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ONTOLOGY REPORT - ANNOTATIONS

Term:oxaloacetate metabolic process
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Accession:GO:0006107 term browser browse the term
Definition:The chemical reactions and pathways involving oxaloacetate, the anion of oxobutanedioic acid, an important intermediate in metabolism, especially as a component of the TCA cycle.
Synonyms:exact_synonym: oxaloacetate metabolism


show annotations for term's descendants           Sort by:
oxaloacetate metabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Acly ATP citrate lyase involved_in ISO
IEA		 (PMID:1371749)
GO_REF:0000107		 RGD
Ensembl		 PMID:1371749 GO_REF:0000107 NCBI chr10:85,912,402...85,964,605
Ensembl chr10:85,412,049...85,463,320 		JBrowse link
G Cs citrate synthase IDA RGD PMID:5820645 PMID:818082 RGD:2306824, RGD:2306825 NCBI chr 7:1,348,389...1,374,624
Ensembl chr 7:758,345...791,421 		JBrowse link
G Fahd1 fumarylacetoacetate hydrolase domain containing 1 involved_in ISS
ISO
IEA		 GO_REF:0000024
(PMID:38287013)
GO_REF:0000107		 UniProt
RGD
Ensembl		 PMID:38287013 GO_REF:0000024 GO_REF:0000107 NCBI chr10:14,378,058...14,379,497
Ensembl chr10:13,873,527...13,875,012 		JBrowse link
G Fahd2a fumarylacetoacetate hydrolase domain containing 2A involved_in ISS
IEA
ISO		 GO_REF:0000024
GO_REF:0000107
(PMID:38287013)		 UniProt
Ensembl
RGD		 PMID:38287013 GO_REF:0000024 GO_REF:0000107 NCBI chr 3:114,657,176...114,665,349
Ensembl chr 3:114,655,865...114,665,356 		JBrowse link
G Got1 glutamic-oxaloacetic transaminase 1 acts_upstream_of_or_within IDA
ISO
IEA		 (PMID:4193185)
GO_REF:0000107		 RGD
Ensembl		 PMID:4193185 PMID:16489927 GO_REF:0000107, RGD:13504861 NCBI chr 1:252,306,541...252,337,622
Ensembl chr 1:242,357,306...242,380,633 		JBrowse link
G Got2 glutamic-oxaloacetic transaminase 2 acts_upstream_of_or_within IDA
ISO		 (PMID:4193185) RGD PMID:4193185 PMID:16489927 RGD:13504861 NCBI chr19:9,180,428...9,206,113
Ensembl chr19:9,174,311...9,199,994 		JBrowse link
G Mdh1 malate dehydrogenase 1 involved_in IDA
IBA		 GO_REF:0000033 GO_Central
RGD		 PMID:17447164 GO_REF:0000033, RGD:1624966 NCBI chr14:99,831,934...99,847,227
Ensembl chr14:95,630,306...95,645,925 		JBrowse link
G Mdh1b malate dehydrogenase 1B involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr 9:72,614,185...72,661,820
Ensembl chr 9:65,119,029...65,167,933 		JBrowse link
G Nit2 nitrilase family, member 2 involved_in ISO
IEA
IBA		 (PMID:22674578)
GO_REF:0000107
GO_REF:0000033		 RGD
Ensembl
GO_Central		 PMID:22674578 GO_REF:0000033 GO_REF:0000107 NCBI chr11:56,832,957...56,844,142
Ensembl chr11:43,363,985...43,375,024 		JBrowse link
G Pck1 phosphoenolpyruvate carboxykinase 1 involved_in IDA
ISO
IBA
IEA		 PMID:31461616
(PMID:30193097)
(PMID:26792594)
PMID:26322521
PMID:26709450
(PMID:29230018)
GO_REF:0000033
GO_REF:0000107		 RGD
GO_Central
Ensembl		 PMID:26792594 PMID:29230018 PMID:30193097 PMID:16125296 PMID:4303362 More... GO_REF:0000033 GO_REF:0000107, RGD:1601233, RGD:2302850, RGD:2302971, RGD:30309906, RGD:30309937, RGD:13825433, RGD:30309918 NCBI chr 3:182,348,572...182,354,521
Ensembl chr 3:161,930,256...161,936,191 		JBrowse link
G Pck2 phosphoenolpyruvate carboxykinase 2 (mitochondrial) involved_in IDA
IBA		 GO_REF:0000033 GO_Central
RGD		 PMID:6049928 GO_REF:0000033, RGD:2302971 NCBI chr15:32,997,853...33,006,691
Ensembl chr15:29,027,894...29,037,283 		JBrowse link
Term paths to the root
Path 1
Term Annotations click to browse term
  biological_process 20567
    cellular process 19557
      metabolic process 12206
        small molecule metabolic process 1947
          organic acid metabolic process 1062
            oxoacid metabolic process 1040
              carboxylic acid metabolic process 1025
                dicarboxylic acid metabolic process 113
                  oxaloacetate metabolic process 11
                    asparagine biosynthetic process from oxaloacetate 0
                    glutamate catabolic process to oxaloacetate 0
                    protocatechuate catabolic process, meta-cleavage 0
paths to the root