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ONTOLOGY REPORT - ANNOTATIONS

Term:succinyl-CoA metabolic process
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Accession:GO:0006104 term browser browse the term
Definition:The chemical reactions and pathways involving succinyl-CoA, a compound composed of the monovalent acyl group 3-carboxypropanoyl, derived from succinic acid by loss of one OH group, linked to coenzyme A.
Synonyms:exact_synonym: succinyl-CoA metabolism


show annotations for term's descendants           Sort by:
succinyl-CoA metabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Acot4 acyl-CoA thioesterase 4 involved_in ISO
IEA 		(PMID:16940157)
GO_REF:0000107 		RGD
Ensembl		 PMID:16940157 GO_REF:0000107 NCBI chr 6:109,399,032...109,405,138
Ensembl chr 6:109,399,578...109,405,138 		JBrowse link
G Dlst dihydrolipoamide S-succinyltransferase involved_in ISO
ISS 		(PMID:10806400)
GO_REF:0000024 		RGD
UniProt		 PMID:10806400 GO_REF:0000024 NCBI chr 6:110,489,576...110,512,841
Ensembl chr 6:110,489,392...110,514,357 		JBrowse link
G Ogdh oxoglutarate dehydrogenase involved_in ISO
IEA 		(PMID:24495017), (PMID:29211711)
GO_REF:0000107 		RGD
Ensembl		 PMID:24495017 PMID:29211711 GO_REF:0000107 NCBI chr14:85,363,949...85,431,405
Ensembl chr14:85,364,014...85,432,271 		JBrowse link
G Sucla2 succinate-CoA ligase ADP-forming subunit beta involved_in IDA
IBA 		GO_REF:0000033 GO_Central
RGD		 PMID:17403370 GO_REF:0000033, RGD:2306915 NCBI chr15:55,161,894...55,215,031
Ensembl chr15:55,161,868...55,215,029 		JBrowse link
G Suclg1 succinate-CoA ligase GDP/ADP-forming subunit alpha IDA RGD PMID:7430155 PMID:17403370 RGD:2306879, RGD:2306915 NCBI chr 4:106,866,329...106,895,686
Ensembl chr 4:106,866,114...106,895,689 		JBrowse link
G Suclg2 succinate-CoA ligase GDP-forming subunit beta involved_in IDA
IEA
IBA 		GO_REF:0000002
GO_REF:0000033 		InterPro
GO_Central
RGD		 PMID:7430155 PMID:17403370 GO_REF:0000002 GO_REF:0000033, RGD:2306879, RGD:2306915 NCBI chr 4:129,623,833...129,893,937
Ensembl chr 4:129,623,834...129,937,296 		JBrowse link
2-oxoglutarate decarboxylation to succinyl-CoA term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Dld dihydrolipoamide dehydrogenase involved_in ISO
IEA 		(PMID:15712224)
GO_REF:0000107 		RGD
Ensembl		 PMID:15712224 GO_REF:0000107 NCBI chr 6:53,631,686...53,655,059
Ensembl chr 6:53,619,631...53,652,354 		JBrowse link
G Dlst dihydrolipoamide S-succinyltransferase involved_in ISO MGI:4367457 (PMID:19660549) RGD PMID:19660549 NCBI chr 6:110,489,576...110,512,841
Ensembl chr 6:110,489,392...110,514,357 		JBrowse link
G Ogdh oxoglutarate dehydrogenase involved_in IEA
ISO 		GO_REF:0000107
(PMID:22169199) 		Ensembl
RGD		 PMID:22169199 GO_REF:0000107 NCBI chr14:85,363,949...85,431,405
Ensembl chr14:85,364,014...85,432,271 		JBrowse link
succinyl-CoA biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Mmut methylmalonyl-CoA mutase involved_in IEA
ISO 		GO_REF:0000107
(PMID:7904153) 		Ensembl
RGD		 PMID:7904153 GO_REF:0000107 NCBI chr 9:27,425,935...27,454,202
Ensembl chr 9:27,425,935...27,454,342 		JBrowse link
succinyl-CoA catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Nudt19 nudix hydrolase 19 involved_in ISS
IEA
ISO 		GO_REF:0000024
GO_REF:0000107
(PMID:29378847) 		UniProt
Ensembl
RGD		 PMID:29378847 GO_REF:0000024 GO_REF:0000107 NCBI chr 1:97,351,373...97,362,969
Ensembl chr 1:97,351,378...97,362,969 		JBrowse link
G Nudt7 nudix hydrolase 7 involved_in ISO (PMID:29378847) RGD PMID:29378847 NCBI chr19:59,034,808...59,049,148
Ensembl chr19:59,034,839...59,063,994 		JBrowse link
G Nudt8 nudix hydrolase 8 involved_in ISO (PMID:31004344) RGD PMID:31004344 NCBI chr 1:210,723,209...210,724,717
Ensembl chr 1:210,723,209...210,725,638 		JBrowse link
Term paths to the root
Path 1
Term Annotations click to browse term
  biological_process 19315
    cellular process 18484
      metabolic process 11533
        sulfur compound metabolic process 296
          acyl-CoA metabolic process 104
            succinyl-CoA metabolic process 11
              L-methionine catabolic process to succinyl-CoA 0
              succinyl-CoA biosynthetic process + 4
              succinyl-CoA catabolic process 3
              succinyl-CoA pathway 0
              tetrapyrrole biosynthetic process from glycine and succinyl-CoA + 0
Path 2
Term Annotations click to browse term
  biological_process 19315
    cellular process 18484
      metabolic process 11533
        primary metabolic process 10162
          nucleobase-containing compound metabolic process 5642
            nucleobase-containing small molecule metabolic process 693
              nucleoside phosphate metabolic process 660
                acyl-CoA metabolic process 104
                  succinyl-CoA metabolic process 11
                    L-methionine catabolic process to succinyl-CoA 0
                    succinyl-CoA biosynthetic process + 4
                    succinyl-CoA catabolic process 3
                    succinyl-CoA pathway 0
                    tetrapyrrole biosynthetic process from glycine and succinyl-CoA + 0
paths to the root