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ONTOLOGY REPORT - ANNOTATIONS

Term:purine nucleobase catabolic process
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Accession:GO:0006145 term browser browse the term
Definition:The chemical reactions and pathways resulting in the breakdown of purine nucleobases, one of the two classes of nitrogen-containing ring compounds found in DNA and RNA, which include adenine and guanine.
Synonyms:exact_synonym: purine base breakdown;   purine base catabolic process;   purine base catabolism;   purine base degradation


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purine nucleobase catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Dpyd dihydropyrimidine dehydrogenase involved_in ISO
IEA		 (PMID:11988088)
GO_REF:0000107		 RGD
Ensembl		 PMID:11988088 GO_REF:0000107 NCBI chr 2:209,293,902...210,159,777
Ensembl chr 2:206,609,122...207,474,982 		JBrowse link
G Uox urate oxidase involved_in TAS
IBA		 GO_REF:0000033 GO_Central
RGD		 PMID:3182808 GO_REF:0000033, RGD:730101 NCBI chr 2:238,147,130...238,183,320
Ensembl chr 2:235,440,619...235,523,029 		JBrowse link
guanine catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Gda guanine deaminase involved_in IEA
ISO		 GO_REF:0000041
GO_REF:0000002
GO_REF:0000104
(PMID:8064675)		 UniProt
InterPro
RGD		 PMID:8064675 GO_REF:0000002 GO_REF:0000041 GO_REF:0000104 NCBI chr 1:228,333,401...228,408,901
Ensembl chr 1:218,906,815...218,982,416 		JBrowse link
G Uox urate oxidase involved_in IEA GO_REF:0000107 Ensembl GO_REF:0000107 NCBI chr 2:238,147,130...238,183,320
Ensembl chr 2:235,440,619...235,523,029 		JBrowse link
G Urad ureidoimidazoline (2-oxo-4-hydroxy-4-carboxy-5-) decarboxylase involved_in ISO (PMID:16462750) RGD PMID:16462750 NCBI chr12:12,745,388...12,755,034
Ensembl chr12:7,709,312...7,718,923 		JBrowse link
G Urah urate (5-hydroxyiso-) hydrolase involved_in IEA GO_REF:0000107 Ensembl GO_REF:0000107 NCBI chr 1:205,335,399...205,338,795
Ensembl chr 1:195,905,763...195,909,159 		JBrowse link
G Xdh xanthine dehydrogenase involved_in IEA
ISO
IDA		 GO_REF:0000107
(PMID:1590774)
PMID:3443108		 Ensembl
RGD		 PMID:1590774 PMID:3443108 GO_REF:0000107, RGD:42721989 NCBI chr 6:27,282,319...27,344,022
Ensembl chr 6:21,530,113...21,592,268 		JBrowse link
hypoxanthine catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Uox urate oxidase involved_in IEA GO_REF:0000107 Ensembl GO_REF:0000107 NCBI chr 2:238,147,130...238,183,320
Ensembl chr 2:235,440,619...235,523,029 		JBrowse link
G Urad ureidoimidazoline (2-oxo-4-hydroxy-4-carboxy-5-) decarboxylase involved_in ISO (PMID:16462750) RGD PMID:16462750 NCBI chr12:12,745,388...12,755,034
Ensembl chr12:7,709,312...7,718,923 		JBrowse link
G Urah urate (5-hydroxyiso-) hydrolase involved_in IEA GO_REF:0000107 Ensembl GO_REF:0000107 NCBI chr 1:205,335,399...205,338,795
Ensembl chr 1:195,905,763...195,909,159 		JBrowse link
G Xdh xanthine dehydrogenase involved_in IDA
ISO
IEA		 (PMID:1590774), (PMID:30936145)
PMID:3443108
GO_REF:0000107
(PMID:1619276)		 RGD
Ensembl		 PMID:1590774 PMID:1619276 PMID:30936145 PMID:232638 PMID:3443108 GO_REF:0000107, RGD:13210503, RGD:42721989 NCBI chr 6:27,282,319...27,344,022
Ensembl chr 6:21,530,113...21,592,268 		JBrowse link
xanthine catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Uox urate oxidase involved_in IEA GO_REF:0000107 Ensembl GO_REF:0000107 NCBI chr 2:238,147,130...238,183,320
Ensembl chr 2:235,440,619...235,523,029 		JBrowse link
G Urad ureidoimidazoline (2-oxo-4-hydroxy-4-carboxy-5-) decarboxylase involved_in ISO (PMID:16462750) RGD PMID:16462750 NCBI chr12:12,745,388...12,755,034
Ensembl chr12:7,709,312...7,718,923 		JBrowse link
G Urah urate (5-hydroxyiso-) hydrolase involved_in IEA GO_REF:0000107 Ensembl GO_REF:0000107 NCBI chr 1:205,335,399...205,338,795
Ensembl chr 1:195,905,763...195,909,159 		JBrowse link
G Xdh xanthine dehydrogenase involved_in ISO
IEA
ISS
IDA
IBA		 (PMID:17301077), (PMID:8670112)
GO_REF:0000107
GO_REF:0000024
PMID:15878860
PMID:3443108
GO_REF:0000033
(PMID:1590774)		 RGD
Ensembl
UniProt
GO_Central		 PMID:1590774 PMID:8670112 PMID:17301077 PMID:15878860 PMID:3443108 GO_REF:0000024 GO_REF:0000033 GO_REF:0000107, RGD:8553512, RGD:42721989 NCBI chr 6:27,282,319...27,344,022
Ensembl chr 6:21,530,113...21,592,268 		JBrowse link
Term paths to the root
Path 1
Term Annotations click to browse term
  biological_process 20567
    cellular process 19557
      metabolic process 12206
        catabolic process 2970
          nucleobase catabolic process 13
            purine nucleobase catabolic process 6
              adenine catabolic process 0
              anaerobic purine nucleobase catabolic process 0
              guanine catabolic process 5
              hypoxanthine catabolic process 4
              xanthine catabolic process 4
Path 2
Term Annotations click to browse term
  biological_process 20567
    cellular process 19557
      metabolic process 12206
        primary metabolic process 10763
          nucleobase-containing compound metabolic process 5900
            nucleobase-containing small molecule metabolic process 733
              nucleobase metabolic process 45
                purine nucleobase metabolic process 24
                  purine nucleobase catabolic process 6
                    adenine catabolic process 0
                    anaerobic purine nucleobase catabolic process 0
                    guanine catabolic process 5
                    hypoxanthine catabolic process 4
                    xanthine catabolic process 4
paths to the root