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ONTOLOGY REPORT - ANNOTATIONS

Term:gap junction
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Accession:GO:0005921 term browser browse the term
Definition:A cell-cell junction composed of pannexins or innexins and connexins, two different families of channel-forming proteins.
Synonyms:exact_synonym: communicating junction;   gap junction macula;   gap junction plaque;   macula communicans;   zonula communicans
 related_synonym: electrical synapse;   electrotonic synapse;   intercellular gap junction channel
 xref: NIF_Subcellular:sao118541872;   Wikipedia:Gap_junction
 only_in_taxon: NCBITaxon:6072 ! Eumetazoa


show annotations for term's descendants           Sort by:
gap junction term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Calb2 calbindin 2 located_in IEA
ISO		 GO_REF:0000107
(PMID:12868005)		 Ensembl
RGD		 PMID:12868005 GO_REF:0000107 NCBI chr19:38,114,435...38,141,438
Ensembl chr19:38,114,424...38,141,438 		JBrowse link
G Ccn3 cellular communication network factor 3 located_in ISO
IDA		 (PMID:15181016)
PMID:15213231		 RGD PMID:15181016 PMID:15213231 RGD:10400864 NCBI chr 7:86,094,000...86,101,022
Ensembl chr 7:86,094,000...86,101,019 		JBrowse link
G Dbn1 drebrin 1 located_in IEA
ISO		 GO_REF:0000107
(PMID:15084279)		 Ensembl
RGD		 PMID:15084279 GO_REF:0000107 NCBI chr17:9,150,608...9,164,982
Ensembl chr17:9,150,659...9,164,984 		JBrowse link
G Des desmin located_in IDA PMID:17673670 BHF-UCL PMID:17673670 RGD:6784510 NCBI chr 9:76,850,979...76,858,695
Ensembl chr 9:76,850,982...76,858,699 		JBrowse link
G Gja1 gap junction protein, alpha 1 located_in IDA
ISO		 (PMID:11922902), (PMID:12738802), (PMID:14595769), (PMID:15084279), (PMID:20086016), (PMID:20089884), (PMID:7892609)
PMID:15709751
(PMID:22470101), (PMID:30054380)
(PMID:1696265), (PMID:23348765), (PMID:30599359)		 RGD PMID:1696265 PMID:7892609 PMID:11922902 PMID:12738802 PMID:14595769 More... RGD:1580399, RGD:8554661, RGD:4892648, RGD:1601342, RGD:1582674 NCBI chr20:35,756,007...35,768,481
Ensembl chr20:35,755,991...35,768,582 		JBrowse link
G Gja10 gap junction protein, alpha 10 located_in ISO (PMID:10329667) RGD PMID:10329667 NCBI chr 5:46,991,051...47,002,902
Ensembl chr 5:46,992,946...46,996,570 		JBrowse link
G Gja3 gap junction protein, alpha 3 located_in IDA
ISO		 (PMID:11786642) RGD PMID:11786642 PMID:1659572 RGD:728416 NCBI chr15:31,181,360...31,206,820
Ensembl chr15:31,181,369...31,206,810 		JBrowse link
G Gja4 gap junction protein, alpha 4 TAS
IDA		 RGD PMID:11978404 PMID:10894813 RGD:728686, RGD:1598434 NCBI chr 5:139,633,324...139,635,857
Ensembl chr 5:139,633,287...139,635,925 		JBrowse link
G Gja5 gap junction protein, alpha 5 located_in ISO (PMID:23348765)
(PMID:9501070)		 RGD PMID:9501070 PMID:23348765 NCBI chr 2:184,602,407...184,621,952
Ensembl chr 2:184,564,475...184,621,952 		JBrowse link
G Gjb1 gap junction protein, beta 1 located_in IDA
ISO		 (PMID:20089884) RGD PMID:20089884 PMID:12119284 RGD:728476 NCBI chr  X:66,501,848...66,509,783
Ensembl chr  X:66,501,820...66,509,925 		JBrowse link
G Gjb2 gap junction protein, beta 2 located_in IDA
ISO		 (PMID:14595769), (PMID:20089884), (PMID:24590285)
(PMID:12767933)		 RGD PMID:12767933 PMID:14595769 PMID:20089884 PMID:24590285 PMID:12064610 More... RGD:632752, RGD:12738139 NCBI chr15:31,260,390...31,278,222
Ensembl chr15:31,260,357...31,278,177 		JBrowse link
G Gjb3 gap junction protein, beta 3 located_in IDA
ISO		 (PMID:14595769) RGD PMID:14595769 PMID:12123633 RGD:12738139 NCBI chr 5:139,649,227...139,654,970
Ensembl chr 5:139,649,195...139,654,980 		JBrowse link
G Gjb6 gap junction protein, beta 6 located_in IDA
ISO		 (PMID:14595769), (PMID:20089884), (PMID:24590285)
(PMID:19285977)		 RGD PMID:14595769 PMID:19285977 PMID:20089884 PMID:24590285 PMID:10197766 More... RGD:1599836, RGD:632752 NCBI chr15:31,284,561...31,294,552
