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ONTOLOGY REPORT - ANNOTATIONS


Term:cell-cell junction
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Accession:GO:0005911 term browser browse the term
Definition:A cell junction that forms a connection between two or more cells of an organism; excludes direct cytoplasmic intercellular bridges, such as ring canals in insects.
Synonyms:exact_synonym: intercellular junction
 broad_synonym: cell-cell contact region;   cell-cell contact zone
 xref: NIF_Subcellular:sao1922892319


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cell-cell junction term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Actb actin beta located_in ISO (PMID:25753039) ARUK-UCL PMID:25753039 NCBI chrNW_004624740:28,087,051...28,090,359
Ensembl chrNW_004624740:28,087,736...28,090,512
JBrowse link
G Actg1 actin gamma 1 located_in ISO (PMID:22855531) ARUK-UCL PMID:22855531 NCBI chrNW_004624801:10,496,876...10,499,737
Ensembl chrNW_004624801:10,496,718...10,499,637
JBrowse link
G Actn1 actinin alpha 1 located_in ISO (PMID:11223950) UniProt PMID:11223950 NCBI chrNW_004624734:32,097,364...32,190,162
Ensembl chrNW_004624734:32,097,671...32,192,729
JBrowse link
G Actn4 actinin alpha 4 located_in ISO (PMID:18332111) UniProt PMID:18332111 NCBI chrNW_004624794:12,042,627...12,113,762
Ensembl chrNW_004624794:12,042,533...12,113,886
JBrowse link
G Actr3 actin related protein 3 located_in ISO (PMID:23793062) RGD
MGI
PMID:22319661 PMID:23793062 RGD:11530045 NCBI chrNW_004624732:31,360,804...31,427,885
Ensembl chrNW_004624732:31,361,147...31,427,811
JBrowse link
G Adam17 ADAM metallopeptidase domain 17 located_in ISO (PMID:14970227) BHF-UCL PMID:14970227 NCBI chrNW_004624969:212,089...254,532
Ensembl chrNW_004624969:212,321...253,328
JBrowse link
G Add3 adducin 3 located_in ISO (PMID:1864459) MGI PMID:1864459 NCBI chrNW_004624737:36,091,671...36,256,398 JBrowse link
G Adgrl3 adhesion G protein-coupled receptor L3 located_in ISO (PMID:22405201) UniProt PMID:22405201 NCBI chrNW_004624761:7,219,269...8,101,988
Ensembl chrNW_004624761:7,242,948...7,804,418
JBrowse link
G Afdn afadin, adherens junction formation factor located_in IEA InterPro GO_REF:0000002 NCBI chrNW_004624785:11,549,805...11,698,029
Ensembl chrNW_004624785:11,551,687...11,697,921
JBrowse link
G Ahi1 Abelson helper integration site 1 located_in ISO (PMID:18633336) UniProt PMID:18633336 NCBI chrNW_004624886:2,189,753...2,403,174
Ensembl chrNW_004624886:2,189,655...2,397,364
JBrowse link
G Ajuba ajuba LIM protein located_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004624820:9,551,664...9,562,773
Ensembl chrNW_004624820:9,552,287...9,563,472
JBrowse link
G Akt1 AKT serine/threonine kinase 1 located_in ISO (PMID:23793062) MGI PMID:23793062 NCBI chrNW_004624734:507,880...525,295
Ensembl chrNW_004624734:509,368...525,295
JBrowse link
G Amtn amelotin located_in ISO PMID:16787391
(PMID:16787391)
HGNC-UCL PMID:16787391 RGD:2304068 NCBI chrNW_004624890:1,875,456...1,936,427 JBrowse link
G Apold1 apolipoprotein L domain containing 1 located_in ISO (PMID:35638551) UniProt PMID:35638551 NCBI chrNW_004624752:25,139,100...25,144,958
Ensembl chrNW_004624752:25,140,932...25,145,333
JBrowse link
G App amyloid beta precursor protein located_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004624745:13,904,912...14,159,374
Ensembl chrNW_004624745:13,902,577...14,159,372
JBrowse link
G Aqp3 aquaporin 3 (Gill blood group) located_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004624736:38,194,722...38,200,961
Ensembl chrNW_004624736:38,194,545...38,201,036
JBrowse link
G Aqp4 aquaporin 4 located_in ISO (PMID:12673830), (PMID:18718702) UniProt PMID:12673830 PMID:18718702 NCBI chrNW_004624770:5,581,192...5,593,470
Ensembl chrNW_004624770:5,580,808...5,594,628
JBrowse link
G Aqp7 aquaporin 7 located_in ISO (PMID:18718702) UniProt PMID:18718702 NCBI chrNW_004624736:38,130,992...38,148,444 JBrowse link
G Arhgef6 Rac/Cdc42 guanine nucleotide exchange factor 6 located_in ISO (PMID:23793062) MGI PMID:23793062 NCBI chrNW_004624808:10,320,388...10,464,081
Ensembl chrNW_004624808:10,319,793...10,465,514
JBrowse link
G Cadm1 cell adhesion molecule 1 located_in ISO (PMID:12826663), (PMID:22512338) MGI PMID:12826663 PMID:22512338 NCBI chrNW_004624784:10,595,876...10,933,024
Ensembl chrNW_004624784:10,591,824...10,932,981
JBrowse link
G Cadm3 cell adhesion molecule 3 located_in ISO (PMID:15893517) MGI PMID:15893517 NCBI chrNW_004624794:2,125,741...2,154,346
Ensembl chrNW_004624794:2,125,821...2,154,557
JBrowse link
G Capza1 capping actin protein of muscle Z-line subunit alpha 1 located_in ISO (PMID:23793062) MGI PMID:23793062 NCBI chrNW_004624772:8,407,883...8,455,734 JBrowse link
G Carmil2 capping protein regulator and myosin 1 linker 2 located_in ISO (PMID:23793062) MGI PMID:23793062 NCBI chrNW_004624746:18,692,179...18,704,952
Ensembl chrNW_004624746:18,692,225...18,704,476
JBrowse link
G Cask calcium/calmodulin dependent serine protein kinase located_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004624762:13,723,347...14,106,844
Ensembl chrNW_004624762:13,722,691...14,106,844
JBrowse link
G Cd2 CD2 molecule located_in ISO (PMID:23793062) MGI PMID:23793062 NCBI chrNW_004624772:12,428,885...12,445,003
Ensembl chrNW_004624772:12,433,796...12,444,740
JBrowse link
G Cd2ap CD2 associated protein located_in ISO (PMID:23793062) MGI PMID:23793062 NCBI chrNW_004624754:13,420,594...13,511,672
Ensembl chrNW_004624754:13,420,603...13,511,523
JBrowse link
G Cd3e CD3e molecule located_in ISO (PMID:23793062) MGI PMID:23793062 NCBI chrNW_004624784:13,714,667...13,726,881
Ensembl chrNW_004624784:13,712,920...13,726,950
JBrowse link
G Cd53 CD53 molecule located_in ISO (PMID:22847234) UniProt PMID:22847234 NCBI chrNW_004624772:6,630,152...6,660,871
Ensembl chrNW_004624772:6,630,123...6,661,599
JBrowse link
G Cdc42 cell division cycle 42 located_in ISO (PMID:23793062) MGI PMID:23793062 NCBI chrNW_004624764:6,874,453...6,891,952 JBrowse link
G Cdc42bpa CDC42 binding protein kinase alpha located_in ISO PMID:9418861 UniProt PMID:9418861 RGD:632451 NCBI chrNW_004624771:12,314,566...12,591,071
Ensembl chrNW_004624771:12,314,570...12,591,015
JBrowse link
G Cdh1 cadherin 1 located_in ISO (PMID:22841714)
(PMID:11511678), (PMID:15084279), (PMID:15195140), (PMID:17138661), (PMID:18423437), (PMID:18604197), (PMID:18816447), (PMID:20089884), (PMID:20103531), (PMID:21377456), (PMID:21464233), (PMID:21991325), (PMID:23990464), (PMID:24036311), (PMID:26750727), (PMID:9864371), (PMID:9950951)
MGI PMID:9864371 PMID:9950951 PMID:11511678 PMID:15084279 PMID:15195140 More... NCBI chrNW_004624746:17,480,472...17,557,722
Ensembl chrNW_004624746:17,483,469...17,557,581
JBrowse link
G Cdh2 cadherin 2 located_in IEA Ensembl
UniProt
GO_REF:0000107 GO_REF:0000117 NCBI chrNW_004624770:4,333,643...4,540,817
Ensembl chrNW_004624770:4,334,202...4,545,470
JBrowse link
G Cdh24 cadherin 24 located_in ISO (PMID:12734196) MGI PMID:12734196 NCBI chrNW_004624820:9,484,779...9,494,891
Ensembl chrNW_004624820:9,485,919...9,494,990
JBrowse link
G Cdh5 cadherin 5 located_in ISO (PMID:15572031), (PMID:19996314), (PMID:20332120), (PMID:21168935), (PMID:23288152)
(PMID:15861137), (PMID:21884682)
UniProt
MGI
PMID:15572031 PMID:15861137 PMID:19996314 PMID:20332120 PMID:21168935 More... NCBI chrNW_004624746:20,028,952...20,068,029
Ensembl chrNW_004624746:20,033,008...20,057,595
JBrowse link
G Cdhr3 cadherin related family member 3 located_in IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004624739:23,629,235...23,693,267 JBrowse link
G Cfl1 cofilin 1 located_in ISO (PMID:23793062) MGI PMID:23793062 NCBI chrNW_004624767:20,574,884...20,578,413
Ensembl chrNW_004624767:20,574,966...20,579,796
JBrowse link
G Cldn1 claudin 1 located_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004624730:66,885,674...66,902,345
Ensembl chrNW_004624730:66,885,319...66,903,079
JBrowse link
G Cldn18 claudin 18 located_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004624730:14,500,379...14,522,047
Ensembl chrNW_004624730:14,489,585...14,522,042
JBrowse link
G Cldn2 claudin 2 located_in ISO (PMID:21415414) ARUK-UCL PMID:21415414 NCBI chrNW_004624803:9,839,916...9,849,891
Ensembl chrNW_004624803:9,839,911...9,846,367
JBrowse link
G Cldn3 claudin 3 located_in ISO (PMID:18774778)
(PMID:12734665)
ARUK-UCL PMID:12734665 PMID:18774778 NCBI chrNW_004624740:14,065,172...14,066,432
Ensembl chrNW_004624740:14,065,478...14,066,137
JBrowse link
G Cldn4 claudin 4 located_in ISO (PMID:18774778) ARUK-UCL PMID:18774778 NCBI chrNW_004624740:14,033,848...14,035,854 JBrowse link
G Cldn5 claudin 5 located_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004624747:164,113...166,502
Ensembl chrNW_004624747:164,761...165,417
JBrowse link
G Clic4 chloride intracellular channel 4 located_in ISO (PMID:14569596) UniProt PMID:14569596 NCBI chrNW_004624764:9,088,352...9,149,194 JBrowse link
G Col13a1 collagen type XIII alpha 1 chain located_in ISO (PMID:11470398) MGI PMID:11470398 NCBI chrNW_004624754:4,016,873...4,163,065
Ensembl chrNW_004624754:4,017,900...4,162,764
JBrowse link
G Coro1a coronin 1A located_in ISO (PMID:23793062) MGI PMID:23793062 NCBI chrNW_004624782:13,106,416...13,111,394
Ensembl chrNW_004624782:13,105,153...13,111,357
JBrowse link
G Crb1 crumbs cell polarity complex component 1 located_in ISO (PMID:17234588) MGI PMID:17234588 NCBI chrNW_004624798:2,861,481...2,999,387
Ensembl chrNW_004624798:2,861,520...2,999,697
JBrowse link
G Csk C-terminal Src kinase located_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004624894:12,621...29,400
Ensembl chrNW_004624894:24,203...29,668
JBrowse link
G Ctnna1 catenin alpha 1 located_in ISO
IEA
RGD
UniProt
PMID:15197645 GO_REF:0000117 RGD:2289803 NCBI chrNW_004624743:31,512,481...31,700,340 JBrowse link
G Ctnna2 catenin alpha 2 located_in IEA UniProt GO_REF:0000117 NCBI chrNW_004624749:22,332,750...23,546,165
Ensembl chrNW_004624749:22,333,710...23,412,593
JBrowse link
G Ctnna3 catenin alpha 3 located_in IEA UniProt GO_REF:0000117 NCBI chrNW_004624754:285,469...2,182,218
Ensembl chrNW_004624754:285,857...2,034,582
JBrowse link
G Ctnnal1 catenin alpha like 1 located_in IEA UniProt GO_REF:0000117 NCBI chrNW_004624758:2,504,277...2,568,135
Ensembl chrNW_004624758:2,504,371...2,567,400
JBrowse link
G Ctnnb1 catenin beta 1 located_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004624730:77,876,361...77,887,228
Ensembl chrNW_004624730:77,875,257...77,887,234
JBrowse link
G Ctnnd1 catenin delta 1 located_in ISO (PMID:23990464)
(PMID:12370829), (PMID:18343367)
ARUK-UCL
UniProt
PMID:12370829 PMID:18343367 PMID:23990464 NCBI chrNW_004624864:2,953,357...3,000,355
Ensembl chrNW_004624864:2,951,556...3,006,529
JBrowse link
G Cxadr CXADR Ig-like cell adhesion molecule located_in ISO (PMID:17675666), (PMID:20235596)
(PMID:16678988)
UniProt
MGI
PMID:16678988 PMID:17675666 PMID:20235596 NCBI chrNW_004624745:5,900,933...5,954,584
Ensembl chrNW_004624745:5,900,886...5,958,765
JBrowse link
G Cxcr4 C-X-C motif chemokine receptor 4 located_in ISO (PMID:23793062) MGI PMID:23793062 NCBI chrNW_004624732:35,473,740...35,477,482
Ensembl chrNW_004624732:35,472,760...35,477,528
JBrowse link
G Dag1 dystroglycan 1 located_in ISO (PMID:23793062) MGI PMID:23793062 NCBI chrNW_004624730:3,417,356...3,488,300
Ensembl chrNW_004624730:3,417,347...3,488,879
JBrowse link
G Dbn1 drebrin 1 located_in ISO (PMID:15084279) RGD
MGI
PMID:15084279 PMID:22319661 RGD:11530045 NCBI chrNW_004624733:12,616,537...12,631,967
Ensembl chrNW_004624733:12,616,423...12,632,133
JBrowse link
G Dchs1 dachsous cadherin-related 1 located_in IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004624817:8,111,714...8,147,699
Ensembl chrNW_004624817:8,111,718...8,134,342
JBrowse link
G Def6 DEF6 guanine nucleotide exchange factor located_in ISO (PMID:23793062) MGI PMID:23793062 NCBI chrNW_004624754:22,092,579...22,124,804
Ensembl chrNW_004624754:22,092,585...22,124,787
JBrowse link
G Des desmin located_in IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004624823:5,624,958...5,632,234
Ensembl chrNW_004624823:5,622,283...5,632,283
JBrowse link
G Dlg1 discs large MAGUK scaffold protein 1 located_in ISO (PMID:21615688) UniProt PMID:21615688 NCBI chrNW_004624730:62,001,547...62,223,098
Ensembl chrNW_004624730:62,002,280...62,223,319
JBrowse link
G Dlg3 discs large MAGUK scaffold protein 3 located_in ISO (PMID:21920314) MGI PMID:21920314 NCBI chrNW_004624903:409,721...473,422
Ensembl chrNW_004624903:409,709...473,659
JBrowse link
G Dlg4 discs large MAGUK scaffold protein 4 located_in ISO PMID:26595655 UniProt PMID:26595655 RGD:11085699 NCBI chrNW_004624786:9,811,201...9,835,660
Ensembl chrNW_004624786:9,811,780...9,837,100
JBrowse link
G Dnmbp dynamin binding protein located_in ISO (PMID:17015620) UniProt PMID:17015620 NCBI chrNW_004624737:11,715,311...11,821,882 JBrowse link
G Dsg1 desmoglein 1 located_in ISO (PMID:7983064) BHF-UCL PMID:7983064 NCBI chrNW_004624770:1,514,978...1,551,437
Ensembl chrNW_004624770:1,517,027...1,542,322
JBrowse link
G Dsg3 desmoglein 3 located_in ISO (PMID:18343367) UniProt PMID:18343367 NCBI chrNW_004624770:1,384,847...1,416,833 JBrowse link
G Dsp desmoplakin located_in ISO (PMID:19001636), (PMID:9864371) MGI PMID:9864371 PMID:19001636 NCBI chrNW_004624756:18,036,103...18,083,379
Ensembl chrNW_004624756:18,035,892...18,083,336
JBrowse link
G Ect2 epithelial cell transforming 2 located_in ISO (PMID:15254234) UniProt PMID:15254234 NCBI chrNW_004624730:50,773,465...50,841,427
Ensembl chrNW_004624730:50,773,566...50,840,510
JBrowse link
G Epb41l3 erythrocyte membrane protein band 4.1 like 3 located_in ISO (PMID:12234973) HGNC-UCL PMID:12234973 NCBI chrNW_004624770:15,092,706...15,303,990
Ensembl chrNW_004624770:15,094,969...15,287,128
JBrowse link
G F11r F11 receptor ISO RGD PMID:18506084 RGD:7488940 NCBI chrNW_004624794:346,281...367,132
Ensembl chrNW_004624794:346,387...367,428
JBrowse link
G Fabp7 fatty acid binding protein 7 located_in ISO (PMID:25433207) MGI PMID:25433207 NCBI chrNW_004624798:8,426,819...8,430,949
Ensembl chrNW_004624798:8,426,825...8,430,939
JBrowse link
G Fat1 FAT atypical cadherin 1 located_in ISO (PMID:15148305) UniProt PMID:15148305 NCBI chrNW_004624769:17,801,796...17,924,685
Ensembl chrNW_004624769:17,801,894...17,925,191
JBrowse link
G Fat2 FAT atypical cadherin 2 located_in IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004624733:37,427,330...37,520,756
Ensembl chrNW_004624733:37,433,349...37,520,756
JBrowse link
G Fat4 FAT atypical cadherin 4 located_in IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004624777:6,095,166...6,293,142
Ensembl chrNW_004624777:6,095,643...6,292,980
JBrowse link
G Fgfr4 fibroblast growth factor receptor 4 located_in ISO (PMID:20798051) UniProt PMID:20798051 NCBI chrNW_004624733:12,964,893...12,979,198
Ensembl chrNW_004624733:12,964,746...12,976,732
JBrowse link
G Flna filamin A located_in ISO (PMID:16291724) UniProt PMID:16291724 NCBI chrNW_004624946:812,278...836,307
