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ONTOLOGY REPORT - ANNOTATIONS

Term:aminoglycan catabolic process
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Accession:GO:0006026 term browser browse the term
Definition:The chemical reactions and pathways resulting in the breakdown of aminoglycans, any polymer containing amino groups that consists of more than about 10 monosaccharide residues joined to each other by glycosidic linkages.
Synonyms:exact_synonym: aminoglycan breakdown;   aminoglycan catabolism;   aminoglycan degradation


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chitin catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Chi3l1 chitinase 3 like 1 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr13:48,193,839...48,201,822
Ensembl chr13:45,641,802...45,649,787 		JBrowse link
G Chi3l3 chitinase 3-like 3 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr 2:193,808,135...193,825,511
Ensembl chr 2:193,812,431...193,825,513 		JBrowse link
G Chia chitinase, acidic involved_in IDA
IBA
ISO
IEA
ISS		 GO_REF:0000033
(PMID:11085997)
GO_REF:0000117
(PMID:19435888)
GO_REF:0000024		 GO_Central
RGD
UniProt		 PMID:11085997 PMID:19435888 PMID:11085997 GO_REF:0000024 GO_REF:0000033 GO_REF:0000117, RGD:5000759 NCBI chr 2:193,614,374...193,656,532
Ensembl chr 2:193,614,114...193,656,533 		JBrowse link
G Chial1 chitinase acidic-like 1 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr 2:193,858,038...193,879,133
Ensembl chr 2:193,857,344...193,879,309 		JBrowse link
G Chit1 chitinase 1 involved_in ISO
IBA		 (PMID:19725875)
GO_REF:0000033		 RGD
GO_Central		 PMID:19725875 GO_REF:0000033 NCBI chr13:45,565,841...45,613,593
Ensembl chr13:45,593,845...45,613,592 		JBrowse link
G Ctbs chitobiase involved_in IDA
IBA		 GO_REF:0000033 GO_Central
RGD		 PMID:2751306 GO_REF:0000033, RGD:2301430 NCBI chr 2:238,000,800...238,015,368
Ensembl chr 2:235,340,547...235,355,091 		JBrowse link
G ENSRNOG00000067768 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 Ensembl chr 2:193,698,635...193,711,509 JBrowse link
chondroitin sulfate proteoglycan catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Gusb glucuronidase, beta involved_in ISO MGI:1856041 (PMID:23897660) RGD PMID:23897660 NCBI chr12:32,337,281...32,350,838
Ensembl chr12:26,697,951...26,726,905 		JBrowse link
G Hexb hexosaminidase subunit beta involved_in IEA
ISO		 GO_REF:0000107
MGI:2429701 (PMID:22451654)		 Ensembl
RGD		 PMID:22451654 GO_REF:0000107 NCBI chr 2:30,218,608...30,238,771
Ensembl chr 2:28,484,012...28,504,223 		JBrowse link
G Hyal1 hyaluronidase 1 involved_in IEA
ISO		 GO_REF:0000107
MGI:2658730 (PMID:22451654)		 Ensembl
RGD		 PMID:22451654 GO_REF:0000107 NCBI chr 8:117,129,311...117,133,162
Ensembl chr 8:108,250,667...108,260,210 		JBrowse link
G Hyal4 hyaluronidase 4 acts_upstream_of_or_within ISO (PMID:23086929) RGD PMID:23086929 NCBI chr 4:53,256,179...53,274,819
Ensembl chr 4:53,256,179...53,274,819 		JBrowse link
glycosaminoglycan catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Hyal2 hyaluronidase 2 involved_in ISO
ISS		 (PMID:9712871)
GO_REF:0000024		 RGD
UniProt		 PMID:9712871 GO_REF:0000024 NCBI chr 8:117,121,802...117,125,494
Ensembl chr 8:108,243,133...108,246,850 		JBrowse link
G Hyal4 hyaluronidase 4 TAS RGD PMID:10989127 RGD:1331360 NCBI chr 4:53,256,179...53,274,819
Ensembl chr 4:53,256,179...53,274,819 		JBrowse link
