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ONTOLOGY REPORT - ANNOTATIONS

Term:isocitrate metabolic process
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Accession:GO:0006102 term browser browse the term
Definition:The chemical reactions and pathways involving isocitrate, the anion of isocitric acid, 1-hydroxy-1,2,3-propanetricarboxylic acid. Isocitrate is an important intermediate in the TCA cycle and the glycoxylate cycle.
Synonyms:exact_synonym: isocitrate metabolism

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isocitrate metabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Aco2 aconitase 2 ISO RGD PMID:9712727 PMID:14674759 RGD:2306852 RGD:2306877 NCBI chrNW_004936492:407,482...452,538
Ensembl chrNW_004936492:407,482...452,537 		JBrowse link
G Idh1 isocitrate dehydrogenase (NADP(+)) 1 involved_in ISO
IEA 		RGD
TreeGrafter
InterPro
Ensembl		 PMID:17447164 GO_REF:0000002 GO_REF:0000107 GO_REF:0000118 RGD:1624966 NCBI chrNW_004936950:334,894...349,221
Ensembl chrNW_004936950:334,934...348,363 		JBrowse link
G Idh2 isocitrate dehydrogenase (NADP(+)) 2 involved_in IEA InterPro GO_REF:0000002 NCBI chrNW_004936483:15,845,777...15,864,341
Ensembl chrNW_004936483:15,845,792...15,864,341 		JBrowse link
G Idh3a isocitrate dehydrogenase (NAD(+)) 3 catalytic subunit alpha involved_in IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004936471:36,823,003...36,842,576
Ensembl chrNW_004936471:36,822,971...36,842,610 		JBrowse link
G Idh3b isocitrate dehydrogenase (NAD(+)) 3 non-catalytic subunit beta involved_in IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004936485:16,033,287...16,038,097
Ensembl chrNW_004936485:16,033,128...16,042,821 		JBrowse link
G Idh3g isocitrate dehydrogenase (NAD(+)) 3 non-catalytic subunit gamma involved_in IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004936809:666,231...675,279
Ensembl chrNW_004936809:666,337...675,214 		JBrowse link
G LOC101964695 isocitrate dehydrogenase [NAD] subunit gamma, mitochondrial-like involved_in IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004936654:2,129,260...2,131,869 JBrowse link
Term paths to the root
Path 1
Term Annotations click to browse term
  biological_process 17413
    cellular process 17013
      metabolic process 11289
        small molecule metabolic process 1646
          alcohol metabolic process 320
            secondary alcohol metabolic process 145
              isocitrate metabolic process 7
Path 2
Term Annotations click to browse term
  biological_process 17413
    cellular process 17013
      metabolic process 11289
        small molecule metabolic process 1646
          organic acid metabolic process 888
            oxoacid metabolic process 868
              carboxylic acid metabolic process 857
                tricarboxylic acid metabolic process 17
                  isocitrate metabolic process 7
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