645) RGD PMID:16275645 NCBI chr 2:53,174,798...53,187,792
Ensembl chr 2:53,174,798...53,187,792 		JBrowse link
G Gch1 GTP cyclohydrolase 1 IMP RGD PMID:30690003 RGD:401717569 NCBI chr15:22,884,006...22,917,412
Ensembl chr15:20,402,527...20,437,698 		JBrowse link
G Hnrnpa1 heterogeneous nuclear ribonucleoprotein A1 involved_in ISO
IEA		 (PMID:23935072)
GO_REF:0000107		 RGD
Ensembl		 PMID:23935072 GO_REF:0000107 NCBI chr 7:134,375,318...134,381,610
Ensembl chr 7:134,375,150...134,381,609 		JBrowse link
G Hnrnpd heterogeneous nuclear ribonucleoprotein D acts_upstream_of ISO (PMID:22633954) RGD PMID:22633954 NCBI chr14:9,615,375...9,638,975
Ensembl chr14:9,615,479...9,633,786 		JBrowse link
G Naf1 nuclear assembly factor 1 ribonucleoprotein acts_upstream_of ISO (PMID:27510903) RGD PMID:27510903 NCBI chr16:22,837,583...22,868,320
Ensembl chr16:22,837,588...22,868,293 		JBrowse link
G Parn poly(A)-specific ribonuclease involved_in ISO (PMID:26482878), (PMID:26950371) RGD PMID:26482878 PMID:26950371 NCBI chr10:1,410,636...1,548,573
Ensembl chr10:1,410,642...1,548,560 		JBrowse link
G Pot1 protection of telomeres 1 involved_in ISO (PMID:12768206), (PMID:12781132), (PMID:17237768) RGD PMID:12768206 PMID:12781132 PMID:17237768 NCBI chr 4:55,170,821...55,228,588
Ensembl chr 4:54,205,332...54,263,042 		JBrowse link
G Ptges3 prostaglandin E synthase 3 involved_in ISO
IEA		 (PMID:19740745)
GO_REF:0000107		 RGD
Ensembl		 PMID:19740745 GO_REF:0000107 NCBI chr 7:490,698...507,759
Ensembl chr 7:490,656...508,084 		JBrowse link
G Tcp1 t-complex 1 acts_upstream_of ISO (PMID:25467444) RGD PMID:25467444 NCBI chr 1:47,829,061...47,836,809
Ensembl chr 1:47,828,652...47,836,839 		JBrowse link
G Terc telomerase RNA component acts_upstream_of_or_within ISO MGI:1857930 (PMID:17982445) RGD PMID:17982445 NCBI chr 2:114,744,148...114,744,535 JBrowse link
G Tnks tankyrase involved_in ISO (PMID:11739745), (PMID:12782650), (PMID:18221737) RGD PMID:11739745 PMID:12782650 PMID:18221737 NCBI chr16:57,223,174...57,370,740
Ensembl chr16:57,225,094...57,366,260 		JBrowse link
G Wrap53 WD repeat containing, antisense to TP53 acts_upstream_of ISO (PMID:23685356) RGD PMID:23685356 NCBI chr10:54,780,873...54,797,919
Ensembl chr10:54,282,105...54,298,929 		JBrowse link
positive regulation of telomere maintenance via telomere lengthening term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Atm ATM serine/threonine kinase involved_in ISO (PMID:17694070), (PMID:26586427) RGD PMID:17694070 PMID:26586427 NCBI chr 8:62,724,939...62,829,040
Ensembl chr 8:53,831,093...53,932,437 		JBrowse link
G Dhx36 DEAH-box helicase 36 involved_in ISO (PMID:21149580) RGD PMID:21149580 NCBI chr 2:146,856,469...146,894,577
Ensembl chr 2:146,856,469...146,894,572 		JBrowse link
G Hnrnpa2b1 heterogeneous nuclear ribonucleoprotein A2/B1 involved_in IDA PMID:23184978 BHF-UCL PMID:23184978 RGD:11567256 NCBI chr 4:81,867,354...81,875,886
Ensembl chr 4:80,534,651...80,545,249 		JBrowse link
G Naf1 nuclear assembly factor 1 ribonucleoprotein acts_upstream_of ISO (PMID:27510903) RGD PMID:27510903 NCBI chr16:22,837,583...22,868,320
Ensembl chr16:22,837,588...22,868,293 		JBrowse link
G Rtel1 regulator of telomere elongation helicase 1 involved_in ISO (PMID:23959892) RGD PMID:23959892 NCBI chr 3:168,427,247...168,465,349
Ensembl chr 3:168,419,579...168,465,348 		JBrowse link
G Tnks tankyrase involved_in ISO (PMID:12782650) RGD PMID:12782650 NCBI chr16:57,223,174...57,370,740
Ensembl chr16:57,225,094...57,366,260 		JBrowse link
positive regulation of telomeric D-loop disassembly term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Pot1 protection of telomeres 1 involved_in ISO (PMID:16030011) RGD PMID:16030011 NCBI chr 4:55,170,821...55,228,588
Ensembl chr 4:54,205,332...54,263,042 		JBrowse link
positive regulation of telomeric loop disassembly term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Rtel1 regulator of telomere elongation helicase 1 involved_in ISO (PMID:22579284) RGD PMID:22579284 NCBI chr 3:168,427,247...168,465,349
Ensembl chr 3:168,419,579...168,465,348 		JBrowse link
postreplication repair term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Aktip AKT interacting protein involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr19:15,866,811...15,877,123
Ensembl chr19:15,866,928...15,886,663 		JBrowse link
G Brca1 BRCA1, DNA repair associated involved_in ISO
IEA		 (PMID:17349954)
GO_REF:0000107		 RGD
Ensembl		 PMID:17349954 GO_REF:0000107 NCBI chr10:86,917,693...86,978,012
Ensembl chr10:86,418,000...86,477,304 		JBrowse link
G Msh2 mutS homolog 2 involved_in
acts_upstream_of_or_within		 IEA
ISO
ISS		 GO_REF:0000107
MGI:1858055 (PMID:7628020)
GO_REF:0000024
(PMID:7923193)		 Ensembl
RGD
UniProt		 PMID:7628020 PMID:7923193 GO_REF:0000024 GO_REF:0000107 NCBI chr 6:12,567,368...12,626,534
Ensembl chr 6:6,813,795...6,872,938 		JBrowse link
G Polh DNA polymerase eta acts_upstream_of_or_within ISO (PMID:10871396) RGD PMID:10871396 NCBI chr 9:14,778,355...14,813,210
Ensembl chr 9:14,777,888...14,812,723 		JBrowse link
G Rad18 RAD18 E3 ubiquitin protein ligase involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr 4:145,735,654...145,821,102
Ensembl chr 4:145,735,654...145,821,069 		JBrowse link
G Ube2b ubiquitin-conjugating enzyme E2B involved_in ISO
IEA		 (PMID:14981545)
GO_REF:0000107		 RGD
Ensembl		 PMID:14981545 GO_REF:0000107 NCBI chr10:36,248,434...36,263,379
Ensembl chr10:36,248,438...36,264,665 		JBrowse link
G Ube2n ubiquitin-conjugating enzyme E2N involved_in
acts_upstream_of		 IBA
ISO		 GO_REF:0000033
(PMID:17349954)		 GO_Central
RGD		 PMID:17349954 GO_REF:0000033 NCBI chr 7:32,041,190...32,071,252
Ensembl chr 7:30,154,616...30,184,355 		JBrowse link
G Ube2v1 ubiquitin conjugating enzyme E2 V1 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr 3:156,317,339...156,340,198
Ensembl chr 3:156,316,781...156,340,273 		JBrowse link
G Ube2v1-ps22 ubiquitin conjugating enzyme E2 V1, pseudogene 22 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr 9:33,633,770...33,634,238 JBrowse link
G Ube2v1l1 ubiquitin conjugating enzyme E2 V1 like 1 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr14:4,703,243...4,704,962
Ensembl chr 3:156,316,781...156,340,273 		JBrowse link
G Ube2v2 ubiquitin conjugating enzyme E2 V2 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr11:85,304,528...85,338,430
Ensembl chr11:85,304,526...85,336,369 		JBrowse link
protection from non-homologous end joining at telomere term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Acd ACD, shelterin complex subunit and telomerase recruitment factor involved_in IEA
ISO		 GO_REF:0000107
(PMID:18185984)		 Ensembl
RGD		 PMID:18185984 GO_REF:0000107 NCBI chr19:33,586,739...33,589,481
Ensembl chr19:33,586,745...33,589,461 		JBrowse link
G Dclre1b DNA cross-link repair 1B involved_in IEA
ISO
ISS		 GO_REF:0000107
(PMID:20551906), (PMID:20619712)
GO_REF:0000024
(PMID:16730175), (PMID:20479256)		 Ensembl
RGD
UniProt		 PMID:16730175 PMID:20479256 PMID:20551906 PMID:20619712 GO_REF:0000024 GO_REF:0000107 NCBI chr 2:191,309,909...191,318,399
Ensembl chr 2:191,309,913...191,318,423 		JBrowse link
G Nbn nibrin involved_in IEA
ISO
ISS		 GO_REF:0000107
(PMID:28216226)
GO_REF:0000024		 Ensembl
RGD
UniProt		 PMID:28216226 GO_REF:0000024 GO_REF:0000107 NCBI chr 5:34,256,678...34,291,163
Ensembl chr 5:29,459,457...29,494,150 		JBrowse link
G Pot1b protection of telomeres 1B involved_in IEA GO_REF:0000107 Ensembl GO_REF:0000107 NCBI chr 9:9,670,355...9,728,624
Ensembl chr 9:9,670,362...9,728,532 		JBrowse link
G Terf2 telomeric repeat binding factor 2 involved_in
acts_upstream_of_or_within		 ISO
IBA		 ComplexPortal:CPX-1993 (PMID:14690602), (PMID:17499040), (PMID:24095731)
(PMID:20619712), (PMID:24120135)
MGI:3619525 (PMID:15968270)
GO_REF:0000033		 RGD
GO_Central		 PMID:14690602 PMID:15968270 PMID:17499040 PMID:20619712 PMID:24095731 More... GO_REF:0000033 NCBI chr19:34,976,963...35,005,813
Ensembl chr19:34,977,471...35,005,819 		JBrowse link
G Terf2ip TERF2 interacting protein NOT|involved_in ISS
ISO
IBA		 GO_REF:0000024
(PMID:20339076), (PMID:20622869)
GO_REF:0000033		 UniProt
RGD
GO_Central		 PMID:20339076 PMID:20622869 GO_REF:0000024 GO_REF:0000033 NCBI chr19:39,976,965...39,984,055
Ensembl chr19:39,976,906...39,984,064 		JBrowse link
protein-DNA covalent cross-linking repair term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Brip1 BRCA1 interacting DNA helicase 1 involved_in ISO (PMID:36608669) RGD PMID:36608669 NCBI chr10:71,402,035...71,528,083
Ensembl chr10:70,907,371...71,030,324 		JBrowse link
G Fam111a FAM111 trypsin like peptidase A involved_in ISO (PMID:32165630) RGD PMID:32165630 NCBI chr 1:209,640,865...209,656,551
Ensembl chr 1:209,640,953...209,656,547 		JBrowse link
G Hmces 5-hydroxymethylcytosine binding, ES cell specific involved_in ISS
ISO		 GO_REF:0000024
(PMID:37519246), (PMID:37950866)		 UniProt
RGD		 PMID:37519246 PMID:37950866 GO_REF:0000024 NCBI chr 4:120,392,812...120,415,616
Ensembl chr 4:120,366,542...120,415,616 		JBrowse link
G Sprtn SprT-like N-terminal domain involved_in ISS
ISO
IEA		 GO_REF:0000024
(PMID:28199696)
(PMID:27852435), (PMID:27871365), (PMID:27871366), (PMID:32152270), (PMID:32649882), (PMID:36608669)
GO_REF:0000107		 UniProt
RGD
Ensembl		 PMID:27852435 PMID:27871365 PMID:27871366 PMID:28199696 PMID:32152270 More... GO_REF:0000024 GO_REF:0000107 NCBI chr19:52,857,612...52,864,864
Ensembl chr19:52,857,866...52,864,864 		JBrowse link
G Tex264 testis expressed 264 involved_in ISO
IBA		 (PMID:32152270)
GO_REF:0000033		 RGD
GO_Central		 PMID:32152270 GO_REF:0000033 NCBI chr 8:116,174,517...116,201,578
Ensembl chr 8:107,295,806...107,323,232 		JBrowse link
G Vcp valosin-containing protein involved_in ISO
ISS		 (PMID:32152270)
GO_REF:0000024		 RGD
UniProt		 PMID:32152270 GO_REF:0000024 NCBI chr 5:62,005,984...62,025,387
Ensembl chr 5:57,210,168...57,229,571 		JBrowse link
G Vcpip1 valosin containing protein interacting protein 1 involved_in ISO
IBA
ISS		 (PMID:32649882)
GO_REF:0000033
GO_REF:0000024		 RGD
GO_Central
UniProt		 PMID:32649882 GO_REF:0000024 GO_REF:0000033 NCBI chr 5:9,534,247...9,560,889
Ensembl chr 5:9,534,129...9,562,040 		JBrowse link
pyrimidine dimer repair term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ddb2 damage specific DNA binding protein 2 acts_upstream_of_or_within ISO MGI:3511965 (PMID:15558025) RGD PMID:15558025 NCBI chr 3:97,640,923...97,667,617
Ensembl chr 3:77,185,109...77,207,631 		JBrowse link
G Ercc6 ERCC excision repair 6, chromatin remodeling factor acts_upstream_of_or_within ISO MGI:1932102 (PMID:9150142) RGD PMID:9150142 NCBI chr16:7,771,311...7,841,895
Ensembl chr16:7,765,013...7,835,587 		JBrowse link
G Polb DNA polymerase beta IDA RGD PMID:12388548 RGD:633643 NCBI chr16:69,379,438...69,402,710
Ensembl chr16:69,379,400...69,404,812 		JBrowse link
G Polh DNA polymerase eta acts_upstream_of_or_within ISO (PMID:10871396) RGD PMID:10871396 NCBI chr 9:14,778,355...14,813,210
Ensembl chr 9:14,777,888...14,812,723 		JBrowse link
pyrimidine dimer repair by nucleotide-excision repair term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ercc1 ERCC excision repair 1, endonuclease non-catalytic subunit acts_upstream_of_or_within ISO (PMID:10454634) RGD PMID:10454634 NCBI chr 1:88,099,308...88,135,966
Ensembl chr 1:78,996,390...79,007,963 		JBrowse link
G Hmgn1 high mobility group nucleosome binding domain 1 acts_upstream_of_or_within ISO MGI:3590648 (PMID:12660172) RGD PMID:12660172 NCBI chr11:35,422,328...35,428,247
Ensembl chr11:35,422,328...35,428,254 		JBrowse link
G Sirt1 sirtuin 1 involved_in ISO
IEA		 (PMID:21149730)
GO_REF:0000107		 RGD
Ensembl		 PMID:21149730 GO_REF:0000107 NCBI chr20:25,305,953...25,328,000
Ensembl chr20:25,306,917...25,329,260 		JBrowse link
G Xpc XPC complex subunit, DNA damage recognition and repair factor acts_upstream_of_or_within ISO MGI:1931883 (PMID:17049932) RGD PMID:17049932 NCBI chr 4:125,550,833...125,578,084
Ensembl chr 4:123,993,666...124,021,010 		JBrowse link
reciprocal meiotic recombination term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Brme1 break repair meiotic recombinase recruitment factor 1 involved_in ISO (PMID:32345962) RGD PMID:32345962 NCBI chr19:23,990,049...24,011,774
Ensembl chr19:23,990,045...24,011,850 		JBrowse link
G C14h1orf146 similar to human chromosome 1 open reading frame 146 involved_in IBA
ISO		 GO_REF:0000033
(PMID:30746471)		 GO_Central
RGD		 PMID:30746471 GO_REF:0000033 NCBI chr14:2,230,404...2,250,420
Ensembl chr14:2,231,451...2,270,782 		JBrowse link
G Ccnb1ip1 cyclin B1 interacting protein 1 involved_in IBA
ISO		 GO_REF:0000033
(PMID:24390283)		 GO_Central
RGD		 PMID:24390283 GO_REF:0000033 NCBI chr15:24,014,905...24,031,357
Ensembl chr15:24,014,908...24,028,475 		JBrowse link
G Cep63 centrosomal protein 63 acts_upstream_of_or_within ISO MGI:4377328 (PMID:26158450) RGD PMID:26158450 NCBI chr 8:103,162,639...103,214,177
Ensembl chr 8:103,162,700...103,214,177 		JBrowse link
G Chtf18 chromosome transmission fidelity factor 18 acts_upstream_of_or_within ISO MGI:2177588 (PMID:23133398) RGD PMID:23133398 NCBI chr10:14,743,006...14,751,044
Ensembl chr10:14,742,621...14,751,050 		JBrowse link
G Cntd1 cyclin N-terminal domain containing 1 acts_upstream_of_or_within ISO MGI:4363686 (PMID:24891606) RGD PMID:24891606 NCBI chr10:86,221,430...86,231,812 JBrowse link
G Dmc1 DNA meiotic recombinase 1 involved_in ISO
IBA		 (PMID:21307306)
(PMID:17639081)
GO_REF:0000033		 RGD
GO_Central		 PMID:17639081 PMID:21307306 GO_REF:0000033 NCBI chr 7:111,124,888...111,167,465
Ensembl chr 7:111,124,888...111,167,952 		JBrowse link
G Mlh1 mutL homolog 1 acts_upstream_of_or_within ISO MGI:1857946 (PMID:10385520), (PMID:16307920), (PMID:8673133) RGD PMID:8673133 PMID:10385520 PMID:16307920 NCBI chr 8:120,074,871...120,112,109
Ensembl chr 8:111,196,468...111,233,617 		JBrowse link
G Mnd1 meiotic nuclear divisions 1 involved_in ISO
IBA		 (PMID:16407260)
GO_REF:0000033		 RGD
GO_Central		 PMID:16407260 GO_REF:0000033 NCBI chr 2:169,433,523...169,496,081
Ensembl chr 2:169,433,540...169,496,096 		JBrowse link
G Msh4 mutS homolog 4 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr 2:245,445,118...245,504,493
Ensembl chr 2:242,792,661...242,843,487 		JBrowse link
G Psmc3ip PSMC3 interacting protein involved_in ISO
IEA		 (PMID:16407260)
GO_REF:0000107		 RGD
Ensembl		 PMID:16407260 GO_REF:0000107 NCBI chr10:86,024,281...86,027,928
Ensembl chr10:86,023,950...86,027,423 		JBrowse link
G Rad50 RAD50 double strand break repair protein TAS RGD PMID:10908350 RGD:68816 NCBI chr10:38,310,147...38,362,100
Ensembl chr10:37,808,726...37,861,396 		JBrowse link
G Rad51 RAD51 recombinase involved_in ISO (PMID:15834424) RGD PMID:15834424 NCBI chr 3:126,554,210...126,578,888
Ensembl chr 3:106,100,381...106,125,035 		JBrowse link
G Rad51c RAD51 paralog C acts_upstream_of_or_within
involved_in		 ISO
IBA		 MGI:3707422|MGI:3707425 (PMID:17312021)
GO_REF:0000033		 RGD
GO_Central		 PMID:17312021 GO_REF:0000033 NCBI chr10:72,702,299...72,728,980
Ensembl chr10:72,205,032...72,231,248 		JBrowse link
G RFFL ring finger and FYVE like domain containing E3 ubiquitin protein ligase involved_in IBA GO_Central GO_REF:0000033
G Rnf212 ring finger protein 212 involved_in ISO (PMID:23396135), (PMID:24390283) RGD PMID:23396135 PMID:24390283 NCBI chr14:949,397...988,377
Ensembl chr14:949,448...987,831 		JBrowse link
G Shoc1 shortage in chiasmata 1 involved_in ISO (PMID:30272023) RGD PMID:30272023 NCBI chr 5:73,864,423...73,956,487
Ensembl chr 5:73,866,334...73,956,444 		JBrowse link
G Spo11 SPO11 initiator of meiotic double strand breaks involved_in
acts_upstream_of_or_within		 IBA
ISO		 GO_REF:0000033
MGI:2178805 (PMID:16307920)		 GO_Central
RGD		 PMID:16307920 GO_REF:0000033 NCBI chr 3:161,755,299...161,770,930
Ensembl chr 3:161,757,519...161,770,925 		JBrowse link
G Syce3 synaptonemal complex central element protein 3 involved_in IBA
ISO		 GO_REF:0000033
(PMID:21637789)		 GO_Central
RGD		 PMID:21637789 GO_REF:0000033 NCBI chr 7:120,456,800...120,482,882
Ensembl chr 7:120,456,800...120,482,973 		JBrowse link
G Sycp1 synaptonemal complex protein 1 involved_in ISS
ISO		 GO_REF:0000024
(PMID:15937223)		 UniProt
RGD		 PMID:15937223 GO_REF:0000024 NCBI chr 2:190,296,688...190,456,687
Ensembl chr 2:190,296,954...190,456,737 		JBrowse link
G Tex11 testis expressed 11 involved_in IBA
ISO		 GO_REF:0000033
(PMID:18369460)		 GO_Central
RGD		 PMID:18369460 GO_REF:0000033 NCBI chr  X:65,932,904...66,196,525
Ensembl chr  X:65,932,988...66,196,187 		JBrowse link