Ensembl chr15:31,284,419...31,294,582 		JBrowse link
G Gjc1 gap junction protein, gamma 1 located_in IDA
ISO		 (PMID:11922902) RGD PMID:11922902 PMID:11668048 RGD:628534 NCBI chr10:87,758,192...87,785,443
Ensembl chr10:87,760,528...87,785,867 		JBrowse link
G Gjc2 gap junction protein, gamma 2 located_in IDA
ISO		 (PMID:11160382)
(PMID:17344063)		 RGD PMID:11160382 PMID:17344063 PMID:16203097 RGD:13208516 NCBI chr10:43,962,642...43,971,358
Ensembl chr10:43,962,642...43,970,467 		JBrowse link
G Gjd2 gap junction protein, delta 2 located_in TAS
IDA		 PMID:16650609 RGD
MGI		 PMID:12064624 PMID:16650609 RGD:728473, RGD:8553398 NCBI chr 3:100,771,450...100,776,134
Ensembl chr 3:100,772,062...100,775,061 		JBrowse link
G Gjd3 gap junction protein, delta 3 located_in ISO (PMID:12681499) RGD PMID:12681499 NCBI chr10:83,933,694...83,935,759
Ensembl chr10:83,934,135...83,934,971 		JBrowse link
G Panx1 Pannexin 1 located_in ISS
ISO		 GO_REF:0000024
(PMID:16908669), (PMID:17715132)		 UniProt
RGD		 PMID:16908669 PMID:17715132 GO_REF:0000024 NCBI chr 8:11,851,176...11,889,774
Ensembl chr 8:11,850,730...11,889,774 		JBrowse link
G Panx2 pannexin 2 located_in IEA GO_REF:0000104 UniProt GO_REF:0000104 NCBI chr 7:120,139,259...120,153,056
Ensembl chr 7:120,139,294...120,152,361 		JBrowse link
G Panx3 pannexin 3 located_in ISS
ISO		 GO_REF:0000024
(PMID:21690309)		 UniProt
RGD		 PMID:21690309 GO_REF:0000024 NCBI chr 8:37,366,758...37,377,640
Ensembl chr 8:37,366,862...37,377,640 		JBrowse link
G Sgsm3 small G protein signaling modulator 3 located_in IEA
ISO		 GO_REF:0000107
(PMID:15709751)		 Ensembl
RGD		 PMID:15709751 GO_REF:0000107 NCBI chr 7:112,514,453...112,544,109
Ensembl chr 7:112,514,630...112,544,108 		JBrowse link
G Skp1 S-phase kinase-associated protein 1 IDA MMO:0000538 RGD PMID:12117534 RGD:152177518 NCBI chr10:36,401,987...36,417,066
Ensembl chr10:36,402,153...36,417,388 		JBrowse link
G Specc1l sperm antigen with calponin homology and coiled-coil domains 1-like located_in IEA GO_REF:0000044 UniProt GO_REF:0000044 NCBI chr20:13,337,983...13,443,665
Ensembl chr20:13,339,692...13,443,665 		JBrowse link
G Tjp1 tight junction protein 1 located_in IDA PMID:29021339 UniProt PMID:29021339 RGD:13825187 NCBI chr 1:118,849,838...119,094,492
Ensembl chr 1:118,849,838...119,094,432 		JBrowse link
G Ybx3 Y box binding protein 3 located_in IDA PMID:16650609 MGI PMID:16650609 RGD:8553398 NCBI chr 4:165,129,747...165,153,101
Ensembl chr 4:165,129,758...165,153,161 		JBrowse link
connexin complex term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Gja1 gap junction protein, alpha 1 part_of IDA
ISO
IMP
IEA
IBA		 PMID:1371548
(PMID:7930207)
PMID:15284189
PMID:19808665
GO_REF:0000002
GO_REF:0000033		 RGD
InterPro
GO_Central		 PMID:7930207 PMID:15048573 PMID:16731531 PMID:9851942 PMID:1371548 More... GO_REF:0000002 GO_REF:0000033, RGD:1580399, RGD:1582674, RGD:1598435, RGD:14397551, RGD:12793029, RGD:12793009 NCBI chr20:35,756,007...35,768,481
Ensembl chr20:35,755,991...35,768,582 		JBrowse link
G Gja10 gap junction protein, alpha 10 part_of IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr 5:46,991,051...47,002,902
Ensembl chr 5:46,992,946...46,996,570 		JBrowse link
G Gja3 gap junction protein, alpha 3 part_of ISO
IEA
ISS
IBA		 (PMID:30044662)
GO_REF:0000107
GO_REF:0000024
GO_REF:0000033		 RGD
Ensembl
UniProt
GO_Central		 PMID:30044662 GO_REF:0000024 GO_REF:0000033 GO_REF:0000107 NCBI chr15:31,181,360...31,206,820
Ensembl chr15:31,181,369...31,206,810 		JBrowse link
G Gja4 gap junction protein, alpha 4 part_of IDA
IBA		 GO_REF:0000033 GO_Central
RGD		 PMID:9851942 GO_REF:0000033, RGD:1598435 NCBI chr 5:139,633,324...139,635,857
Ensembl chr 5:139,633,287...139,635,925 		JBrowse link
G Gja5 gap junction protein, alpha 5 part_of IDA
ISO