Ensembl chrNW_004624946:812,287...837,273
JBrowse link
G Flot1 flotillin 1 located_in ISO (PMID:25468996) BHF-UCL PMID:25468996 NCBI chrNW_004624754:24,992,961...25,000,463
Ensembl chrNW_004624754:24,992,929...25,003,759
JBrowse link
G Flrt1 fibronectin leucine rich transmembrane protein 1 located_in ISO (PMID:16872596), (PMID:20421966) UniProt PMID:16872596 PMID:20421966 NCBI chrNW_004624767:22,167,309...22,248,680
Ensembl chrNW_004624767:22,169,616...22,189,578
JBrowse link
G Flrt2 fibronectin leucine rich transmembrane protein 2 located_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004624734:16,587,367...16,674,998
Ensembl chrNW_004624734:16,587,357...16,676,063
JBrowse link
G Flrt3 fibronectin leucine rich transmembrane protein 3 located_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004624741:15,343,304...15,355,742
Ensembl chrNW_004624741:15,343,653...15,355,727
JBrowse link
G Fndc1 fibronectin type III domain containing 1 located_in ISO PMID:19723622 MGI PMID:19723622 RGD:8554041 NCBI chrNW_004624929:395,766...495,288
Ensembl chrNW_004624929:395,705...460,563
JBrowse link
G Frs2 fibroblast growth factor receptor substrate 2 located_in IEA Ensembl
TreeGrafter
GO_REF:0000107 GO_REF:0000118 NCBI chrNW_004624750:28,224,289...28,359,473 JBrowse link
G Fscn1 fascin actin-bundling protein 1 located_in ISO (PMID:9571235) UniProt PMID:9571235 NCBI chrNW_004624740:28,038,216...28,047,252
Ensembl chrNW_004624740:28,036,731...28,047,364
JBrowse link
G Fzd4 frizzled class receptor 4 located_in ISO (PMID:15195140) MGI PMID:15195140 NCBI chrNW_004624845:2,972,308...3,055,596
Ensembl chrNW_004624845:3,046,063...3,050,560
JBrowse link
G Gab1 GRB2 associated binding protein 1 located_in ISO (PMID:26706435) ARUK-UCL PMID:26706435 NCBI chrNW_004624853:2,639,882...2,763,195
Ensembl chrNW_004624853:2,639,891...2,765,144
JBrowse link
G Gja1 gap junction protein alpha 1 located_in ISO (PMID:7593302)
(PMID:15084279), (PMID:15331634), (PMID:21296051)
AgBase
MGI
PMID:7593302 PMID:15084279 PMID:15331634 PMID:21296051 NCBI chrNW_004624798:9,358,996...9,364,413
Ensembl chrNW_004624798:9,359,004...9,364,313
JBrowse link
G Gjb3 gap junction protein beta 3 located_in ISO (PMID:7889986) MGI PMID:7889986 NCBI chrNW_004624764:17,829,214...17,833,509
Ensembl chrNW_004624764:17,829,467...17,833,465
JBrowse link
G Grb2 growth factor receptor bound protein 2 located_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004624801:5,143,239...5,219,136
Ensembl chrNW_004624801:5,143,141...5,219,244
JBrowse link
G Grhl2 grainyhead like transcription factor 2 located_in ISO (PMID:25152456) UniProt PMID:25152456 NCBI chrNW_004624763:18,784,815...18,916,358
Ensembl chrNW_004624763:18,784,187...18,916,358
JBrowse link
G Gria1 glutamate ionotropic receptor AMPA type subunit 1 located_in ISO PMID:26595655 UniProt PMID:26595655 RGD:11085699 NCBI chrNW_004624733:35,337,039...35,648,184
Ensembl chrNW_004624733:35,339,683...35,647,349
JBrowse link
G Heg1 heart development protein with EGF like domains 1 located_in ISO (PMID:26780829)
(PMID:19151727)
UniProt
MGI
PMID:19151727 PMID:26780829 NCBI chrNW_004624731:1,015,889...1,092,875
Ensembl chrNW_004624731:1,020,805...1,092,995
JBrowse link
G Hepacam hepatic and glial cell adhesion molecule located_in ISO (PMID:21419380) MGI PMID:21419380 NCBI chrNW_004624927:922,272...939,429
Ensembl chrNW_004624927:919,908...939,762
JBrowse link
G Hpn hepsin located_in ISO (PMID:17620368) UniProt PMID:17620368 NCBI chrNW_004624794:8,426,005...8,439,758
Ensembl chrNW_004624794:8,421,791...8,439,782
JBrowse link
G Igsf11 immunoglobulin superfamily member 11 located_in ISO (PMID:26595655) UniProt PMID:26595655 NCBI chrNW_004624731:29,109,803...29,272,322
Ensembl chrNW_004624731:29,109,879...29,276,256
JBrowse link
G Ilk integrin linked kinase ISO ectoplasmic specializations in seminiferous epithelium RGD PMID:11133699 RGD:2302097 NCBI chrNW_004624817:8,096,539...8,103,096
Ensembl chrNW_004624817:8,096,898...8,106,683
JBrowse link
G Iqgap1 IQ motif containing GTPase activating protein 1 located_in ISO (PMID:18604197) MGI PMID:18604197 NCBI chrNW_004624768:17,703,113...17,797,922
Ensembl chrNW_004624768:17,702,728...17,799,022
JBrowse link
G Iqgap3 IQ motif containing GTPase activating protein 3 located_in ISO (PMID:18604197) MGI PMID:18604197 NCBI chrNW_004624885:1,730,079...1,765,250
Ensembl chrNW_004624885:1,730,771...1,765,180
JBrowse link
G Itga4 integrin subunit alpha 4 located_in ISO (PMID:23610556) MGI PMID:23610556 NCBI chrNW_004624844:3,264,794...3,353,355
Ensembl chrNW_004624844:3,265,110...3,354,087
JBrowse link
G Itga5 integrin subunit alpha 5 located_in ISO (PMID:14970227) BHF-UCL PMID:14970227 NCBI chrNW_004624904:2,418,140...2,439,945
Ensembl chrNW_004624904:2,417,269...2,440,087
JBrowse link
G Itgal integrin subunit alpha L located_in ISO (PMID:23793062) MGI PMID:23793062 NCBI chrNW_004624782:13,635,217...13,671,401
Ensembl chrNW_004624782:13,640,996...13,669,541
JBrowse link
G Itgb1 integrin subunit beta 1 ISO ectoplasmic specializations in seminiferous epithelium RGD PMID:11133699 RGD:2302097 NCBI chrNW_004624805:8,748,848...8,800,259
Ensembl chrNW_004624805:8,765,949...8,802,149
JBrowse link
G Itgb3 integrin subunit beta 3 located_in ISO (PMID:19461049) ARUK-UCL PMID:19461049 NCBI chrNW_004624849:1,895,378...1,952,755
Ensembl chrNW_004624849:1,895,914...1,952,665
JBrowse link
G Itk IL2 inducible T cell kinase located_in ISO (PMID:23793062) MGI PMID:23793062 NCBI chrNW_004624733:32,125,005...32,198,901
Ensembl chrNW_004624733:32,127,388...32,198,869
JBrowse link
G Jam3 junctional adhesion molecule 3 located_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004624812:8,644,002...8,707,257
Ensembl chrNW_004624812:8,643,921...8,707,351
JBrowse link
G Jcad junctional cadherin 5 associated located_in IEA InterPro GO_REF:0000002 NCBI chrNW_004624805:2,819,299...2,901,394
Ensembl chrNW_004624805:2,819,751...2,902,430
JBrowse link
G Jup junction plakoglobin located_in ISO (PMID:10460003), (PMID:14661054), (PMID:1639850), (PMID:7650039), (PMID:7983064)
(PMID:12847106), (PMID:18816447), (PMID:21296051)
UniProt
MGI
RGD
PMID:1639850 PMID:7650039 PMID:7983064 PMID:10460003 PMID:12478657 More... RGD:633036 NCBI chrNW_004624795:1,954,733...1,972,080
Ensembl chrNW_004624795:1,954,290...1,975,018
JBrowse link
G Kirrel1 kirre like nephrin family adhesion molecule 1 located_in ISO
IEA
RGD
TreeGrafter
PMID:12646566 GO_REF:0000118 RGD:1299583 NCBI chrNW_004624794:2,824,716...2,922,300
Ensembl chrNW_004624794:2,829,496...2,922,352
JBrowse link
G Kirrel2 kirre like nephrin family adhesion molecule 2 located_in IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004624794:10,138,586...10,148,506
Ensembl chrNW_004624794:10,139,423...10,148,516
JBrowse link
G Kirrel3 kirre like nephrin family adhesion molecule 3 located_in IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004624812:561,290...1,158,012
Ensembl chrNW_004624812:562,308...1,154,934
JBrowse link
G Kit KIT proto-oncogene, receptor tyrosine kinase located_in ISO (PMID:23284756) MGI PMID:23284756 NCBI chrNW_004624761:14,733,912...14,831,428 JBrowse link
G Krit1 KRIT1 ankyrin repeat containing located_in ISO (PMID:20332120), (PMID:23007647) UniProt PMID:20332120 PMID:23007647 NCBI chrNW_004624809:978,391...1,036,313
Ensembl chrNW_004624809:978,789...1,039,091
JBrowse link
G Krt8 keratin 8 located_in ISO (PMID:23266329) MGI PMID:23266329 NCBI chrNW_004624904:970,136...978,211 JBrowse link
G Lama1 laminin subunit alpha 1 located_in ISO (PMID:19319192), (PMID:19531352), (PMID:20123909), (PMID:21131290) MGI PMID:19319192 PMID:19531352 PMID:20123909 PMID:21131290 NCBI chrNW_004624770:16,358,952...16,490,986
Ensembl chrNW_004624770:16,359,255...16,462,817
JBrowse link
G Lat linker for activation of T cells located_in ISO (PMID:23793062) MGI PMID:23793062 NCBI chrNW_004624782:12,795,104...12,799,496
Ensembl chrNW_004624782:12,795,104...12,799,410
JBrowse link
G Lck LCK proto-oncogene, Src family tyrosine kinase located_in ISO (PMID:23793062) MGI PMID:23793062 NCBI chrNW_004624764:15,469,582...15,495,351
Ensembl chrNW_004624764:15,472,685...15,495,351
JBrowse link
G Lcp2 lymphocyte cytosolic protein 2 located_in ISO (PMID:23793062) MGI PMID:23793062 NCBI chrNW_004624733:19,625,276...19,720,125
Ensembl chrNW_004624733:19,672,868...19,719,584
JBrowse link
G Lims1 LIM zinc finger domain containing 1 located_in IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004624749:11,720,492...11,846,571 JBrowse link
G Lims2 LIM zinc finger domain containing 2 located_in IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004624732:14,102,543...14,144,479
Ensembl chrNW_004624732:14,102,543...14,144,722
JBrowse link
G Lin7b lin-7 homolog B, crumbs cell polarity complex component ISO RGD PMID:10362251 RGD:633233 NCBI chrNW_004624832:4,965,537...4,968,574
Ensembl chrNW_004624832:4,965,537...4,968,516
JBrowse link
G Lin7c lin-7 homolog C, crumbs cell polarity complex component located_in ISO (PMID:23201090) RGD
UniProt
PMID:10362251 PMID:23201090 RGD:633233 NCBI chrNW_004624766:17,159,205...17,167,119
Ensembl chrNW_004624766:17,161,179...17,167,073
JBrowse link
G LOC101711459 inactive ubiquitin carboxyl-terminal hydrolase 53 located_in IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004625870:17...3,804 JBrowse link
G LOC101715516 cadherin-related family member 4 located_in IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004624739:30,053,824...30,132,805 JBrowse link
G LOC101716577 tyrosine-protein kinase ZAP-70 located_in ISO (PMID:23793062) MGI PMID:23793062 NCBI chrNW_004624749:2,893,601...2,901,256
Ensembl chrNW_004624749:2,893,601...2,901,035
JBrowse link
G LOC101723513 inactive ubiquitin carboxyl-terminal hydrolase 53 located_in IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004626254:8...2,428 JBrowse link
G Magi1 membrane associated guanylate kinase, WW and PDZ domain containing 1 located_in IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004624888:46,089...686,823
Ensembl chrNW_004624888:46,214...687,291
JBrowse link
G Magi2 membrane associated guanylate kinase, WW and PDZ domain containing 2 located_in IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004624739:27,132,533...28,430,765
Ensembl chrNW_004624739:27,134,993...28,430,686
JBrowse link
G Magi3 membrane associated guanylate kinase, WW and PDZ domain containing 3 located_in IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004624772:9,108,214...9,375,367
Ensembl chrNW_004624772:9,108,294...9,371,724
JBrowse link
G Map2k2 mitogen-activated protein kinase kinase 2 located_in ISO (PMID:21615688) UniProt PMID:21615688 NCBI chrNW_004624828:5,489,085...5,511,166
Ensembl chrNW_004624828:5,488,814...5,511,445
JBrowse link
G Mapk15 mitogen-activated protein kinase 15 located_in ISO (PMID:29021280) UniProt PMID:29021280 NCBI chrNW_004624735:13,049,509...13,077,509
Ensembl chrNW_004624735:13,047,125...13,056,308
JBrowse link
G Micall2 MICAL like 2 located_in ISO (PMID:18332111) UniProt PMID:18332111 NCBI chrNW_004624740:26,928,330...26,947,671
Ensembl chrNW_004624740:26,928,449...26,946,957
JBrowse link
G Mlc1 modulator of VRAC current 1 located_in ISO (PMID:21419380)
(PMID:15367490)
MGI
UniProt
PMID:15367490 PMID:21419380 NCBI chrNW_004624752:653,224...675,875
Ensembl chrNW_004624752:654,076...675,863
JBrowse link
G Myadm myeloid associated differentiation marker located_in IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004624832:2,568,128...2,574,248
Ensembl chrNW_004624832:2,568,128...2,573,544
JBrowse link
G Myh2 myosin heavy chain 2 located_in ISO (PMID:25753039)
(PMID:23793062)
ARUK-UCL
MGI
PMID:23793062 PMID:25753039 NCBI chrNW_004624786:12,888,622...12,914,886 JBrowse link
G Mylk myosin light chain kinase located_in ISO (PMID:23793062) MGI PMID:23793062 NCBI chrNW_004624912:1,952,053...2,213,196
Ensembl chrNW_004624912:1,953,838...2,172,561
JBrowse link
G Ncam1 neural cell adhesion molecule 1 located_in ISO (PMID:23284756) MGI PMID:23284756 NCBI chrNW_004624784:8,339,582...8,635,025
Ensembl chrNW_004624784:8,339,916...8,636,012
JBrowse link
G Nck1 NCK adaptor protein 1 located_in ISO (PMID:23793062) MGI PMID:23793062 NCBI chrNW_004624730:13,271,575...13,366,930
Ensembl chrNW_004624730:13,226,315...13,366,661
JBrowse link
G Nectin2 nectin cell adhesion molecule 2 located_in ISO (PMID:9845526)
(PMID:15660130), (PMID:15728677)
BHF-UCL
MGI
PMID:9845526 PMID:15660130 PMID:15728677 NCBI chrNW_004624907:1,713,786...1,739,158
Ensembl chrNW_004624907:1,713,443...1,740,627
JBrowse link
G Nectin3 nectin cell adhesion molecule 3 located_in ISO (PMID:12759359), (PMID:15660130), (PMID:23990464) MGI PMID:12759359 PMID:15660130 PMID:23990464 NCBI chrNW_004624731:37,425,966...37,567,938
Ensembl chrNW_004624731:37,433,809...37,568,677
JBrowse link
G Ngfr nerve growth factor receptor located_in ISO (PMID:21300049) MGI PMID:21300049 NCBI chrNW_004624795:5,623,686...5,639,545
Ensembl chrNW_004624795:5,623,700...5,639,655
JBrowse link
G Nphp1 nephrocystin 1 located_in ISO (PMID:21565611) UniProt PMID:21565611 NCBI chrNW_004624749:1,725,515...1,779,787
Ensembl chrNW_004624749:1,725,598...1,779,344
JBrowse link
G Nphp4 nephrocystin 4 located_in ISO (PMID:21565611) UniProt PMID:21565611 NCBI chrNW_004624818:5,325,946...5,432,290
Ensembl chrNW_004624818:5,327,038...5,432,901
JBrowse link
G Nphs1 NPHS1 adhesion molecule, nephrin located_in IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004624794:10,117,464...10,138,511
Ensembl chrNW_004624794:10,116,777...10,135,963
JBrowse link
G Nphs2 NPHS2 stomatin family member, podocin located_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004624771:2,828,758...2,847,995
Ensembl chrNW_004624771:2,828,104...2,849,254
JBrowse link
G Ocln occludin located_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004624905:333,853...388,990
Ensembl chrNW_004624905:333,864...388,880
JBrowse link
G P2rx7 purinergic receptor P2X 7 located_in ISO (PMID:15331634) MGI PMID:15331634 NCBI chrNW_004624747:21,725,813...21,768,123
Ensembl chrNW_004624747:21,725,395...21,759,453
JBrowse link
G Pacsin2 protein kinase C and casein kinase substrate in neurons 2 located_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004624752:5,927,096...6,041,458
Ensembl chrNW_004624752:5,950,890...6,041,466
JBrowse link
G Pak1 p21 (RAC1) activated kinase 1 located_in ISO (PMID:12912914) UniProt PMID:12912914 NCBI chrNW_004624863:442,465...609,159
Ensembl chrNW_004624863:439,541...525,918
JBrowse link
G Pak2 p21 (RAC1) activated kinase 2 located_in ISO (PMID:25753039) ARUK-UCL PMID:25753039 NCBI chrNW_004624730:61,809,876...61,879,755
Ensembl chrNW_004624730:61,817,300...61,879,755
JBrowse link
G Pard3 par-3 family cell polarity regulator located_in ISO (PMID:20332120)
(PMID:15775979)
PMID:18550519
PMID:18082612
UniProt
MGI
PMID:15775979 PMID:18082612 PMID:18550519 PMID:20332120 RGD:8553352 RGD:8554471 NCBI chrNW_004624805:7,204,915...7,810,050