G Ids iduronate 2-sulfatase involved_in ISO (PMID:28593992) RGD PMID:28593992 NCBI chr  X:154,070,781...154,093,681
Ensembl chr  X:149,025,976...149,046,663 		JBrowse link
G Idua alpha-L-iduronidase acts_upstream_of_or_within IDA
ISO		 MGI:2176236|MGI:2651471|MGI:4415188 (PMID:16979922), (PMID:19751987), (PMID:19834056), (PMID:21873421), (PMID:22580166) RGD PMID:16979922 PMID:19751987 PMID:19834056 PMID:21873421 PMID:22580166 More... RGD:1599427 NCBI chr14:1,175,994...1,203,913
Ensembl chr14:1,032,171...1,046,522 		JBrowse link
G Lyve1 lymphatic vessel endothelial hyaluronan receptor 1 acts_upstream_of_or_within ISO (PMID:11278811) RGD PMID:11278811 NCBI chr 1:174,393,387...174,410,977
Ensembl chr 1:164,962,872...164,976,309 		JBrowse link
G Sgsh N-sulfoglucosamine sulfohydrolase involved_in ISO
IBA		 (PMID:15146460), (PMID:7493035)
GO_REF:0000033		 RGD
GO_Central		 PMID:7493035 PMID:15146460 GO_REF:0000033 NCBI chr10:105,095,336...105,112,037
Ensembl chr10:104,598,112...104,613,486 		JBrowse link
hyaluronan catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Cd44 CD44 molecule involved_in ISO
IEA		 (PMID:17170110)
GO_REF:0000107
(PMID:26528478)		 RGD
Ensembl		 PMID:17170110 PMID:26528478 GO_REF:0000107 NCBI chr 3:109,610,824...109,699,776
Ensembl chr 3:89,157,058...89,244,620 		JBrowse link
G Cemip cell migration inducing hyaluronidase 1 involved_in ISS
ISO		 GO_REF:0000024
(PMID:23509262)
(PMID:24251095)		 UniProt
RGD		 PMID:23509262 PMID:24251095 GO_REF:0000024 NCBI chr 1:137,906,921...138,062,430
Ensembl chr 1:137,908,920...138,062,415 		JBrowse link
G Cemip2 cell migration inducing hyaluronidase 2 involved_in ISO (PMID:34624311) RGD PMID:34624311 NCBI chr 1:228,756,826...228,834,313
Ensembl chr 1:219,337,985...219,407,760 		JBrowse link
G Fgf2 fibroblast growth factor 2 involved_in ISO (PMID:19577615) RGD PMID:19577615 NCBI chr 2:122,164,454...122,218,796
Ensembl chr 2:120,236,328...120,291,221 		JBrowse link
G Gusb glucuronidase, beta involved_in ISO (PMID:20385825) RGD PMID:20385825 NCBI chr12:32,337,281...32,350,838
Ensembl chr12:26,697,951...26,726,905 		JBrowse link
G Hexa hexosaminidase subunit alpha involved_in ISO MGI:2429698 (PMID:22451654) RGD PMID:22451654 NCBI chr 8:68,832,524...68,857,462
Ensembl chr 8:59,936,660...59,962,013 		JBrowse link
G Hexb hexosaminidase subunit beta involved_in IEA
ISO		 GO_REF:0000107
MGI:2429701 (PMID:22451654)		 Ensembl
RGD		 PMID:22451654 GO_REF:0000107 NCBI chr 2:30,218,608...30,238,771
Ensembl chr 2:28,484,012...28,504,223 		JBrowse link
G Hmmr hyaluronan-mediated motility receptor involved_in ISO (PMID:26528478) RGD PMID:26528478 NCBI chr10:25,132,933...25,163,029
Ensembl chr10:25,132,977...25,163,060 		JBrowse link
G Hyal1 hyaluronidase 1 involved_in ISO
IEA
IBA		 (PMID:12084718)
GO_REF:0000107
GO_REF:0000033
MGI:2658730 (PMID:22451654), (PMID:26887442)
(PMID:11296287), (PMID:17170110), (PMID:20473947), (PMID:21695196), (PMID:21699545)		 RGD
Ensembl
GO_Central		 PMID:11296287 PMID:12084718 PMID:17170110 PMID:20473947 PMID:21695196 More... GO_REF:0000033 GO_REF:0000107 NCBI chr 8:117,129,311...117,133,162
Ensembl chr 8:108,250,667...108,260,210 		JBrowse link
G Hyal2 hyaluronidase 2 involved_in IDA
ISO
IEA
IBA		 PMID:19635555
(PMID:17170110), (PMID:19443707), (PMID:20554532), (PMID:21699545)
GO_REF:0000107
GO_REF:0000033
MGI:3836764 (PMID:23172227), (PMID:26887442)		 RGD
Ensembl
GO_Central		 PMID:17170110 PMID:19443707 PMID:20554532 PMID:21699545 PMID:23172227 More... GO_REF:0000033 GO_REF:0000107, RGD:8553259 NCBI chr 8:117,121,802...117,125,494