IMP
IBA		 (PMID:22247482)
(PMID:7930207)
PMID:19808665
GO_REF:0000033		 RGD
GO_Central		 PMID:7930207 PMID:22247482 PMID:1328644 PMID:9851942 PMID:19808665 GO_REF:0000033, RGD:728713, RGD:1598435, RGD:12793009 NCBI chr 2:184,602,407...184,621,952
Ensembl chr 2:184,564,475...184,621,952 		JBrowse link
G Gja6 gap junction protein, alpha 6 part_of IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr  X:33,840,689...33,845,585
Ensembl chr  X:33,840,549...33,845,614 		JBrowse link
G Gja8 gap junction protein, alpha 8 part_of IDA
ISO
IBA		 (PMID:19756179)
GO_REF:0000033		 RGD
GO_Central		 PMID:19756179 PMID:16123426 GO_REF:0000033, RGD:1598965 NCBI chr 2:184,490,840...184,492,456
Ensembl chr 2:184,490,840...184,492,456 		JBrowse link
G Gjb1 gap junction protein, beta 1 part_of IEA
IBA		 GO_REF:0000002
GO_REF:0000033		 InterPro
GO_Central		 GO_REF:0000002 GO_REF:0000033 NCBI chr  X:66,501,848...66,509,783
Ensembl chr  X:66,501,820...66,509,925 		JBrowse link
G Gjb2 gap junction protein, beta 2 part_of ISO
ISS
IBA		 (PMID:21094651)
GO_REF:0000024
GO_REF:0000033
(PMID:15692151)		 RGD
UniProt
GO_Central		 PMID:15692151 PMID:21094651 GO_REF:0000024 GO_REF:0000033 NCBI chr15:31,260,390...31,278,222
Ensembl chr15:31,260,357...31,278,177 		JBrowse link
G Gjb3 gap junction protein, beta 3 part_of IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr 5:139,649,227...139,654,970
Ensembl chr 5:139,649,195...139,654,980 		JBrowse link
G Gjb4 gap junction protein, beta 4 part_of ISS
IEA
IBA
ISO		 GO_REF:0000024
GO_REF:0000107
GO_REF:0000033
(PMID:15692151)		 UniProt
Ensembl
GO_Central
RGD		 PMID:15692151 GO_REF:0000024 GO_REF:0000033 GO_REF:0000107 NCBI chr 5:139,675,776...139,679,551
Ensembl chr 5:139,675,780...139,679,667 		JBrowse link
G Gjb5 gap junction protein, beta 5 part_of IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr 5:139,680,670...139,683,588
Ensembl chr 5:139,680,671...139,683,583 		JBrowse link
G Gjb6 gap junction protein, beta 6 part_of IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr15:31,284,561...31,294,552
Ensembl chr15:31,284,419...31,294,582 		JBrowse link
G Gjc1 gap junction protein, gamma 1 part_of ISO
IBA		 (PMID:7930207)
GO_REF:0000033
MGI:2384150 (PMID:15879306)		 RGD
GO_Central		 PMID:7930207 PMID:15879306 GO_REF:0000033 NCBI chr10:87,758,192...87,785,443
Ensembl chr10:87,760,528...87,785,867 		JBrowse link
G Gjc2 gap junction protein, gamma 2 part_of IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr10:43,962,642...43,971,358
Ensembl chr10:43,962,642...43,970,467 		JBrowse link
G Gjc3 gap junction protein, gamma 3 part_of IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr12:16,899,846...16,912,309
Ensembl chr12:16,896,813...16,964,246 		JBrowse link
G Gjd2 gap junction protein, delta 2 part_of IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr 3:100,771,450...100,776,134
Ensembl chr 3:100,772,062...100,775,061 		JBrowse link
G Gjd3 gap junction protein, delta 3 part_of ISO
IBA		 (PMID:12154091)
GO_REF:0000033
MGI:95718 (PMID:15879306)		 RGD
GO_Central		 PMID:12154091 PMID:15879306 GO_REF:0000033 NCBI chr10:83,933,694...83,935,759
Ensembl chr10:83,934,135...83,934,971 		JBrowse link
G Gjd4 gap junction protein, delta 4 part_of IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr17:57,348,844...57,352,601
Ensembl chr17:57,349,877...57,352,446 		JBrowse link
G Gje1 gap junction protein, epsilon 1 part_of IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr 1:9,085,789...9,088,204
Ensembl chr 1:9,086,348...9,088,138 		JBrowse link
Term paths to the root
Path 1
Term Annotations click to browse term
  cellular_component 21321
    cellular anatomical structure 21026
      cell junction 2598
        anchoring junction 739
          cell-cell junction 551
            gap junction 32
              connexin complex 20
paths to the root