Ensembl chrNW_004624805:7,205,092...7,808,542
JBrowse link
G Pcdh12 protocadherin 12 located_in ISO (PMID:16269175), (PMID:9651350) MGI PMID:9651350 PMID:16269175 NCBI chrNW_004624774:1,157,208...1,171,109
Ensembl chrNW_004624774:1,157,208...1,170,678
JBrowse link
G Pcdh15 protocadherin related 15 located_in IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004624791:9,042,311...9,992,341
Ensembl chrNW_004624791:9,195,902...9,990,131
JBrowse link
G Pdxp pyridoxal phosphatase located_in ISO (PMID:23793062) MGI PMID:23793062 NCBI chrNW_004624752:10,244,424...10,251,072
Ensembl chrNW_004624752:10,243,135...10,251,082
JBrowse link
G Pdzd2 PDZ domain containing 2 located_in ISO PMID:10896674 UniProt PMID:10896674 RGD:633698 NCBI chrNW_004624759:22,408,934...22,677,825
Ensembl chrNW_004624759:22,411,491...22,677,911
JBrowse link
G Pecam1 platelet and endothelial cell adhesion molecule 1 located_in ISO (PMID:15572031) ARUK-UCL PMID:15572031 NCBI chrNW_004624870:33,293...122,536 JBrowse link
G Perp p53 apoptosis effector related to PMP22 located_in IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004624753:15,772,104...15,786,238
Ensembl chrNW_004624753:15,772,083...15,786,794
JBrowse link
G Pik3r1 phosphoinositide-3-kinase regulatory subunit 1 located_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004624815:1,290,106...1,376,961
Ensembl chrNW_004624815:1,289,997...1,369,610
JBrowse link
G Pikfyve phosphoinositide kinase, FYVE-type zinc finger containing located_in ISO (PMID:23793062) MGI PMID:23793062 NCBI chrNW_004624765:7,684,770...7,806,381
Ensembl chrNW_004624765:7,681,875...7,790,704
JBrowse link
G Pkd2 polycystin 2, transient receptor potential cation channel located_in ISO (PMID:15843396) BHF-UCL PMID:15843396 NCBI chrNW_004624872:4,539,965...4,592,004
Ensembl chrNW_004624872:4,539,847...4,594,793
JBrowse link
G Pkp2 plakophilin 2 located_in ISO (PMID:21296051)
(PMID:15479741)
(PMID:23884246)
MGI
UniProt
PMID:15479741 PMID:21296051 PMID:23884246 NCBI chrNW_004624778:3,261,446...3,344,204
Ensembl chrNW_004624778:3,261,390...3,342,850
JBrowse link
G Pkp3 plakophilin 3 located_in ISO (PMID:26173741) UniProt PMID:26173741 NCBI chrNW_004624766:22,015,928...22,024,313
Ensembl chrNW_004624766:22,015,928...22,022,840
JBrowse link
G Pkp4 plakophilin 4 located_in ISO (PMID:8937994) UniProt PMID:8937994 NCBI chrNW_004624732:6,970,728...7,208,842 JBrowse link
G Plcg1 phospholipase C gamma 1 located_in ISO (PMID:23793062) MGI PMID:23793062 NCBI chrNW_004624919:1,766,533...1,800,130
Ensembl chrNW_004624919:1,766,149...1,803,097
JBrowse link
G Plekha7 pleckstrin homology domain containing A7 located_in ISO (PMID:23990464) ARUK-UCL PMID:23990464 NCBI chrNW_004624766:8,421,069...8,655,016
Ensembl chrNW_004624766:8,421,188...8,655,236
JBrowse link
G Plekhg5 pleckstrin homology and RhoGEF domain containing G5 located_in ISO (PMID:21543326) UniProt PMID:21543326 NCBI chrNW_004624818:4,990,321...5,010,308
Ensembl chrNW_004624818:4,990,808...5,009,788
JBrowse link
G Poldip2 DNA polymerase delta interacting protein 2 ISO RGD PMID:17623671 RGD:124713560 NCBI chrNW_004624786:943,015...961,828
Ensembl chrNW_004624786:948,923...961,800
JBrowse link
G Prkcd protein kinase C delta located_in ISO (PMID:10882525) MGI PMID:10882525 NCBI chrNW_004624822:4,035,819...4,062,907
Ensembl chrNW_004624822:4,033,130...4,059,555
JBrowse link
G Prkcg protein kinase C gamma located_in ISO (PMID:23793062) MGI PMID:23793062 NCBI chrNW_004624832:2,548,286...2,566,365
Ensembl chrNW_004624832:2,547,535...2,566,402
JBrowse link
G Prkch protein kinase C eta located_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004624734:39,620,690...39,830,281
Ensembl chrNW_004624734:39,619,273...39,830,353
JBrowse link
G Prkcz protein kinase C zeta located_in ISO (PMID:20332120) UniProt PMID:20332120 NCBI chrNW_004624818:7,758,192...7,846,950
Ensembl chrNW_004624818:7,759,770...7,847,208
JBrowse link
G Prkd1 protein kinase D1 located_in ISO (PMID:10882525) MGI PMID:10882525 NCBI chrNW_004624820:2,408,562...2,726,199
Ensembl chrNW_004624820:2,408,360...2,726,606
JBrowse link
G Ptk7 protein tyrosine kinase 7 (inactive) located_in ISO (PMID:20837484)
(PMID:20215345)
UniProt
MGI
PMID:20215345 PMID:20837484 NCBI chrNW_004624754:16,386,437...16,441,341
Ensembl chrNW_004624754:16,386,296...16,440,681
JBrowse link
G Ptpn6 protein tyrosine phosphatase non-receptor type 6 located_in ISO (PMID:23793062) MGI PMID:23793062 NCBI chrNW_004624860:3,580,225...3,595,403
Ensembl chrNW_004624860:3,580,560...3,595,090
JBrowse link
G Ptprj protein tyrosine phosphatase receptor type J located_in ISO (PMID:12370829), (PMID:19332538) UniProt PMID:12370829 PMID:19332538 NCBI chrNW_004624767:942,786...1,051,112
Ensembl chrNW_004624767:945,553...1,051,138
JBrowse link
G Ptprk protein tyrosine phosphatase receptor type K located_in ISO (PMID:8663237) UniProt PMID:8663237 NCBI chrNW_004624753:2,357,800...2,878,176
Ensembl chrNW_004624753:2,357,680...2,877,981
JBrowse link
G Ptprm protein tyrosine phosphatase receptor type M located_in
is_active_in
ISO (PMID:15491993), (PMID:16380380)
(PMID:10753936)
UniProt PMID:10753936 PMID:15491993 PMID:16380380 NCBI chrNW_004624770:16,900,925...17,507,775
Ensembl chrNW_004624770:16,990,056...17,508,167
JBrowse link
G Ptpru protein tyrosine phosphatase receptor type U located_in ISO (PMID:12501215) UniProt PMID:12501215 NCBI chrNW_004624764:12,994,562...13,072,723
Ensembl chrNW_004624764:12,994,521...13,073,251
JBrowse link
G Pxn paxillin located_in ISO (PMID:25753039) ARUK-UCL PMID:25753039 NCBI chrNW_004624747:13,371,128...13,435,619
Ensembl chrNW_004624747:13,370,243...13,435,714
JBrowse link
G Rab13 RAB13, member RAS oncogene family located_in ISO (PMID:11025210) MGI PMID:11025210 NCBI chrNW_004624885:3,239,581...3,243,539
Ensembl chrNW_004624885:3,239,595...3,243,539
JBrowse link
G Rap1b RAP1B, member of RAS oncogene family located_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004624948:623,527...664,044
Ensembl chrNW_004624948:623,527...664,000
JBrowse link
G Rapgef2 Rap guanine nucleotide exchange factor 2 located_in ISO (PMID:10873669) UniProt PMID:10873669 NCBI chrNW_004624848:3,968,845...4,184,740
Ensembl chrNW_004624848:3,968,362...4,182,885
JBrowse link
G Rasip1 Ras interacting protein 1 located_in IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004624832:5,176,697...5,189,673
Ensembl chrNW_004624832:5,177,092...5,189,471
JBrowse link
G Rho rhodopsin located_in ISO (PMID:23793062) MGI PMID:23793062 NCBI chrNW_004624872:523,892...528,278
Ensembl chrNW_004624872:523,912...527,615
JBrowse link
G Rpgrip1l RPGRIP1 like located_in ISO (PMID:21565611) UniProt PMID:21565611 NCBI chrNW_004624757:3,080,162...3,172,750
Ensembl chrNW_004624757:3,079,712...3,172,115
JBrowse link
G Scrib scribble planar cell polarity protein located_in ISO (PMID:15649318), (PMID:27380321) RGD
UniProt
PMID:15649318 PMID:17081755 PMID:27380321 RGD:2303059 NCBI chrNW_004624735:12,997,358...13,018,765
Ensembl chrNW_004624735:12,997,408...13,018,533
JBrowse link
G Sdccag8 SHH signaling and ciliogenesis regulator SDCCAG8 located_in ISO (PMID:20835237) UniProt PMID:20835237 NCBI chrNW_004624771:15,898,172...16,116,013
Ensembl chrNW_004624771:15,896,661...16,115,375
JBrowse link
G Sgca sarcoglycan alpha located_in ISO (PMID:19531352) MGI PMID:19531352 NCBI chrNW_004624795:6,152,317...6,162,190
Ensembl chrNW_004624795:6,152,323...6,161,359
JBrowse link
G Sh3kbp1 SH3 domain containing kinase binding protein 1 located_in ISO (PMID:23793062) MGI PMID:23793062 NCBI chrNW_004624829:4,329,959...4,714,329
Ensembl chrNW_004624829:4,329,824...4,714,298
JBrowse link
G Shroom2 shroom family member 2 located_in ISO (PMID:17666436) MGI PMID:17666436 NCBI chrNW_004624834:7,329,651...7,504,960 JBrowse link
G Skap1 src kinase associated phosphoprotein 1 located_in ISO (PMID:23793062) MGI PMID:23793062 NCBI chrNW_004624795:4,726,715...4,960,167
Ensembl chrNW_004624795:4,727,149...4,960,082
JBrowse link
G Slc2a1 solute carrier family 2 member 1 ISO RGD PMID:17090404 RGD:1624247 NCBI chrNW_004624892:2,110,310...2,148,023
Ensembl chrNW_004624892:2,117,561...2,148,037
JBrowse link
G Slc2a2 solute carrier family 2 member 2 located_in ISO (PMID:11287626), (PMID:17928203) MGI PMID:11287626 PMID:17928203 NCBI chrNW_004624730:49,026,603...49,056,363
Ensembl chrNW_004624730:49,025,766...49,056,284
JBrowse link
G Slc5a1 solute carrier family 5 member 1 ISO RGD PMID:17090404 RGD:1624247 NCBI chrNW_004624747:8,368,446...8,542,573
Ensembl chrNW_004624747:8,452,616...8,540,421
JBrowse link
G Specc1l sperm antigen with calponin homology and coiled-coil domains 1 like located_in ISO (PMID:26787558) MGI PMID:26787558 NCBI chrNW_004624747:9,687,369...9,837,344
Ensembl chrNW_004624747:9,705,081...9,837,535
JBrowse link
G Src SRC proto-oncogene, non-receptor tyrosine kinase located_in ISO (PMID:22294297) UniProt PMID:22294297 NCBI chrNW_004624842:2,212,561...2,260,514
Ensembl chrNW_004624842:2,211,020...2,230,132
JBrowse link
G Stx2 syntaxin 2 located_in ISO (PMID:11702001) MGI PMID:11702001 NCBI chrNW_004624747:27,247,947...27,272,698
Ensembl chrNW_004624747:27,249,608...27,272,728
JBrowse link
G Stx3 syntaxin 3 located_in ISO (PMID:15576373) UniProt PMID:15576373 NCBI chrNW_004624864:1,054,130...1,091,071
Ensembl chrNW_004624864:1,054,284...1,090,398
JBrowse link
G Sv2a synaptic vesicle glycoprotein 2A located_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004624772:17,684,061...17,698,728
Ensembl chrNW_004624772:17,681,299...17,696,884
JBrowse link
G Tec tec protein tyrosine kinase located_in ISO (PMID:23793062) MGI PMID:23793062 NCBI chrNW_004624761:18,695,168...18,824,045
Ensembl chrNW_004624761:18,695,177...18,822,078
JBrowse link
G Tek TEK receptor tyrosine kinase located_in ISO (PMID:18425120) UniProt PMID:18425120 NCBI chrNW_004624736:31,345,774...31,473,727 JBrowse link
G Tenm2 teneurin transmembrane protein 2 located_in ISO (PMID:21724987) UniProt PMID:21724987 NCBI chrNW_004624733:21,732,997...22,921,889
Ensembl chrNW_004624733:21,732,787...22,627,526
JBrowse link
G Themis thymocyte selection associated located_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004624753:2,214,779...2,292,936 JBrowse link
G Tiam1 TIAM Rac1 associated GEF 1 located_in ISO (PMID:20332120) UniProt PMID:20332120 NCBI chrNW_004624745:19,563,166...19,941,511
Ensembl chrNW_004624745:19,561,195...19,760,095
JBrowse link
G Tjp1 tight junction protein 1 located_in ISO PMID:25486565
(PMID:18423437), (PMID:20089884), (PMID:20473291), (PMID:22512338), (PMID:23824537), (PMID:24339795), (PMID:25486565), (PMID:26609154)
(PMID:10873669)
ARUK-UCL
MGI
UniProt
PMID:10873669 PMID:18423437 PMID:20089884 PMID:20473291 PMID:22512338 More... RGD:14995318 NCBI chrNW_004624768:2,826,848...3,034,195
Ensembl chrNW_004624768:2,828,324...3,034,302
JBrowse link
G Tjp2 tight junction protein 2 located_in ISO (PMID:25486565), (PMID:26609154) MGI PMID:25486565 PMID:26609154 NCBI chrNW_004624736:3,833,402...4,009,385
Ensembl chrNW_004624736:3,834,548...3,878,828
JBrowse link
G Tjp3 tight junction protein 3 located_in ISO PMID:25486565
(PMID:25486565)
ARUK-UCL PMID:25486565 RGD:14995318 NCBI chrNW_004624828:6,374,678...6,398,483
Ensembl chrNW_004624828:6,383,767...6,398,359
JBrowse link
G Tmem47 transmembrane protein 47 located_in IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004624762:21,100,254...21,129,793
Ensembl chrNW_004624762:21,100,133...21,129,895
JBrowse link
G Trpc4 transient receptor potential cation channel subfamily C member 4 located_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004624920:641,931...903,229
Ensembl chrNW_004624920:641,917...903,171
JBrowse link
G Twf1 twinfilin actin binding protein 1 located_in ISO (PMID:12807912) BHF-UCL PMID:12807912 NCBI chrNW_004624816:8,765,937...8,780,301
Ensembl chrNW_004624816:8,765,922...8,778,396
JBrowse link
G Vangl2 VANGL planar cell polarity protein 2 located_in ISO (PMID:15195140), (PMID:17433286), (PMID:20534871), (PMID:25605782) MGI PMID:15195140 PMID:17433286 PMID:20534871 PMID:25605782 NCBI chrNW_004624794:841,302...867,717
Ensembl chrNW_004624794:841,247...867,708
JBrowse link
G Vav1 vav guanine nucleotide exchange factor 1 located_in ISO (PMID:23793062) MGI PMID:23793062 NCBI chrNW_004624828:3,838,464...3,896,698
Ensembl chrNW_004624828:3,838,706...3,897,080
JBrowse link
G Vcl vinculin located_in IEA UniProt GO_REF:0000117 NCBI chrNW_004624754:7,484,759...7,590,108
Ensembl chrNW_004624754:7,484,773...7,590,108
JBrowse link
G Was WASP actin nucleation promoting factor located_in ISO (PMID:23793062) MGI PMID:23793062 NCBI chrNW_004624893:453,793...493,696
Ensembl chrNW_004624893:487,396...493,482
JBrowse link
G Wasf2 WASP family member 2 located_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004624764:11,292,677...11,392,202
Ensembl chrNW_004624764:11,292,272...11,383,386
JBrowse link
G Wdr1 WD repeat domain 1 located_in ISO (PMID:25792565) UniProt PMID:25792565 NCBI chrNW_004624755:21,090,599...21,124,107
Ensembl chrNW_004624755:21,090,717...21,123,259
JBrowse link
G Xirp2 xin actin binding repeat containing 2 located_in ISO (PMID:37294664) UniProt PMID:37294664 NCBI chrNW_004624787:4,912,941...4,998,889
Ensembl chrNW_004624787:4,912,862...5,002,551
JBrowse link
G Yap1 Yes1 associated transcriptional regulator located_in ISO (PMID:29400695) UniProt PMID:29400695 NCBI chrNW_004624878:621,214...776,363 JBrowse link
G Zacn zinc activated ion channel located_in ISO (PMID:8575755) MGI PMID:8575755 NCBI chrNW_004624801:5,986,882...5,990,078
Ensembl chrNW_004624801:5,986,879...5,991,003
JBrowse link
adherens junction term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Abi2 abl interactor 2 is_active_in
located_in
ISO (PMID:15572692) UniProt
MGI
PMID:15572692 NCBI chrNW_004624765:12,971,867...13,091,446
Ensembl chrNW_004624765:12,998,315...13,091,370
JBrowse link
G Actb actin beta located_in ISO (PMID:22855531) ARUK-UCL PMID:22855531 NCBI chrNW_004624740:28,087,051...28,090,359
Ensembl chrNW_004624740:28,087,736...28,090,512
JBrowse link
G Add1 adducin 1 located_in IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004624755:24,854,742...24,927,912
Ensembl chrNW_004624755:24,854,742...24,928,006
JBrowse link
G Afdn afadin, adherens junction formation factor located_in ISO
IEA
RGD
TreeGrafter
PMID:9334353 GO_REF:0000118 RGD:1299529 NCBI chrNW_004624785:11,549,805...11,698,029
Ensembl chrNW_004624785:11,551,687...11,697,921
JBrowse link
G Ahi1 Abelson helper integration site 1 located_in ISO (PMID:18633336) UniProt PMID:18633336 NCBI chrNW_004624886:2,189,753...2,403,174
Ensembl chrNW_004624886:2,189,655...2,397,364
JBrowse link
G Ajap1 adherens junctions associated protein 1 located_in IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004624818:6,214,846...6,318,347
Ensembl chrNW_004624818:6,214,907...6,318,333
JBrowse link
G Ajuba ajuba LIM protein located_in IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004624820:9,551,664...9,562,773