Ensembl chr 8:108,243,133...108,246,850 		JBrowse link
G Hyal3 hyaluronidase 3 involved_in ISS
ISO
IBA
IEA		 GO_REF:0000024
(PMID:12084718)
(PMID:21699545)
GO_REF:0000033
(PMID:20586096)
GO_REF:0000107		 UniProt
RGD
GO_Central
Ensembl		 PMID:12084718 PMID:20586096 PMID:21699545 GO_REF:0000024 GO_REF:0000033 GO_REF:0000107 NCBI chr 8:117,133,028...117,138,663
Ensembl chr 8:108,250,667...108,260,647 		JBrowse link
G Hyal4 hyaluronidase 4 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr 4:53,256,179...53,274,819
Ensembl chr 4:53,256,179...53,274,819 		JBrowse link
G Hyal5 hyaluronoglucosaminidase 5 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr 4:53,341,105...53,412,280
Ensembl chr 4:53,343,475...53,370,785 		JBrowse link
G Lyve1 lymphatic vessel endothelial hyaluronan receptor 1 involved_in ISO (PMID:11278811) RGD PMID:11278811 NCBI chr 1:174,393,387...174,410,977
Ensembl chr 1:164,962,872...164,976,309 		JBrowse link
G Spam1 sperm adhesion molecule 1 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr 4:53,302,745...53,312,913
Ensembl chr 4:53,302,745...53,312,908 		JBrowse link
G Stab2 stabilin 2 involved_in IEA
ISO		 GO_REF:0000107
MGI:5318244 (PMID:22371575)		 Ensembl
RGD		 PMID:22371575 GO_REF:0000107 NCBI chr 7:23,136,938...23,342,633
Ensembl chr 7:21,249,391...21,434,042 		JBrowse link
G Tgfb1 transforming growth factor, beta 1 involved_in ISO
ISS		 (PMID:17324121)
GO_REF:0000024		 RGD
UniProt		 PMID:17324121 GO_REF:0000024 NCBI chr 1:90,324,312...90,340,627
Ensembl chr 1:81,196,532...81,212,847 		JBrowse link
peptidoglycan catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G LOC134485743 peptidoglycan recognition protein 3-like involved_in IEA GO_REF:0000002 InterPro GO_REF:0000002 NCBI chr 2:179,882,812...179,898,376 JBrowse link
G Lyg1 lysozyme G1 involved_in IEA GO_REF:0000002 InterPro GO_REF:0000002 NCBI chr 9:47,666,938...47,678,687
Ensembl chr 9:40,171,123...40,182,869 		JBrowse link
G Lyg2 lysozyme G2 involved_in IEA GO_REF:0000002 InterPro GO_REF:0000002 NCBI chr 9:47,635,914...47,646,618
Ensembl chr 9:40,141,381...40,150,821 		JBrowse link
G Pglyrp1 peptidoglycan recognition protein 1 involved_in IEA GO_REF:0000002 InterPro GO_REF:0000002 NCBI chr 1:87,659,863...87,665,048
Ensembl chr 1:78,531,815...78,537,001 		JBrowse link
G Pglyrp2 peptidoglycan recognition protein 2 involved_in IEA GO_REF:0000002 InterPro GO_REF:0000002 NCBI chr 7:12,069,414...12,082,437
Ensembl chr 7:11,418,880...11,427,773 		JBrowse link
G Pglyrp3 peptidoglycan recognition protein 3 involved_in IEA GO_REF:0000002 InterPro GO_REF:0000002 NCBI chr 2:180,174,931...180,186,007
Ensembl chr 2:177,477,407...177,490,736
Ensembl chr 2:177,477,407...177,490,736 		JBrowse link
G Pglyrp4 peptidoglycan recognition protein 4 involved_in IEA GO_REF:0000002 InterPro GO_REF:0000002 NCBI chr 2:178,500,238...178,669,328
Ensembl chr 2:176,218,519...176,242,251 		JBrowse link
Term paths to the root
Path 1
Term Annotations click to browse term
  biological_process 20536
    cellular process 19525
      metabolic process 12160
        macromolecule metabolic process 9981
          aminoglycan metabolic process 107
            aminoglycan catabolic process 34
              chitin catabolic process + 7
              glycosaminoglycan catabolic process + 27
              poly-N-acetyllactosamine catabolic process 0
paths to the root