G Tex19.1 testis expressed 19.1 involved_in ISS GO_REF:0000024 UniProt GO_REF:0000024 NCBI chr10:106,420,245...106,422,452
Ensembl chr10:106,420,139...106,422,425 		JBrowse link
G Top6bl TOP6B like initiator of meiotic double strand breaks involved_in ISO
IBA		 (PMID:26917764)
GO_REF:0000033		 RGD
GO_Central		 PMID:26917764 GO_REF:0000033 NCBI chr 1:211,331,973...211,419,015 JBrowse link
G Trip13 thyroid hormone receptor interactor 13 involved_in
acts_upstream_of_or_within		 ISS
IBA
ISO
IEA		 GO_REF:0000024
GO_REF:0000033
(PMID:20711356)
MGI:3719273 (PMID:17696610)
GO_REF:0000104		 UniProt
GO_Central
RGD		 PMID:17696610 PMID:20711356 GO_REF:0000024 GO_REF:0000033 GO_REF:0000104 NCBI chr 1:29,357,093...29,402,078
Ensembl chr 1:29,357,130...29,402,074 		JBrowse link
G Ubr2 ubiquitin protein ligase E3 component n-recognin 2 involved_in ISO (PMID:28708824) RGD PMID:28708824 NCBI chr 9:13,982,427...14,062,315
Ensembl chr 9:13,982,329...14,062,139 		JBrowse link
recombinational interstrand cross-link repair term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Mcm8 minichromosome maintenance 8 homologous recombination repair factor involved_in ISO (PMID:23401855) RGD PMID:23401855 NCBI chr 3:120,086,741...120,117,008
Ensembl chr 3:120,086,763...120,117,008 		JBrowse link
G Mcm9 minichromosome maintenance 9 homologous recombination repair factor involved_in ISO
IEA		 (PMID:23401855)
GO_REF:0000107		 RGD
Ensembl		 PMID:23401855 GO_REF:0000107 NCBI chr20:32,818,219...32,929,577
Ensembl chr20:32,844,951...32,929,600 		JBrowse link
recombinational repair term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Hrob homologous recombination factor with OB-fold involved_in IEA GO_REF:0000002 InterPro GO_REF:0000002 NCBI chr10:87,705,846...87,722,635
Ensembl chr10:87,206,049...87,222,483 		JBrowse link
G Rhno1 RAD9-HUS1-RAD1 interacting nuclear orphan 1 involved_in ISO
IBA		 (PMID:21659603)
GO_REF:0000033		 RGD
GO_Central		 PMID:21659603 GO_REF:0000033 NCBI chr 4:161,634,047...161,639,437
Ensembl chr 4:161,634,048...161,639,371 		JBrowse link
G Zgrf1 zinc finger, GRF-type containing 1 involved_in ISO (PMID:32640219) RGD PMID:32640219 NCBI chr 2:216,012,911...216,075,608
Ensembl chr 2:216,013,005...216,074,750 		JBrowse link
regulation of apoptotic DNA fragmentation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Aifm1 apoptosis inducing factor, mitochondria associated 1 acts_upstream_of_or_within ISO MGI:1306796 (PMID:15703386) RGD PMID:15703386 NCBI chr  X:132,528,107...132,567,237
Ensembl chr  X:127,650,226...127,689,256 		JBrowse link
G Apaf1 apoptotic peptidase activating factor 1 acts_upstream_of_or_within ISO MGI:1349414 (PMID:15703386) RGD PMID:15703386 NCBI chr 7:27,381,392...27,466,772
Ensembl chr 7:25,494,609...25,579,540 		JBrowse link
G Cidea cell death-inducing DFFA-like effector a involved_in ISO (PMID:9564035) RGD PMID:9564035 NCBI chr18:60,894,917...60,920,485
Ensembl chr18:60,894,874...60,920,481 		JBrowse link
regulation of base-excision repair term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Parp1 poly (ADP-ribose) polymerase 1 involved_in ISO (PMID:34102106) RGD PMID:34102106 NCBI chr13:94,839,484...94,871,295
Ensembl chr13:92,307,586...92,339,404 		JBrowse link
regulation of DNA biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Cdkn1a cyclin-dependent kinase inhibitor 1A acts_upstream_of_or_within ISO MGI:1933751 (PMID:11981756) RGD PMID:11981756 NCBI chr20:7,150,820...7,161,373
Ensembl chr20:7,149,217...7,159,585 		JBrowse link
G Ing4 inhibitor of growth family, member 4 involved_in ISO (PMID:16387653) RGD PMID:16387653 NCBI chr 4:157,841,882...157,850,519
Ensembl chr 4:157,841,951...157,850,265 		JBrowse link
G Ing5 inhibitor of growth family, member 5 involved_in ISO (PMID:16387653) RGD PMID:16387653 NCBI chr 9:94,326,549...94,343,392
Ensembl chr 9:94,326,548...94,344,220 		JBrowse link
G Jade1 jade family PHD finger 1 involved_in ISO (PMID:16387653) RGD PMID:16387653 NCBI chr 2:124,543,233...124,596,361
Ensembl chr 2:124,543,286...124,596,354 		JBrowse link
G Jade2 jade family PHD finger 2 involved_in ISO (PMID:16387653) RGD PMID:16387653 NCBI chr10:36,576,187...36,625,129
Ensembl chr10:36,078,917...36,116,984 		JBrowse link
G Jade3 jade family PHD finger 3 involved_in ISO (PMID:16387653) RGD PMID:16387653 NCBI chr  X:4,222,369...4,424,164
Ensembl chr  X:1,669,930...1,845,138 		JBrowse link
G Kat7 lysine acetyltransferase 7 involved_in ISO (PMID:16387653) RGD PMID:16387653 NCBI chr10:80,718,335...80,752,387
Ensembl chr10:80,221,524...80,255,567 		JBrowse link
G Meaf6 MYST/Esa1-associated factor 6 involved_in ISO (PMID:16387653) RGD PMID:16387653 NCBI chr 5:137,344,681...137,369,703
Ensembl chr 5:137,344,380...137,370,014 		JBrowse link
G Pdgfa platelet derived growth factor subunit A NOT|involved_in ISO
ISS		 (PMID:11788434), (PMID:19019919)
GO_REF:0000024		 RGD
UniProt		 PMID:11788434 PMID:19019919 GO_REF:0000024 NCBI chr12:20,759,366...20,780,337
Ensembl chr12:15,645,541...15,666,497 		JBrowse link
G Sh2b1 SH2B adaptor protein 1 involved_in IEA
ISO		 GO_REF:0000107
(PMID:10644978)		 Ensembl
RGD		 PMID:10644978 GO_REF:0000107 NCBI chr 1:181,048,622...181,057,036
Ensembl chr 1:181,048,623...181,056,579 		JBrowse link
G Tfdp1 transcription factor Dp-1 acts_upstream_of_or_within ISO (PMID:15448153) RGD PMID:15448153 NCBI chr16:82,864,220...82,903,166
Ensembl chr16:76,162,043...76,200,817 		JBrowse link
G Tom1l1 target of myb1 like 1 membrane trafficking protein NOT|involved_in ISO (PMID:16479011) RGD PMID:16479011 NCBI chr10:75,961,653...76,005,725
Ensembl chr10:75,464,577...75,508,250 		JBrowse link
regulation of DNA double-strand break processing term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Helb DNA helicase B involved_in ISO (PMID:26774285) RGD PMID:26774285 NCBI chr 7:55,588,510...55,615,979
Ensembl chr 7:55,588,798...55,615,585 		JBrowse link
regulation of DNA endoreduplication term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Senp2 SUMO specific peptidase 2 acts_upstream_of_or_within
involved_in		 ISO
IEA		 MGI:3832730 (PMID:19090619)
GO_REF:0000107		 RGD
Ensembl		 PMID:19090619 GO_REF:0000107 NCBI chr11:78,981,429...79,018,274
Ensembl chr11:78,981,432...79,018,238 		JBrowse link
regulation of DNA recombination term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Smarcad1 SNF2 related chromatin remodeling ATPase with DExD box 1 involved_in ISO (PMID:11031099) RGD PMID:11031099 NCBI chr 4:95,639,722...95,709,055
Ensembl chr 4:94,311,489...94,372,563 		JBrowse link
regulation of DNA repair term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Actl6a actin-like 6A involved_in ISO (PMID:23979016) RGD PMID:23979016 NCBI chr 2:117,413,206...117,436,758
Ensembl chr 2:115,492,285...115,508,401 		JBrowse link
G Actr5 actin related protein 5 involved_in ISO (PMID:23979016) RGD PMID:23979016 NCBI chr 3:147,282,461...147,295,870
Ensembl chr 3:147,282,624...147,296,110 		JBrowse link
G Actr8 actin related protein 8 involved_in ISO (PMID:23979016) RGD PMID:23979016 NCBI chr16:5,164,131...5,186,353
Ensembl chr16:5,164,129...5,178,577 		JBrowse link
G Cdk9 cyclin-dependent kinase 9 involved_in ISO
IEA		 (PMID:20493174)
GO_REF:0000107		 RGD
Ensembl		 PMID:20493174 GO_REF:0000107 NCBI chr 3:36,394,168...36,399,016
Ensembl chr 3:15,996,468...16,002,410 		JBrowse link
G Ier3 immediate early response 3 acts_upstream_of_or_within ISO MGI:3773690 (PMID:20467439) RGD PMID:20467439 NCBI chr20:2,928,378...2,929,582
Ensembl chr20:2,928,378...2,929,583 		JBrowse link
G Ino80 INO80 complex ATPase subunit involved_in ISO (PMID:23979016) RGD PMID:23979016 NCBI chr 3:106,368,455...106,465,716
Ensembl chr 3:106,368,455...106,467,911 		JBrowse link
G Ino80b INO80 complex subunit B involved_in ISO (PMID:23979016) RGD PMID:23979016 NCBI chr 4:115,627,907...115,631,069
Ensembl chr 4:115,627,908...115,631,456 		JBrowse link
G Ino80c INO80 complex subunit C involved_in ISO (PMID:23979016) RGD PMID:23979016 NCBI chr18:15,378,764...15,398,574
Ensembl chr18:15,378,770...15,393,403 		JBrowse link
G Ino80d INO80 complex subunit D involved_in ISO (PMID:23979016) RGD PMID:23979016 NCBI chr 9:64,447,075...64,514,013
Ensembl chr 9:64,457,165...64,515,242 		JBrowse link
G Mcrs1 microspherule protein 1 involved_in ISO (PMID:23979016) RGD PMID:23979016 NCBI chr 7:130,383,853...130,392,667
Ensembl chr 7:130,383,853...130,392,685 		JBrowse link
G Nfrkb nuclear factor related to kappa B binding protein involved_in ISO (PMID:23979016) RGD PMID:23979016 NCBI chr 8:29,831,802...29,863,360
Ensembl chr 8:29,831,812...29,863,359 		JBrowse link
G Parg poly (ADP-ribose) glycohydrolase involved_in IEA
IBA		 GO_REF:0000002
GO_REF:0000033		 InterPro
GO_Central		 GO_REF:0000002 GO_REF:0000033 NCBI chr16:7,436,429...7,544,276
Ensembl chr16:7,436,476...7,544,273 		JBrowse link
G Phf13 PHD finger protein 13 involved_in ISO (PMID:23034801) RGD PMID:23034801 NCBI chr 5:162,494,574...162,501,350
Ensembl chr 5:162,494,573...162,501,350 		JBrowse link
G Radx RPA1 related single stranded DNA binding protein, X-linked involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr  X:103,089,284...103,176,840
Ensembl chr  X:103,089,284...103,176,838 		JBrowse link
G Riox1 ribosomal oxygenase 1 involved_in ISO (PMID:35210392) RGD PMID:35210392 NCBI chr 6:103,579,642...103,582,260
Ensembl chr 6:103,579,642...103,582,250 		JBrowse link
G Ruvbl1 RuvB-like AAA ATPase 1 involved_in ISO (PMID:23979016) RGD PMID:23979016 NCBI chr 4:120,932,486...120,967,400
Ensembl chr 4:120,932,417...121,029,384 		JBrowse link
G Ruvbl2 RuvB-like AAA ATPase 2 involved_in ISO (PMID:23979016) RGD PMID:23979016 NCBI chr 1:95,902,014...95,915,247
Ensembl chr 1:95,901,701...95,915,342 		JBrowse link
G Setd7 SET domain containing 7, histone lysine methyltransferase involved_in ISO (PMID:35210392) RGD PMID:35210392 NCBI chr 2:135,562,683...135,605,468
Ensembl chr 2:135,562,683...135,605,468 		JBrowse link
G Sgf29 SAGA complex associated factor 29 involved_in IEA
ISO		 GO_REF:0000107
(PMID:35210392)		 Ensembl
RGD		 PMID:35210392 GO_REF:0000107 NCBI chr 1:190,668,803...190,702,500
Ensembl chr 1:181,238,468...181,274,781 		JBrowse link
G Sirt7 sirtuin 7 involved_in ISO (PMID:30944854) RGD PMID:30944854 NCBI chr10:106,394,802...106,401,627
Ensembl chr10:105,896,476...105,903,172 		JBrowse link
G Suv39h1 SUV39H1 histone lysine methyltransferase acts_upstream_of_or_within ISO MGI:2445449 (PMID:23695662) RGD PMID:23695662 NCBI chr  X:17,093,059...17,105,942
Ensembl chr  X:14,421,109...14,433,982 		JBrowse link
G Suv39h1-ps1 SUV39H1 histone lysine methyltransferase, pseudogene 1 acts_upstream_of_or_within ISO MGI:2445449 (PMID:23695662) RGD PMID:23695662 NCBI chr  X:146,828,818...146,831,485 JBrowse link
G Tfpt TCF3 fusion partner involved_in ISO (PMID:23979016) RGD PMID:23979016 NCBI chr 1:65,587,633...65,597,407
Ensembl chr 1:65,582,359...65,611,689 		JBrowse link
G Uchl5 ubiquitin C-terminal hydrolase L5 involved_in ISO (PMID:23979016) RGD PMID:23979016 NCBI chr13:58,070,947...58,106,825
Ensembl chr13:55,520,729...55,556,502 		JBrowse link
G Usp1 ubiquitin specific peptidase 1 involved_in ISO
ISS		 (PMID:18082604)
GO_REF:0000024		 RGD
UniProt		 PMID:18082604 GO_REF:0000024 NCBI chr 5:113,587,564...113,598,934
Ensembl chr 5:113,587,564...113,598,932 		JBrowse link
G Yy1 YY1 transcription factor involved_in ISO (PMID:23979016) RGD PMID:23979016 NCBI chr 6:133,471,615...133,500,875
Ensembl chr 6:127,707,596...127,732,747 		JBrowse link
regulation of DNA replication term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Actl6a actin-like 6A involved_in ISO (PMID:25016522) RGD PMID:25016522 NCBI chr 2:117,413,206...117,436,758
Ensembl chr 2:115,492,285...115,508,401 		JBrowse link
G Actr5 actin related protein 5 involved_in ISO (PMID:25016522) RGD PMID:25016522 NCBI chr 3:147,282,461...147,295,870
Ensembl chr 3:147,282,624...147,296,110 		JBrowse link
G Actr8 actin related protein 8 involved_in ISO (PMID:25016522) RGD PMID:25016522 NCBI chr16:5,164,131...5,186,353
Ensembl chr16:5,164,129...5,178,577 		JBrowse link
G Ankrd17 ankyrin repeat domain 17 involved_in ISO (PMID:19150984) RGD PMID:19150984 NCBI chr14:17,723,239...17,861,841
Ensembl chr14:17,721,932...17,862,617 		JBrowse link
G Baz1a bromodomain adjacent to zinc finger domain, 1A involved_in ISO (PMID:12434153) RGD PMID:12434153 NCBI chr 6:72,389,701...72,512,516
Ensembl chr 6:72,389,703...72,512,459 		JBrowse link
G Ccna2 cyclin A2 involved_in ISO (PMID:17234884) RGD PMID:17234884 NCBI chr 2:121,355,363...121,361,762
Ensembl chr 2:119,426,089...119,433,577 		JBrowse link
G Chrac1 chromatin accessibility complex subunit 1 involved_in ISO (PMID:12434153) RGD PMID:12434153 NCBI chr 7:105,013,047...105,016,435
Ensembl chr 7:105,013,015...105,017,136 		JBrowse link
G Dscc1 DNA replication and sister chromatid cohesion 1 involved_in ISO (PMID:19907496) RGD PMID:19907496 NCBI chr 7:86,482,588...86,498,212
Ensembl chr 7:86,482,588...86,498,212 		JBrowse link
G Ehmt2 euchromatic histone lysine methyltransferase 2 involved_in ISO (PMID:22387026) RGD PMID:22387026 NCBI chr20:3,924,263...3,941,238
Ensembl chr20:3,919,624...3,941,547 		JBrowse link
G Esco1 establishment of sister chromatid cohesion N-acetyltransferase 1 involved_in ISO (PMID:19907496) RGD PMID:19907496 NCBI chr18:1,630,560...1,686,803
Ensembl chr18:1,631,954...1,686,942 		JBrowse link
G Esco2 establishment of sister chromatid cohesion N-acetyltransferase 2 involved_in ISO (PMID:19907496) RGD PMID:19907496 NCBI chr15:44,210,124...44,230,785
Ensembl chr15:40,034,568...40,055,306
Ensembl chr15:40,034,568...40,055,306 		JBrowse link
G Fbxo5 F-box protein 5 involved_in ISO (PMID:17234884), (PMID:17485488) RGD PMID:17234884 PMID:17485488 NCBI chr 1:42,196,068...42,202,437
Ensembl chr 1:42,196,068...42,202,437 		JBrowse link
G Gmnn geminin, DNA replication inhibitor involved_in ISO (PMID:17234884) RGD PMID:17234884 NCBI chr17:40,301,771...40,310,054
Ensembl chr17:40,301,808...40,310,054 		JBrowse link
G Id3 inhibitor of DNA binding 3 IMP RGD PMID:15966691 RGD:1549434 NCBI chr 5:153,656,253...153,657,860
Ensembl chr 5:148,372,762...148,374,349 		JBrowse link
G Ing5 inhibitor of growth family, member 5 involved_in ISO (PMID:16387653) RGD PMID:16387653 NCBI chr 9:94,326,549...94,343,392
Ensembl chr 9:94,326,548...94,344,220 		JBrowse link
G Ino80 INO80 complex ATPase subunit involved_in ISO (PMID:25016522) RGD PMID:25016522 NCBI chr 3:106,368,455...106,465,716
Ensembl chr 3:106,368,455...106,467,911 		JBrowse link
G Ino80b INO80 complex subunit B involved_in ISO (PMID:25016522) RGD PMID:25016522 NCBI chr 4:115,627,907...115,631,069
Ensembl chr 4:115,627,908...115,631,456 		JBrowse link
G Ino80c INO80 complex subunit C involved_in ISO (PMID:25016522) RGD PMID:25016522 NCBI chr18:15,378,764...15,398,574
Ensembl chr18:15,378,770...15,393,403 		JBrowse link
G Ino80d INO80 complex subunit D involved_in ISO (PMID:25016522) RGD PMID:25016522 NCBI chr 9:64,447,075...64,514,013
Ensembl chr 9:64,457,165...64,515,242 		JBrowse link
G Ino80e INO80 complex subunit E involved_in ISO (PMID:25016522) RGD PMID:25016522 NCBI chr 1:181,461,406...181,472,059
Ensembl chr 1:181,461,408...181,472,469 		JBrowse link
G Jade1 jade family PHD finger 1 involved_in ISO (PMID:16387653) RGD PMID:16387653 NCBI chr 2:124,543,233...124,596,361
Ensembl chr 2:124,543,286...124,596,354 		JBrowse link
G Jade2 jade family PHD finger 2 involved_in ISO (PMID:16387653) RGD PMID:16387653 NCBI chr10:36,576,187...36,625,129
Ensembl chr10:36,078,917...36,116,984 		JBrowse link
G Jade3 jade family PHD finger 3 involved_in ISO (PMID:16387653) RGD PMID:16387653 NCBI chr  X:4,222,369...4,424,164
Ensembl chr  X:1,669,930...1,845,138 		JBrowse link
G Kat7 lysine acetyltransferase 7 involved_in ISO (PMID:16387653) RGD PMID:16387653 NCBI chr10:80,718,335...80,752,387
Ensembl chr10:80,221,524...80,255,567 		JBrowse link
G Mcrs1 microspherule protein 1 involved_in ISO (PMID:25016522) RGD PMID:25016522 NCBI chr 7:130,383,853...130,392,667
Ensembl chr 7:130,383,853...130,392,685 		JBrowse link
G Meaf6 MYST/Esa1-associated factor 6 involved_in ISO (PMID:16387653) RGD PMID:16387653 NCBI chr 5:137,344,681...137,369,703
Ensembl chr 5:137,344,380...137,370,014 		JBrowse link
G Nfrkb nuclear factor related to kappa B binding protein involved_in ISO (PMID:25016522) RGD PMID:25016522 NCBI chr 8:29,831,802...29,863,360
Ensembl chr 8:29,831,812...29,863,359 		JBrowse link
G Nucks1 nuclear casein kinase and cyclin-dependent kinase substrate 1 involved_in ISO (PMID:26323318) RGD PMID:26323318 NCBI chr13:43,345,091...43,374,316