Ensembl chrNW_004624820:9,552,287...9,563,472
JBrowse link
G Apc APC regulator of WNT signaling pathway located_in ISO (PMID:16611247) UniProt PMID:16611247 NCBI chrNW_004624743:30,517,034...30,635,740
Ensembl chrNW_004624743:30,546,323...30,635,737
JBrowse link
G Arvcf ARVCF delta catenin family member located_in IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004624747:590,293...643,797
Ensembl chrNW_004624747:591,891...610,988
JBrowse link
G Bmpr2 bone morphogenetic protein receptor type 2 located_in ISO (PMID:25468996) BHF-UCL PMID:25468996 NCBI chrNW_004624765:13,849,689...13,950,839
Ensembl chrNW_004624765:13,857,062...13,947,683
JBrowse link
G Ccdc85a coiled-coil domain containing 85A located_in IEA UniProt GO_REF:0000044 NCBI chrNW_004624833:5,229,333...5,407,443
Ensembl chrNW_004624833:5,229,208...5,407,417
JBrowse link
G Ccdc85b coiled-coil domain containing 85B located_in IEA Ensembl
UniProt
GO_REF:0000044 GO_REF:0000107 NCBI chrNW_004624767:20,525,728...20,527,337
Ensembl chrNW_004624767:20,525,942...20,526,550
JBrowse link
G Ccdc85c coiled-coil domain containing 85C located_in IEA UniProt GO_REF:0000044 NCBI chrNW_004624734:4,310,662...4,366,209
Ensembl chrNW_004624734:4,310,607...4,366,209
JBrowse link
G Cd99l2 CD99 molecule like 2 located_in ISO (PMID:17344467) MGI PMID:17344467 NCBI chrNW_004624923:1,143,884...1,219,746
Ensembl chrNW_004624923:1,143,682...1,219,791
JBrowse link
G Cdc42ep4 CDC42 effector protein 4 located_in ISO (PMID:25468996) BHF-UCL PMID:25468996 NCBI chrNW_004624801:3,372,778...3,394,855 JBrowse link
G Cdca3 cell division cycle associated 3 located_in ISO (PMID:25468996) BHF-UCL PMID:25468996 NCBI chrNW_004624860:3,516,244...3,519,107
Ensembl chrNW_004624860:3,515,411...3,518,828
JBrowse link
G Cdh1 cadherin 1 located_in IEA UniProt
TreeGrafter
GO_REF:0000044 GO_REF:0000118 NCBI chrNW_004624746:17,480,472...17,557,722
Ensembl chrNW_004624746:17,483,469...17,557,581
JBrowse link
G Cdh10 cadherin 10 located_in IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004624873:4,278,264...4,480,609
Ensembl chrNW_004624873:4,304,398...4,480,680
JBrowse link
G Cdh11 cadherin 11 located_in IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004624746:21,345,304...21,501,542
Ensembl chrNW_004624746:21,345,310...21,503,822
JBrowse link
G Cdh13 cadherin 13 located_in IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004624746:3,696,608...4,759,693
Ensembl chrNW_004624746:3,698,196...4,759,442
JBrowse link
G Cdh15 cadherin 15 located_in IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004624746:603,723...617,616
Ensembl chrNW_004624746:605,012...617,582
JBrowse link
G Cdh16 cadherin 16 located_in IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004624746:19,590,590...19,600,101
Ensembl chrNW_004624746:19,590,445...19,602,672
JBrowse link
G Cdh17 cadherin 17 located_in IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004624763:1,543,341...1,621,970
Ensembl chrNW_004624763:1,543,048...1,621,978
JBrowse link
G Cdh19 cadherin 19 located_in IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004624792:12,633,803...12,752,267
Ensembl chrNW_004624792:12,635,240...12,752,439
JBrowse link
G Cdh2 cadherin 2 located_in ISO
IEA
RGD
TreeGrafter
UniProt
Ensembl
PMID:8834786 PMID:12533412 GO_REF:0000044 GO_REF:0000107 GO_REF:0000118 RGD:1626295 RGD:2291902 NCBI chrNW_004624770:4,333,643...4,540,817
Ensembl chrNW_004624770:4,334,202...4,545,470
JBrowse link
G Cdh20 cadherin 20 located_in IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004624792:6,903,439...7,158,708
Ensembl chrNW_004624792:6,902,931...7,159,514
JBrowse link
G Cdh22 cadherin 22 located_in IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004624790:8,369,972...8,437,595
Ensembl chrNW_004624790:8,369,964...8,438,683
JBrowse link
G Cdh24 cadherin 24 located_in IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004624820:9,484,779...9,494,891
Ensembl chrNW_004624820:9,485,919...9,494,990
JBrowse link
G Cdh26 cadherin 26 located_in IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004624741:26,243,545...26,255,170 JBrowse link
G Cdh3 cadherin 3 located_in IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004624746:17,616,296...17,659,021
Ensembl chrNW_004624746:17,616,940...17,658,548
JBrowse link
G Cdh4 cadherin 4 located_in IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004624741:27,331,436...27,858,474
Ensembl chrNW_004624741:27,331,496...27,855,390
JBrowse link
G Cdh5 cadherin 5 located_in IEA TreeGrafter
UniProt
GO_REF:0000044 GO_REF:0000118 NCBI chrNW_004624746:20,028,952...20,068,029
Ensembl chrNW_004624746:20,033,008...20,057,595
JBrowse link
G Cdh6 cadherin 6 located_in IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004624759:23,160,049...23,305,922
Ensembl chrNW_004624759:23,166,122...23,305,898
JBrowse link
G Cdh7 cadherin 7 located_in IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004624792:11,836,034...11,963,545
Ensembl chrNW_004624792:11,849,046...11,958,461
JBrowse link
G Cdh8 cadherin 8 located_in IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004624746:24,348,163...24,733,583
Ensembl chrNW_004624746:24,348,586...24,735,902
JBrowse link
G Cdh9 cadherin 9 located_in IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004624759:26,826,388...26,963,243
Ensembl chrNW_004624759:26,868,228...26,962,775
JBrowse link
G Crb1 crumbs cell polarity complex component 1 located_in ISO (PMID:15914641)
(PMID:15316081)
UniProt
MGI
PMID:15316081 PMID:15914641 NCBI chrNW_004624798:2,861,481...2,999,387
Ensembl chrNW_004624798:2,861,520...2,999,697
JBrowse link
G Ctnna1 catenin alpha 1 located_in ISO
IEA
RGD
TreeGrafter
UniProt
PMID:8834786 GO_REF:0000044 GO_REF:0000118 RGD:2291902 NCBI chrNW_004624743:31,512,481...31,700,340 JBrowse link
G Ctnna2 catenin alpha 2 located_in IEA UniProt
TreeGrafter
GO_REF:0000044 GO_REF:0000118 NCBI chrNW_004624749:22,332,750...23,546,165
Ensembl chrNW_004624749:22,333,710...23,412,593
JBrowse link
G Ctnna3 catenin alpha 3 located_in IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004624754:285,469...2,182,218
Ensembl chrNW_004624754:285,857...2,034,582
JBrowse link
G Ctnnb1 catenin beta 1 located_in ISO
IEA
MMO:0000683 RGD
Ensembl
UniProt
PMID:8834786 PMID:12533412 PMID:12960056 GO_REF:0000044 GO_REF:0000107 GO_REF:0000117 RGD:150530287 RGD:1626295 RGD:2291902 NCBI chrNW_004624730:77,876,361...77,887,228
Ensembl chrNW_004624730:77,875,257...77,887,234
JBrowse link
G Ctnnd1 catenin delta 1 located_in
part_of
IEA
ISO
(PMID:20123964) TreeGrafter
BHF-UCL
PMID:20123964 GO_REF:0000118 NCBI chrNW_004624864:2,953,357...3,000,355
Ensembl chrNW_004624864:2,951,556...3,006,529
JBrowse link
G Ctnnd2 catenin delta 2 located_in IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004624751:8,160,520...9,049,871
Ensembl chrNW_004624751:8,161,442...9,049,685
JBrowse link
G Cxadr CXADR Ig-like cell adhesion molecule located_in IEA UniProt GO_REF:0000044 NCBI chrNW_004624745:5,900,933...5,954,584
Ensembl chrNW_004624745:5,900,886...5,958,765
JBrowse link
G Cyth3 cytohesin 3 located_in ISO (PMID:20080746) UniProt PMID:20080746 NCBI chrNW_004624740:31,071,169...31,191,318
Ensembl chrNW_004624740:31,071,193...31,191,264
JBrowse link
G Dag1 dystroglycan 1 ISO RGD PMID:9117347 RGD:2314898 NCBI chrNW_004624730:3,417,356...3,488,300
Ensembl chrNW_004624730:3,417,347...3,488,879
JBrowse link
G Ddx6 DEAD-box helicase 6 ISO RGD PMID:24141902 RGD:10755411 NCBI chrNW_004624784:14,142,051...14,178,845
Ensembl chrNW_004624784:14,142,051...14,178,868
JBrowse link
G Dlg5 discs large MAGUK scaffold protein 5 located_in ISO (PMID:12657639), (PMID:17765678) MGI PMID:12657639 PMID:17765678 NCBI chrNW_004624754:11,033,649...11,155,271
Ensembl chrNW_004624754:11,036,716...11,155,256
JBrowse link
G Dll1 delta like canonical Notch ligand 1 located_in ISO (PMID:15908431), (PMID:24715457) UniProt PMID:15908431 PMID:24715457 NCBI chrNW_004624850:6,135,214...6,142,975
Ensembl chrNW_004624850:6,134,908...6,143,404
JBrowse link
G Dsc2 desmocollin 2 located_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004624770:1,748,561...1,778,566
Ensembl chrNW_004624770:1,748,276...1,781,117
JBrowse link
G Dsp desmoplakin NOT
located_in
ISO (PMID:15479741) RGD
UniProt
PMID:2463257 PMID:15479741 RGD:8693712 NCBI chrNW_004624756:18,036,103...18,083,379
Ensembl chrNW_004624756:18,035,892...18,083,336
JBrowse link
G Efna5 ephrin A5 located_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004624743:25,336,851...25,611,698
Ensembl chrNW_004624743:25,341,132...25,611,564
JBrowse link
G Epb41l5 erythrocyte membrane protein band 4.1 like 5 located_in IEA UniProt GO_REF:0000044 NCBI chrNW_004624732:24,908,711...25,088,246
Ensembl chrNW_004624732:24,908,723...25,088,244
JBrowse link
G Epha5 EPH receptor A5 located_in ISO (PMID:23242526) MGI PMID:23242526 NCBI chrNW_004624761:3,693,462...4,050,426
Ensembl chrNW_004624761:3,693,540...4,048,953
JBrowse link
G Erbin erbb2 interacting protein located_in IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004624815:3,765,261...3,901,309
Ensembl chrNW_004624815:3,768,207...3,852,815
JBrowse link
G Fat2 FAT atypical cadherin 2 located_in ISO (PMID:17900869) UniProt PMID:17900869 NCBI chrNW_004624733:37,427,330...37,520,756
Ensembl chrNW_004624733:37,433,349...37,520,756
JBrowse link
G Fer FER tyrosine kinase ISO MMO:0000683 RGD PMID:12700184 RGD:2291909 NCBI chrNW_004624743:26,663,440...27,097,771
Ensembl chrNW_004624743:26,694,465...27,091,250
JBrowse link
G Fermt2 FERM domain containing kindlin 2 located_in ISO (PMID:28799653) ARUK-UCL PMID:28799653 NCBI chrNW_004624731:16,168,179...16,247,747
Ensembl chrNW_004624731:16,168,207...16,246,778
JBrowse link
G Flot1 flotillin 1 located_in ISO (PMID:24046456) UniProt PMID:24046456 NCBI chrNW_004624754:24,992,961...25,000,463
Ensembl chrNW_004624754:24,992,929...25,003,759
JBrowse link
G Flot2 flotillin 2 located_in ISO (PMID:24046456) UniProt PMID:24046456 NCBI chrNW_004624786:1,449,001...1,465,208
Ensembl chrNW_004624786:1,450,234...1,465,102
JBrowse link
G Frmd4a FERM domain containing 4A located_in IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004624805:1,072,327...1,593,563
Ensembl chrNW_004624805:1,073,132...1,590,661
JBrowse link
G Frmd4b FERM domain containing 4B located_in IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004624773:3,763,706...3,961,465
Ensembl chrNW_004624773:3,763,222...3,961,536
JBrowse link
G Frmd5 FERM domain containing 5 located_in ISO (PMID:22846708) UniProt PMID:22846708 NCBI chrNW_004624804:10,906,085...11,240,249
Ensembl chrNW_004624804:10,906,958...11,239,995
JBrowse link
G Frs2 fibroblast growth factor receptor substrate 2 located_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004624750:28,224,289...28,359,473 JBrowse link
G Itga6 integrin subunit alpha 6 ISO RGD PMID:16608848 RGD:1600017 NCBI chrNW_004624787:9,821,802...9,903,851
Ensembl chrNW_004624787:9,821,769...9,904,679
JBrowse link
G Itgb1 integrin subunit beta 1 ISO apical ectoplasmic specialization RGD PMID:18579774 RGD:2325293 NCBI chrNW_004624805:8,748,848...8,800,259
Ensembl chrNW_004624805:8,765,949...8,802,149
JBrowse link
G Jag1 jagged canonical Notch ligand 1 located_in ISO (PMID:24715457) UniProt PMID:24715457 NCBI chrNW_004624741:11,647,723...11,683,137
Ensembl chrNW_004624741:11,647,463...11,683,488
JBrowse link
G Jcad junctional cadherin 5 associated located_in IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004624805:2,819,299...2,901,394
Ensembl chrNW_004624805:2,819,751...2,902,430
JBrowse link
G Jup junction plakoglobin located_in ISO
IEA
RGD
UniProt
PMID:8834786 GO_REF:0000044 GO_REF:0000117 RGD:2291902 NCBI chrNW_004624795:1,954,733...1,972,080
Ensembl chrNW_004624795:1,954,290...1,975,018
JBrowse link
G Keap1 kelch like ECH associated protein 1 ISO RGD PMID:14506708 RGD:2302250 NCBI chrNW_004624828:2,580,812...2,595,023
Ensembl chrNW_004624828:2,580,861...2,595,275
JBrowse link
G Klhl24 kelch like family member 24 located_in ISO (PMID:27889062) UniProt PMID:27889062 NCBI chrNW_004624730:72,803,070...72,843,627
Ensembl chrNW_004624730:72,807,780...72,844,190
JBrowse link
G Lama3 laminin subunit alpha 3 ISO RGD PMID:16608848 RGD:1600017 NCBI chrNW_004624770:8,237,085...8,482,770 JBrowse link
G Ldb3 LIM domain binding 3 located_in IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004624841:426,300...471,855
Ensembl chrNW_004624841:426,330...471,682
JBrowse link
G Limd1 LIM domain containing 1 located_in IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004624730:75,176,978...75,218,606
Ensembl chrNW_004624730:75,176,717...75,219,314
JBrowse link
G Lmo7 LIM domain 7 ISO RGD PMID:15140894 RGD:1303994 NCBI chrNW_004624751:24,636,636...24,855,515
Ensembl chrNW_004624751:24,637,354...24,855,450
JBrowse link
G LOC101704569 cadherin-related family member 3 located_in IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004624888:2,079,908...2,172,323 JBrowse link
G LOC101707560 cadherin-18 located_in IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004624751:15,823,761...15,890,514 JBrowse link
G LOC101707839 cadherin-18 located_in IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004624873:9,828...916,299
Ensembl chrNW_004624873:9,591...270,088
JBrowse link
G LOC101709621 cadherin-12 located_in IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004624873:1,805,489...1,840,935 JBrowse link
G LOC101709720 partitioning defective 3 homolog located_in IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004624836:4,529,688...4,540,193 JBrowse link
G LOC101719988 endothelial cell-selective adhesion molecule located_in IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004624927:769,043...777,455
Ensembl chrNW_004624927:769,550...777,201
JBrowse link
G LOC101722104 endothelial cell-selective adhesion molecule-like located_in IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004624927:800,534...806,972 JBrowse link
G LOC106007555 cadherin-12-like located_in IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004624873:1,937,532...2,906,567 JBrowse link
G LOC106009480 protein Shroom2-like located_in IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004624753:12,736,730...12,738,210 JBrowse link
G LOC110347625 cadherin-13-like located_in IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004625243:5,834...11,310 JBrowse link
G Lrrc1 leucine rich repeat containing 1 located_in IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004624850:1,105,844...1,232,595
Ensembl chrNW_004624850:1,105,926...1,234,504
JBrowse link
G Lrrc7 leucine rich repeat containing 7 located_in IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004624742:25,849,355...26,384,417
Ensembl chrNW_004624742:25,863,434...26,243,376
JBrowse link
G Lyn LYN proto-oncogene, Src family tyrosine kinase ISO RGD PMID:1709169 RGD:8693602 NCBI chrNW_004624886:4,029,318...4,168,797
Ensembl chrNW_004624886:4,027,178...4,168,902
JBrowse link
