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ONTOLOGY REPORT - ANNOTATIONS

Term:'de novo' IMP biosynthetic process
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Accession:GO:0006189 term browser browse the term
Definition:The chemical reactions and pathways resulting in the formation of IMP, inosine monophosphate, by the stepwise assembly of a purine ring on ribose 5-phosphate.
Synonyms:exact_synonym: 'de novo' IMP anabolism;   'de novo' IMP biosynthesis;   'de novo' IMP formation;   'de novo' IMP synthesis
 broad_synonym: 'de novo' purine biosynthesis;   'de novo' purine biosynthetic process


show annotations for term's descendants           Sort by:
'de novo' IMP biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Adsl adenylosuccinate lyase involved_in IEA
ISO 		GO_REF:0000041
(PMID:6480832)
GO_REF:0000107 		UniProt
RGD
Ensembl		 PMID:6480832 GO_REF:0000041 GO_REF:0000107 NCBI chr 7:112,479,256...112,503,439
Ensembl chr 7:112,479,271...112,503,760 		JBrowse link
G Atic 5-aminoimidazole-4-carboxamide ribonucleotide formyltransferase/IMP cyclohydrolase involved_in IDA
IEA
ISO
IBA 		GO_REF:0000041
(PMID:26588576)
GO_REF:0000033
(PMID:26144885)
GO_REF:0000107 		UniProt
RGD
GO_Central
Ensembl		 PMID:26144885 PMID:26588576 PMID:9332377 GO_REF:0000033 GO_REF:0000041 GO_REF:0000107, RGD:70804 NCBI chr 9:73,164,846...73,184,897
Ensembl chr 9:73,164,846...73,184,889 		JBrowse link
G ENSRNOG00000066810 involved_in IEA
IBA 		GO_REF:0000041
GO_REF:0000033 		UniProt
GO_Central		 GO_REF:0000033 GO_REF:0000041 Ensembl chr 1:52,389,359...52,390,972 JBrowse link
G Gart phosphoribosylglycinamide formyltransferase, phosphoribosylglycinamide synthetase, phosphoribosylaminoimidazole synthetase involved_in IEA
ISO 		GO_REF:0000041
(PMID:2183217)
(PMID:8299947)
GO_REF:0000107
GO_REF:0000104
GO_REF:0000002 		UniProt
RGD
Ensembl
InterPro		 PMID:2183217 PMID:8299947 GO_REF:0000002 GO_REF:0000041 GO_REF:0000104 GO_REF:0000107 NCBI chr11:30,864,896...30,891,125
Ensembl chr11:30,865,889...30,891,125 		JBrowse link
G LOC100359876 multifunctional protein ADE2-like involved_in IEA
IBA 		GO_REF:0000041
GO_REF:0000033
GO_REF:0000002 		UniProt
GO_Central
InterPro		 GO_REF:0000002 GO_REF:0000033 GO_REF:0000041 NCBI chr  X:4,032,827...4,034,310
Ensembl chr  X:4,032,895...4,033,896 		JBrowse link
G Paics phosphoribosylaminoimidazole carboxylase and phosphoribosylaminoimidazolesuccinocarboxamide synthase involved_in IEA
ISO
IBA 		GO_REF:0000041
(PMID:27590927)
GO_REF:0000033
GO_REF:0000002 		UniProt
RGD
GO_Central
InterPro		 PMID:27590927 GO_REF:0000002 GO_REF:0000033 GO_REF:0000041 NCBI chr14:31,199,086...31,232,731
Ensembl chr14:31,173,541...31,232,635 		JBrowse link
G Pfas phosphoribosylformylglycinamidine synthase involved_in IEA
ISO 		GO_REF:0000041
(PMID:27590927)
GO_REF:0000002
GO_REF:0000107 		UniProt
RGD
InterPro
Ensembl		 PMID:27590927 GO_REF:0000002 GO_REF:0000041 GO_REF:0000107 NCBI chr10:53,690,301...53,711,811
Ensembl chr10:53,691,626...53,708,420 		JBrowse link
G Ppat phosphoribosyl pyrophosphate amidotransferase involved_in IEA
ISO 		GO_REF:0000041
(PMID:6327016)
GO_REF:0000107 		UniProt
RGD
Ensembl		 PMID:6327016 GO_REF:0000041 GO_REF:0000107 NCBI chr14:31,215,741...31,250,144
Ensembl chr14:31,216,165...31,250,144 		JBrowse link
Term paths to the root
Path 1
Term Annotations click to browse term
  biological_process 20543
    cellular process 19534
      metabolic process 12158
        purine-containing compound metabolic process 617
          purine nucleotide metabolic process 480
            purine ribonucleotide metabolic process 385
              purine ribonucleotide biosynthetic process 144
                IMP biosynthetic process 14
                  'de novo' IMP biosynthetic process 8
Path 2
Term Annotations click to browse term
  biological_process 20543
    cellular process 19534
      metabolic process 12158
        primary metabolic process 10727
          nucleobase-containing compound metabolic process 5900
            nucleobase-containing small molecule metabolic process 730
              nucleoside phosphate metabolic process 699
                nucleotide metabolic process 540
                  purine nucleotide metabolic process 480
                    purine nucleotide biosynthetic process 181
                      purine ribonucleotide biosynthetic process 144
                        IMP biosynthetic process 14
                          'de novo' IMP biosynthetic process 8
paths to the root