Ensembl chr13:43,345,115...43,370,229 		JBrowse link
G Obi1 ORC ubiquitin ligase 1 involved_in ISO (PMID:31160578) RGD PMID:31160578 NCBI chr15:81,269,413...81,308,734
Ensembl chr15:81,269,416...81,308,734 		JBrowse link
G Orc3 origin recognition complex, subunit 3 involved_in ISO
IEA
ISS		 (PMID:31160578)
GO_REF:0000107
GO_REF:0000024		 RGD
Ensembl
UniProt		 PMID:31160578 GO_REF:0000024 GO_REF:0000107 NCBI chr 5:49,123,758...49,181,552
Ensembl chr 5:49,126,955...49,181,633 		JBrowse link
G Orc5 origin recognition complex, subunit 5 involved_in ISO (PMID:31160578) RGD PMID:31160578 NCBI chr 4:12,548,007...12,612,611
Ensembl chr 4:12,548,007...12,612,568 		JBrowse link
G Pole3 DNA polymerase epsilon 3, accessory subunit involved_in ISO (PMID:12434153) RGD PMID:12434153 NCBI chr 5:75,973,941...75,977,175
Ensembl chr 5:75,974,717...75,977,231
Ensembl chr 7:75,974,717...75,977,231 		JBrowse link
G Rbbp6 RB binding protein 6, ubiquitin ligase involved_in ISO (PMID:24726359) RGD PMID:24726359 NCBI chr 1:177,503,988...177,537,397
Ensembl chr 1:177,503,313...177,535,678 		JBrowse link
G Ruvbl1 RuvB-like AAA ATPase 1 involved_in ISO (PMID:25016522) RGD PMID:25016522 NCBI chr 4:120,932,486...120,967,400
Ensembl chr 4:120,932,417...121,029,384 		JBrowse link
G Ruvbl2 RuvB-like AAA ATPase 2 involved_in ISO (PMID:25016522) RGD PMID:25016522 NCBI chr 1:95,902,014...95,915,247
Ensembl chr 1:95,901,701...95,915,342 		JBrowse link
G Smarca5 SNF2 related chromatin remodeling ATPase 5 involved_in ISO (PMID:12434153) RGD PMID:12434153 NCBI chr19:27,271,918...27,304,594
Ensembl chr19:27,271,148...27,304,594 		JBrowse link
G Smc3 structural maintenance of chromosomes 3 involved_in IEA
ISS
ISO		 GO_REF:0000107
GO_REF:0000024
(PMID:19907496)		 Ensembl
UniProt
RGD		 PMID:19907496 GO_REF:0000024 GO_REF:0000107 NCBI chr 1:252,601,422...252,644,522
Ensembl chr 1:252,601,753...252,644,522 		JBrowse link
G Tfpt TCF3 fusion partner involved_in ISO
IEA		 (PMID:25016522)
GO_REF:0000107		 RGD
Ensembl		 PMID:25016522 GO_REF:0000107 NCBI chr 1:65,587,633...65,597,407
Ensembl chr 1:65,582,359...65,611,689 		JBrowse link
G Uchl5 ubiquitin C-terminal hydrolase L5 involved_in ISO (PMID:25016522) RGD PMID:25016522 NCBI chr13:58,070,947...58,106,825
Ensembl chr13:55,520,729...55,556,502 		JBrowse link
G Usp37 ubiquitin specific peptidase 37 involved_in ISO (PMID:27296872) RGD PMID:27296872 NCBI chr 9:76,018,863...76,118,732
Ensembl chr 9:76,018,991...76,084,044 		JBrowse link
G Yy1 YY1 transcription factor involved_in ISO (PMID:25016522) RGD PMID:25016522 NCBI chr 6:133,471,615...133,500,875
Ensembl chr 6:127,707,596...127,732,747 		JBrowse link
G Zbtb38 zinc finger and BTB domain containing 38 involved_in ISO
IEA
ISS		 (PMID:24726359)
GO_REF:0000107
GO_REF:0000024		 RGD
Ensembl
UniProt		 PMID:24726359 GO_REF:0000024 GO_REF:0000107 NCBI chr 8:97,284,617...97,288,518
Ensembl chr 8:97,280,993...97,485,625 		JBrowse link
regulation of DNA strand elongation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Actl6a actin-like 6A involved_in ISO (PMID:25016522) RGD PMID:25016522 NCBI chr 2:117,413,206...117,436,758
Ensembl chr 2:115,492,285...115,508,401 		JBrowse link
G Actr5 actin related protein 5 involved_in ISO (PMID:25016522) RGD PMID:25016522 NCBI chr 3:147,282,461...147,295,870
Ensembl chr 3:147,282,624...147,296,110 		JBrowse link
G Actr8 actin related protein 8 involved_in ISO (PMID:25016522) RGD PMID:25016522 NCBI chr16:5,164,131...5,186,353
Ensembl chr16:5,164,129...5,178,577 		JBrowse link
G Ino80 INO80 complex ATPase subunit involved_in ISO (PMID:25016522) RGD PMID:25016522 NCBI chr 3:106,368,455...106,465,716
Ensembl chr 3:106,368,455...106,467,911 		JBrowse link
G Ino80b INO80 complex subunit B involved_in ISO (PMID:25016522) RGD PMID:25016522 NCBI chr 4:115,627,907...115,631,069
Ensembl chr 4:115,627,908...115,631,456 		JBrowse link
G Ino80c INO80 complex subunit C involved_in ISO (PMID:25016522) RGD PMID:25016522 NCBI chr18:15,378,764...15,398,574
Ensembl chr18:15,378,770...15,393,403 		JBrowse link
G Ino80d INO80 complex subunit D involved_in ISO (PMID:25016522) RGD PMID:25016522 NCBI chr 9:64,447,075...64,514,013
Ensembl chr 9:64,457,165...64,515,242 		JBrowse link
G Ino80e INO80 complex subunit E involved_in ISO (PMID:25016522) RGD PMID:25016522 NCBI chr 1:181,461,406...181,472,059
Ensembl chr 1:181,461,408...181,472,469 		JBrowse link
G Mcrs1 microspherule protein 1 involved_in ISO (PMID:25016522) RGD PMID:25016522 NCBI chr 7:130,383,853...130,392,667
Ensembl chr 7:130,383,853...130,392,685 		JBrowse link
G Nfrkb nuclear factor related to kappa B binding protein involved_in ISO (PMID:25016522) RGD PMID:25016522 NCBI chr 8:29,831,802...29,863,360
Ensembl chr 8:29,831,812...29,863,359 		JBrowse link
G Nucks1 nuclear casein kinase and cyclin-dependent kinase substrate 1 involved_in ISO (PMID:26323318) RGD PMID:26323318 NCBI chr13:43,345,091...43,374,316
Ensembl chr13:43,345,115...43,370,229 		JBrowse link
G Ruvbl1 RuvB-like AAA ATPase 1 involved_in ISO (PMID:25016522) RGD PMID:25016522 NCBI chr 4:120,932,486...120,967,400
Ensembl chr 4:120,932,417...121,029,384 		JBrowse link
G Ruvbl2 RuvB-like AAA ATPase 2 involved_in ISO (PMID:25016522) RGD PMID:25016522 NCBI chr 1:95,902,014...95,915,247
Ensembl chr 1:95,901,701...95,915,342 		JBrowse link
G Tfpt TCF3 fusion partner involved_in ISO
IEA		 (PMID:25016522)
GO_REF:0000107		 RGD
Ensembl		 PMID:25016522 GO_REF:0000107 NCBI chr 1:65,587,633...65,597,407
Ensembl chr 1:65,582,359...65,611,689 		JBrowse link
G Uchl5 ubiquitin C-terminal hydrolase L5 involved_in ISO (PMID:25016522) RGD PMID:25016522 NCBI chr13:58,070,947...58,106,825
Ensembl chr13:55,520,729...55,556,502 		JBrowse link
G Yy1 YY1 transcription factor involved_in ISO (PMID:25016522) RGD PMID:25016522 NCBI chr 6:133,471,615...133,500,875
Ensembl chr 6:127,707,596...127,732,747 		JBrowse link
regulation of DNA strand resection involved in replication fork processing term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Zfp365 zinc finger protein 365 involved_in ISS
IBA
IEA		 GO_REF:0000024
GO_REF:0000033
GO_REF:0000107		 UniProt
GO_Central
Ensembl		 GO_REF:0000024 GO_REF:0000033 GO_REF:0000107 NCBI chr20:20,666,240...20,689,734
Ensembl chr20:20,666,240...20,691,238 		JBrowse link
regulation of DNA-templated DNA replication initiation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Cdt1 chromatin licensing and DNA replication factor 1 involved_in ISO
IBA		 (PMID:11125146)
(PMID:12192004)
GO_REF:0000033		 RGD
GO_Central		 PMID:11125146 PMID:12192004 GO_REF:0000033 NCBI chr19:50,620,713...50,625,659
Ensembl chr19:50,620,713...50,625,659 		JBrowse link
G Gmnc geminin coiled-coil domain containing involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr11:73,836,255...73,847,698
Ensembl chr11:73,814,533...73,847,328 		JBrowse link
G Gmnn geminin, DNA replication inhibitor involved_in ISO
IBA		 (PMID:24064211)
GO_REF:0000033		 RGD
GO_Central		 PMID:24064211 GO_REF:0000033 NCBI chr17:40,301,771...40,310,054
Ensembl chr17:40,301,808...40,310,054 		JBrowse link
G Kat7 lysine acetyltransferase 7 involved_in ISO
ISS		 (PMID:26620551)
GO_REF:0000024		 RGD
UniProt		 PMID:26620551 GO_REF:0000024 NCBI chr10:80,718,335...80,752,387
Ensembl chr10:80,221,524...80,255,567 		JBrowse link
G Mcidas multiciliate differentiation and DNA synthesis associated cell cycle protein involved_in ISO
IBA
IEA		 (PMID:24064211)
GO_REF:0000033
GO_REF:0000107		 RGD
GO_Central
Ensembl		 PMID:24064211 GO_REF:0000033 GO_REF:0000107 NCBI chr 2:44,636,820...44,644,551
Ensembl chr 2:44,636,856...44,642,601 		JBrowse link
G Ticrr TOPBP1-interacting checkpoint and replication regulator involved_in ISO
IBA		 (PMID:20116089)
GO_REF:0000033		 RGD
GO_Central		 PMID:20116089 GO_REF:0000033 NCBI chr 1:133,597,618...133,639,513
Ensembl chr 1:133,597,716...133,639,523 		JBrowse link
G Wrnip1 WRN helicase interacting protein 1 involved_in ISO
IEA
ISS		 (PMID:15670210)
GO_REF:0000107
GO_REF:0000024		 RGD
Ensembl
UniProt		 PMID:15670210 GO_REF:0000024 GO_REF:0000107 NCBI chr17:31,621,410...31,641,659
Ensembl chr17:31,621,411...31,641,659 		JBrowse link
regulation of double-strand break repair term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Dek DEK proto-oncogene acts_upstream_of_or_within
involved_in		 ISO
IBA		 (PMID:21653549)
GO_REF:0000033		 RGD
GO_Central		 PMID:21653549 GO_REF:0000033 NCBI chr17:17,580,804...17,602,825
Ensembl chr17:17,580,843...17,602,808 		JBrowse link
G Pml PML nuclear body scaffold involved_in ISO (PMID:21639834) RGD PMID:21639834 NCBI chr 8:67,523,164...67,557,801
Ensembl chr 8:58,628,837...58,658,971 		JBrowse link
G Ppp4c protein phosphatase 4, catalytic subunit involved_in ISO (PMID:18614045) RGD PMID:18614045 NCBI chr 1:181,392,899...181,399,703
Ensembl chr 1:181,392,923...181,399,659 		JBrowse link
G Ppp4r2 protein phosphatase 4, regulatory subunit 2 involved_in ISO (PMID:18614045) RGD PMID:18614045 NCBI chr 4:133,454,555...133,495,486
Ensembl chr 4:133,454,555...133,495,486 		JBrowse link
G Ppp4r3a protein phosphatase 4, regulatory subunit 3A involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr 6:120,302,508...120,365,907
Ensembl chr 6:120,302,511...120,365,891 		JBrowse link
G Ppp4r3b protein phosphatase 4, regulatory subunit 3B involved_in ISO
IBA		 (PMID:18614045)
GO_REF:0000033		 RGD
GO_Central		 PMID:18614045 GO_REF:0000033 NCBI chr14:102,917,043...102,965,210
Ensembl chr14:102,917,443...103,068,192 		JBrowse link
G Ppp4r3cl1 protein phosphatase 4 regulatory subunit 3C like 1 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr  X:56,396,491...56,399,835
Ensembl chr  X:56,396,804...56,399,326 		JBrowse link
G Ppp4r3cl2 protein phosphatase 4 regulatory subunit 3C like 2 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr  X:54,782,250...54,889,938
Ensembl chr  X:54,782,268...54,889,921 		JBrowse link
G Ppp4r3cl3 protein phosphatase 4 regulatory subunit 3C like 3 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr  X:55,009,116...55,012,319
Ensembl chr  X:55,009,467...55,012,137 		JBrowse link
regulation of double-strand break repair via homologous recombination term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Chek1 checkpoint kinase 1 involved_in ISS
ISO		 GO_REF:0000024
(PMID:15665856)		 UniProt
RGD		 PMID:15665856 GO_REF:0000024 NCBI chr 8:36,420,565...36,443,477
Ensembl chr 8:36,420,569...36,441,009 		JBrowse link
G Fignl1 fidgetin-like 1 involved_in ISO
ISS		 (PMID:23754376)
GO_REF:0000024		 RGD
UniProt		 PMID:23754376 GO_REF:0000024 NCBI chr14:86,368,670...86,381,728
Ensembl chr14:86,368,675...86,377,455 		JBrowse link
G Kdm1a lysine demethylase 1A acts_upstream_of_or_within ISO (PMID:24217620) RGD PMID:24217620 NCBI chr 5:154,066,436...154,121,913
Ensembl chr 5:148,782,976...148,838,319 		JBrowse link
G Ppp4c protein phosphatase 4, catalytic subunit involved_in IEA
ISS
ISO		 GO_REF:0000107
GO_REF:0000024
(PMID:20154705)		 Ensembl
UniProt
RGD		 PMID:20154705 GO_REF:0000024 GO_REF:0000107 NCBI chr 1:181,392,899...181,399,703
Ensembl chr 1:181,392,923...181,399,659 		JBrowse link
G Ppp4r2 protein phosphatase 4, regulatory subunit 2 involved_in ISO (PMID:20154705) RGD PMID:20154705 NCBI chr 4:133,454,555...133,495,486
Ensembl chr 4:133,454,555...133,495,486 		JBrowse link
G Rad51 RAD51 recombinase involved_in ISO (PMID:23754376) RGD PMID:23754376 NCBI chr 3:126,554,210...126,578,888
Ensembl chr 3:106,100,381...106,125,035 		JBrowse link
G Rad51ap1 RAD51 associated protein 1 involved_in ISO (PMID:23754376) RGD PMID:23754376 NCBI chr 4:159,759,454...159,772,473
Ensembl chr 4:159,759,459...159,772,524 		JBrowse link
G Rpa2 replication protein A2 involved_in ISO
ISS		 (PMID:20154705)
GO_REF:0000024		 RGD
UniProt		 PMID:20154705 GO_REF:0000024 NCBI chr 5:144,976,789...144,989,445
Ensembl chr 5:144,976,748...144,987,350 		JBrowse link
G Rtel1 regulator of telomere elongation helicase 1 involved_in ISS
IBA
IEA
ISO		 GO_REF:0000024
GO_REF:0000033
GO_REF:0000104
(PMID:18957201)		 UniProt
GO_Central
RGD		 PMID:18957201 GO_REF:0000024 GO_REF:0000033 GO_REF:0000104 NCBI chr 3:168,427,247...168,465,349
Ensembl chr 3:168,419,579...168,465,348 		JBrowse link
G Setd2 SET domain containing 2, histone lysine methyltransferase involved_in ISO (PMID:24843002) RGD PMID:24843002 NCBI chr 8:119,390,207...119,475,863
Ensembl chr 8:110,511,772...110,597,489 		JBrowse link
G Shld2 shieldin complex subunit 2 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr16:9,554,921...9,646,186
Ensembl chr16:9,548,660...9,639,965 		JBrowse link
G Sirt6 sirtuin 6 involved_in ISO (PMID:19135889), (PMID:22753495) RGD PMID:19135889 PMID:22753495 NCBI chr 7:8,082,312...8,087,776
Ensembl chr 7:8,082,364...8,098,914 		JBrowse link
G Spidr scaffold protein involved in DNA repair involved_in ISO (PMID:23754376) RGD PMID:23754376 NCBI chr11:98,270,779...98,511,760
Ensembl chr11:84,766,593...85,007,600 		JBrowse link
G Terf2ip TERF2 interacting protein involved_in ISS
ISO		 GO_REF:0000024
(PMID:20339076)		 UniProt
RGD		 PMID:20339076 GO_REF:0000024 NCBI chr19:39,976,965...39,984,055
Ensembl chr19:39,976,906...39,984,064 		JBrowse link
G Tex15 testis expressed 15, meiosis and synapsis associated involved_in
acts_upstream_of_or_within		 IBA
ISO		 GO_REF:0000033
MGI:3526165 (PMID:18283110)		 GO_Central
RGD		 PMID:18283110 GO_REF:0000033 NCBI chr16:58,598,991...58,659,005
Ensembl chr16:58,598,989...58,658,467 		JBrowse link
G Usp51 ubiquitin specific peptidase 51 involved_in ISO (PMID:27083998) RGD PMID:27083998 NCBI chr  X:18,374,940...18,381,472
Ensembl chr  X:18,376,930...18,379,888 		JBrowse link
G Zfp365 zinc finger protein 365 involved_in ISS
IBA
IEA		 GO_REF:0000024
GO_REF:0000033
GO_REF:0000107		 UniProt
GO_Central
Ensembl		 GO_REF:0000024 GO_REF:0000033 GO_REF:0000107 NCBI chr20:20,666,240...20,689,734
Ensembl chr20:20,666,240...20,691,238 		JBrowse link
regulation of double-strand break repair via nonhomologous end joining term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Actr2 actin related protein 2 NOT|involved_in ISS
ISO		 GO_REF:0000024
(PMID:29925947)		 UniProt
RGD		 PMID:29925947 GO_REF:0000024 NCBI chr14:94,296,443...94,333,735
Ensembl chr14:94,296,443...94,340,524 		JBrowse link
G Dek DEK proto-oncogene involved_in
acts_upstream_of_or_within		 IEA
ISO		 GO_REF:0000107
MGI:3838711 (PMID:21653549)		 Ensembl
RGD		 PMID:21653549 GO_REF:0000107 NCBI chr17:17,580,804...17,602,825
Ensembl chr17:17,580,843...17,602,808 		JBrowse link
G Mrnip MRN complex interacting protein involved_in ISO (PMID:27568553) RGD PMID:27568553 NCBI chr10:34,501,359...34,525,474
Ensembl chr10:34,501,384...34,525,469 		JBrowse link
G Nsd2 nuclear receptor binding SET domain protein 2 acts_upstream_of_or_within ISO (PMID:23241889) RGD PMID:23241889 NCBI chr14:76,833,179...76,911,304
Ensembl chr14:76,835,637...76,913,641 		JBrowse link
G Pot1 protection of telomeres 1 involved_in ISO (PMID:29227966) RGD PMID:29227966 NCBI chr 4:55,170,821...55,228,588
Ensembl chr 4:54,205,332...54,263,042 		JBrowse link
G Usp51 ubiquitin specific peptidase 51 involved_in ISO (PMID:27083998) RGD PMID:27083998 NCBI chr  X:18,374,940...18,381,472
Ensembl chr  X:18,376,930...18,379,888 		JBrowse link
G Was WASP actin nucleation promoting factor NOT|involved_in ISO (PMID:29925947) RGD PMID:29925947 NCBI chr  X:17,077,057...17,085,802
Ensembl chr  X:14,405,124...14,413,849 		JBrowse link
regulation of isotype switching term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Aplf aprataxin and PNKP like factor acts_upstream_of_or_within ISO MGI:4128102 (PMID:21211721) RGD PMID:21211721 NCBI chr 4:120,070,471...120,122,656
Ensembl chr 4:120,070,471...120,122,633 		JBrowse link
G Mir181b1 microRNA 181b-1 acts_upstream_of_or_within ISO (PMID:18762567) RGD PMID:18762567 NCBI chr13:49,485,688...49,485,797
Ensembl chr13:49,485,688...49,485,797 		JBrowse link
G Mir181b2 microRNA 181b-2 acts_upstream_of_or_within ISO (PMID:18762567) RGD PMID:18762567 NCBI chr 3:22,616,948...22,617,035
Ensembl chr 3:22,616,948...22,617,035 		JBrowse link
G Supt6h SPT6 homolog, histone chaperone and transcription elongation factor involved_in ISO (PMID:21518874) RGD PMID:21518874 NCBI chr10:63,103,920...63,140,780
Ensembl chr10:63,103,921...63,140,780 		JBrowse link
regulation of isotype switching to IgG isotypes term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Foxp3 forkhead box P3 acts_upstream_of_or_within ISO MGI:3696705 (PMID:16275384) RGD PMID:16275384 NCBI chr  X:17,580,380...17,601,181