G Magi1 membrane associated guanylate kinase, WW and PDZ domain containing 1 located_in ISO (PMID:15908431) UniProt PMID:15908431 NCBI chrNW_004624888:46,089...686,823
Ensembl chrNW_004624888:46,214...687,291
JBrowse link
G Mpp3 MAGUK p55 scaffold protein 3 located_in ISO (PMID:23893895) UniProt PMID:23893895 NCBI chrNW_004624795:968,940...987,762
Ensembl chrNW_004624795:968,961...987,253
JBrowse link
G Mpp4 MAGUK p55 scaffold protein 4 located_in ISO (PMID:15914641) UniProt PMID:15914641 NCBI chrNW_004624899:175,920...205,398 JBrowse link
G Mpp7 MAGUK p55 scaffold protein 7 located_in IEA UniProt GO_REF:0000044 NCBI chrNW_004624805:6,430,817...6,636,865
Ensembl chrNW_004624805:6,429,918...6,577,479
JBrowse link
G Mtss1 MTSS I-BAR domain containing 1 located_in ISO (PMID:21406566) MGI PMID:21406566 NCBI chrNW_004624735:30,512,474...30,659,727
Ensembl chrNW_004624735:30,512,464...30,659,718
JBrowse link
G Myh9 myosin heavy chain 9 located_in ISO (PMID:15292239) MGI PMID:15292239 NCBI chrNW_004624752:11,327,881...11,414,037
Ensembl chrNW_004624752:11,327,877...11,413,669
JBrowse link
G Myo1e myosin IE located_in ISO (PMID:19005011) UniProt PMID:19005011 NCBI chrNW_004624781:12,682,614...12,866,990
Ensembl chrNW_004624781:12,682,514...12,871,099
JBrowse link
G Ndrg1 N-myc downstream regulated 1 located_in ISO (PMID:12432451) UniProt PMID:12432451 NCBI chrNW_004624735:22,734,365...22,782,247
Ensembl chrNW_004624735:22,734,228...22,782,347
JBrowse link
G Nectin1 nectin cell adhesion molecule 1 located_in IEA Ensembl
UniProt
TreeGrafter
GO_REF:0000044 GO_REF:0000107 GO_REF:0000118 NCBI chrNW_004624784:14,997,533...15,058,971
Ensembl chrNW_004624784:14,997,424...15,059,761
JBrowse link
G Nectin3 nectin cell adhesion molecule 3 located_in IEA TreeGrafter
UniProt
GO_REF:0000044 GO_REF:0000118 NCBI chrNW_004624731:37,425,966...37,567,938
Ensembl chrNW_004624731:37,433,809...37,568,677
JBrowse link
G Nectin4 nectin cell adhesion molecule 4 located_in IEA TreeGrafter
UniProt
GO_REF:0000044 GO_REF:0000118 NCBI chrNW_004624794:281,769...299,240
Ensembl chrNW_004624794:281,675...299,324
JBrowse link
G Nf2 NF2, moesin-ezrin-radixin like (MERLIN) tumor suppressor located_in ISO (PMID:12695331) MGI PMID:12695331 NCBI chrNW_004624747:5,923,827...6,011,276
Ensembl chrNW_004624747:5,923,834...6,011,939
JBrowse link
G Niban2 niban apoptosis regulator 2 located_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004624760:7,951,943...7,996,260
Ensembl chrNW_004624760:7,951,934...7,996,256
JBrowse link
G Notch1 notch receptor 1 located_in ISO (PMID:24715457) UniProt PMID:24715457 NCBI chrNW_004624760:1,636,331...1,676,398
Ensembl chrNW_004624760:1,634,702...1,676,531
JBrowse link
G Oxtr oxytocin receptor ISO RGD PMID:19003903 RGD:2303961 NCBI chrNW_004624731:3,367,645...3,384,815
Ensembl chrNW_004624731:3,370,701...3,385,640
JBrowse link
G Pals1 protein associated with LIN7 1, MAGUK p55 family member located_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004624734:33,659,625...33,758,680
Ensembl chrNW_004624734:33,658,975...33,721,548
JBrowse link
G Pard3 par-3 family cell polarity regulator located_in IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004624805:7,204,915...7,810,050
Ensembl chrNW_004624805:7,205,092...7,808,542
JBrowse link
G Pard3b par-3 family cell polarity regulator beta located_in IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004624765:10,543,734...11,627,811
Ensembl chrNW_004624765:10,548,067...11,214,095
JBrowse link
G Pdlim1 PDZ and LIM domain 1 located_in IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004624737:6,485,607...6,530,511
Ensembl chrNW_004624737:6,485,607...6,530,526
JBrowse link
G Pdlim2 PDZ and LIM domain 2 located_in IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004624758:18,085,818...18,098,621 JBrowse link
G Pdlim3 PDZ and LIM domain 3 located_in IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004624769:16,341,297...16,374,106
Ensembl chrNW_004624769:16,340,494...16,374,208
JBrowse link
G Pdlim4 PDZ and LIM domain 4 located_in IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004624733:39,826,435...39,840,280
Ensembl chrNW_004624733:39,825,025...39,840,361
JBrowse link
G Pdlim5 PDZ and LIM domain 5 located_in IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004624757:22,332,479...22,597,312
Ensembl chrNW_004624757:22,332,505...22,597,586
JBrowse link
G Pdlim7 PDZ and LIM domain 7 located_in IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004624733:12,591,883...12,607,992
Ensembl chrNW_004624733:12,591,883...12,607,992
JBrowse link
G Pgm5 phosphoglucomutase 5 located_in IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004624736:4,599,808...4,804,709
Ensembl chrNW_004624736:4,599,809...4,804,985
JBrowse link
G Pkp1 plakophilin 1 located_in IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004624807:9,374,206...9,419,075
Ensembl chrNW_004624807:9,372,099...9,419,067
JBrowse link
G Pkp2 plakophilin 2 located_in ISO
IEA
RGD
TreeGrafter
PMID:16406610 GO_REF:0000118 RGD:1581654 NCBI chrNW_004624778:3,261,446...3,344,204
Ensembl chrNW_004624778:3,261,390...3,342,850
JBrowse link
G Pkp3 plakophilin 3 located_in IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004624766:22,015,928...22,024,313
Ensembl chrNW_004624766:22,015,928...22,022,840
JBrowse link
G Pkp4 plakophilin 4 located_in IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004624732:6,970,728...7,208,842 JBrowse link
G Plpp3 phospholipid phosphatase 3 located_in ISO (PMID:20123964) BHF-UCL PMID:20123964 NCBI chrNW_004624862:3,550,498...3,627,061
Ensembl chrNW_004624862:3,550,968...3,627,058
JBrowse link
G Pof1b POF1B actin binding protein located_in IEA Ensembl
TreeGrafter
GO_REF:0000107 GO_REF:0000118 NCBI chrNW_004624852:3,022,251...3,136,807
Ensembl chrNW_004624852:3,022,251...3,134,418
JBrowse link
G Ppp1ca protein phosphatase 1 catalytic subunit alpha located_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004624767:19,120,683...19,123,935
Ensembl chrNW_004624767:19,119,883...19,123,934
JBrowse link
G Ptprm protein tyrosine phosphatase receptor type M located_in ISS UniProt GO_REF:0000024 NCBI chrNW_004624770:16,900,925...17,507,775
Ensembl chrNW_004624770:16,990,056...17,508,167
JBrowse link
G Rdx radixin ISO RGD PMID:2500445 RGD:8693627 NCBI chrNW_004624784:5,198,433...5,304,953
Ensembl chrNW_004624784:5,221,045...5,271,045
JBrowse link
G Rnd1 Rho family GTPase 1 located_in ISO (PMID:9531558) UniProt PMID:9531558 NCBI chrNW_004624816:3,305,907...3,312,618
Ensembl chrNW_004624816:3,305,677...3,313,578
JBrowse link
G Scrib scribble planar cell polarity protein located_in IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004624735:12,997,358...13,018,765
Ensembl chrNW_004624735:12,997,408...13,018,533
JBrowse link
G Sh3bp1 SH3 domain binding protein 1 located_in ISO (PMID:22891260) UniProt PMID:22891260 NCBI chrNW_004624752:10,253,384...10,264,483
Ensembl chrNW_004624752:10,253,719...10,264,483
JBrowse link
G Shroom1 shroom family member 1 located_in IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004624733:39,259,645...39,279,919
Ensembl chrNW_004624733:39,276,285...39,279,522
JBrowse link
G Shroom2 shroom family member 2 located_in IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004624834:7,329,651...7,504,960 JBrowse link
G Shroom3 shroom family member 3 located_in IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004624757:14,187,911...14,524,999
Ensembl chrNW_004624757:14,187,756...14,394,834
JBrowse link
G Shroom4 shroom family member 4 located_in IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004624893:2,373,847...2,660,122
Ensembl chrNW_004624893:2,373,815...2,660,199
JBrowse link
G Smad7 SMAD family member 7 located_in ISO (PMID:18593713) BHF-UCL PMID:18593713 NCBI chrNW_004624778:12,415,364...12,444,882
Ensembl chrNW_004624778:12,415,282...12,444,835
JBrowse link
G Snap23 synaptosome associated protein 23 located_in ISO (PMID:25468996) BHF-UCL PMID:25468996 NCBI chrNW_004624804:9,609,777...9,643,670
Ensembl chrNW_004624804:9,610,308...9,641,933
JBrowse link
G Sorbs1 sorbin and SH3 domain containing 1 located_in ISO (PMID:10085297) UniProt PMID:10085297 NCBI chrNW_004624737:6,646,837...6,875,408
Ensembl chrNW_004624737:6,647,651...6,786,335
JBrowse link
G Ssx2ip SSX family member 2 interacting protein located_in ISO
IEA
RGD
UniProt
PMID:12446711 GO_REF:0000044 RGD:629551 NCBI chrNW_004624742:12,822,693...12,862,831
Ensembl chrNW_004624742:12,822,716...12,864,508
JBrowse link
G Tax1bp3 Tax1 binding protein 3 located_in IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004624786:6,318,879...6,323,835
Ensembl chrNW_004624786:6,318,879...6,323,816
JBrowse link
G Tgfb1i1 transforming growth factor beta 1 induced transcript 1 located_in IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004624782:14,471,427...14,476,792
Ensembl chrNW_004624782:14,471,415...14,476,914
JBrowse link
G Tgm1 transglutaminase 1 located_in ISO (PMID:10567386) MGI PMID:10567386 NCBI chrNW_004624820:8,239,087...8,252,716
Ensembl chrNW_004624820:8,239,904...8,252,541
JBrowse link
G Tjp1 tight junction protein 1 located_in ISO (PMID:11731229), (PMID:12203721), (PMID:15728677), (PMID:17666436) MGI PMID:11731229 PMID:12203721 PMID:15728677 PMID:17666436 NCBI chrNW_004624768:2,826,848...3,034,195
Ensembl chrNW_004624768:2,828,324...3,034,302
JBrowse link
G Tln1 talin 1 located_in ISO (PMID:26923917) ARUK-UCL PMID:26923917 NCBI chrNW_004624868:5,061,108...5,095,433
Ensembl chrNW_004624868:5,061,290...5,095,661
JBrowse link
G Tmem47 transmembrane protein 47 located_in IEA UniProt GO_REF:0000044 NCBI chrNW_004624762:21,100,254...21,129,793
Ensembl chrNW_004624762:21,100,133...21,129,895
JBrowse link
G Tnks1bp1 tankyrase 1 binding protein 1 located_in ISO (PMID:11854288) BHF-UCL PMID:11854288 NCBI chrNW_004624864:3,262,973...3,280,099
Ensembl chrNW_004624864:3,266,082...3,280,246
JBrowse link
G Trpv4 transient receptor potential cation channel subfamily V member 4 located_in ISO (PMID:20413591) UniProt PMID:20413591 NCBI chrNW_004624747:10,675,625...10,685,351 JBrowse link
G Tspan33 tetraspanin 33 located_in IEA UniProt GO_REF:0000044 NCBI chrNW_004624783:7,058,827...7,083,345
Ensembl chrNW_004624783:7,058,827...7,083,367
JBrowse link
G Vcl vinculin located_in IEA UniProt GO_REF:0000044 NCBI chrNW_004624754:7,484,759...7,590,108
Ensembl chrNW_004624754:7,484,773...7,590,108
JBrowse link
G Vegfa vascular endothelial growth factor A located_in ISO (PMID:26598555) ARUK-UCL PMID:26598555 NCBI chrNW_004624754:15,929,414...15,943,637 JBrowse link
G Vezt vezatin, adherens junctions transmembrane protein located_in IEA UniProt GO_REF:0000044 NCBI chrNW_004624750:11,808,192...11,869,019
Ensembl chrNW_004624750:11,808,192...11,868,985
JBrowse link
G Wnk3 WNK lysine deficient protein kinase 3 located_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004624909:1,886,372...2,107,582
Ensembl chrNW_004624909:1,891,486...2,081,735
JBrowse link
G Wtip WT1 interacting protein located_in IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004624794:8,721,261...8,746,923
Ensembl chrNW_004624794:8,722,110...8,745,987
JBrowse link
G Xirp1 xin actin binding repeat containing 1 located_in ISO (PMID:12203715) MGI PMID:12203715 NCBI chrNW_004624731:1,779,004...1,788,668
Ensembl chrNW_004624731:1,782,128...1,787,647
JBrowse link
G Zyx zyxin located_in ISO (PMID:8940160) MGI PMID:8940160 NCBI chrNW_004624800:11,380,787...11,389,418
Ensembl chrNW_004624800:11,381,178...11,389,271
JBrowse link
apical ectoplasmic specialization term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Actr3 actin related protein 3 ISO RGD PMID:23546604 RGD:11530027 NCBI chrNW_004624732:31,360,804...31,427,885
Ensembl chrNW_004624732:31,361,147...31,427,811
JBrowse link
G Atp2a2 ATPase sarcoplasmic/endoplasmic reticulum Ca2+ transporting 2 ISO RGD PMID:28486663 RGD:13782081 NCBI chrNW_004624747:21,509,360...21,567,424
Ensembl chrNW_004624747:21,509,366...21,568,098
JBrowse link
G Gsn gelsolin ISO RGD PMID:11861757 RGD:1303950 NCBI chrNW_004624760:13,943,680...14,004,660
Ensembl chrNW_004624760:13,943,888...13,969,905
JBrowse link
apical junction complex term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Actb actin beta located_in ISO (PMID:22855531) ARUK-UCL PMID:22855531 NCBI chrNW_004624740:28,087,051...28,090,359
Ensembl chrNW_004624740:28,087,736...28,090,512
JBrowse link
G Actg1 actin gamma 1 located_in ISO (PMID:22855531) ARUK-UCL PMID:22855531 NCBI chrNW_004624801:10,496,876...10,499,737
Ensembl chrNW_004624801:10,496,718...10,499,637
JBrowse link
G Afdn afadin, adherens junction formation factor located_in ISO (PMID:22512338) MGI PMID:22512338 NCBI chrNW_004624785:11,549,805...11,698,029
Ensembl chrNW_004624785:11,551,687...11,697,921
JBrowse link
G Ajm1 apical junction component 1 homolog located_in IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004624760:1,002,860...1,008,527
Ensembl chrNW_004624760:1,001,590...1,007,530
JBrowse link
G Ccdc85c coiled-coil domain containing 85C located_in IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004624734:4,310,662...4,366,209
Ensembl chrNW_004624734:4,310,607...4,366,209
JBrowse link
G Ccdc88c coiled-coil domain containing 88C is_active_in ISO (PMID:33929515) MGI PMID:33929515 NCBI chrNW_004624734:11,215,274...11,336,535
Ensembl chrNW_004624734:11,215,357...11,336,413
JBrowse link
G Cdh1 cadherin 1 located_in IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004624746:17,480,472...17,557,722
Ensembl chrNW_004624746:17,483,469...17,557,581
JBrowse link
G Cgn cingulin located_in ISO (PMID:15292197) MGI PMID:15292197 NCBI chrNW_004624772:19,222,475...19,249,418 JBrowse link
G Cgnl1 cingulin like 1 located_in ISO (PMID:15292197) MGI PMID:15292197 NCBI chrNW_004624781:14,215,252...14,357,705
Ensembl chrNW_004624781:14,215,723...14,357,705
JBrowse link
G Cldn19 claudin 19 located_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004624892:1,974,608...1,982,042
Ensembl chrNW_004624892:1,974,534...1,982,114
JBrowse link
G Cldn3 claudin 3 located_in ISO (PMID:27593915) ARUK-UCL PMID:27593915 NCBI chrNW_004624740:14,065,172...14,066,432
Ensembl chrNW_004624740:14,065,478...14,066,137
JBrowse link
G Crb1 crumbs cell polarity complex component 1 located_in ISO (PMID:15316081) MGI PMID:15316081 NCBI chrNW_004624798:2,861,481...2,999,387
Ensembl chrNW_004624798:2,861,520...2,999,697
JBrowse link
G Ctnnb1 catenin beta 1 located_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004624730:77,876,361...77,887,228
Ensembl chrNW_004624730:77,875,257...77,887,234
JBrowse link
G Fbf1 Fas binding factor 1 located_in ISO (PMID:18838552) UniProt PMID:18838552 NCBI chrNW_004624801:5,791,900...5,818,623
Ensembl chrNW_004624801:5,792,938...5,818,713
JBrowse link
G Frmd6 FERM domain containing 6 located_in ISO (PMID:21685893), (PMID:22512338) MGI PMID:21685893 PMID:22512338 NCBI chrNW_004624731:17,284,024...17,380,406
Ensembl chrNW_004624731:17,282,088...17,359,754
JBrowse link
G LOC101709720 partitioning defective 3 homolog located_in IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004624836:4,529,688...4,540,193 JBrowse link
G LOC101712173 poliovirus receptor homolog located_in IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004624907:1,582,636...1,596,528 JBrowse link
G LOC106009480 protein Shroom2-like located_in IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004624753:12,736,730...12,738,210 JBrowse link
G Nectin1 nectin cell adhesion molecule 1 located_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004624784:14,997,533...15,058,971
Ensembl chrNW_004624784:14,997,424...15,059,761
JBrowse link
G Nectin2 nectin cell adhesion molecule 2 located_in IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004624907:1,713,786...1,739,158
Ensembl chrNW_004624907:1,713,443...1,740,627
JBrowse link
G Nectin3 nectin cell adhesion molecule 3 located_in IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004624731:37,425,966...37,567,938
Ensembl chrNW_004624731:37,433,809...37,568,677
JBrowse link
G Nherf4 NHERF family PDZ scaffold protein 4 located_in ISO (PMID:11950846), (PMID:19088451) UniProt PMID:11950846 PMID:19088451 NCBI chrNW_004624784:14,564,134...14,568,587
Ensembl chrNW_004624784:14,564,060...14,570,025
JBrowse link
G Pard3 par-3 family cell polarity regulator located_in IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004624805:7,204,915...7,810,050
Ensembl chrNW_004624805:7,205,092...7,808,542
JBrowse link
G Pard3b par-3 family cell polarity regulator beta located_in IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004624765:10,543,734...11,627,811
Ensembl chrNW_004624765:10,548,067...11,214,095
JBrowse link
G Pkn2 protein kinase N2 located_in ISO (PMID:20974804) UniProt PMID:20974804 NCBI chrNW_004624742:8,740,102...8,865,483
Ensembl chrNW_004624742:8,742,473...8,865,281
JBrowse link
G Rhoa ras homolog family member A located_in ISO (PMID:20974804) UniProt PMID:20974804 NCBI chrNW_004624730:3,316,122...3,361,820 JBrowse link
G Sapcd2 suppressor APC domain containing 2 located_in ISO (PMID:26766442) UniProt PMID:26766442 NCBI chrNW_004624760:843,746...848,104
Ensembl chrNW_004624760:843,760...847,327
JBrowse link
G Shroom1 shroom family member 1 located_in IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004624733:39,259,645...39,279,919
Ensembl chrNW_004624733:39,276,285...39,279,522
JBrowse link
G Shroom2 shroom family member 2 located_in IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004624834:7,329,651...7,504,960 JBrowse link
G Shroom3 shroom family member 3 located_in IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004624757:14,187,911...14,524,999
Ensembl chrNW_004624757:14,187,756...14,394,834
JBrowse link
G Shroom4 shroom family member 4 located_in IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004624893:2,373,847...2,660,122
Ensembl chrNW_004624893:2,373,815...2,660,199
JBrowse link
G Tjp1 tight junction protein 1 located_in ISO (PMID:16427635) MGI PMID:16427635 NCBI chrNW_004624768:2,826,848...3,034,195
Ensembl chrNW_004624768:2,828,324...3,034,302
JBrowse link
basal ectoplasmic specialization term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Actr3 actin related protein 3 ISO RGD PMID:23546604 RGD:11530027 NCBI chrNW_004624732:31,360,804...31,427,885
Ensembl chrNW_004624732:31,361,147...31,427,811
JBrowse link
G Gsn gelsolin ISO RGD PMID:11861757 RGD:1303950 NCBI chrNW_004624760:13,943,680...14,004,660
Ensembl chrNW_004624760:13,943,888...13,969,905
JBrowse link
G Kiaa1210 KIAA1210 ortholog located_in ISO (PMID:28203736) UniProt PMID:28203736 NCBI chrNW_004624895:3,082,686...3,128,686 JBrowse link
bicellular tight junction term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Actn1 actinin alpha 1 located_in ISS AgBase GO_REF:0000024 NCBI chrNW_004624734:32,097,364...32,190,162
Ensembl chrNW_004624734:32,097,671...32,192,729
JBrowse link
G Adcyap1r1 ADCYAP receptor type I ISO RGD PMID:16626868 RGD:2315976 NCBI chrNW_004624783:271,179...323,785
Ensembl chrNW_004624783:279,745...323,772
JBrowse link
G Amot angiomotin located_in IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004624803:2,405,037...2,491,715
Ensembl chrNW_004624803:2,422,274...2,488,097
JBrowse link
G Amotl1 angiomotin like 1 located_in IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004624735:39,393,567...39,544,266
Ensembl chrNW_004624735:39,435,338...39,539,826
JBrowse link
G Amotl2 angiomotin like 2 located_in IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004624730:10,695,648...10,713,188
Ensembl chrNW_004624730:10,695,138...10,713,808
JBrowse link
G Ank3 ankyrin 3 located_in ISO (PMID:14757759) BHF-UCL PMID:14757759 NCBI chrNW_004624791:3,299,287...3,633,631 JBrowse link
G Aoc1 amine oxidase copper containing 1 ISO RGD PMID:18855986 RGD:2312870 NCBI chrNW_004624800:5,739,076...5,749,567
Ensembl chrNW_004624800:5,739,034...5,749,608
JBrowse link
G Apc APC regulator of WNT signaling pathway located_in ISO (PMID:18502210) UniProt PMID:18502210 NCBI chrNW_004624743:30,517,034...30,635,740
Ensembl chrNW_004624743:30,546,323...30,635,737
JBrowse link
G Arhgef2 Rho/Rac guanine nucleotide exchange factor 2 located_in IEA UniProt GO_REF:0000043 GO_REF:0000044 NCBI chrNW_004624885:1,314,885...1,362,730
Ensembl chrNW_004624885:1,311,512...1,362,730
JBrowse link
G Atp7b ATPase copper transporting beta ISO RGD PMID:18395099 RGD:2292671 NCBI chrNW_004624748:2,112,574...2,183,994
Ensembl chrNW_004624748:2,113,094...2,205,856
JBrowse link
G C1qtnf5 C1q and TNF related 5 located_in ISO (PMID:17122142) MGI PMID:17122142 NCBI chrNW_004624784:14,707,453...14,709,609
Ensembl chrNW_004624784:14,707,453...14,708,954
JBrowse link
G Ccdc85c coiled-coil domain containing 85C located_in IEA UniProt GO_REF:0000043 GO_REF:0000044 NCBI chrNW_004624734:4,310,662...4,366,209
Ensembl chrNW_004624734:4,310,607...4,366,209
JBrowse link
G Ccnd1 cyclin D1 located_in ISO (PMID:21411630) MGI PMID:21411630 NCBI chrNW_004624767:17,470,310...17,483,082
Ensembl chrNW_004624767:17,469,622...17,483,191
JBrowse link
G Cdh5 cadherin 5 located_in IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004624746:20,028,952...20,068,029
Ensembl chrNW_004624746:20,033,008...20,057,595
JBrowse link
G Cdk4 cyclin dependent kinase 4 located_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004624802:10,191,679...10,194,585
Ensembl chrNW_004624802:10,191,014...10,194,275
JBrowse link
G Cgn cingulin located_in IEA UniProt
TreeGrafter
GO_REF:0000043 GO_REF:0000044 GO_REF:0000118 NCBI chrNW_004624772:19,222,475...19,249,418 JBrowse link
G Cgnl1 cingulin like 1 located_in IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004624781:14,215,252...14,357,705
Ensembl chrNW_004624781:14,215,723...14,357,705
JBrowse link
G Cldn1 claudin 1 located_in ISO
IEA
RGD
UniProt
InterPro
Ensembl
PMID:11159859 PMID:19929946 GO_REF:0000002 GO_REF:0000043 GO_REF:0000044 GO_REF:0000104 GO_REF:0000107 RGD:2325127 RGD:68224 NCBI chrNW_004624730:66,885,674...66,902,345
Ensembl chrNW_004624730:66,885,319...66,903,079
JBrowse link
G Cldn10 claudin 10 located_in IEA UniProt
InterPro
Ensembl
GO_REF:0000002 GO_REF:0000043 GO_REF:0000044 GO_REF:0000104 GO_REF:0000107 NCBI chrNW_004624879:2,178,896...2,298,905
Ensembl chrNW_004624879:2,179,142...2,298,924
JBrowse link
G Cldn11 claudin 11 located_in IEA InterPro
UniProt
GO_REF:0000002 GO_REF:0000043 GO_REF:0000044 GO_REF:0000104 NCBI chrNW_004624730:48,458,593...48,473,463
Ensembl chrNW_004624730:48,458,512...48,474,734
JBrowse link
G Cldn12 claudin 12 located_in IEA UniProt GO_REF:0000043 GO_REF:0000044 NCBI chrNW_004624809:2,845,411...2,854,367 JBrowse link
G Cldn14 claudin 14 located_in IEA UniProt
InterPro
GO_REF:0000002 GO_REF:0000043 GO_REF:0000044 GO_REF:0000104 NCBI chrNW_004624745:27,058,441...27,074,288
Ensembl chrNW_004624745:27,058,911...27,074,282
JBrowse link
G Cldn15 claudin 15 located_in IEA UniProt
InterPro
GO_REF:0000002 GO_REF:0000043 GO_REF:0000044 GO_REF:0000104 NCBI chrNW_004624740:16,056,823...16,063,250
Ensembl chrNW_004624740:16,057,712...16,063,264
JBrowse link
G Cldn16 claudin 16 located_in ISO
IEA
RGD
InterPro
UniProt
PMID:15496416 GO_REF:0000002 GO_REF:0000043 GO_REF:0000044 RGD:1599617 NCBI chrNW_004624730:66,741,687...66,768,589
Ensembl chrNW_004624730:66,741,550...66,768,921
JBrowse link
G Cldn17 claudin 17 located_in IEA UniProt
InterPro
GO_REF:0000002 GO_REF:0000043 GO_REF:0000044 GO_REF:0000104 NCBI chrNW_004624745:18,229,509...18,230,650
Ensembl chrNW_004624745:18,229,813...18,230,487
JBrowse link
G Cldn18 claudin 18 located_in IEA UniProt
InterPro
GO_REF:0000002 GO_REF:0000043 GO_REF:0000044 NCBI chrNW_004624730:14,500,379...14,522,047
Ensembl chrNW_004624730:14,489,585...14,522,042
JBrowse link
G Cldn19 claudin 19 located_in IEA UniProt
InterPro
Ensembl
GO_REF:0000002 GO_REF:0000043 GO_REF:0000044 GO_REF:0000104 GO_REF:0000107 NCBI chrNW_004624892:1,974,608...1,982,042
Ensembl chrNW_004624892:1,974,534...1,982,114
JBrowse link
G Cldn2 claudin 2 located_in IEA UniProt
Ensembl
InterPro
GO_REF:0000002 GO_REF:0000043 GO_REF:0000044 GO_REF:0000104 GO_REF:0000107 NCBI chrNW_004624803:9,839,916...9,849,891
Ensembl chrNW_004624803:9,839,911...9,846,367
JBrowse link
G Cldn20 claudin 20 located_in IEA UniProt
InterPro
GO_REF:0000002 GO_REF:0000043 GO_REF:0000044 GO_REF:0000104 NCBI chrNW_004624785:3,063,852...3,065,040
Ensembl chrNW_004624785:3,063,991...3,064,650
JBrowse link
G Cldn23 claudin 23 located_in IEA UniProt
InterPro
GO_REF:0000002 GO_REF:0000043 GO_REF:0000044 NCBI chrNW_004624839:4,719,208...4,721,734
Ensembl chrNW_004624839:4,719,985...4,720,869
JBrowse link
G Cldn25 claudin 25 located_in IEA UniProt
InterPro
GO_REF:0000002 GO_REF:0000043 GO_REF:0000044 NCBI chrNW_004624784:9,255,348...9,272,047
Ensembl chrNW_004624784:9,259,743...9,271,806
JBrowse link
G Cldn3 claudin 3 located_in ISO
IEA
RGD
UniProt
InterPro
PMID:11159882 GO_REF:0000002 GO_REF:0000043 GO_REF:0000044 GO_REF:0000104 RGD:727233 NCBI chrNW_004624740:14,065,172...14,066,432
Ensembl chrNW_004624740:14,065,478...14,066,137
JBrowse link
G Cldn34 claudin 34 located_in IEA UniProt
InterPro
GO_REF:0000002 GO_REF:0000043 GO_REF:0000044 NCBI chrNW_004624782:12,756,563...12,790,973 JBrowse link
G Cldn4 claudin 4 located_in IEA UniProt
InterPro
GO_REF:0000002 GO_REF:0000043 GO_REF:0000044 GO_REF:0000104 NCBI chrNW_004624740:14,033,848...14,035,854 JBrowse link
G Cldn5 claudin 5 located_in IEA UniProt
InterPro
Ensembl
GO_REF:0000002 GO_REF:0000043 GO_REF:0000044 GO_REF:0000104 GO_REF:0000107 NCBI chrNW_004624747:164,113...166,502
Ensembl chrNW_004624747:164,761...165,417
JBrowse link
G Cldn6 claudin 6 located_in IEA UniProt
Ensembl
InterPro
GO_REF:0000002 GO_REF:0000043 GO_REF:0000044 GO_REF:0000104 GO_REF:0000107 NCBI chrNW_004624824:760,251...764,101
Ensembl chrNW_004624824:760,798...763,142
JBrowse link
G Cldn7 claudin 7 located_in IEA UniProt
Ensembl
InterPro
GO_REF:0000002 GO_REF:0000043 GO_REF:0000044 GO_REF:0000104 GO_REF:0000107 NCBI chrNW_004624786:9,873,555...9,875,743
Ensembl chrNW_004624786:9,873,555...9,875,817
JBrowse link
G Cldn8 claudin 8 located_in IEA UniProt
InterPro
GO_REF:0000002 GO_REF:0000043 GO_REF:0000044 GO_REF:0000104 NCBI chrNW_004624745:18,281,038...18,283,442
Ensembl chrNW_004624745:18,282,293...18,282,970
JBrowse link
G Cldn9 claudin 9 located_in IEA UniProt
InterPro
Ensembl
GO_REF:0000002 GO_REF:0000043 GO_REF:0000044 GO_REF:0000104 GO_REF:0000107 NCBI chrNW_004624824:757,962...759,818
Ensembl chrNW_004624824:758,662...759,315
JBrowse link
G Clmp CXADR like membrane protein located_in ISO (PMID:22155368) UniProt PMID:22155368 NCBI chrNW_004624880:1,965,264...2,063,241
Ensembl chrNW_004624880:1,965,476...2,059,420
JBrowse link
G Ctnnb1 catenin beta 1 located_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004624730:77,876,361...77,887,228
Ensembl chrNW_004624730:77,875,257...77,887,234
JBrowse link
G Ctnnd1 catenin delta 1 located_in ISO (PMID:17130295) MGI PMID:17130295 NCBI chrNW_004624864:2,953,357...3,000,355
Ensembl chrNW_004624864:2,951,556...3,006,529
JBrowse link
G Cxadr CXADR Ig-like cell adhesion molecule located_in
part_of
ISO
IEA
(PMID:22003382) RGD
TreeGrafter
UniProt
CACAO
PMID:12808125 PMID:22003382 GO_REF:0000043 GO_REF:0000044 GO_REF:0000118 RGD:1299248 NCBI chrNW_004624745:5,900,933...5,954,584
Ensembl chrNW_004624745:5,900,886...5,958,765
JBrowse link
G Cyth1 cytohesin 1 located_in ISO (PMID:20080746) MGI PMID:20080746 NCBI chrNW_004624801:8,064,205...8,165,672
Ensembl chrNW_004624801:8,064,012...8,165,701
JBrowse link
G Cyth2 cytohesin 2 located_in ISO (PMID:20080746) UniProt PMID:20080746 NCBI chrNW_004624832:5,335,168...5,342,574 JBrowse link
G Cyth3 cytohesin 3 located_in ISO (PMID:20080746) UniProt PMID:20080746 NCBI chrNW_004624740:31,071,169...31,191,318
Ensembl chrNW_004624740:31,071,193...31,191,264
JBrowse link
G Dlg1 discs large MAGUK scaffold protein 1 located_in ISO (PMID:17332497) BHF-UCL PMID:17332497 NCBI chrNW_004624730:62,001,547...62,223,098
Ensembl chrNW_004624730:62,002,280...62,223,319
JBrowse link
G Dlg3 discs large MAGUK scaffold protein 3 located_in ISO (PMID:21920314) MGI PMID:21920314 NCBI chrNW_004624903:409,721...473,422
Ensembl chrNW_004624903:409,709...473,659
JBrowse link
G Ect2 epithelial cell transforming 2 located_in ISO (PMID:15254234) UniProt PMID:15254234 NCBI chrNW_004624730:50,773,465...50,841,427
Ensembl chrNW_004624730:50,773,566...50,840,510
JBrowse link
G Epcam epithelial cell adhesion molecule located_in IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004624738:28,755,039...28,770,160
Ensembl chrNW_004624738:28,754,602...28,770,758
JBrowse link
G F11r F11 receptor located_in IEA UniProt
TreeGrafter
GO_REF:0000043 GO_REF:0000044 GO_REF:0000118 NCBI chrNW_004624794:346,281...367,132
Ensembl chrNW_004624794:346,387...367,428
JBrowse link
G Frmd4a FERM domain containing 4A located_in IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004624805:1,072,327...1,593,563
Ensembl chrNW_004624805:1,073,132...1,590,661
JBrowse link
G Frmd4b FERM domain containing 4B located_in IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004624773:3,763,706...3,961,465
Ensembl chrNW_004624773:3,763,222...3,961,536
JBrowse link
G Fzd5 frizzled class receptor 5 located_in ISO (PMID:23610556) MGI PMID:23610556 NCBI chrNW_004624765:8,222,193...8,228,530
Ensembl chrNW_004624765:8,222,237...8,228,050
JBrowse link
G Hecw2 HECT, C2 and WW domain containing E3 ubiquitin protein ligase 2 located_in IEA UniProt GO_REF:0000043 GO_REF:0000044 NCBI chrNW_004624854:475,098...831,202
Ensembl chrNW_004624854:618,262...824,178
JBrowse link
G Igsf5 immunoglobulin superfamily member 5 located_in ISO (PMID:12773569) MGI PMID:12773569 NCBI chrNW_004624745:24,280,360...24,330,509 JBrowse link
G Jam3 junctional adhesion molecule 3 located_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004624812:8,644,002...8,707,257
Ensembl chrNW_004624812:8,643,921...8,707,351
JBrowse link