Ensembl chr  X:14,908,494...14,923,838 		JBrowse link
G Il27ra interleukin 27 receptor subunit alpha acts_upstream_of_or_within ISO MGI:3525439 (PMID:11057672) RGD PMID:11057672 NCBI chr19:41,014,730...41,026,740
Ensembl chr19:24,109,972...24,121,938 		JBrowse link
G Ndfip1 Nedd4 family interacting protein 1 involved_in
acts_upstream_of_or_within		 IEA
ISO		 GO_REF:0000107
MGI:3695433 (PMID:17137798)		 Ensembl
RGD		 PMID:17137798 GO_REF:0000107 NCBI chr18:30,516,931...30,567,199
Ensembl chr18:30,250,613...30,322,311 		JBrowse link
G Slc15a4 solute carrier family 15 member 4 involved_in IEA
ISO
ISS		 GO_REF:0000107
(PMID:25310967)
GO_REF:0000024		 Ensembl
RGD
UniProt		 PMID:25310967 GO_REF:0000024 GO_REF:0000107 NCBI chr12:34,684,583...34,718,429
Ensembl chr12:29,063,015...29,082,480 		JBrowse link
regulation of mismatch repair term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Axin2 axin 2 involved_in ISO
IEA		 (PMID:11017067)
GO_REF:0000107		 RGD
Ensembl		 PMID:11017067 GO_REF:0000107 NCBI chr10:94,393,379...94,426,579
Ensembl chr10:93,899,245...93,926,231 		JBrowse link
regulation of mitochondrial DNA metabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Mpv17 mitochondrial inner membrane protein MPV17 involved_in ISO
IBA
IEA
ISS		 (PMID:26760297)
GO_REF:0000033
GO_REF:0000107
GO_REF:0000024		 RGD
GO_Central
Ensembl
UniProt		 PMID:26760297 GO_REF:0000024 GO_REF:0000033 GO_REF:0000107 NCBI chr 6:25,221,668...25,236,241
Ensembl chr 6:25,222,896...25,236,244 		JBrowse link
G Stox1 storkhead box 1 involved_in ISO (PMID:24738702) RGD PMID:24738702 NCBI chr20:30,598,284...30,666,371
Ensembl chr20:30,598,168...30,666,939 		JBrowse link
regulation of mitochondrial DNA replication term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Mettl4 methyltransferase 4, N6-adenosine involved_in ISO (PMID:32183942) RGD PMID:32183942 NCBI chr 9:111,440,976...111,523,871
Ensembl chr 9:111,441,027...111,464,749 		JBrowse link
regulation of mitotic cell cycle DNA replication term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Zmpste24 zinc metallopeptidase STE24 acts_upstream_of_or_within ISO MGI:2180033 (PMID:15980864) RGD PMID:15980864 NCBI chr 5:134,627,218...134,660,360
Ensembl chr 5:134,627,229...134,660,110 		JBrowse link
regulation of mitotic recombination term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Rad50 RAD50 double strand break repair protein involved_in ISO
IEA
ISS		 (PMID:8756642)
GO_REF:0000107
GO_REF:0000024		 RGD
Ensembl
UniProt		 PMID:8756642 GO_REF:0000024 GO_REF:0000107 NCBI chr10:38,310,147...38,362,100
Ensembl chr10:37,808,726...37,861,396 		JBrowse link
regulation of nuclear cell cycle DNA replication term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Aicda activation-induced cytidine deaminase involved_in ISO (PMID:19734146) RGD PMID:19734146 NCBI chr 4:157,446,120...157,455,958
Ensembl chr 4:155,774,132...155,783,972 		JBrowse link
G Cdt1 chromatin licensing and DNA replication factor 1 acts_upstream_of_or_within ISO (PMID:11850834) RGD PMID:11850834 NCBI chr19:50,620,713...50,625,659
Ensembl chr19:50,620,713...50,625,659 		JBrowse link
G Dach1 dachshund family transcription factor 1 involved_in ISO (PMID:16980615) RGD PMID:16980615 NCBI chr15:74,528,122...74,909,811
Ensembl chr15:74,529,208...74,909,922 		JBrowse link
G Ilkap ILK associated serine/threonine phosphatase IDA RGD PMID:9857069 RGD:632254 NCBI chr 9:91,966,440...91,988,791
Ensembl chr 9:91,966,441...91,988,892 		JBrowse link
G Nuggc nuclear GTPase, germinal center associated involved_in ISO (PMID:19734146) RGD PMID:19734146 NCBI chr15:39,821,851...39,866,122
Ensembl chr15:39,821,855...39,866,122 		JBrowse link
regulation of nucleotide-excision repair term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Cul4a cullin 4A acts_upstream_of_or_within ISO MGI:3851025 (PMID:19481525) RGD PMID:19481525 NCBI chr16:76,385,298...76,422,316
Ensembl chr16:76,384,546...76,422,330 		JBrowse link
G Hmgb1 high mobility group box 1 involved_in ISO (PMID:18650382) RGD PMID:18650382 NCBI chr12:11,009,236...11,015,941
Ensembl chr12:5,901,586...5,978,565
Ensembl chr16:5,901,586...5,978,565 		JBrowse link
G Kat7 lysine acetyltransferase 7 involved_in ISO
ISS		 (PMID:28719581)
GO_REF:0000024		 RGD
UniProt		 PMID:28719581 GO_REF:0000024 NCBI chr10:80,718,335...80,752,387
Ensembl chr10:80,221,524...80,255,567 		JBrowse link
G Rad52 RAD52 homolog, DNA repair protein acts_upstream_of_or_within ISO (PMID:19506022) RGD PMID:19506022 NCBI chr 4:153,106,062...153,128,598
Ensembl chr 4:153,106,062...153,128,207 		JBrowse link
regulation of single strand break repair term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Parp1 poly (ADP-ribose) polymerase 1 acts_upstream_of_or_within ISO (PMID:25378300) RGD PMID:25378300 NCBI chr13:94,839,484...94,871,295
Ensembl chr13:92,307,586...92,339,404 		JBrowse link
regulation of telomere maintenance term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Hdac8 histone deacetylase 8 involved_in ISO
IEA		 (PMID:16809764)
GO_REF:0000107		 RGD
Ensembl		 PMID:16809764 GO_REF:0000107 NCBI chr  X:67,385,288...67,593,014
Ensembl chr  X:67,385,289...67,592,923 		JBrowse link
G Lmna lamin A/C involved_in ISO (PMID:25399868) RGD PMID:25399868 NCBI chr 2:176,237,564...176,265,301
Ensembl chr 2:173,939,751...173,960,423 		JBrowse link
G Myc MYC proto-oncogene, bHLH transcription factor involved_in ISO
ISS		 (PMID:17765874)
GO_REF:0000024		 RGD
UniProt		 PMID:17765874 GO_REF:0000024 NCBI chr 7:95,483,105...95,488,031
Ensembl chr 7:93,593,705...93,598,630 		JBrowse link
G Smg1 SMG1, nonsense mediated mRNA decay associated PI3K related kinase involved_in ISO (PMID:17916692) RGD PMID:17916692 NCBI chr 1:172,441,892...172,543,667
Ensembl chr 1:172,444,936...172,543,698 		JBrowse link
G Smg5 SMG5 nonsense mediated mRNA decay factor involved_in ISO (PMID:16809764) RGD PMID:16809764 NCBI chr 2:173,804,987...173,832,102
Ensembl chr 2:173,805,019...173,832,102 		JBrowse link
G Smg6 SMG6 nonsense mediated mRNA decay factor involved_in ISO (PMID:12699629), (PMID:17916692) RGD PMID:12699629 PMID:17916692 NCBI chr10:59,786,258...60,014,395
Ensembl chr10:59,786,258...60,014,395 		JBrowse link
G Terf2 telomeric repeat binding factor 2 involved_in ISO (PMID:22536324) RGD PMID:22536324 NCBI chr19:34,976,963...35,005,813
Ensembl chr19:34,977,471...35,005,819 		JBrowse link
G Upf1 UPF1, RNA helicase and ATPase involved_in ISO (PMID:17916692) RGD PMID:17916692 NCBI chr16:19,076,594...19,097,365
Ensembl chr16:19,076,322...19,096,568 		JBrowse link
G Ylpm1 YLP motif containing 1 involved_in
acts_upstream_of_or_within		 IBA
ISO		 GO_REF:0000033
(PMID:15100092)		 GO_Central
RGD		 PMID:15100092 GO_REF:0000033 NCBI chr 6:104,642,615...104,718,508
Ensembl chr 6:104,642,615...104,718,508 		JBrowse link
regulation of telomere maintenance via telomerase term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Atm ATM serine/threonine kinase involved_in ISO UniProtKB:Q9NUX5 (PMID:26586433) RGD PMID:26586433 NCBI chr 8:62,724,939...62,829,040
Ensembl chr 8:53,831,093...53,932,437 		JBrowse link
G Pot1 protection of telomeres 1 involved_in ISO
IBA		 UniProtKB:Q13315 (PMID:26586433)
GO_REF:0000033		 RGD
GO_Central		 PMID:26586433 GO_REF:0000033 NCBI chr 4:55,170,821...55,228,588
Ensembl chr 4:54,205,332...54,263,042 		JBrowse link
G Pot1b protection of telomeres 1B involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr 9:9,670,355...9,728,624
Ensembl chr 9:9,670,362...9,728,532 		JBrowse link
G Terf2 telomeric repeat binding factor 2 involved_in ISO
IBA		 (PMID:19864690), (PMID:23685356)
GO_REF:0000033		 RGD
GO_Central		 PMID:19864690 PMID:23685356 GO_REF:0000033 NCBI chr19:34,976,963...35,005,813
Ensembl chr19:34,977,471...35,005,819 		JBrowse link
regulation of telomere maintenance via telomere lengthening term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Tinf2 TERF1 interacting nuclear factor 2 involved_in ISO (PMID:18669893) RGD PMID:18669893 NCBI chr15:29,170,663...29,178,015
Ensembl chr15:29,170,652...29,176,984 		JBrowse link
regulation of transcription-coupled nucleotide-excision repair term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ercc8 ERCC excision repair 8, CSA ubiquitin ligase complex subunit involved_in ISO (PMID:17297471) RGD PMID:17297471 NCBI chr 2:41,380,901...41,418,294
Ensembl chr 2:39,647,452...39,684,859 		JBrowse link
replication fork arrest term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G LOC120094818 TIMELESS-interacting protein-like involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr 9:113,693,252...113,694,434
Ensembl chr 9:113,543,173...113,605,998 		JBrowse link
G Slfn9 schlafen family member 9 involved_in ISO (PMID:29395061) RGD PMID:29395061 NCBI chr10:67,909,105...67,955,912
Ensembl chr10:67,909,106...67,925,383 		JBrowse link
G Timeless timeless circadian regulator involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr 7:654,804...678,769
Ensembl chr 7:654,822...678,738 		JBrowse link
G Tipin timeless interacting protein involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr 8:64,780,813...64,801,358
Ensembl chr 8:64,780,828...64,801,352
Ensembl chr 9:64,780,828...64,801,352 		JBrowse link
G Tipinl1 TIMELESS interacting protein like 1 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr 9:113,542,841...113,544,022
Ensembl chr 9:113,543,173...113,605,998 		JBrowse link
replication fork processing term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Asf1a anti-silencing function 1A histone chaperone involved_in ISO (PMID:29478807) RGD PMID:29478807 NCBI chr20:32,893,962...32,908,808
Ensembl chr20:32,893,573...32,908,808 		JBrowse link
G Atr ATR serine/threonine kinase involved_in ISO (PMID:29125140) RGD PMID:29125140 NCBI chr 8:96,426,704...96,524,152
Ensembl chr 8:96,426,724...96,524,136 		JBrowse link
G Atrx ATRX, chromatin remodeler involved_in ISS
ISO
IEA		 GO_REF:0000024
(PMID:24651726)
GO_REF:0000107		 UniProt
RGD
Ensembl		 PMID:24651726 GO_REF:0000024 GO_REF:0000107 NCBI chr  X:70,850,981...70,997,330
Ensembl chr  X:70,850,981...70,997,330 		JBrowse link
G Blm BLM RecQ like helicase involved_in ISO (PMID:17115688)
(PMID:29125140)		 RGD PMID:17115688 PMID:29125140 NCBI chr 1:143,819,072...143,905,300
Ensembl chr 1:134,409,857...134,484,312 		JBrowse link
G Bod1l1 biorientation of chromosomes in cell division 1-like 1 involved_in ISO
IBA		 (PMID:26166705)
GO_REF:0000033		 RGD
GO_Central		 PMID:26166705 GO_REF:0000033 NCBI chr14:69,108,483...69,163,255
Ensembl chr14:69,108,491...69,162,490 		JBrowse link
G Brca2 BRCA2, DNA repair associated acts_upstream_of_or_within ISO MGI:1930616 (PMID:14681210) RGD PMID:14681210 NCBI chr12:4,895,092...4,939,340
Ensembl chr12:59,819...100,567 		JBrowse link
G Cdk9 cyclin-dependent kinase 9 involved_in ISO
IEA		 (PMID:20930849)
GO_REF:0000107		 RGD
Ensembl		 PMID:20930849 GO_REF:0000107 NCBI chr 3:36,394,168...36,399,016
Ensembl chr 3:15,996,468...16,002,410 		JBrowse link
G Cenps centromere protein S involved_in ISO (PMID:20347428) RGD PMID:20347428 NCBI chr 5:159,563,917...159,573,534 JBrowse link
G Cenpx centromere protein X involved_in ISO (PMID:20347428) RGD PMID:20347428 NCBI chr10:105,991,469...105,994,310 JBrowse link
G Ddx11 DEAD/H-box helicase 11 involved_in ISO (PMID:26503245) RGD PMID:26503245 NCBI chr 9:105,833,234...105,862,844
Ensembl chr 9:105,833,504...105,862,550 		JBrowse link
G Donson DNA replication fork stabilization factor DONSON involved_in ISO (PMID:28191891) RGD PMID:28191891 NCBI chr11:30,919,834...30,933,150
Ensembl chr11:30,923,239...30,932,889 		JBrowse link
G Eme1 essential meiotic structure-specific endonuclease 1 involved_in ISO
IBA		 (PMID:18413719)
GO_REF:0000033		 RGD
GO_Central		 PMID:18413719 GO_REF:0000033 NCBI chr10:80,083,585...80,092,450
Ensembl chr10:79,586,729...79,595,435 		JBrowse link
G Eme2 essential meiotic structure-specific endonuclease subunit 2 involved_in ISO
IBA		 (PMID:17289582)
GO_REF:0000033		 RGD
GO_Central		 PMID:17289582 GO_REF:0000033 NCBI chr10:13,913,216...13,915,991
Ensembl chr10:13,913,221...13,915,968 		JBrowse link
G Etaa1 ETAA1 activator of ATR kinase involved_in ISO
IBA		 (PMID:27723717), (PMID:27723720)
GO_REF:0000033		 RGD
GO_Central		 PMID:27723717 PMID:27723720 GO_REF:0000033 NCBI chr14:92,298,461...92,314,044
Ensembl chr14:92,299,553...92,314,104 		JBrowse link
G Exd2 exonuclease 3'-5' domain containing 2 involved_in ISO (PMID:31255466) RGD PMID:31255466 NCBI chr 6:100,116,867...100,150,452
Ensembl chr 6:100,116,867...100,150,442 		JBrowse link
G Fam111a FAM111 trypsin like peptidase A involved_in ISO (PMID:32165630) RGD PMID:32165630 NCBI chr 1:209,640,865...209,656,551
Ensembl chr 1:209,640,953...209,656,547 		JBrowse link
G Fancm FA complementation group M involved_in ISO (PMID:20347428) RGD PMID:20347428 NCBI chr 6:88,862,898...88,916,701
Ensembl chr 6:83,127,093...83,180,028 		JBrowse link
G Fbh1 F-box DNA helicase 1 involved_in ISO
IBA		 (PMID:25585578)
(PMID:24108124)
GO_REF:0000033		 RGD
GO_Central		 PMID:24108124 PMID:25585578 GO_REF:0000033 NCBI chr17:66,749,506...66,787,590
Ensembl chr17:66,749,534...66,787,590 		JBrowse link
G Gen1 GEN1 Holliday junction 5' flap endonuclease involved_in ISO (PMID:26578604) RGD PMID:26578604 NCBI chr 6:33,947,599...33,978,461
Ensembl chr 6:33,948,206...33,978,401 		JBrowse link
G Khdc3 KH domain containing 3, subcortical maternal complex member involved_in ISS
ISO		 GO_REF:0000024
(PMID:29125140)		 UniProt
RGD		 PMID:29125140 GO_REF:0000024 NCBI chr 8:82,722,980...82,724,884
Ensembl chr 8:73,842,344...73,844,248 		JBrowse link
G LOC120094818 TIMELESS-interacting protein-like involved_in IEA GO_REF:0000104 UniProt GO_REF:0000104 NCBI chr 9:113,693,252...113,694,434
Ensembl chr 9:113,543,173...113,605,998 		JBrowse link
G LOC134486336 ewing's tumor-associated antigen 1 homolog involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033
G Mms22l MMS22-like, DNA repair protein involved_in ISO
IBA		 (PMID:21055983), (PMID:21055984), (PMID:21055985), (PMID:21113133), (PMID:27797818)
GO_REF:0000033		 RGD
GO_Central		 PMID:21055983 PMID:21055984 PMID:21055985 PMID:21113133 PMID:27797818 GO_REF:0000033 NCBI chr 5:38,197,707...38,313,745
Ensembl chr 5:38,197,779...38,313,745 		JBrowse link
G Mus81 MUS81 structure-specific endonuclease subunit involved_in ISO
IEA		 (PMID:17289582), (PMID:18413719)
GO_REF:0000107		 RGD
Ensembl		 PMID:17289582 PMID:18413719 GO_REF:0000107 NCBI chr 1:202,790,295...202,796,008
Ensembl chr 1:202,790,466...202,795,843 		JBrowse link
G Nucks1 nuclear casein kinase and cyclin-dependent kinase substrate 1 involved_in ISO (PMID:26323318) RGD PMID:26323318 NCBI chr13:43,345,091...43,374,316
Ensembl chr13:43,345,115...43,370,229 		JBrowse link
G Ooep oocyte expressed protein involved_in ISO (PMID:29125140) RGD PMID:29125140 NCBI chr 8:79,223,388...79,224,554
Ensembl chr 8:79,223,375...79,224,541 		JBrowse link
G Pcna proliferating cell nuclear antigen involved_in ISO UniProtKB:Q0VGM9 (PMID:24115439) RGD PMID:24115439 NCBI chr 3:119,499,039...119,502,911
Ensembl chr 3:119,498,810...119,502,995 		JBrowse link
G Polq DNA polymerase theta involved_in ISO (PMID:30655289) RGD PMID:30655289 NCBI chr11:77,179,190...77,281,270
Ensembl chr11:63,673,816...63,775,878 		JBrowse link
G Primpol primase and DNA directed polymerase involved_in IBA
ISO		 GO_REF:0000033
(PMID:24126761), (PMID:24240614), (PMID:24267451), (PMID:28534480)		 GO_Central
RGD		 PMID:24126761 PMID:24240614 PMID:24267451 PMID:28534480 GO_REF:0000033 NCBI chr16:45,681,252...45,715,758
Ensembl chr16:45,681,326...45,715,565 		JBrowse link
G Rad51 RAD51 recombinase involved_in
acts_upstream_of_or_within		 ISO (PMID:18417535), (PMID:22778135), (PMID:25585578)
MGI:5444025 (PMID:22778135)		 RGD PMID:18417535 PMID:22778135 PMID:25585578 NCBI chr 3:126,554,210...126,578,888
Ensembl chr 3:106,100,381...106,125,035 		JBrowse link
G Recql RecQ like helicase involved_in ISS
ISO
IEA		 GO_REF:0000024
(PMID:35025765)
GO_REF:0000107		 UniProt
RGD
Ensembl		 PMID:35025765 GO_REF:0000024 GO_REF:0000107 NCBI chr 4:177,039,351...177,063,968
Ensembl chr 4:175,304,117...175,332,945 		JBrowse link
G Rfwd3 ring finger and WD repeat domain 3 involved_in ISO (PMID:26474068) RGD PMID:26474068 NCBI chr19:39,235,883...39,268,479
Ensembl chr19:39,236,787...39,268,479 		JBrowse link
G Rtel1 regulator of telomere elongation helicase 1 involved_in ISO (PMID:24115439) RGD PMID:24115439 NCBI chr 3:168,427,247...168,465,349
Ensembl chr 3:168,419,579...168,465,348 		JBrowse link
G Setmar SET domain and mariner transposase fusion gene involved_in ISO (PMID:20457750), (PMID:22231448), (PMID:24573677) RGD PMID:20457750 PMID:22231448 PMID:24573677 NCBI chr 4:141,046,058...141,058,183
Ensembl chr 4:141,046,069...141,058,197 		JBrowse link
G Smarcal1 SNF2 related chromatin remodeling annealing helicase 1 involved_in ISS
IBA
ISO		 GO_REF:0000024
GO_REF:0000033
(PMID:19793862)		 UniProt
GO_Central
RGD		 PMID:19793862 GO_REF:0000024 GO_REF:0000033 NCBI chr 9:74,239,718...74,286,156
Ensembl chr 9:74,240,241...74,286,146 		JBrowse link
G Timeless timeless circadian regulator involved_in ISO (PMID:26503245) RGD PMID:26503245 NCBI chr 7:654,804...678,769
Ensembl chr 7:654,822...678,738 		JBrowse link
G Tipin timeless interacting protein involved_in IEA GO_REF:0000002
GO_REF:0000104		 InterPro
UniProt		 GO_REF:0000002 GO_REF:0000104 NCBI chr 8:64,780,813...64,801,358
Ensembl chr 8:64,780,828...64,801,352
Ensembl chr 9:64,780,828...64,801,352 		JBrowse link
G Tipinl1 TIMELESS interacting protein like 1 involved_in IEA GO_REF:0000104 UniProt GO_REF:0000104 NCBI chr 9:113,542,841...113,544,022
Ensembl chr 9:113,543,173...113,605,998 		JBrowse link
G Tonsl tonsoku-like, DNA repair protein involved_in ISS
IBA
ISO		 GO_REF:0000024
GO_REF:0000033
(PMID:21055983), (PMID:21055984), (PMID:21055985), (PMID:27338793), (PMID:29478807)		 UniProt
GO_Central
RGD		 PMID:21055983 PMID:21055984 PMID:21055985 PMID:27338793 PMID:29478807 GO_REF:0000024 GO_REF:0000033 NCBI chr 7:108,345,704...108,360,792
Ensembl chr 7:108,346,047...108,360,750 		JBrowse link
G Traip TRAF-interacting protein involved_in ISO
IBA		 (PMID:26711499), (PMID:27462463)
GO_REF:0000033		 RGD
GO_Central		 PMID:26711499 PMID:27462463 GO_REF:0000033 NCBI chr 8:108,641,860...108,661,640
Ensembl chr 8:108,641,852...108,661,638 		JBrowse link
G Wrn WRN RecQ like helicase involved_in ISO (PMID:12882351), (PMID:17115688) RGD PMID:12882351 PMID:17115688 NCBI chr16:65,466,552...65,602,951
Ensembl chr16:58,763,504...58,895,450 		JBrowse link
G Zranb3 zinc finger RANBP2-type containing 3 involved_in ISO
IBA		 (PMID:22704558), (PMID:22705370)
GO_REF:0000033		 RGD
GO_Central		 PMID:22704558 PMID:22705370 GO_REF:0000033 NCBI chr13:39,440,653...39,595,782
Ensembl chr13:39,440,889...39,595,670 		JBrowse link
replication fork reversal term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Carm1 coactivator-associated arginine methyltransferase 1 involved_in ISO
ISS		 (PMID:33412112)
GO_REF:0000024		 RGD
UniProt		 PMID:33412112 GO_REF:0000024 NCBI chr 8:20,097,262...20,141,950
Ensembl chr 8:20,097,254...20,147,689 		JBrowse link
G Dna2 DNA replication helicase/nuclease 2 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr20:25,661,652...25,690,598
Ensembl chr20:25,662,055...25,716,319 		JBrowse link
G Parp1 poly (ADP-ribose) polymerase 1 involved_in ISS
ISO		 GO_REF:0000024
(PMID:33412112)		 UniProt
RGD		 PMID:33412112 GO_REF:0000024 NCBI chr13:94,839,484...94,871,295
Ensembl chr13:92,307,586...92,339,404 		JBrowse link
G Slc25a16 solute carrier family 25 member 16 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr20:25,691,474...25,717,558
Ensembl chr20:25,662,055...25,716,319 		JBrowse link
G Zranb3 zinc finger RANBP2-type containing 3 involved_in ISO (PMID:22704558) RGD PMID:22704558 NCBI chr13:39,440,653...39,595,782
Ensembl chr13:39,440,889...39,595,670 		JBrowse link
replication-born double-strand break repair via sister chromatid exchange term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Blm BLM RecQ like helicase acts_upstream_of_or_within ISO (PMID:25597246) RGD PMID:25597246 NCBI chr 1:143,819,072...143,905,300
Ensembl chr 1:134,409,857...134,484,312 		JBrowse link
G Fancb FA complementation group B involved_in
acts_upstream_of_or_within		 IBA
ISO		 GO_REF:0000033
(PMID:25520194)		 GO_Central
RGD		 PMID:25520194 GO_REF:0000033 NCBI chr  X:29,403,771...29,420,484
Ensembl chr  X:29,403,771...29,420,192 		JBrowse link
G Nipbl NIPBL, cohesin loading factor involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr 2:57,399,443...57,586,770
Ensembl chr 2:57,399,445...57,565,899 		JBrowse link
G Rad21 RAD21 cohesin complex component involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr 7:85,177,715...85,204,657
Ensembl chr 7:83,287,870...83,314,817 		JBrowse link
G Rad21l1 RAD21 cohesin complex component like 1 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr 3:140,160,128...140,188,324
Ensembl chr 3:140,160,118...140,188,298 		JBrowse link
G Rad51 RAD51 recombinase acts_upstream_of_or_within ISO MGI:5444025|MGI:5444027 (PMID:22778135) RGD PMID:22778135 NCBI chr 3:126,554,210...126,578,888
Ensembl chr 3:106,100,381...106,125,035 		JBrowse link
G Recql5 RecQ like helicase 5 acts_upstream_of_or_within ISO (PMID:25520194) RGD PMID:25520194 NCBI chr10:101,126,544...101,165,739
Ensembl chr10:101,126,547...101,165,652 		JBrowse link
resolution of DNA recombination intermediates term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Blm BLM RecQ like helicase involved_in ISO (PMID:23543748) RGD PMID:23543748 NCBI chr 1:143,819,072...143,905,300
Ensembl chr 1:134,409,857...134,484,312 		JBrowse link
G Gen1 GEN1 Holliday junction 5' flap endonuclease involved_in ISO (PMID:24080495) RGD PMID:24080495 NCBI chr 6:33,947,599...33,978,461
Ensembl chr 6:33,948,206...33,978,401 		JBrowse link
G Rmi1 RecQ mediated genome instability 1 involved_in ISO (PMID:23543748) RGD PMID:23543748 NCBI chr17:6,256,533...6,264,523
Ensembl chr17:6,256,450...6,264,695 		JBrowse link
G Rmi2 RecQ mediated genome instability 2 involved_in ISO (PMID:23543748) RGD PMID:23543748 NCBI chr10:4,829,333...4,837,264
Ensembl chr10:4,830,553...4,837,235 		JBrowse link
G Top3a DNA topoisomerase III alpha involved_in ISO (PMID:23543748) RGD PMID:23543748 NCBI chr10:45,419,219...45,457,356
Ensembl chr10:45,419,217...45,457,559 		JBrowse link
resolution of meiotic recombination intermediates term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ankle1 ankyrin repeat and LEM domain containing 1 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr16:18,076,413...18,082,356
Ensembl chr16:18,076,492...18,083,729 		JBrowse link
G Cenps centromere protein S involved_in ISO (PMID:20347428) RGD PMID:20347428 NCBI chr 5:159,563,917...159,573,534 JBrowse link
G Cenpx centromere protein X involved_in ISO (PMID:20347428) RGD PMID:20347428 NCBI chr10:105,991,469...105,994,310 JBrowse link
G Eme1 essential meiotic structure-specific endonuclease 1 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr10:80,083,585...80,092,450
Ensembl chr10:79,586,729...79,595,435 		JBrowse link
G Eme2 essential meiotic structure-specific endonuclease subunit 2 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr10:13,913,216...13,915,991
Ensembl chr10:13,913,221...13,915,968 		JBrowse link
G Ercc4 ERCC excision repair 4, endonuclease catalytic subunit involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr10:2,926,085...2,958,176
Ensembl chr10:2,419,038...2,448,369
Ensembl chr10:2,419,038...2,448,369 		JBrowse link
G Ercc4l1 excision repair cross-complementing rodent repair deficiency, complementation group 4-like 1 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr10:954,927...983,651
Ensembl chr10:954,977...983,174 		JBrowse link
G Fancm FA complementation group M involved_in ISO (PMID:20347428) RGD PMID:20347428 NCBI chr 6:88,862,898...88,916,701
Ensembl chr 6:83,127,093...83,180,028 		JBrowse link
G Hfm1 helicase for meiosis 1 involved_in
acts_upstream_of_or_within		 IBA
ISO		 GO_REF:0000033
(PMID:23555294)		 GO_Central
RGD		 PMID:23555294 GO_REF:0000033 NCBI chr14:3,002,103...3,108,567
Ensembl chr14:2,856,599...2,939,238 		JBrowse link
G Meiob meiosis specific with OB-fold involved_in ISS
ISO
IBA		 GO_REF:0000024
(PMID:24068956), (PMID:24240703)
GO_REF:0000033		 UniProt
RGD
GO_Central		 PMID:24068956 PMID:24240703 GO_REF:0000024 GO_REF:0000033 NCBI chr10:13,833,170...13,865,684
Ensembl chr10:13,833,750...13,865,046 		JBrowse link
G Mlh1 mutL homolog 1 involved_in
acts_upstream_of_or_within		 IEA
ISO		 GO_REF:0000107
MGI:1857946 (PMID:10385520), (PMID:12217320)		 Ensembl
RGD		 PMID:10385520 PMID:12217320 GO_REF:0000107 NCBI chr 8:120,074,871...120,112,109
Ensembl chr 8:111,196,468...111,233,617 		JBrowse link
G Mus81 MUS81 structure-specific endonuclease subunit involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr 1:202,790,295...202,796,008
Ensembl chr 1:202,790,466...202,795,843 		JBrowse link
G Rmi1 RecQ mediated genome instability 1 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr17:6,256,533...6,264,523
Ensembl chr17:6,256,450...6,264,695 		JBrowse link
G Shoc1 shortage in chiasmata 1 involved_in ISO
IBA		 (PMID:29742103)
GO_REF:0000033		 RGD
GO_Central		 PMID:29742103 GO_REF:0000033 NCBI chr 5:73,864,423...73,956,487
Ensembl chr 5:73,866,334...73,956,444 		JBrowse link
G Slx4 SLX4 structure-specific endonuclease subunit involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr10:11,526,623...11,549,313
Ensembl chr10:11,528,424...11,549,295 		JBrowse link
G Tex11 testis expressed 11 acts_upstream_of_or_within ISO MGI:3526163 (PMID:18316482) RGD PMID:18316482 NCBI chr  X:65,932,904...66,196,525
Ensembl chr  X:65,932,988...66,196,187 		JBrowse link
G Top2a DNA topoisomerase II alpha involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr10:84,441,954...84,473,093
Ensembl chr10:83,945,735...83,976,874 		JBrowse link
G Top2b DNA topoisomerase II beta involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr15:9,051,340...9,111,721
Ensembl chr15:9,051,341...9,112,085 		JBrowse link
resolution of mitotic recombination intermediates term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Gen1 GEN1 Holliday junction 5' flap endonuclease involved_in ISO (PMID:23108668) RGD PMID:23108668 NCBI chr 6:33,947,599...33,978,461
Ensembl chr 6:33,948,206...33,978,401 		JBrowse link
G Xrcc3 X-ray repair cross complementing 3 involved_in ISO
IBA		 (PMID:23108668)
GO_REF:0000033		 RGD
GO_Central		 PMID:23108668 GO_REF:0000033 NCBI chr 6:136,684,558...136,694,822
Ensembl chr 6:130,863,959...130,872,444 		JBrowse link
RNA-templated DNA biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ENSRNOG00000065207 involved_in IEA GO_REF:0000108 GOC GO_REF:0000108 Ensembl chr 4:104,244,335...104,246,214 JBrowse link
G ENSRNOG00000067229 involved_in IEA GO_REF:0000002 InterPro GO_REF:0000002 Ensembl chr 4:83,921,470...83,930,590 JBrowse link
G ENSRNOG00000067248 involved_in IEA GO_REF:0000108 GOC GO_REF:0000108 Ensembl chr 9:77,055,483...77,060,879 JBrowse link
G ENSRNOG00000068406 involved_in IEA GO_REF:0000108 GOC GO_REF:0000108 Ensembl chr 4:51,689,402...51,693,026 JBrowse link
G ENSRNOG00000069140 involved_in IEA GO_REF:0000108 GOC GO_REF:0000108 Ensembl chr 4:12,337,547...12,343,488 JBrowse link
G ENSRNOG00000069624 involved_in IEA GO_REF:0000002 InterPro GO_REF:0000002 Ensembl chr 4:147,700,824...147,706,682 JBrowse link
G LOC134480950 igE-binding protein-like involved_in IEA GO_REF:0000108 GOC GO_REF:0000108 Ensembl chr11:12,193,771...12,199,421 JBrowse link
G Ormdl1 ORMDL sphingolipid biosynthesis regulator 1 involved_in IEA GO_REF:0000108 GOC GO_REF:0000108 NCBI chr 9:48,243,365...48,253,316
Ensembl chr 9:48,237,572...48,253,211 		JBrowse link
G Tep1 telomerase associated protein 1 involved_in IEA
IC		 GO_REF:0000108
PMID:9118230		 GOC PMID:9118230 GO_REF:0000108, RGD:1299082 NCBI chr15:24,045,876...24,093,526
Ensembl chr15:24,045,878...24,093,526 		JBrowse link
G Terf2 telomeric repeat binding factor 2 involved_in IEA GO_REF:0000108 GOC GO_REF:0000108 NCBI chr19:34,976,963...35,005,813
Ensembl chr19:34,977,471...35,005,819 		JBrowse link
G Tert telomerase reverse transcriptase involved_in ISO
IEA		 (PMID:9398860)
GO_REF:0000108		 RGD
GOC		 PMID:9398860 GO_REF:0000108 NCBI chr 1:31,465,766...31,488,650
Ensembl chr 1:29,637,506...29,659,561 		JBrowse link
single strand break repair term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Aplf aprataxin and PNKP like factor involved_in ISO (PMID:17396150) RGD PMID:17396150 NCBI chr 4:120,070,471...120,122,656
Ensembl chr 4:120,070,471...120,122,633 		JBrowse link
G Aptx aprataxin involved_in ISO
IBA
IEA		 (PMID:14755728)
(PMID:16964241)
GO_REF:0000033
GO_REF:0000107
(PMID:15044383), (PMID:17519253)		 RGD
GO_Central
Ensembl		 PMID:14755728 PMID:15044383 PMID:16964241 PMID:17519253 GO_REF:0000033 GO_REF:0000107 NCBI chr 5:55,798,896...55,822,963
Ensembl chr 5:55,800,248...55,822,855 		JBrowse link
G Ercc6 ERCC excision repair 6, chromatin remodeling factor involved_in ISO (PMID:29545921) RGD PMID:29545921 NCBI chr16:7,771,311...7,841,895
Ensembl chr16:7,765,013...7,835,587 		JBrowse link
G Ercc8 ERCC excision repair 8, CSA ubiquitin ligase complex subunit involved_in ISO (PMID:29545921) RGD PMID:29545921 NCBI chr 2:41,380,901...41,418,294
Ensembl chr 2:39,647,452...39,684,859 		JBrowse link
G Lig4 DNA ligase 4 involved_in ISO (PMID:8798671) RGD PMID:8798671 NCBI chr16:79,518,393...79,526,956
Ensembl chr16:79,518,312...79,527,040 		JBrowse link
G Neil3 nei-like DNA glycosylase 3 involved_in ISO (PMID:19170771) RGD PMID:19170771 NCBI chr16:38,359,305...38,418,528
Ensembl chr16:38,359,371...38,418,527 		JBrowse link
G Sirt1 sirtuin 1 involved_in ISO
IEA		 (PMID:20097625)
GO_REF:0000107		 RGD
Ensembl		 PMID:20097625 GO_REF:0000107 NCBI chr20:25,305,953...25,328,000
Ensembl chr20:25,306,917...25,329,260 		JBrowse link
G Tdp1 tyrosyl-DNA phosphodiesterase 1 involved_in
acts_upstream_of_or_within		 ISO
IEA		 (PMID:15811850), (PMID:17600775)
MGI:3818340 (PMID:17914460), (PMID:17948061)
GO_REF:0000107		 RGD
Ensembl		 PMID:15811850 PMID:17600775 PMID:17914460 PMID:17948061 GO_REF:0000107 NCBI chr 6:119,163,192...119,231,029
Ensembl chr 6:119,163,166...119,231,021 		JBrowse link
G Tnp1 transition protein 1 involved_in ISS
ISO		 GO_REF:0000024
(PMID:12743712)		 UniProt
RGD		 PMID:12743712 GO_REF:0000024 NCBI chr 9:74,594,463...74,595,072
Ensembl chr 9:74,594,466...74,595,274 		JBrowse link
G Trpc2 transient receptor potential cation channel subfamily C member 2 involved_in IEA GO_REF:0000002 InterPro GO_REF:0000002 NCBI chr 1:165,871,991...165,885,339
Ensembl chr 1:156,440,305...156,473,073 		JBrowse link
G Xndc1 Xrcc1 N-terminal domain containing 1 involved_in IEA GO_REF:0000002 InterPro GO_REF:0000002 NCBI chr 1:156,440,284...156,460,609 JBrowse link
G Xrcc1 X-ray repair cross complementing 1 involved_in IEA
ISO		 GO_REF:0000002
(PMID:28002403)		 InterPro
RGD		 PMID:28002403 GO_REF:0000002 NCBI chr 1:89,268,721...89,296,619
Ensembl chr 1:80,141,207...80,168,701 		JBrowse link
somatic cell DNA recombination term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Swap70 switching B-cell complex subunit SWAP70 acts_upstream_of_or_within ISO (PMID:9642267) RGD PMID:9642267 NCBI chr 1:164,267,588...164,328,796
Ensembl chr 1:164,267,609...164,328,794 		JBrowse link
somatic recombination of immunoglobulin gene segments term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Mlh1 mutL homolog 1 acts_upstream_of_or_within ISO MGI:1857946 (PMID:11828012) RGD PMID:11828012 NCBI chr 8:120,074,871...120,112,109
Ensembl chr 8:111,196,468...111,233,617 		JBrowse link
G Msh2 mutS homolog 2 acts_upstream_of_or_within ISO MGI:109352|MGI:1857940|MGI:2151801|MGI:2680817 (PMID:11828012), (PMID:14563316), (PMID:14568978), (PMID:15494304), (PMID:15955838) RGD PMID:11828012 PMID:14563316 PMID:14568978 PMID:15494304 PMID:15955838 NCBI chr 6:12,567,368...12,626,534
Ensembl chr 6:6,813,795...6,872,938 		JBrowse link
G Msh3 mutS homolog 3 acts_upstream_of_or_within ISO MGI:1858056 (PMID:15238604) RGD PMID:15238604 NCBI chr 2:25,179,400...25,320,857 JBrowse link
G Msh6 mutS homolog 6 acts_upstream_of_or_within ISO MGI:1858014 (PMID:15238604) RGD PMID:15238604 NCBI chr 6:12,316,190...12,333,505
Ensembl chr 6:6,562,632...6,579,956 		JBrowse link
G Pms2 PMS1 homolog 2, mismatch repair system component acts_upstream_of_or_within ISO MGI:1857947 (PMID:11828012) RGD PMID:11828012 NCBI chr12:15,790,478...15,814,790
Ensembl chr12:10,676,764...10,701,066 		JBrowse link
G Ung uracil-DNA glycosylase acts_upstream_of_or_within ISO MGI:101816|MGI:2182610 (PMID:15494304) RGD PMID:15494304 NCBI chr12:48,145,838...48,154,789
Ensembl chr12:42,485,276...42,494,206 		JBrowse link
somatic recombination of immunoglobulin genes involved in immune response term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Mlh1 mutL homolog 1 acts_upstream_of_or_within ISO MGI:101816 (PMID:12743174) RGD PMID:12743174 NCBI chr 8:120,074,871...120,112,109
Ensembl chr 8:111,196,468...111,233,617 		JBrowse link