G Jaml junction adhesion molecule like located_in ISO (PMID:15800062) UniProt PMID:15800062 NCBI chrNW_004624784:13,601,368...13,625,881 JBrowse link
G Lin7a lin-7 homolog A, crumbs cell polarity complex component located_in IEA UniProt GO_REF:0000043 GO_REF:0000044 GO_REF:0000104 NCBI chrNW_004624837:104,948...258,085 JBrowse link
G Lin7b lin-7 homolog B, crumbs cell polarity complex component located_in IEA UniProt GO_REF:0000043 GO_REF:0000044 GO_REF:0000104 NCBI chrNW_004624832:4,965,537...4,968,574
Ensembl chrNW_004624832:4,965,537...4,968,516
JBrowse link
G Lin7c lin-7 homolog C, crumbs cell polarity complex component located_in IEA UniProt GO_REF:0000043 GO_REF:0000044 GO_REF:0000104 NCBI chrNW_004624766:17,159,205...17,167,119
Ensembl chrNW_004624766:17,161,179...17,167,073
JBrowse link
G LOC101696515 putative claudin-24 located_in IEA UniProt
InterPro
GO_REF:0000002 GO_REF:0000043 GO_REF:0000044 GO_REF:0000104 NCBI chrNW_004624769:14,058,484...14,059,642 JBrowse link
G LOC101715334 protein lin-7 homolog A-like located_in IEA UniProt GO_REF:0000043 GO_REF:0000044 GO_REF:0000104 NCBI chrNW_004624750:16,038,822...16,039,537 JBrowse link
G LOC101723451 uncharacterized LOC101723451 located_in IEA InterPro
UniProt
GO_REF:0000002 GO_REF:0000043 GO_REF:0000044 NCBI chrNW_004624754:5,017,848...5,023,780 JBrowse link
G LOC101726648 claudin-22 located_in IEA UniProt
InterPro
GO_REF:0000002 GO_REF:0000043 GO_REF:0000044 GO_REF:0000104 NCBI chrNW_004624769:14,056,807...14,057,469
Ensembl chrNW_004624769:14,056,807...14,057,469
JBrowse link
G LOC106010110 transcriptional coactivator YAP1-like located_in IEA UniProt GO_REF:0000043 GO_REF:0000044 NCBI chrNW_004624772:9,206,715...9,209,082 JBrowse link
G Lsr lipolysis stimulated lipoprotein receptor located_in IEA UniProt GO_REF:0000043 GO_REF:0000044 NCBI chrNW_004624794:8,271,642...8,286,816
Ensembl chrNW_004624794:8,271,159...8,285,967
JBrowse link
G Magi2 membrane associated guanylate kinase, WW and PDZ domain containing 2 located_in ISO (PMID:10760291) UniProt PMID:10760291 NCBI chrNW_004624739:27,132,533...28,430,765
Ensembl chrNW_004624739:27,134,993...28,430,686
JBrowse link
G Magi3 membrane associated guanylate kinase, WW and PDZ domain containing 3 located_in IEA UniProt GO_REF:0000043 GO_REF:0000044 NCBI chrNW_004624772:9,108,214...9,375,367
Ensembl chrNW_004624772:9,108,294...9,371,724
JBrowse link
G Marveld2 MARVEL domain containing 2 located_in IEA UniProt
TreeGrafter
Ensembl
GO_REF:0000043 GO_REF:0000044 GO_REF:0000107 GO_REF:0000118 NCBI chrNW_004624905:277,718...300,821
Ensembl chrNW_004624905:284,356...297,865
JBrowse link
G Marveld3 MARVEL domain containing 3 located_in ISO (PMID:20028514), (PMID:20164257)
(PMID:20164257)
MGI PMID:20028514 PMID:20164257 NCBI chrNW_004624746:13,898,857...13,914,032 JBrowse link
G Micall2 MICAL like 2 located_in ISO (PMID:16525024) MGI PMID:16525024 NCBI chrNW_004624740:26,928,330...26,947,671
Ensembl chrNW_004624740:26,928,449...26,946,957
JBrowse link
G Mpdz multiple PDZ domain crumbs cell polarity complex component located_in IEA UniProt
TreeGrafter
GO_REF:0000043 GO_REF:0000044 GO_REF:0000118 NCBI chrNW_004624736:17,392,132...17,555,612
Ensembl chrNW_004624736:17,397,405...17,533,674
JBrowse link
G Mpp7 MAGUK p55 scaffold protein 7 located_in IEA UniProt GO_REF:0000043 GO_REF:0000044 NCBI chrNW_004624805:6,430,817...6,636,865
Ensembl chrNW_004624805:6,429,918...6,577,479
JBrowse link
G Mtdh metadherin ISO RGD PMID:15383321 RGD:1359738 NCBI chrNW_004624763:4,905,261...4,967,014
Ensembl chrNW_004624763:4,905,044...4,967,014
JBrowse link
G Ocel1 occludin/ELL domain containing 1 located_in IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004624908:681,457...683,307 JBrowse link
G Ocln occludin located_in IEA UniProt
TreeGrafter
Ensembl
InterPro
GO_REF:0000002 GO_REF:0000043 GO_REF:0000044 GO_REF:0000104 GO_REF:0000107 GO_REF:0000118 NCBI chrNW_004624905:333,853...388,990
Ensembl chrNW_004624905:333,864...388,880
JBrowse link
G Pals1 protein associated with LIN7 1, MAGUK p55 family member located_in IEA UniProt GO_REF:0000043 GO_REF:0000044 NCBI chrNW_004624734:33,659,625...33,758,680
Ensembl chrNW_004624734:33,658,975...33,721,548
JBrowse link
G Pard3 par-3 family cell polarity regulator located_in ISO (PMID:10954424)
(PMID:14676191), (PMID:22006950)
UniProt PMID:10954424 PMID:14676191 PMID:22006950 NCBI chrNW_004624805:7,204,915...7,810,050
Ensembl chrNW_004624805:7,205,092...7,808,542
JBrowse link
G Pard6a par-6 family cell polarity regulator alpha located_in IEA UniProt
Ensembl
GO_REF:0000043 GO_REF:0000044 GO_REF:0000107 NCBI chrNW_004624746:18,686,916...18,688,739
Ensembl chrNW_004624746:18,686,921...18,688,703
JBrowse link
G Pard6b par-6 family cell polarity regulator beta located_in IEA UniProt
Ensembl
GO_REF:0000043 GO_REF:0000044 GO_REF:0000107 NCBI chrNW_004624790:4,939,753...4,960,432
Ensembl chrNW_004624790:4,939,592...4,960,531
JBrowse link
G Pard6g par-6 family cell polarity regulator gamma located_in IEA UniProt GO_REF:0000043 GO_REF:0000044 NCBI chrNW_004624806:95,478...182,374
Ensembl chrNW_004624806:95,448...182,925
JBrowse link
G Patj PATJ crumbs cell polarity complex component located_in IEA UniProt
TreeGrafter
GO_REF:0000043 GO_REF:0000044 GO_REF:0000118 NCBI chrNW_004624742:31,510,784...31,725,256
Ensembl chrNW_004624742:31,550,498...31,719,424
JBrowse link
G Pmp22 peripheral myelin protein 22 ISO RGD PMID:11717414 RGD:70581 NCBI chrNW_004624877:3,293,980...3,328,337
Ensembl chrNW_004624877:3,292,244...3,328,660
JBrowse link
G Pof1b POF1B actin binding protein located_in IEA Ensembl
TreeGrafter
GO_REF:0000107 GO_REF:0000118 NCBI chrNW_004624852:3,022,251...3,136,807
Ensembl chrNW_004624852:3,022,251...3,134,418
JBrowse link
G Popdc1 popeye domain cAMP effector 1 located_in IEA UniProt GO_REF:0000043 GO_REF:0000044 NCBI chrNW_004624952:326,812...360,790
Ensembl chrNW_004624952:323,475...360,805
JBrowse link
G Prkci protein kinase C iota located_in ISO RGD PMID:9763423 RGD:633671 NCBI chrNW_004624730:48,258,524...48,340,217 JBrowse link
G Prkcz protein kinase C zeta located_in ISO (PMID:15775979), (PMID:15950600) MGI PMID:15775979 PMID:15950600 NCBI chrNW_004624818:7,758,192...7,846,950
Ensembl chrNW_004624818:7,759,770...7,847,208
JBrowse link
G Rab13 RAB13, member RAS oncogene family located_in ISO (PMID:11025210)
(PMID:12058051), (PMID:8294494)
MGI
UniProt
PMID:8294494 PMID:11025210 PMID:12058051 NCBI chrNW_004624885:3,239,581...3,243,539
Ensembl chrNW_004624885:3,239,595...3,243,539
JBrowse link
G Rap2b RAP2B, member of RAS oncogene family located_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004624730:30,788,382...30,790,402
Ensembl chrNW_004624730:30,788,414...30,788,965
JBrowse link
G Rap2c RAP2C, member of RAS oncogene family located_in ISO (PMID:23885123) UniProt PMID:23885123 NCBI chrNW_004624797:11,882,443...11,899,940 JBrowse link
G Rapgef2 Rap guanine nucleotide exchange factor 2 located_in ISO (PMID:23885123) UniProt PMID:23885123 NCBI chrNW_004624848:3,968,845...4,184,740
Ensembl chrNW_004624848:3,968,362...4,182,885
JBrowse link
G Rigi RNA sensor RIG-I located_in ISO (PMID:19122199) UniProt PMID:19122199 NCBI chrNW_004624736:37,134,718...37,204,543
Ensembl chrNW_004624736:37,133,059...37,197,218
JBrowse link
G Sh3bp1 SH3 domain binding protein 1 located_in ISO (PMID:22891260) UniProt PMID:22891260 NCBI chrNW_004624752:10,253,384...10,264,483
Ensembl chrNW_004624752:10,253,719...10,264,483
JBrowse link
G Shroom2 shroom family member 2 located_in ISO (PMID:16684770) UniProt PMID:16684770 NCBI chrNW_004624834:7,329,651...7,504,960 JBrowse link
G Strn striatin located_in ISO (PMID:18502210) UniProt PMID:18502210 NCBI chrNW_004624738:18,474,603...18,585,109
Ensembl chrNW_004624738:18,476,522...18,585,160
JBrowse link
G Tgfbr1 transforming growth factor beta receptor 1 located_in IEA UniProt GO_REF:0000043 GO_REF:0000044 NCBI chrNW_004624825:1,773,158...1,899,120
Ensembl chrNW_004624825:1,839,178...1,899,156
JBrowse link
G Tjp1 tight junction protein 1 located_in ISO
IEA
RGD
TreeGrafter
UniProt
InterPro
PMID:17899156 GO_REF:0000002 GO_REF:0000043 GO_REF:0000044 GO_REF:0000118 RGD:2289800 NCBI chrNW_004624768:2,826,848...3,034,195
Ensembl chrNW_004624768:2,828,324...3,034,302
JBrowse link
G Tjp2 tight junction protein 2 located_in ISO
IEA
RGD
TreeGrafter
UniProt
InterPro
PMID:10559001 GO_REF:0000002 GO_REF:0000043 GO_REF:0000044 GO_REF:0000118 RGD:631940 NCBI chrNW_004624736:3,833,402...4,009,385
Ensembl chrNW_004624736:3,834,548...3,878,828
JBrowse link
G Tjp3 tight junction protein 3 located_in IEA InterPro
TreeGrafter
UniProt
GO_REF:0000002 GO_REF:0000043 GO_REF:0000044 GO_REF:0000118 NCBI chrNW_004624828:6,374,678...6,398,483
Ensembl chrNW_004624828:6,383,767...6,398,359
JBrowse link
G Ubn1 ubinuclein 1 located_in ISO (PMID:18823282) UniProt PMID:18823282 NCBI chrNW_004624824:2,693,270...2,720,305
Ensembl chrNW_004624824:2,693,403...2,720,305
JBrowse link
G Vapa VAMP associated protein A located_in IEA UniProt GO_REF:0000043 GO_REF:0000044 NCBI chrNW_004624770:18,411,921...18,447,004
Ensembl chrNW_004624770:18,411,789...18,447,009
JBrowse link
G Wnk3 WNK lysine deficient protein kinase 3 located_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004624909:1,886,372...2,107,582
Ensembl chrNW_004624909:1,891,486...2,081,735
JBrowse link
G Wnk4 WNK lysine deficient protein kinase 4 located_in ISO (PMID:11498583) UniProt PMID:11498583 NCBI chrNW_004624795:1,416,479...1,428,350
Ensembl chrNW_004624795:1,416,886...1,427,811
JBrowse link
G Wwox WW domain containing oxidoreductase located_in IEA UniProt GO_REF:0000043 GO_REF:0000044 NCBI chrNW_004624746:7,983,863...8,924,312
Ensembl chrNW_004624746:7,984,671...8,924,136
JBrowse link
G Wwtr1 WW domain containing transcription regulator 1 located_in IEA UniProt GO_REF:0000043 GO_REF:0000044 NCBI chrNW_004624730:26,813,716...26,967,615
Ensembl chrNW_004624730:26,813,624...26,967,691
JBrowse link
G Yap1 Yes1 associated transcriptional regulator located_in IEA UniProt GO_REF:0000043 GO_REF:0000044 NCBI chrNW_004624878:621,214...776,363 JBrowse link
cell-cell contact zone term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Afdn afadin, adherens junction formation factor located_in ISO (PMID:16882694) ARUK-UCL PMID:16882694 NCBI chrNW_004624785:11,549,805...11,698,029
Ensembl chrNW_004624785:11,551,687...11,697,921
JBrowse link
G Ahnak AHNAK nucleoprotein located_in ISO (PMID:21940993) UniProt PMID:21940993 NCBI chrNW_004624926:1,071,969...1,101,587 JBrowse link
G Ajap1 adherens junctions associated protein 1 located_in IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004624818:6,214,846...6,318,347
Ensembl chrNW_004624818:6,214,907...6,318,333
JBrowse link
G Baiap2l2 BAR/IMD domain containing adaptor protein 2 like 2 located_in ISO (PMID:21743456) UniProt PMID:21743456 NCBI chrNW_004624752:9,841,970...9,873,073
Ensembl chrNW_004624752:9,841,886...9,873,067
JBrowse link
G Bloc1s6 biogenesis of lysosomal organelles complex 1 subunit 6 is_active_in ISO (PMID:19116644) MGI PMID:19116644 NCBI chrNW_004624731:13,775,414...13,789,380
Ensembl chrNW_004624731:13,777,656...13,785,366
JBrowse link
G Cadm4 cell adhesion molecule 4 located_in IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004624907:1,152,063...1,168,587
Ensembl chrNW_004624907:1,152,645...1,168,589
JBrowse link
G Fgfrl1 fibroblast growth factor receptor like 1 located_in ISO (PMID:18061161) UniProt PMID:18061161 NCBI chrNW_004624755:26,134,957...26,145,746
Ensembl chrNW_004624755:26,135,505...26,144,325
JBrowse link
G Flcn folliculin located_in ISS UniProt GO_REF:0000024 NCBI chrNW_004624849:4,157,683...4,179,724 JBrowse link
G Flot1 flotillin 1 located_in ISO (PMID:23983584) UniProt PMID:23983584 NCBI chrNW_004624754:24,992,961...25,000,463
Ensembl chrNW_004624754:24,992,929...25,003,759
JBrowse link
G Flot2 flotillin 2 located_in ISO (PMID:23983584) UniProt PMID:23983584 NCBI chrNW_004624786:1,449,001...1,465,208
Ensembl chrNW_004624786:1,450,234...1,465,102
JBrowse link
G Gja1 gap junction protein alpha 1 located_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004624798:9,358,996...9,364,413
Ensembl chrNW_004624798:9,359,004...9,364,313
JBrowse link
G Jam2 junctional adhesion molecule 2 located_in ISO (PMID:12239159) ARUK-UCL PMID:12239159 NCBI chrNW_004624745:13,704,031...13,778,749
Ensembl chrNW_004624745:13,704,652...13,776,172
JBrowse link
G Jam3 junctional adhesion molecule 3 located_in IEA Ensembl
TreeGrafter
GO_REF:0000107 GO_REF:0000118 NCBI chrNW_004624812:8,644,002...8,707,257
Ensembl chrNW_004624812:8,643,921...8,707,351
JBrowse link
G Nectin1 nectin cell adhesion molecule 1 located_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004624784:14,997,533...15,058,971
Ensembl chrNW_004624784:14,997,424...15,059,761
JBrowse link
G Nectin2 nectin cell adhesion molecule 2 located_in ISO (PMID:23533177) MGI PMID:23533177 NCBI chrNW_004624907:1,713,786...1,739,158
Ensembl chrNW_004624907:1,713,443...1,740,627
JBrowse link
G Nectin3 nectin cell adhesion molecule 3 located_in ISO (PMID:23533177) MGI PMID:23533177 NCBI chrNW_004624731:37,425,966...37,567,938
Ensembl chrNW_004624731:37,433,809...37,568,677
JBrowse link
G Opalin oligodendrocytic myelin paranodal and inner loop protein located_in IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004624737:7,782,166...7,799,835
Ensembl chrNW_004624737:7,779,325...7,799,909
JBrowse link
G Pcdh9 protocadherin 9 located_in ISO (PMID:22982106) MGI PMID:22982106 NCBI chrNW_004624748:27,604,426...28,543,256
Ensembl chrNW_004624748:27,606,224...28,543,269
JBrowse link
G Pecam1 platelet and endothelial cell adhesion molecule 1 located_in ISO (PMID:20724702) MGI PMID:20724702 NCBI chrNW_004624870:33,293...122,536 JBrowse link
G Pkp4 plakophilin 4 located_in ISO (PMID:22965878) UniProt PMID:22965878 NCBI chrNW_004624732:6,970,728...7,208,842 JBrowse link
G Rap2b RAP2B, member of RAS oncogene family located_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004624730:30,788,382...30,790,402
Ensembl chrNW_004624730:30,788,414...30,788,965
JBrowse link
G Rap2c RAP2C, member of RAS oncogene family located_in ISO (PMID:23885123) UniProt PMID:23885123 NCBI chrNW_004624797:11,882,443...11,899,940 JBrowse link
G Scrib scribble planar cell polarity protein located_in ISO (PMID:22333836) MGI PMID:22333836 NCBI chrNW_004624735:12,997,358...13,018,765
Ensembl chrNW_004624735:12,997,408...13,018,533
JBrowse link
G Tiam1 TIAM Rac1 associated GEF 1 located_in ISO (PMID:20361982) UniProt PMID:20361982 NCBI chrNW_004624745:19,563,166...19,941,511
Ensembl chrNW_004624745:19,561,195...19,760,095
JBrowse link
G Tjp2 tight junction protein 2 located_in ISO (PMID:21679692) ARUK-UCL PMID:21679692 NCBI chrNW_004624736:3,833,402...4,009,385
Ensembl chrNW_004624736:3,834,548...3,878,828
JBrowse link
G Vcl vinculin located_in ISO (PMID:26923917) ARUK-UCL PMID:26923917 NCBI chrNW_004624754:7,484,759...7,590,108
Ensembl chrNW_004624754:7,484,773...7,590,108