G Msh2 mutS homolog 2 involved_in
acts_upstream_of_or_within		 IBA
ISO		 GO_REF:0000033
MGI:101938 (PMID:12743174)		 GO_Central
RGD		 PMID:12743174 GO_REF:0000033 NCBI chr 6:12,567,368...12,626,534
Ensembl chr 6:6,813,795...6,872,938 		JBrowse link
T cell receptor V(D)J recombination term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Bcl11b BCL11 transcription factor B acts_upstream_of_or_within ISO MGI:2663971 (PMID:12717433) RGD PMID:12717433 NCBI chr 6:126,834,531...126,927,720
Ensembl chr 6:126,834,531...126,928,224 		JBrowse link
G Lef1 lymphoid enhancer binding factor 1 involved_in
acts_upstream_of_or_within		 IEA
ISO		 GO_REF:0000107
MGI:98507 (PMID:9462507)		 Ensembl
RGD		 PMID:9462507 GO_REF:0000107 NCBI chr 2:222,340,541...222,453,931
Ensembl chr 2:219,666,592...219,779,794 		JBrowse link
G Lig4 DNA ligase 4 acts_upstream_of_or_within ISO MGI:1857732 (PMID:10911993) RGD PMID:10911993 NCBI chr16:79,518,393...79,526,956
Ensembl chr16:79,518,312...79,527,040 		JBrowse link
G Prkdc protein kinase, DNA-activated, catalytic subunit acts_upstream_of_or_within ISO MGI:2383951 (PMID:9768755) RGD PMID:9768755 NCBI chr11:98,544,952...98,762,499
Ensembl chr11:85,040,792...85,257,952 		JBrowse link
G Tcf7 transcription factor 7 acts_upstream_of_or_within ISO MGI:96770 (PMID:9462507) RGD PMID:9462507 NCBI chr10:36,924,363...36,954,279
Ensembl chr10:36,423,445...36,453,535 		JBrowse link
t-circle formation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ercc1 ERCC excision repair 1, endonuclease non-catalytic subunit involved_in ISO (PMID:22579284) RGD PMID:22579284 NCBI chr 1:88,099,308...88,135,966
Ensembl chr 1:78,996,390...79,007,963 		JBrowse link
G Nbn nibrin involved_in ISO
IEA		 (PMID:27918544)
GO_REF:0000107		 RGD
Ensembl		 PMID:27918544 GO_REF:0000107 NCBI chr 5:34,256,678...34,291,163
Ensembl chr 5:29,459,457...29,494,150 		JBrowse link
G Slx1b SLX1 homolog B, structure-specific endonuclease subunit involved_in ISO (PMID:24012755)
(PMID:22579284)		 RGD PMID:22579284 PMID:24012755 NCBI chr 1:181,286,190...181,291,739
Ensembl chr 1:181,283,921...181,291,775 		JBrowse link
G Slx4 SLX4 structure-specific endonuclease subunit involved_in ISO (PMID:24012755)
(PMID:22579284)		 RGD PMID:22579284 PMID:24012755 NCBI chr10:11,526,623...11,549,313
Ensembl chr10:11,528,424...11,549,295 		JBrowse link
G Xrcc3 X-ray repair cross complementing 3 involved_in ISO
IBA		 (PMID:21903669)
GO_REF:0000033		 RGD
GO_Central		 PMID:21903669 GO_REF:0000033 NCBI chr 6:136,684,558...136,694,822
Ensembl chr 6:130,863,959...130,872,444 		JBrowse link
telomere capping term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Acd ACD, shelterin complex subunit and telomerase recruitment factor involved_in ISO
IBA		 UniProtKB:Q9NUX5 (PMID:17632522), (PMID:21852327), (PMID:25172512)
GO_REF:0000033		 RGD
GO_Central		 PMID:17632522 PMID:21852327 PMID:25172512 GO_REF:0000033 NCBI chr19:33,586,739...33,589,481
Ensembl chr19:33,586,745...33,589,461 		JBrowse link
G Dclre1b DNA cross-link repair 1B involved_in ISO (PMID:20479256) RGD PMID:20479256 NCBI chr 2:191,309,909...191,318,399
Ensembl chr 2:191,309,913...191,318,423 		JBrowse link
G Hnrnpa2b1 heterogeneous nuclear ribonucleoprotein A2/B1 involved_in IDA PMID:15659580 UniProt PMID:15659580 RGD:10680046 NCBI chr 4:81,867,354...81,875,886
Ensembl chr 4:80,534,651...80,545,249 		JBrowse link
G Pot1 protection of telomeres 1 involved_in ISO
IBA		 UniProtKB:Q96AP0 (PMID:15657433), (PMID:17632522), (PMID:21852327), (PMID:27013236), (PMID:30586141), (PMID:35420632), (PMID:37140166)
GO_REF:0000033		 RGD
GO_Central		 PMID:15657433 PMID:17632522 PMID:21852327 PMID:27013236 PMID:30586141 More... GO_REF:0000033 NCBI chr 4:55,170,821...55,228,588
Ensembl chr 4:54,205,332...54,263,042 		JBrowse link
G Pot1b protection of telomeres 1B involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr 9:9,670,355...9,728,624
Ensembl chr 9:9,670,362...9,728,532 		JBrowse link
G Prkdc protein kinase, DNA-activated, catalytic subunit involved_in ISO (PMID:18710952) RGD PMID:18710952 NCBI chr11:98,544,952...98,762,499
Ensembl chr11:85,040,792...85,257,952 		JBrowse link
G Spdya speedy/RINGO cell cycle regulator family member A acts_upstream_of_or_within ISO MGI:5888863 (PMID:28031483) RGD PMID:28031483 NCBI chr 6:23,905,574...23,954,926
Ensembl chr 6:23,910,223...23,954,850 		JBrowse link
G Stn1 STN1 subunit of CST complex involved_in IEA GO_REF:0000002 InterPro GO_REF:0000002 NCBI chr 1:256,336,916...256,371,143
Ensembl chr 1:246,395,613...246,429,531 		JBrowse link
G Terf1 telomeric repeat binding factor 1 involved_in ISO (PMID:21852327) RGD PMID:21852327 NCBI chr 5:3,443,103...3,472,377
Ensembl chr 5:3,443,106...3,472,340 		JBrowse link
G Terf2 telomeric repeat binding factor 2 involved_in ISO (PMID:12768206), (PMID:14690602), (PMID:15657433), (PMID:21852327) RGD PMID:12768206 PMID:14690602 PMID:15657433 PMID:21852327 NCBI chr19:34,976,963...35,005,813
Ensembl chr19:34,977,471...35,005,819 		JBrowse link
G Tinf2 TERF1 interacting nuclear factor 2 involved_in ISO (PMID:15133513), (PMID:18443218), (PMID:21852327) RGD PMID:15133513 PMID:18443218 PMID:21852327 NCBI chr15:29,170,663...29,178,015
Ensembl chr15:29,170,652...29,176,984 		JBrowse link
telomere maintenance term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Acd ACD, shelterin complex subunit and telomerase recruitment factor acts_upstream_of_or_within ISO (PMID:15181449) RGD PMID:15181449 NCBI chr19:33,586,739...33,589,481
Ensembl chr19:33,586,745...33,589,461 		JBrowse link
G Actl6a actin-like 6A involved_in ISO (PMID:23979016) RGD PMID:23979016 NCBI chr 2:117,413,206...117,436,758
Ensembl chr 2:115,492,285...115,508,401 		JBrowse link
G Actr5 actin related protein 5 involved_in ISO (PMID:23979016) RGD PMID:23979016 NCBI chr 3:147,282,461...147,295,870
Ensembl chr 3:147,282,624...147,296,110 		JBrowse link
G Actr8 actin related protein 8 involved_in ISO (PMID:23979016) RGD PMID:23979016 NCBI chr16:5,164,131...5,186,353
Ensembl chr16:5,164,129...5,178,577 		JBrowse link
G Apex1 apurinic/apyrimidinic endodeoxyribonuclease 1 involved_in ISO (PMID:24703901) RGD PMID:24703901 NCBI chr15:26,618,146...26,620,330
Ensembl chr15:24,144,362...24,146,785 		JBrowse link
G Atm ATM serine/threonine kinase involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr 8:62,724,939...62,829,040
Ensembl chr 8:53,831,093...53,932,437 		JBrowse link
G Atr ATR serine/threonine kinase involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr 8:96,426,704...96,524,152
Ensembl chr 8:96,426,724...96,524,136 		JBrowse link
G Blm BLM RecQ like helicase involved_in
acts_upstream_of_or_within		 IBA
ISO		 GO_REF:0000033
(PMID:11735402)
MGI:109558|MGI:109635 (PMID:15367665)		 GO_Central
RGD		 PMID:11735402 PMID:15367665 GO_REF:0000033 NCBI chr 1:143,819,072...143,905,300
Ensembl chr 1:134,409,857...134,484,312 		JBrowse link
G Ccne1 cyclin E1 involved_in
acts_upstream_of_or_within		 IEA
ISO		 GO_REF:0000107
MGI:1329034 (PMID:24586195)		 Ensembl
RGD		 PMID:24586195 GO_REF:0000107 NCBI chr 1:99,918,672...99,927,986
Ensembl chr 1:90,781,949...90,791,101 		JBrowse link
G Ccne2 cyclin E2 acts_upstream_of_or_within ISO MGI:88316 (PMID:24586195) RGD PMID:24586195 NCBI chr 5:29,082,169...29,094,879
Ensembl chr 5:24,284,922...24,297,632 		JBrowse link
G Ctc1 CST telomere replication complex component 1 involved_in ISO (PMID:19854131) RGD PMID:19854131 NCBI chr10:53,714,614...53,735,298
Ensembl chr10:53,714,644...53,735,298 		JBrowse link
G Dclre1b DNA cross-link repair 1B involved_in ISO
IBA
ISS		 (PMID:20655466)
GO_REF:0000033
GO_REF:0000024		 RGD
GO_Central
UniProt		 PMID:20655466 GO_REF:0000024 GO_REF:0000033 NCBI chr 2:191,309,909...191,318,399
Ensembl chr 2:191,309,913...191,318,423 		JBrowse link
G Dclre1c DNA cross-link repair 1C involved_in
acts_upstream_of_or_within		 IEA
ISO
IBA		 GO_REF:0000107
(PMID:12615897)
GO_REF:0000033		 Ensembl
RGD
GO_Central		 PMID:12615897 GO_REF:0000033 GO_REF:0000107 NCBI chr17:79,684,988...79,718,399
Ensembl chr17:74,776,935...74,809,186 		JBrowse link
G Ercc4 ERCC excision repair 4, endonuclease catalytic subunit involved_in ISO UniProtKB:Q15554 (PMID:14690602), (PMID:17055345) RGD PMID:14690602 PMID:17055345 NCBI chr10:2,926,085...2,958,176
Ensembl chr10:2,419,038...2,448,369
Ensembl chr10:2,419,038...2,448,369 		JBrowse link
G Fbxo4 F-box protein 4 involved_in ISO (PMID:16275645) RGD PMID:16275645 NCBI chr 2:53,174,798...53,187,792
Ensembl chr 2:53,174,798...53,187,792 		JBrowse link
G Hspa1a heat shock protein family A (Hsp70) member 1A acts_upstream_of_or_within ISO MGI:3028843 (PMID:14701760) RGD PMID:14701760 NCBI chr20:3,875,411...3,877,866
Ensembl chr20:3,856,006...3,873,227 		JBrowse link
G Hus1 HUS1 checkpoint clamp component involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr14:83,688,702...83,703,466
Ensembl chr14:83,688,708...83,703,442 		JBrowse link
G Ino80 INO80 complex ATPase subunit involved_in ISO (PMID:23979016) RGD PMID:23979016 NCBI chr 3:106,368,455...106,465,716
Ensembl chr 3:106,368,455...106,467,911 		JBrowse link
G Ino80b INO80 complex subunit B involved_in ISO (PMID:23979016) RGD PMID:23979016 NCBI chr 4:115,627,907...115,631,069
Ensembl chr 4:115,627,908...115,631,456 		JBrowse link
G Ino80c INO80 complex subunit C involved_in ISO (PMID:23979016) RGD PMID:23979016 NCBI chr18:15,378,764...15,398,574
Ensembl chr18:15,378,770...15,393,403 		JBrowse link
G Ino80d INO80 complex subunit D involved_in ISO (PMID:23979016) RGD PMID:23979016 NCBI chr 9:64,447,075...64,514,013
Ensembl chr 9:64,457,165...64,515,242 		JBrowse link
G Lrrc34 leucine rich repeat containing 34 acts_upstream_of_or_within ISO MGI:101893 (PMID:34549596) RGD PMID:34549596 NCBI chr 2:112,752,294...112,774,463
Ensembl chr 2:112,754,578...112,774,459 		JBrowse link
G Lto1 LTO1 maturation factor of ABCE1 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr 1:200,074,247...200,080,951
Ensembl chr 1:200,074,253...200,088,061 		JBrowse link
G Mcrs1 microspherule protein 1 involved_in ISO (PMID:23979016) RGD PMID:23979016 NCBI chr 7:130,383,853...130,392,667
Ensembl chr 7:130,383,853...130,392,685 		JBrowse link
G Mre11 MRE11 homolog, double strand break repair nuclease involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr 8:19,900,211...19,961,906
Ensembl chr 8:11,632,354...11,678,279 		JBrowse link
G Nbn nibrin involved_in ISO
IEA
ISS		 (PMID:11448772)
GO_REF:0000002
GO_REF:0000024		 RGD
InterPro
UniProt		 PMID:11448772 GO_REF:0000002 GO_REF:0000024 NCBI chr 5:34,256,678...34,291,163
Ensembl chr 5:29,459,457...29,494,150 		JBrowse link
G Nfrkb nuclear factor related to kappa B binding protein involved_in ISO (PMID:23979016) RGD PMID:23979016 NCBI chr 8:29,831,802...29,863,360
Ensembl chr 8:29,831,812...29,863,359 		JBrowse link
G Nhej1 nonhomologous end-joining factor 1 involved_in ISS
ISO
IEA		 GO_REF:0000024
(PMID:28369633)
GO_REF:0000107		 UniProt
RGD
Ensembl		 PMID:28369633 GO_REF:0000024 GO_REF:0000107 NCBI chr 9:76,526,322...76,622,488
Ensembl chr 9:76,526,324...76,622,444 		JBrowse link
G Parp1 poly (ADP-ribose) polymerase 1 acts_upstream_of_or_within ISO MGI:1857862 (PMID:12707040) RGD PMID:12707040 NCBI chr13:94,839,484...94,871,295
Ensembl chr13:92,307,586...92,339,404 		JBrowse link
G Parp3 poly (ADP-ribose) polymerase family, member 3 acts_upstream_of_or_within ISO (PMID:21270334) RGD PMID:21270334 NCBI chr 8:115,989,721...115,995,822
Ensembl chr 8:107,111,012...107,116,782 		JBrowse link
G Pif1 PIF1 5'-to-3' DNA helicase involved_in IEA GO_REF:0000002 InterPro GO_REF:0000002 NCBI chr 8:66,110,641...66,120,202
Ensembl chr 8:66,111,072...66,120,200 		JBrowse link
G Pou5f1 POU class 5 homeobox 1 acts_upstream_of_or_within ISO MGI:1919077 (PMID:34549596) RGD PMID:34549596 NCBI chr20:3,227,836...3,232,598
Ensembl chr20:3,223,129...3,227,891 		JBrowse link
G Prkdc protein kinase, DNA-activated, catalytic subunit involved_in
acts_upstream_of_or_within		 IBA
ISO		 GO_REF:0000033
MGI:1857113 (PMID:15010310)		 GO_Central
RGD		 PMID:15010310 GO_REF:0000033 NCBI chr11:98,544,952...98,762,499
Ensembl chr11:85,040,792...85,257,952 		JBrowse link
G Rad50 RAD50 double strand break repair protein involved_in TAS
IEA		 GO_REF:0000002 InterPro
RGD		 PMID:10908350 GO_REF:0000002, RGD:68816 NCBI chr10:38,310,147...38,362,100
Ensembl chr10:37,808,726...37,861,396 		JBrowse link
G Rad51d RAD51 paralog D involved_in ISO (PMID:15109494)
UniProtKB:P02340 (PMID:15109494)		 RGD PMID:15109494 NCBI chr10:68,303,350...68,322,002
Ensembl chr10:67,740,712...67,824,434 		JBrowse link
G Recql4 RecQ like helicase 4 involved_in ISO
IBA		 (PMID:22039056)
GO_REF:0000033		 RGD
GO_Central		 PMID:22039056 GO_REF:0000033 NCBI chr 7:110,304,092...110,311,426
Ensembl chr 7:108,423,455...108,430,619 		JBrowse link
G RFFL ring finger and FYVE like domain containing E3 ubiquitin protein ligase involved_in IEA
ISO
IBA		 UniProtKB:P02340 (PMID:15109494) Ensembl
RGD
GO_Central		 PMID:15109494 GO_REF:0000033 GO_REF:0000107
G Rif1 replication timing regulatory factor 1 involved_in IBA
ISO		 GO_REF:0000033
(PMID:24735877)		 GO_Central
RGD		 PMID:24735877 GO_REF:0000033 NCBI chr 3:36,554,689...36,607,961
Ensembl chr 3:36,554,697...36,603,617 		JBrowse link
G Rpa1 replication protein A1 involved_in ISO (PMID:17959650) RGD PMID:17959650 NCBI chr10:60,148,869...60,199,970
Ensembl chr10:60,148,793...60,199,949 		JBrowse link
G Rpa2 replication protein A2 involved_in ISS
ISO		 GO_REF:0000024
(PMID:17959650)		 UniProt
RGD		 PMID:17959650 GO_REF:0000024 NCBI chr 5:144,976,789...144,989,445
Ensembl chr 5:144,976,748...144,987,350 		JBrowse link
G Rtel1 regulator of telomere elongation helicase 1 involved_in
acts_upstream_of_or_within		 ISO
IEA
ISS		 (PMID:23453664)
GO_REF:0000104
MGI:3052235 (PMID:15210109)
GO_REF:0000024		 RGD
UniProt		 PMID:15210109 PMID:23453664 GO_REF:0000024 GO_REF:0000104 NCBI chr 3:168,427,247...168,465,349
Ensembl chr 3:168,419,579...168,465,348 		JBrowse link
G Ruvbl1 RuvB-like AAA ATPase 1 involved_in ISO (PMID:23979016) RGD PMID:23979016 NCBI chr 4:120,932,486...120,967,400
Ensembl chr 4:120,932,417...121,029,384 		JBrowse link
G Ruvbl2 RuvB-like AAA ATPase 2 involved_in ISO (PMID:23979016) RGD PMID:23979016 NCBI chr 1:95,902,014...95,915,247
Ensembl chr 1:95,901,701...95,915,342 		JBrowse link
G Sp100 SP100 nuclear antigen involved_in ISO (PMID:15767676) RGD PMID:15767676 NCBI chr 9:93,758,975...93,825,068
Ensembl chr 9:86,311,032...86,377,034 		JBrowse link
G Stn1 STN1 subunit of CST complex involved_in ISS
ISO		 GO_REF:0000024
(PMID:19854130)		 UniProt
RGD		 PMID:19854130 GO_REF:0000024 NCBI chr 1:256,336,916...256,371,143
Ensembl chr 1:246,395,613...246,429,531 		JBrowse link
G Terc telomerase RNA component acts_upstream_of_or_within ISO MGI:109635|MGI:1328362|MGI:1857930 (PMID:15235603), (PMID:15367665), (PMID:17145779) RGD PMID:15235603 PMID:15367665 PMID:17145779 NCBI chr 2:114,744,148...114,744,535 JBrowse link
G Terf1 telomeric repeat binding factor 1 involved_in ISO (PMID:24415760) RGD PMID:24415760 NCBI chr 5:3,443,103...3,472,377
Ensembl chr 5:3,443,106...3,472,340 		JBrowse link
G Terf2 telomeric repeat binding factor 2 involved_in
acts_upstream_of
acts_upstream_of_or_within		 ISO (PMID:20655466), (PMID:28216226)
MGI:3619525 (PMID:15968270)
(PMID:15010310)		 RGD PMID:15010310 PMID:15968270 PMID:20655466 PMID:28216226 NCBI chr19:34,976,963...35,005,813
Ensembl chr19:34,977,471...35,005,819 		JBrowse link
G Tert telomerase reverse transcriptase involved_in IEA GO_REF:0000002 InterPro GO_REF:0000002 NCBI chr 1:31,465,766...31,488,650
Ensembl chr 1:29,637,506...29,659,561 		JBrowse link
G Tfpt TCF3 fusion partner involved_in IEA
ISO		 GO_REF:0000107
(PMID:23979016)		 Ensembl
RGD		 PMID:23979016 GO_REF:0000107 NCBI chr 1:65,587,633...65,597,407
Ensembl chr 1:65,582,359...65,611,689 		JBrowse link
G Tnks2 tankyrase 2 NOT|acts_upstream_of_or_within ISO MGI:3621819|MGI:3621924 (PMID:16507984), (PMID:16507985) RGD PMID:16507984 PMID:16507985 NCBI chr 1:234,567,888...234,621,079
Ensembl chr 1:234,567,858...234,621,079 		JBrowse link
G Uchl5 ubiquitin C-terminal hydrolase L5 involved_in ISO (PMID:23979016) RGD PMID:23979016 NCBI chr13:58,070,947...58,106,825
Ensembl chr13:55,520,729...55,556,502 		JBrowse link
G Wrn WRN RecQ like helicase involved_in
acts_upstream_of_or_within		 IBA
ISO		 GO_REF:0000033
(PMID:11735402), (PMID:18212065)
MGI:109558|MGI:1328362|MGI:2156622 (PMID:12707040), (PMID:15235603), (PMID:15367665)		 GO_Central
RGD		 PMID:11735402 PMID:12707040 PMID:15235603 PMID:15367665 PMID:18212065 GO_REF:0000033 NCBI chr16:65,466,552...65,602,951
Ensembl chr16:58,763,504...58,895,450 		JBrowse link
G Xrcc5 X-ray repair cross complementing 5 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr 9:73,955,216...74,044,020
Ensembl chr 9:73,955,216...74,044,018 		JBrowse link
G Xrcc6 X-ray repair cross complementing 6 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr 7:113,542,992...113,563,762
Ensembl chr 7:113,543,057...113,563,762 		JBrowse link
G Yy1 YY1 transcription factor involved_in ISO (PMID:23979016) RGD PMID:23979016 NCBI chr 6:133,471,615...133,500,875
Ensembl chr 6:127,707,596...127,732,747 		JBrowse link
G Zfp365 zinc finger protein 365 involved_in ISS
ISO
IBA
IEA		 GO_REF:0000024
(PMID:23776040)
GO_REF:0000033
GO_REF:0000107		 UniProt
RGD
GO_Central
Ensembl		 PMID:23776040 GO_REF:0000024 GO_REF:0000033 GO_REF:0000107 NCBI chr20:20,666,240...20,689,734
Ensembl chr20:20,666,240...20,691,238 		JBrowse link
G Zfp827 zinc finger protein 827 involved_in ISO (PMID:25150861) RGD PMID:25150861 NCBI chr19:28,720,568...28,887,381
Ensembl chr19:28,721,021...28,887,191 		JBrowse link
telomere maintenance in response to DNA damage term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Cdk2 cyclin dependent kinase 2 involved_in ISO
IEA		 (PMID:28216226)
GO_REF:0000107		 RGD
Ensembl		 PMID:28216226 GO_REF:0000107 NCBI chr 7:1,714,392...1,721,964
Ensembl chr 7:1,129,811...1,137,403 		JBrowse link
G Nbn nibrin involved_in ISS
ISO		 GO_REF:0000024
(PMID:28216226)		 UniProt
RGD		 PMID:28216226 GO_REF:0000024 NCBI chr 5:34,256,678...34,291,163
Ensembl chr 5:29,459,457...29,494,150 		JBrowse link
G Ppp1ca protein phosphatase 1 catalytic subunit alpha involved_in ISO (PMID:28216226) RGD PMID:28216226 NCBI chr 1:201,485,117...201,488,734
Ensembl chr 1:201,485,085...201,497,327 		JBrowse link
G Rif1 replication timing regulatory factor 1 involved_in ISO (PMID:15583028) RGD PMID:15583028 NCBI chr 3:36,554,689...36,607,961
Ensembl chr 3:36,554,697...36,603,617 		JBrowse link
G Rtel1 regulator of telomere elongation helicase 1 involved_in ISO (PMID:22579284) RGD PMID:22579284 NCBI chr 3:168,427,247...168,465,349
Ensembl chr 3:168,419,579...168,465,348 		JBrowse link
telomere maintenance via base-excision repair term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Apex1 apurinic/apyrimidinic endodeoxyribonuclease 1 involved_in ISO
IEA		 (PMID:24703901)
GO_REF:0000107		 RGD
Ensembl		 PMID:24703901 GO_REF:0000107 NCBI chr15:26,618,146...26,620,330
Ensembl chr15:24,144,362...24,146,785 		JBrowse link
telomere maintenance via recombination term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Brca2 BRCA2, DNA repair associated involved_in IEA
ISO		 GO_REF:0000107
UniProtKB:Q13207 (PMID:21076401)		 Ensembl
RGD		 PMID:21076401 GO_REF:0000107 NCBI chr12:4,895,092...4,939,340
Ensembl chr12:59,819...100,567 		JBrowse link
G Nsmce2 NSE2/MMS21 homolog, SMC5-SMC6 complex SUMO ligase involved_in ISO
IEA
ISS		 (PMID:17589526)
GO_REF:0000107
GO_REF:0000024		 RGD
Ensembl
UniProt		 PMID:17589526 GO_REF:0000024 GO_REF:0000107 NCBI chr 7:90,936,112...91,173,435
Ensembl chr 7:90,936,112...91,164,899 		JBrowse link
G Rad50 RAD50 double strand break repair protein involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr10:38,310,147...38,362,100
Ensembl chr10:37,808,726...37,861,396 		JBrowse link
G Rad51 RAD51 recombinase involved_in ISO UniProtKB:P02340 (PMID:21076401) RGD PMID:21076401 NCBI chr 3:126,554,210...126,578,888
Ensembl chr 3:106,100,381...106,125,035 		JBrowse link
G Rad51c RAD51 paralog C involved_in ISO UniProtKB:P02340 (PMID:21076401) RGD PMID:21076401 NCBI chr10:72,702,299...72,728,980
Ensembl chr10:72,205,032...72,231,248 		JBrowse link
G Rad51d RAD51 paralog D involved_in ISO (PMID:15109494) RGD PMID:15109494 NCBI chr10:68,303,350...68,322,002
Ensembl chr10:67,740,712...67,824,434 		JBrowse link
G RFFL ring finger and FYVE like domain containing E3 ubiquitin protein ligase involved_in IEA Ensembl GO_REF:0000107
G Smc5 structural maintenance of chromosomes 5 involved_in ISO (PMID:17589526) RGD PMID:17589526 NCBI chr 1:220,769,366...220,839,138
Ensembl chr 1:220,769,366...220,839,096 		JBrowse link
G Smc6 structural maintenance of chromosomes 6 involved_in ISO (PMID:17589526) RGD PMID:17589526 NCBI chr 6:33,978,730...34,033,201
Ensembl chr 6:33,978,716...34,031,746 		JBrowse link
G Tep1 telomerase associated protein 1 involved_in ISO
IBA
IEA		 (PMID:10810353)
GO_REF:0000033
GO_REF:0000107		 RGD
GO_Central
Ensembl		 PMID:10810353 GO_REF:0000033 GO_REF:0000107 NCBI chr15:24,045,876...24,093,526
Ensembl chr15:24,045,878...24,093,526 		JBrowse link
G Xrcc3 X-ray repair cross complementing 3 involved_in ISO
IBA		 (PMID:15507207)
GO_REF:0000033		 RGD
GO_Central		 PMID:15507207 GO_REF:0000033 NCBI chr 6:136,684,558...136,694,822
Ensembl chr 6:130,863,959...130,872,444 		JBrowse link
telomere maintenance via semi-conservative replication term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Upf1 UPF1, RNA helicase and ATPase involved_in ISO (PMID:21829167) RGD PMID:21829167 NCBI chr16:19,076,594...19,097,365
Ensembl chr16:19,076,322...19,096,568 		JBrowse link
telomere maintenance via telomerase term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Acd ACD, shelterin complex subunit and telomerase recruitment factor involved_in IEA
ISO		 GO_REF:0000107
(PMID:17237768)		 Ensembl
RGD		 PMID:17237768 GO_REF:0000107 NCBI chr19:33,586,739...33,589,481
Ensembl chr19:33,586,745...33,589,461 		JBrowse link
G Dkc1 dyskerin pseudouridine synthase 1 involved_in ISS
ISO		 GO_REF:0000024
GO:0090669 (PMID:26950371), (PMID:29695869)		 UniProt
RGD		 PMID:26950371 PMID:29695869 GO_REF:0000024
G Gar1 GAR1 ribonucleoprotein involved_in ISS
IEA
ISO		 GO_REF:0000024
GO_REF:0000107
(PMID:29695869)		 UniProt
Ensembl
RGD		 PMID:29695869 GO_REF:0000024 GO_REF:0000107 NCBI chr 2:218,375,231...218,382,509
Ensembl chr 2:218,375,353...218,382,524 		JBrowse link
G Hmbox1 homeobox containing 1 involved_in ISO (PMID:23685356) RGD PMID:23685356 NCBI chr15:39,067,805...39,200,633
Ensembl chr15:39,067,804...39,200,323 		JBrowse link
G Hsp90aa1 heat shock protein 90 alpha family class A member 1 acts_upstream_of_positive_effect ISO (PMID:10197982) RGD PMID:10197982 NCBI chr 6:135,523,604...135,529,687
Ensembl chr 6:129,702,383...129,707,268 		JBrowse link
G Hsp90ab1 heat shock protein 90 alpha family class B member 1 involved_in
acts_upstream_of_positive_effect		 IEA
ISO		 GO_REF:0000107
(PMID:10197982)		 Ensembl
RGD		 PMID:10197982 GO_REF:0000107 NCBI chr 9:22,930,249...22,935,929
Ensembl chr 9:15,433,691...15,438,488 		JBrowse link
G Nhp2 NHP2 ribonucleoprotein involved_in ISO (PMID:29695869) RGD PMID:29695869 NCBI chr10:35,877,057...35,880,399
Ensembl chr10:35,877,054...35,882,545 		JBrowse link
G Nop10 NOP10 ribonucleoprotein involved_in ISO (PMID:29695869) RGD PMID:29695869 NCBI chr 3:99,066,857...99,067,942
Ensembl chr 3:99,066,857...99,067,942 		JBrowse link
G Parp4 poly (ADP-ribose) polymerase family, member 4 NOT|acts_upstream_of_or_within ISO MGI:109573 (PMID:15169895) RGD PMID:15169895 NCBI chr15:30,690,503...30,792,868
Ensembl chr15:30,686,613...30,828,810 		JBrowse link
G Pinx1 PIN2/TERF1 interacting, telomerase inhibitor 1 acts_upstream_of_or_within
involved_in		 ISO
IEA		 (PMID:11701125)
GO_REF:0000107		 RGD
Ensembl		 PMID:11701125 GO_REF:0000107 NCBI chr15:38,097,896...38,157,143
Ensembl chr15:38,097,886...38,157,140 		JBrowse link
G Pot1 protection of telomeres 1 involved_in ISO (PMID:12768206), (PMID:16043710), (PMID:27013236), (PMID:30586141), (PMID:35420632), (PMID:37140166) RGD PMID:12768206 PMID:16043710 PMID:27013236 PMID:30586141 PMID:35420632 More... NCBI chr 4:55,170,821...55,228,588
Ensembl chr 4:54,205,332...54,263,042 		JBrowse link
G Ptges3 prostaglandin E synthase 3 involved_in
acts_upstream_of_positive_effect		 IEA
ISO
IBA		 GO_REF:0000107
(PMID:10197982)
GO_REF:0000033		 Ensembl
RGD
GO_Central		 PMID:10197982 GO_REF:0000033 GO_REF:0000107 NCBI chr 7:490,698...507,759
Ensembl chr 7:490,656...508,084 		JBrowse link
G Ptges3l1 prostaglandin E synthase 3-like 1 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr  X:42,215,200...42,224,472
Ensembl chr  X:42,214,756...42,225,047 		JBrowse link
G Rad50 RAD50 double strand break repair protein involved_in ISO
IBA
IEA
ISS		 (PMID:9705271)
GO_REF:0000033
GO_REF:0000107
GO_REF:0000024		 RGD
GO_Central
Ensembl
UniProt		 PMID:9705271 GO_REF:0000024 GO_REF:0000033 GO_REF:0000107 NCBI chr10:38,310,147...38,362,100
Ensembl chr10:37,808,726...37,861,396 		JBrowse link
G Rpa1 replication protein A1 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr10:60,148,869...60,199,970
Ensembl chr10:60,148,793...60,199,949 		JBrowse link
G Tep1 telomerase associated protein 1 NOT|acts_upstream_of_or_within ISO MGI:2685589 (PMID:15169895) RGD PMID:15169895 NCBI chr15:24,045,876...24,093,526
Ensembl chr15:24,045,878...24,093,526 		JBrowse link
G Terc telomerase RNA component acts_upstream_of
involved_in		 TAS
ISO		 MGI:1857930 (PMID:17982445)
(PMID:17940095), (PMID:19701182), (PMID:9443919)		 RGD PMID:9443919 PMID:17940095 PMID:17982445 PMID:19701182 PMID:10423530 RGD:1299555 NCBI chr 2:114,744,148...114,744,535 JBrowse link
G Terf1 telomeric repeat binding factor 1 involved_in ISO (PMID:9034193)
(PMID:23685356)		 RGD PMID:9034193 PMID:23685356 NCBI chr 5:3,443,103...3,472,377
Ensembl chr 5:3,443,106...3,472,340 		JBrowse link
G Tert telomerase reverse transcriptase involved_in ISO
IBA
ISS		 (PMID:16043710), (PMID:17940095), (PMID:19701182), (PMID:21531765), (PMID:29695869), (PMID:9443919), (PMID:9454332)
GO_REF:0000033
GO_REF:0000024		 RGD
GO_Central
UniProt		 PMID:9443919 PMID:9454332 PMID:16043710 PMID:17940095 PMID:19701182 More... GO_REF:0000024 GO_REF:0000033 NCBI chr 1:31,465,766...31,488,650
Ensembl chr 1:29,637,506...29,659,561 		JBrowse link
G Wrap53 WD repeat containing, antisense to TP53 involved_in ISS
ISO		 GO_REF:0000024
(PMID:29695869), (PMID:29804836)		 UniProt
RGD		 PMID:29695869 PMID:29804836 GO_REF:0000024 NCBI chr10:54,780,873...54,797,919
Ensembl chr10:54,282,105...54,298,929 		JBrowse link
G Xrcc5 X-ray repair cross complementing 5 involved_in ISO (PMID:19188702) RGD PMID:19188702 NCBI chr 9:73,955,216...74,044,020
Ensembl chr 9:73,955,216...74,044,018 		JBrowse link
telomere maintenance via telomere lengthening term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ctc1 CST telomere replication complex component 1 involved_in
acts_upstream_of_or_within		 IBA
ISO		 GO_REF:0000033
MGI:5427642 (PMID:22531781)		 GO_Central
RGD		 PMID:22531781 GO_REF:0000033 NCBI chr10:53,714,614...53,735,298
Ensembl chr10:53,714,644...53,735,298 		JBrowse link
G Dclre1b DNA cross-link repair 1B involved_in IEA
ISO		 GO_REF:0000107
(PMID:20479256)		 Ensembl
RGD		 PMID:20479256 GO_REF:0000107 NCBI chr 2:191,309,909...191,318,399
Ensembl chr 2:191,309,913...191,318,423 		JBrowse link
G Rad51 RAD51 recombinase involved_in ISO UniProtKB:P02340 (PMID:21076401) RGD PMID:21076401 NCBI chr 3:126,554,210...126,578,888
Ensembl chr 3:106,100,381...106,125,035 		JBrowse link
G Slx1b SLX1 homolog B, structure-specific endonuclease subunit involved_in ISO (PMID:24012755) RGD PMID:24012755 NCBI chr 1:181,286,190...181,291,739
Ensembl chr 1:181,283,921...181,291,775 		JBrowse link
G Stn1 STN1 subunit of CST complex involved_in IEA
IBA
ISS
ISO		 GO_REF:0000104
GO_REF:0000033
GO_REF:0000024
(PMID:19648609)		 UniProt
GO_Central
RGD		 PMID:19648609 GO_REF:0000024 GO_REF:0000033 GO_REF:0000104 NCBI chr 1:256,336,916...256,371,143
Ensembl chr 1:246,395,613...246,429,531 		JBrowse link
G Terf2ip TERF2 interacting protein involved_in ISS
ISO
IBA
IEA		 GO_REF:0000024
(PMID:20339076), (PMID:20622869)
GO_REF:0000033
GO_REF:0000104		 UniProt
RGD
GO_Central		 PMID:20339076 PMID:20622869 GO_REF:0000024 GO_REF:0000033 GO_REF:0000104 NCBI chr19:39,976,965...39,984,055
Ensembl chr19:39,976,906...39,984,064 		JBrowse link
G Zbtb48 zinc finger and BTB domain containing 48 involved_in ISO (PMID:28082411), (PMID:28500257) RGD PMID:28082411 PMID:28500257 NCBI chr 5:162,525,234...162,533,604
Ensembl chr 5:162,525,235...162,533,585 		JBrowse link
telomere maintenance via telomere trimming term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Nbn nibrin involved_in ISO UniProtKB:O43542 (PMID:27918544) RGD PMID:27918544 NCBI chr 5:34,256,678...34,291,163
Ensembl chr 5:29,459,457...29,494,150 		JBrowse link
G Xrcc3 X-ray repair cross complementing 3 involved_in ISO UniProtKB:O60934 (PMID:27918544) RGD PMID:27918544 NCBI chr 6:136,684,558...136,694,822
Ensembl chr 6:130,863,959...130,872,444 		JBrowse link
telomeric 3' overhang formation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Dclre1b DNA cross-link repair 1B involved_in IEA
ISO
ISS		 GO_REF:0000107
(PMID:20551906), (PMID:20619712)
GO_REF:0000024		 Ensembl
RGD
UniProt		 PMID:20551906 PMID:20619712 GO_REF:0000024 GO_REF:0000107 NCBI chr 2:191,309,909...191,318,399
Ensembl chr 2:191,309,913...191,318,423 		JBrowse link
G Mre11 MRE11 homolog, double strand break repair nuclease involved_in ISO
IEA		 (PMID:16374507)
GO_REF:0000107		 RGD
Ensembl		 PMID:16374507 GO_REF:0000107 NCBI chr 8:19,900,211...19,961,906
Ensembl chr 8:11,632,354...11,678,279 		JBrowse link
G Nbn nibrin involved_in ISO
IEA		 (PMID:16374507)
GO_REF:0000107		 RGD
Ensembl		 PMID:16374507 GO_REF:0000107 NCBI chr 5:34,256,678...34,291,163
Ensembl chr 5:29,459,457...29,494,150 		JBrowse link
G Rad50 RAD50 double strand break repair protein involved_in ISO
IEA		 (PMID:16374507)
GO_REF:0000107		 RGD
Ensembl		 PMID:16374507 GO_REF:0000107 NCBI chr10:38,310,147...38,362,100
Ensembl chr10:37,808,726...37,861,396 		JBrowse link
telomeric D-loop disassembly term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Blm BLM RecQ like helicase involved_in ISO (PMID:16030011), (PMID:19734539) RGD PMID:16030011 PMID:19734539 NCBI chr 1:143,819,072...143,905,300
Ensembl chr 1:134,409,857...134,484,312 		JBrowse link
G Pot1 protection of telomeres 1 involved_in ISO UniProtKB:O94761 (PMID:22039056) RGD PMID:22039056 NCBI chr 4:55,170,821...55,228,588
Ensembl chr 4:54,205,332...54,263,042 		JBrowse link
G Recql4 RecQ like helicase 4 involved_in ISO UniProtKB:P54274|UniProtKB:Q14191|UniProtKB:Q15554|UniProtKB:Q9NUX5 (PMID:22039056) RGD PMID:22039056 NCBI chr 7:110,304,092...110,311,426
Ensembl chr 7:108,423,455...108,430,619 		JBrowse link
G Slx1b SLX1 homolog B, structure-specific endonuclease subunit involved_in ISO (PMID:24012755) RGD PMID:24012755 NCBI chr 1:181,286,190...181,291,739
Ensembl chr 1:181,283,921...181,291,775 		JBrowse link
G Slx4 SLX4 structure-specific endonuclease subunit involved_in ISO (PMID:24012755) RGD PMID:24012755 NCBI chr10:11,526,623...11,549,313
Ensembl chr10:11,528,424...11,549,295 		JBrowse link
G Terf1 telomeric repeat binding factor 1 involved_in ISO UniProtKB:O94761 (PMID:22039056) RGD PMID:22039056 NCBI chr 5:3,443,103...3,472,377
Ensembl chr 5:3,443,106...3,472,340 		JBrowse link
G Terf2 telomeric repeat binding factor 2 involved_in ISO
IBA		 UniProtKB:O94761 (PMID:22039056)
GO_REF:0000033		 RGD
GO_Central		 PMID:22039056 GO_REF:0000033 NCBI chr19:34,976,963...35,005,813
Ensembl chr19:34,977,471...35,005,819 		JBrowse link
G Wrn WRN RecQ like helicase involved_in ISO UniProtKB:O94761 (PMID:15200954), (PMID:16030011), (PMID:19734539), (PMID:22039056), (PMID:26420422) RGD PMID:15200954 PMID:16030011 PMID:19734539 PMID:22039056 PMID:26420422 NCBI chr16:65,466,552...65,602,951
Ensembl chr16:58,763,504...58,895,450 		JBrowse link
telomeric DNA-containing double minutes formation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ercc1 ERCC excision repair 1, endonuclease non-catalytic subunit involved_in ISO (PMID:14690602) RGD PMID:14690602 NCBI chr 1:88,099,308...88,135,966
Ensembl chr 1:78,996,390...79,007,963 		JBrowse link
G Ercc4 ERCC excision repair 4, endonuclease catalytic subunit involved_in ISO (PMID:14690602) RGD PMID:14690602 NCBI chr10:2,926,085...2,958,176
Ensembl chr10:2,419,038...2,448,369
Ensembl chr10:2,419,038...2,448,369 		JBrowse link
G Xrcc1 X-ray repair cross complementing 1 involved_in ISO (PMID:14690602) RGD PMID:14690602 NCBI chr 1:89,268,721...89,296,619
Ensembl chr 1:80,141,207...80,168,701 		JBrowse link
G Xrcc4 X-ray repair cross complementing 4 involved_in ISO (PMID:14690602) RGD PMID:14690602 NCBI chr 2:20,948,464...21,197,705
Ensembl chr 2:20,951,200...21,197,808 		JBrowse link
telomeric loop disassembly term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Rtel1 regulator of telomere elongation helicase 1 involved_in ISO
IBA		 (PMID:25620558)
(PMID:22579284), (PMID:24115439)
GO_REF:0000033		 RGD
GO_Central		 PMID:22579284 PMID:24115439 PMID:25620558 GO_REF:0000033 NCBI chr 3:168,427,247...168,465,349
Ensembl chr 3:168,419,579...168,465,348 		JBrowse link
telomeric loop formation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Dclre1b DNA cross-link repair 1B involved_in IEA
ISO
ISS		 GO_REF:0000107
(PMID:20619712)
GO_REF:0000024		 Ensembl
RGD
UniProt		 PMID:20619712 GO_REF:0000024 GO_REF:0000107 NCBI chr 2:191,309,909...191,318,399
Ensembl chr 2:191,309,913...191,318,423 		JBrowse link
G Pot1 protection of telomeres 1 NOT|involved_in ISO UniProtKB:H7BX60 (PMID:24120135) RGD PMID:24120135 NCBI chr 4:55,170,821...55,228,588
Ensembl chr 4:54,205,332...54,263,042 		JBrowse link
G Terf1 telomeric repeat binding factor 1 NOT|involved_in ISO (PMID:24120135) RGD PMID:24120135 NCBI chr 5:3,443,103...3,472,377
Ensembl chr 5:3,443,106...3,472,340 		JBrowse link
G Terf2 telomeric repeat binding factor 2 involved_in ISO
IBA		 (PMID:10338214)
(PMID:24120135)
GO_REF:0000033		 RGD
GO_Central		 PMID:10338214 PMID:24120135 GO_REF:0000033 NCBI chr19:34,976,963...35,005,813
Ensembl chr19:34,977,471...35,005,819 		JBrowse link
G Terf2ip TERF2 interacting protein NOT|involved_in ISO (PMID:24120135) RGD PMID:24120135 NCBI chr19:39,976,965...39,984,055
Ensembl chr19:39,976,906...39,984,064 		JBrowse link
transcription-coupled nucleotide-excision repair term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ercc2 ERCC excision repair 2, TFIIH core complex helicase subunit involved_in ISO (PMID:8663148) RGD PMID:8663148 NCBI chr 1:88,161,342...88,175,102
Ensembl chr 1:79,033,326...79,047,102 		JBrowse link
G Ercc3 ERCC excision repair 3, TFIIH core complex helicase subunit involved_in ISO (PMID:8663148) RGD PMID:8663148 NCBI chr18:24,157,831...24,188,543
Ensembl chr18:23,883,580...23,914,329 		JBrowse link
G Ercc5 ERCC excision repair 5, endonuclease involved_in ISO (PMID:16246722) RGD PMID:16246722 NCBI chr 9:53,801,471...53,846,611
Ensembl chr 9:46,309,389...46,354,472 		JBrowse link
G Ercc6 ERCC excision repair 6, chromatin remodeling factor acts_upstream_of_or_within
involved_in		 IMP
ISO
IBA		 MGI:1932102 (PMID:12509265), (PMID:9150142)
GO_REF:0000033
(PMID:10564257), (PMID:26620705)		 RGD
GO_Central		 PMID:9150142 PMID:10564257 PMID:12509265 PMID:26620705 PMID:31644904 GO_REF:0000033, RGD:126925983 NCBI chr16:7,771,311...7,841,895
Ensembl chr16:7,765,013...7,835,587 		JBrowse link
G Ercc8 ERCC excision repair 8, CSA ubiquitin ligase complex subunit acts_upstream_of_or_within ISO (PMID:12732143) RGD PMID:12732143 NCBI chr 2:41,380,901...41,418,294
Ensembl chr 2:39,647,452...39,684,859 		JBrowse link
G Hmgn1 high mobility group nucleosome binding domain 1 acts_upstream_of_or_within ISO MGI:3590648 (PMID:12660172) RGD PMID:12660172 NCBI chr11:35,422,328...35,428,247
Ensembl chr11:35,422,328...35,428,254 		JBrowse link
G Polr2i RNA polymerase II subunit I involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr 1:94,610,976...94,612,413
Ensembl chr 1:85,483,515...85,484,952 		JBrowse link
G Usp7 ubiquitin specific peptidase 7 involved_in ISS
IEA
ISO		 GO_REF:0000024
GO_REF:0000107
(PMID:22466612)		 UniProt
Ensembl
RGD		 PMID:22466612 GO_REF:0000024 GO_REF:0000107 NCBI chr10:6,880,684...6,925,355
Ensembl chr10:6,828,795...6,925,355 		JBrowse link
G Uvssa UV-stimulated scaffold protein A involved_in ISO
IBA
IEA
ISS		 (PMID:22466610), (PMID:22466611), (PMID:22466612)
GO_REF:0000033
GO_REF:0000107
GO_REF:0000024		 RGD
GO_Central
Ensembl
UniProt		 PMID:22466610 PMID:22466611 PMID:22466612 GO_REF:0000024 GO_REF:0000033 GO_REF:0000107 NCBI chr14:77,309,188...77,351,922
Ensembl chr14:77,314,056...77,351,903 		JBrowse link
G Xab2 XPA binding protein 2 involved_in ISO
IEA
ISS		 (PMID:10944529)
GO_REF:0000107		 RGD
Ensembl		 PMID:10944529 PMID:10944529 GO_REF:0000107, RGD:8554289 NCBI chr12:1,667,672...1,679,702
Ensembl chr12:1,667,672...1,679,692 		JBrowse link
translesion synthesis term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Dtl denticleless E3 ubiquitin protein ligase homolog involved_in ISO (PMID:20129063) RGD PMID:20129063 NCBI chr13:103,115,810...103,155,029
Ensembl chr13:103,117,186...103,154,890 		JBrowse link
G Faap20 FA core complex associated protein 20 involved_in ISO
ISS		 (PMID:22266823)
GO_REF:0000024		 RGD
UniProt		 PMID:22266823 GO_REF:0000024 NCBI chr 5:165,808,370...165,815,291
Ensembl chr 5:165,808,657...165,815,333 		JBrowse link
G Parp10 poly (ADP-ribose) polymerase family, member 10 involved_in ISO (PMID:24695737) RGD PMID:24695737 NCBI chr 7:107,949,031...107,958,377
Ensembl chr 7:107,949,043...107,958,304 		JBrowse link
G Pclaf PCNA clamp associated factor involved_in ISO
IBA
ISS		 (PMID:23000965)
GO_REF:0000033
GO_REF:0000024		 RGD
GO_Central
UniProt		 PMID:23000965 GO_REF:0000024 GO_REF:0000033 NCBI chr 8:66,420,606...66,432,994
Ensembl chr 8:66,420,587...66,432,994
Ensembl chr 8:66,420,587...66,432,994 		JBrowse link
G Pcna proliferating cell nuclear antigen involved_in ISO
IBA
ISS		 (PMID:20129063)
GO_REF:0000033
GO_REF:0000024		 RGD
GO_Central
UniProt		 PMID:20129063 GO_REF:0000024 GO_REF:0000033 NCBI chr 3:119,499,039...119,502,911
Ensembl chr 3:119,498,810...119,502,995 		JBrowse link
G Poli DNA polymerase iota involved_in
acts_upstream_of_or_within		 IBA
ISO		 GO_REF:0000033
MGI:3055735 (PMID:17114294)		 GO_Central
RGD		 PMID:17114294 GO_REF:0000033 NCBI chr18:64,116,774...64,134,373
Ensembl chr18:64,116,774...64,163,418 		JBrowse link
G Poln DNA polymerase nu involved_in ISO (PMID:19908865), (PMID:20102227) RGD PMID:19908865 PMID:20102227 NCBI chr14:76,579,983...76,752,460
Ensembl chr14:76,580,546...76,752,463 		JBrowse link
G Primpol primase and DNA directed polymerase involved_in ISO
IBA		 (PMID:24240614), (PMID:24267451)
GO_REF:0000033		 RGD
GO_Central		 PMID:24240614 PMID:24267451 GO_REF:0000033 NCBI chr16:45,681,252...45,715,758
Ensembl chr16:45,681,326...45,715,565 		JBrowse link
G Sprtn SprT-like N-terminal domain involved_in IEA
ISS
ISO		 GO_REF:0000107
GO_REF:0000024
(PMID:22681887), (PMID:22902628), (PMID:23042605), (PMID:23042607)		 Ensembl
UniProt
RGD		 PMID:22681887 PMID:22902628 PMID:23042605 PMID:23042607 GO_REF:0000024 GO_REF:0000107 NCBI chr19:52,857,612...52,864,864
Ensembl chr19:52,857,866...52,864,864 		JBrowse link
G Vcp valosin-containing protein involved_in ISO
ISS		 (PMID:23042605)
GO_REF:0000024		 RGD
UniProt		 PMID:23042605 GO_REF:0000024 NCBI chr 5:62,005,984...62,025,387
Ensembl chr 5:57,210,168...57,229,571 		JBrowse link
G Zbtb1 zinc finger and BTB domain containing 1 involved_in ISO (PMID:24657165) RGD PMID:24657165 NCBI chr 6:95,096,838...95,125,811
Ensembl chr 6:95,096,387...95,118,996 		JBrowse link
UV-damage excision repair term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Actr5 actin related protein 5 involved_in ISO (PMID:20855601) RGD PMID:20855601 NCBI chr 3:147,282,461...147,295,870
Ensembl chr 3:147,282,624...147,296,110 		JBrowse link
G Cul4b cullin 4B involved_in ISO (PMID:22334663) RGD PMID:22334663 NCBI chr  X:117,287,481...117,326,688
Ensembl chr  X:117,287,484...117,326,688 		JBrowse link
G Ddb1 damage-specific DNA binding protein 1 involved_in IEA
ISO		 GO_REF:0000107
(PMID:14751237), (PMID:22334663)		 Ensembl
RGD		 PMID:14751237 PMID:22334663 GO_REF:0000107 NCBI chr 1:207,252,890...207,278,685
Ensembl chr 1:207,252,890...207,278,676 		JBrowse link
G Ddb2 damage specific DNA binding protein 2 involved_in ISO (PMID:14751237), (PMID:22334663) RGD PMID:14751237 PMID:22334663 NCBI chr 3:97,640,923...97,667,617
Ensembl chr 3:77,185,109...77,207,631 		JBrowse link
G Ercc1 ERCC excision repair 1, endonuclease non-catalytic subunit involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr 1:88,099,308...88,135,966
Ensembl chr 1:78,996,390...79,007,963 		JBrowse link
G H2ac25 H2A clustered histone 25 involved_in ISO (PMID:22334663) RGD PMID:22334663 NCBI chr10:44,233,283...44,234,835
Ensembl chr10:43,733,668...43,744,874 		JBrowse link
G Ino80 INO80 complex ATPase subunit involved_in ISO (PMID:20855601) RGD PMID:20855601 NCBI chr 3:106,368,455...106,465,716
Ensembl chr 3:106,368,455...106,467,911 		JBrowse link
G Mc1r melanocortin 1 receptor involved_in ISO (PMID:18292087) RGD PMID:18292087 NCBI chr19:51,452,448...51,455,375
Ensembl chr19:51,453,239...51,454,192 		JBrowse link
G Sirt1 sirtuin 1 involved_in ISO
IEA		 (PMID:20670893)
GO_REF:0000107		 RGD
Ensembl		 PMID:20670893 GO_REF:0000107 NCBI chr20:25,305,953...25,328,000
Ensembl chr20:25,306,917...25,329,260 		JBrowse link
G Trim17 tripartite motif-containing 17 involved_in IEA GO_REF:0000107 Ensembl GO_REF:0000107 NCBI chr10:43,743,111...43,750,929
Ensembl chr10:43,740,604...43,750,919 		JBrowse link
G Xpa XPA, DNA damage recognition and repair factor involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr 5:65,227,281...65,275,784
Ensembl chr 5:60,431,673...60,475,726 		JBrowse link
G Xpc XPC complex subunit, DNA damage recognition and repair factor involved_in ISO (PMID:8077226)
(PMID:22431748)		 RGD PMID:8077226 PMID:22431748 NCBI chr 4:125,550,833...125,578,084
Ensembl chr 4:123,993,666...124,021,010 		JBrowse link
V(D)J recombination term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Atm ATM serine/threonine kinase acts_upstream_of_or_within ISO MGI:104779 (PMID:23836881) RGD PMID:23836881 NCBI chr 8:62,724,939...62,829,040
Ensembl chr 8:53,831,093...53,932,437 		JBrowse link
G Dcaf1 DDB1 and CUL4 associated factor 1 involved_in ISO (PMID:22157821) RGD PMID:22157821 NCBI chr 8:107,466,229...107,540,633
Ensembl chr 8:107,474,312...107,540,627 		JBrowse link
G Dclre1c DNA cross-link repair 1C involved_in
acts_upstream_of_or_within		 IEA
ISO		 GO_REF:0000107
(PMID:23836881)		 Ensembl
RGD		 PMID:23836881 GO_REF:0000107 NCBI chr17:79,684,988...79,718,399
Ensembl chr17:74,776,935...74,809,186 		JBrowse link
G Hmgb1 high mobility group box 1 involved_in ISO (PMID:9166431) RGD PMID:9166431 NCBI chr12:11,009,236...11,015,941
Ensembl chr12:5,901,586...5,978,565
Ensembl chr16:5,901,586...5,978,565 		JBrowse link
G Lig1 DNA ligase 1 NOT|involved_in ISO (PMID:9809069) RGD PMID:9809069 NCBI chr 1:74,165,688...74,204,400
Ensembl chr 1:74,165,842...74,204,413 		JBrowse link
G Lig3 DNA ligase 3 NOT|involved_in ISO (PMID:9809069) RGD PMID:9809069 NCBI chr10:67,717,808...67,741,141
Ensembl chr10:67,717,812...67,798,414 		JBrowse link
G Lig4 DNA ligase 4 involved_in
acts_upstream_of_or_within		 ISO (PMID:9809069)
MGI:1857732 (PMID:10716994), (PMID:15194694)		 RGD PMID:9809069 PMID:10716994 PMID:15194694 NCBI chr16:79,518,393...79,526,956
Ensembl chr16:79,518,312...79,527,040 		JBrowse link
G Prkdc protein kinase, DNA-activated, catalytic subunit acts_upstream_of_or_within ISO MGI:107202 (PMID:23836881) RGD PMID:23836881 NCBI chr11:98,544,952...98,762,499
Ensembl chr11:85,040,792...85,257,952 		JBrowse link
G Rag1 recombination activating 1 involved_in
acts_upstream_of_or_within		 ISO
IBA		 (PMID:14670978)
(PMID:10601033), (PMID:1547488), (PMID:20122409), (PMID:8284210)
MGI:97849 (PMID:2360047)
GO_REF:0000033		 RGD
GO_Central		 PMID:1547488 PMID:2360047 PMID:8284210 PMID:10601033 PMID:14670978 More... GO_REF:0000033 NCBI chr 3:108,372,087...108,383,184
Ensembl chr 3:87,917,004...87,928,291 		JBrowse link
G Rag2 recombination activating 2 involved_in
acts_upstream_of_or_within		 IBA
ISO		 GO_REF:0000033
(PMID:1547488), (PMID:18033247)
MGI:97848 (PMID:2360047)		 GO_Central
RGD		 PMID:1547488 PMID:2360047 PMID:18033247 GO_REF:0000033 NCBI chr 3:108,357,399...108,367,186
Ensembl chr 3:87,902,238...87,911,066 		JBrowse link
G Xrcc4 X-ray repair cross complementing 4 acts_upstream_of_or_within ISO MGI:1926771 (PMID:10716994) RGD PMID:10716994 NCBI chr 2:20,948,464...21,197,705
Ensembl chr 2:20,951,200...21,197,808 		JBrowse link
G Xrcc6 X-ray repair cross complementing 6 acts_upstream_of_or_within ISO MGI:2179954 (PMID:10716994) RGD PMID:10716994 NCBI chr 7:113,542,992...113,563,762
Ensembl chr 7:113,543,057...113,563,762 		JBrowse link
Term paths to the root
Path 1
Term Annotations click to browse term
  biological_process 20546
    cellular process 19536
      metabolic process 12171
        macromolecule metabolic process 9985
          nucleic acid metabolic process 5334
            DNA metabolic process 972
              DNA biosynthetic process + 180
              DNA catabolic process + 34
              DNA double-strand break processing + 23
              DNA integration 12
              DNA modification + 15
              DNA protection 5
              DNA recombination + 340
              DNA repair + 554
              DNA replication + 273
              DNA replication initiation + 34
              DNA replication termination + 1
              DNA replication, Okazaki fragment processing + 3
              DNA strand displacement + 1
              DNA strand elongation + 35
              DNA strand invasion + 6
              DNA strand resection involved in replication fork processing + 8
              DNA topological change 10
              DNA-templated DNA replication maintenance of fidelity + 59
              G-quadruplex DNA formation 1
              base-excision repair, AP site formation + 5
              base-excision repair, gap-filling 6
              chromosomal 5-methylcytosine DNA demethylation pathway + 3
              formation of extrachromosomal circular DNA + 8
              gap filling involved in double-strand break repair via nonhomologous end joining 0
              heteroduplex formation + 0
              lagging strand initiation 0
              maintenance of DNA repeat elements + 7
              meiotic DNA double-strand break formation + 8
              mitochondrial DNA metabolic process + 27
              negative regulation of DNA metabolic process + 141
              nucleotide-excision repair, DNA gap filling 6
              plastid DNA metabolic process + 0
              positive regulation of DNA metabolic process + 286
              regulation of DNA metabolic process + 469
              removal of nonhomologous ends + 0
              resolution of DNA recombination intermediates + 6
              telomere maintenance + 148
Path 2
Term Annotations click to browse term
  biological_process 20546
    cellular process 19536
      metabolic process 12171
        primary metabolic process 10746
          nucleobase-containing compound metabolic process 5951
            nucleic acid metabolic process 5334
              DNA metabolic process 972
                DNA biosynthetic process + 180
                DNA catabolic process + 34
                DNA double-strand break processing + 23
                DNA integration 12
                DNA modification + 15
                DNA protection 5
                DNA recombination + 340
                DNA repair + 554
                DNA replication + 273
                DNA replication initiation + 34
                DNA replication termination + 1
                DNA replication, Okazaki fragment processing + 3
                DNA strand displacement + 1
                DNA strand elongation + 35
                DNA strand invasion + 6
                DNA strand resection involved in replication fork processing + 8
                DNA topological change 10
                DNA-templated DNA replication maintenance of fidelity + 59
                G-quadruplex DNA formation 1
                base-excision repair, AP site formation + 5
                base-excision repair, gap-filling 6
                chromosomal 5-methylcytosine DNA demethylation pathway + 3
                formation of extrachromosomal circular DNA + 8
                gap filling involved in double-strand break repair via nonhomologous end joining 0
                heteroduplex formation + 0
                lagging strand initiation 0
                maintenance of DNA repeat elements + 7
                meiotic DNA double-strand break formation + 8
                mitochondrial DNA metabolic process + 27
                negative regulation of DNA metabolic process + 141
                nucleotide-excision repair, DNA gap filling 6
                plastid DNA metabolic process + 0
                positive regulation of DNA metabolic process + 286
                regulation of DNA metabolic process + 469
                removal of nonhomologous ends + 0
                resolution of DNA recombination intermediates + 6
                telomere maintenance + 148
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