JBrowse link
connexin complex term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Gja1 gap junction protein alpha 1 part_of ISO
IEA
RGD
TreeGrafter
InterPro
PMID:9851942 PMID:15048573 PMID:16731531 GO_REF:0000002 GO_REF:0000118 RGD:1580399 RGD:1582674 RGD:1598435 NCBI chrNW_004624798:9,358,996...9,364,413
Ensembl chrNW_004624798:9,359,004...9,364,313
JBrowse link
G Gja10 gap junction protein alpha 10 part_of IEA InterPro
TreeGrafter
GO_REF:0000002 GO_REF:0000118 NCBI chrNW_004624799:4,278,097...4,279,588 JBrowse link
G Gja3 gap junction protein alpha 3 part_of IEA InterPro
TreeGrafter
GO_REF:0000002 GO_REF:0000118 NCBI chrNW_004624776:17,562,050...17,585,308
Ensembl chrNW_004624776:17,579,913...17,581,121
JBrowse link
G Gja4 gap junction protein alpha 4 part_of ISO
IEA
RGD
TreeGrafter
InterPro
PMID:9851942 GO_REF:0000002 GO_REF:0000118 RGD:1598435 NCBI chrNW_004624764:17,842,566...17,845,011
Ensembl chrNW_004624764:17,836,180...17,845,011
JBrowse link
G Gja5 gap junction protein alpha 5 part_of ISO
IEA
RGD
TreeGrafter
Ensembl
InterPro
PMID:1328644 PMID:9851942 GO_REF:0000002 GO_REF:0000107 GO_REF:0000118 RGD:1598435 RGD:728713 NCBI chrNW_004624772:16,810,723...16,828,328
Ensembl chrNW_004624772:16,813,011...16,814,084
JBrowse link
G Gja8 gap junction protein alpha 8 part_of ISO
IEA
RGD
TreeGrafter
InterPro
Ensembl
PMID:16123426 GO_REF:0000002 GO_REF:0000107 GO_REF:0000118 RGD:1598965 NCBI chrNW_004624772:16,959,615...16,960,937
Ensembl chrNW_004624772:16,959,615...16,960,937
JBrowse link
G Gjb1 gap junction protein beta 1 part_of IEA InterPro
TreeGrafter
GO_REF:0000002 GO_REF:0000118 NCBI chrNW_004624903:1,511,347...1,519,265
Ensembl chrNW_004624903:1,517,324...1,519,265
JBrowse link
G Gjb2 gap junction protein beta 2 part_of IEA InterPro
TreeGrafter
GO_REF:0000002 GO_REF:0000118 NCBI chrNW_004624776:17,517,824...17,522,683
Ensembl chrNW_004624776:17,518,284...17,522,936
JBrowse link
G Gjb3 gap junction protein beta 3 part_of IEA InterPro
TreeGrafter
GO_REF:0000002 GO_REF:0000118 NCBI chrNW_004624764:17,829,214...17,833,509
Ensembl chrNW_004624764:17,829,467...17,833,465
JBrowse link
G Gjb4 gap junction protein beta 4 part_of IEA InterPro
TreeGrafter
GO_REF:0000002 GO_REF:0000118 NCBI chrNW_004624764:17,812,152...17,814,987
Ensembl chrNW_004624764:17,813,922...17,814,722
JBrowse link
G Gjb5 gap junction protein beta 5 part_of IEA InterPro
TreeGrafter
GO_REF:0000002 GO_REF:0000118 NCBI chrNW_004624764:17,807,943...17,811,404
Ensembl chrNW_004624764:17,808,161...17,811,372
JBrowse link
G Gjb6 gap junction protein beta 6 part_of IEA InterPro
TreeGrafter
GO_REF:0000002 GO_REF:0000118 NCBI chrNW_004624776:17,477,947...17,487,304
Ensembl chrNW_004624776:17,477,966...17,487,303
JBrowse link
G Gjb7 gap junction protein beta 7 part_of IEA InterPro
TreeGrafter
GO_REF:0000002 GO_REF:0000118 NCBI chrNW_004624799:7,053,954...7,067,571
Ensembl chrNW_004624799:7,057,990...7,065,205
JBrowse link
G Gjc1 gap junction protein gamma 1 part_of IEA TreeGrafter
InterPro
GO_REF:0000002 GO_REF:0000118 NCBI chrNW_004624795:443,234...466,222
Ensembl chrNW_004624795:461,691...464,454
JBrowse link
G Gjc2 gap junction protein gamma 2 part_of IEA InterPro
TreeGrafter
GO_REF:0000002 GO_REF:0000118 NCBI chrNW_004624937:898,876...905,247 JBrowse link
G Gjc3 gap junction protein gamma 3 part_of IEA TreeGrafter
InterPro
GO_REF:0000002 GO_REF:0000118 NCBI chrNW_004624740:17,068,237...17,092,297 JBrowse link
G Gjd2 gap junction protein delta 2 part_of IEA InterPro
TreeGrafter
GO_REF:0000002 GO_REF:0000118 NCBI chrNW_004624804:1,962,597...1,965,598
Ensembl chrNW_004624804:1,961,865...1,965,673
JBrowse link
G Gjd3 gap junction protein delta 3 part_of IEA InterPro
TreeGrafter
GO_REF:0000002 GO_REF:0000118 NCBI chrNW_004624795:2,930,425...2,933,411
Ensembl chrNW_004624795:2,930,925...2,931,767
JBrowse link
G Gjd4 gap junction protein delta 4 part_of IEA InterPro
TreeGrafter
GO_REF:0000002 GO_REF:0000118 NCBI chrNW_004624805:10,006,548...10,009,592
Ensembl chrNW_004624805:10,006,616...10,009,618
JBrowse link
desmosome term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G B4galt1 beta-1,4-galactosyltransferase 1 located_in ISO (PMID:3917437) UniProt PMID:3917437 NCBI chrNW_004624736:37,848,431...37,927,291
Ensembl chrNW_004624736:37,848,117...37,927,980
JBrowse link
G Cdh1 cadherin 1 located_in IEA UniProt GO_REF:0000044 NCBI chrNW_004624746:17,480,472...17,557,722
Ensembl chrNW_004624746:17,483,469...17,557,581
JBrowse link
G Cdh2 cadherin 2 located_in IEA Ensembl
UniProt
GO_REF:0000044 GO_REF:0000107 NCBI chrNW_004624770:4,333,643...4,540,817
Ensembl chrNW_004624770:4,334,202...4,545,470
JBrowse link
G Cdsn corneodesmosin located_in ISO (PMID:11279026), (PMID:26014679) MGI PMID:11279026 PMID:26014679 NCBI chrNW_004624754:24,796,308...24,800,324
Ensembl chrNW_004624754:24,796,341...24,799,913
JBrowse link
G Dsc1 desmocollin 1 located_in IEA UniProt
TreeGrafter
GO_REF:0000044 GO_REF:0000118 NCBI chrNW_004624770:1,709,920...1,743,005
Ensembl chrNW_004624770:1,710,170...1,740,454
JBrowse link
G Dsc2 desmocollin 2 located_in IEA UniProt
TreeGrafter
Ensembl
GO_REF:0000044 GO_REF:0000107 GO_REF:0000118 NCBI chrNW_004624770:1,748,561...1,778,566
Ensembl chrNW_004624770:1,748,276...1,781,117
JBrowse link
G Dsc3 desmocollin 3 located_in IEA UniProt
TreeGrafter
GO_REF:0000044 GO_REF:0000118 NCBI chrNW_004624770:1,799,731...1,846,379
Ensembl chrNW_004624770:1,803,296...1,843,687
JBrowse link
G Dsg1 desmoglein 1 located_in IEA UniProt
TreeGrafter
GO_REF:0000044 GO_REF:0000117 GO_REF:0000118 NCBI chrNW_004624770:1,514,978...1,551,437
Ensembl chrNW_004624770:1,517,027...1,542,322
JBrowse link
G Dsg2 desmoglein 2 located_in IEA UniProt
TreeGrafter
GO_REF:0000044 GO_REF:0000118 NCBI chrNW_004624770:1,315,021...1,363,472
Ensembl chrNW_004624770:1,313,916...1,364,153
JBrowse link
G Dsg3 desmoglein 3 located_in IEA UniProt
TreeGrafter
GO_REF:0000044 GO_REF:0000118 NCBI chrNW_004624770:1,384,847...1,416,833 JBrowse link
G Dsg4 desmoglein 4 located_in IEA UniProt
TreeGrafter
GO_REF:0000044 GO_REF:0000118 NCBI chrNW_004624770:1,456,988...1,491,069
Ensembl chrNW_004624770:1,457,016...1,495,009
JBrowse link
G Dsp desmoplakin located_in ISO
IEA
RGD
UniProt
PMID:16406610 GO_REF:0000044 RGD:1581654 NCBI chrNW_004624756:18,036,103...18,083,379
Ensembl chrNW_004624756:18,035,892...18,083,336
JBrowse link
G Jam3 junctional adhesion molecule 3 located_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004624812:8,644,002...8,707,257
Ensembl chrNW_004624812:8,643,921...8,707,351
JBrowse link
G Jup junction plakoglobin located_in ISO (PMID:21880664)
(PMID:10662781), (PMID:14673151), (PMID:15775979), (PMID:22515648), (PMID:9864371)
(PMID:1639850), (PMID:20859650), (PMID:2726765)
(PMID:18496566)
PMID:21617128
PMID:26858265
RGD
CACAO
MGI
ARUK-UCL
UniProt
PMID:1639850 PMID:2726765 PMID:9864371 PMID:10662781 PMID:14673151 More... RGD:11526329 RGD:1581654 RGD:6767286 NCBI chrNW_004624795:1,954,733...1,972,080
Ensembl chrNW_004624795:1,954,290...1,975,018
JBrowse link
G Kazn kazrin, periplakin interacting protein located_in ISO (PMID:15337775) MGI PMID:15337775 NCBI chrNW_004624764:414,993...1,486,004 JBrowse link
G Klhl24 kelch like family member 24 located_in ISO (PMID:27889062) UniProt PMID:27889062 NCBI chrNW_004624730:72,803,070...72,843,627
Ensembl chrNW_004624730:72,807,780...72,844,190
JBrowse link
G Krt80 keratin 80 NOT|located_in ISO (PMID:20843789) UniProt PMID:20843789 NCBI chrNW_004624816:176,804...197,612
Ensembl chrNW_004624816:177,066...197,698
JBrowse link
G Perp p53 apoptosis effector related to PMP22 located_in ISO (PMID:22515648) UniProt PMID:22515648 NCBI chrNW_004624753:15,772,104...15,786,238
Ensembl chrNW_004624753:15,772,083...15,786,794
JBrowse link
G Pkp1 plakophilin 1 located_in ISO (PMID:20613778), (PMID:23444369)
(PMID:18496566), (PMID:27033150), (PMID:27375112), (PMID:29678907)
UniProt PMID:18496566 PMID:20613778 PMID:23444369 PMID:27033150 PMID:27375112 More... NCBI chrNW_004624807:9,374,206...9,419,075
Ensembl chrNW_004624807:9,372,099...9,419,067
JBrowse link
G Pkp2 plakophilin 2 located_in ISO PMID:21617128
(PMID:22274697), (PMID:9864371)
(PMID:20613778), (PMID:20859650), (PMID:34368962)
UniProt
MGI
PMID:9864371 PMID:20613778 PMID:20859650 PMID:21617128 PMID:22274697 More... RGD:6767286 NCBI chrNW_004624778:3,261,446...3,344,204
Ensembl chrNW_004624778:3,261,390...3,342,850
JBrowse link
G Pkp3 plakophilin 3 located_in ISO (PMID:20613778), (PMID:20859650), (PMID:24124604), (PMID:25501895)
(PMID:14673151), (PMID:18079750), (PMID:27033150), (PMID:27375112), (PMID:29678907)
UniProt PMID:14673151 PMID:18079750 PMID:20613778 PMID:20859650 PMID:24124604 More... NCBI chrNW_004624766:22,015,928...22,024,313
Ensembl chrNW_004624766:22,015,928...22,022,840
JBrowse link
G Pkp4 plakophilin 4 located_in ISO (PMID:8937994) UniProt PMID:8937994 NCBI chrNW_004624732:6,970,728...7,208,842 JBrowse link
G Pnn pinin, desmosome associated protein located_in IEA UniProt GO_REF:0000044 NCBI chrNW_004624813:8,620,089...8,627,964
Ensembl chrNW_004624813:8,620,174...8,626,886
JBrowse link
G Pof1b POF1B actin binding protein located_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004624852:3,022,251...3,136,807
Ensembl chrNW_004624852:3,022,251...3,134,418
JBrowse link
G Tchp trichoplein keratin filament binding located_in ISO (PMID:21325031) MGI PMID:21325031 NCBI chrNW_004624747:10,587,587...10,603,396 JBrowse link
G Uba1 ubiquitin like modifier activating enzyme 1 located_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004624887:3,961,699...3,983,772
Ensembl chrNW_004624887:3,963,871...3,984,243
JBrowse link
fascia adherens term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Actn1 actinin alpha 1 located_in ISO (PMID:11732910) MGI PMID:11732910 NCBI chrNW_004624734:32,097,364...32,190,162
Ensembl chrNW_004624734:32,097,671...32,192,729
JBrowse link
G Cdh2 cadherin 2 located_in ISO
IEA
RGD
Ensembl
PMID:16515795 GO_REF:0000107 RGD:1582675 NCBI chrNW_004624770:4,333,643...4,540,817
Ensembl chrNW_004624770:4,334,202...4,545,470
JBrowse link
G Ctnna3 catenin alpha 3 located_in IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004624754:285,469...2,182,218
Ensembl chrNW_004624754:285,857...2,034,582
JBrowse link
G Ctnnb1 catenin beta 1 located_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004624730:77,876,361...77,887,228
Ensembl chrNW_004624730:77,875,257...77,887,234
JBrowse link
G Des desmin located_in ISO (PMID:11732910) MGI PMID:11732910 NCBI chrNW_004624823:5,624,958...5,632,234
Ensembl chrNW_004624823:5,622,283...5,632,283
JBrowse link
G Dsp desmoplakin ISO RGD PMID:16406610 RGD:1581654 NCBI chrNW_004624756:18,036,103...18,083,379
Ensembl chrNW_004624756:18,035,892...18,083,336
JBrowse link
G Gja1 gap junction protein alpha 1 located_in ISO (PMID:11732910)
in ventricular myocardium
RGD
MGI
PMID:9851942 PMID:11732910 PMID:16515795 RGD:1582675 RGD:1598435 NCBI chrNW_004624798:9,358,996...9,364,413
Ensembl chrNW_004624798:9,359,004...9,364,313
JBrowse link
G Jup junction plakoglobin ISO RGD PMID:16406610 RGD:1581654 NCBI chrNW_004624795:1,954,733...1,972,080
Ensembl chrNW_004624795:1,954,290...1,975,018
JBrowse link
G Nrap nebulin related anchoring protein located_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004624737:32,895,903...32,963,988
Ensembl chrNW_004624737:32,896,006...32,963,983
JBrowse link
G Sptan1 spectrin alpha, non-erythrocytic 1 located_in ISO (PMID:16481394) MGI PMID:16481394 NCBI chrNW_004624760:6,331,554...6,388,953
Ensembl chrNW_004624760:6,331,554...6,386,216
JBrowse link
G Tln2 talin 2 located_in ISO (PMID:11732910) MGI PMID:11732910 NCBI chrNW_004624781:9,626,031...10,030,427
Ensembl chrNW_004624781:9,623,413...9,965,960
JBrowse link
G Vcl vinculin located_in ISO (PMID:11732910), (PMID:16481394) MGI PMID:11732910 PMID:16481394 NCBI chrNW_004624754:7,484,759...7,590,108
Ensembl chrNW_004624754:7,484,773...7,590,108
JBrowse link
G Xirp1 xin actin binding repeat containing 1 located_in ISO (PMID:10021346), (PMID:16708114) MGI PMID:10021346 PMID:16708114 NCBI chrNW_004624731:1,779,004...1,788,668
Ensembl chrNW_004624731:1,782,128...1,787,647
JBrowse link
gap junction term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Calb2 calbindin 2 located_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004624746:13,549,339...13,577,929
Ensembl chrNW_004624746:13,548,540...13,578,501
JBrowse link
G Ccn3 cellular communication network factor 3 located_in IEA UniProt GO_REF:0000043 GO_REF:0000044 NCBI chrNW_004624763:17,573,693...17,580,884
Ensembl chrNW_004624763:17,573,718...17,580,925
JBrowse link
G Dbn1 drebrin 1 located_in ISO (PMID:15084279) MGI PMID:15084279 NCBI chrNW_004624733:12,616,537...12,631,967
Ensembl chrNW_004624733:12,616,423...12,632,133
JBrowse link
G Des desmin located_in ISO PMID:17673670 BHF-UCL PMID:17673670 RGD:6784510 NCBI chrNW_004624823:5,624,958...5,632,234
Ensembl chrNW_004624823:5,622,283...5,632,283
JBrowse link
G Gja1 gap junction protein alpha 1 located_in ISO
IEA
RGD
Ensembl
UniProt
PMID:15048573 PMID:16565306 PMID:16731531 PMID:19808888 GO_REF:0000043 GO_REF:0000044 GO_REF:0000107 GO_REF:0000117 RGD:1580399 RGD:1582674 RGD:1601342 RGD:4892648 NCBI chrNW_004624798:9,358,996...9,364,413
Ensembl chrNW_004624798:9,359,004...9,364,313
JBrowse link
G Gja10 gap junction protein alpha 10 located_in IEA UniProt GO_REF:0000043 GO_REF:0000044 NCBI chrNW_004624799:4,278,097...4,279,588 JBrowse link
G Gja3 gap junction protein alpha 3 located_in ISO
IEA
RGD
UniProt
InterPro
PMID:1659572 GO_REF:0000002 GO_REF:0000043 GO_REF:0000044 GO_REF:0000117 RGD:728416 NCBI chrNW_004624776:17,562,050...17,585,308
Ensembl chrNW_004624776:17,579,913...17,581,121
JBrowse link
G Gja4 gap junction protein alpha 4 located_in ISO
IEA
RGD
UniProt
PMID:10894813 GO_REF:0000043 GO_REF:0000044 RGD:1598434 NCBI chrNW_004624764:17,842,566...17,845,011
Ensembl chrNW_004624764:17,836,180...17,845,011
JBrowse link
G Gja5 gap junction protein alpha 5 located_in IEA UniProt
Ensembl
GO_REF:0000043 GO_REF:0000044 GO_REF:0000107 GO_REF:0000117 NCBI chrNW_004624772:16,810,723...16,828,328
Ensembl chrNW_004624772:16,813,011...16,814,084
JBrowse link
G Gja8 gap junction protein alpha 8 located_in IEA UniProt GO_REF:0000043 GO_REF:0000044 NCBI chrNW_004624772:16,959,615...16,960,937
Ensembl chrNW_004624772:16,959,615...16,960,937
JBrowse link
G Gjb1 gap junction protein beta 1 located_in ISO
IEA
RGD
Ensembl
UniProt
PMID:12119284 GO_REF:0000043 GO_REF:0000044 GO_REF:0000107 RGD:728476 NCBI chrNW_004624903:1,511,347...1,519,265
Ensembl chrNW_004624903:1,517,324...1,519,265
JBrowse link
G Gjb2 gap junction protein beta 2 located_in ISO
IEA
RGD
UniProt
PMID:12064610 PMID:12123633 GO_REF:0000043 GO_REF:0000044 RGD:12738139 RGD:632752 NCBI chrNW_004624776:17,517,824...17,522,683
Ensembl chrNW_004624776:17,518,284...17,522,936
JBrowse link
G Gjb3 gap junction protein beta 3 located_in ISO
IEA
RGD
UniProt
PMID:12123633 GO_REF:0000043 GO_REF:0000044 RGD:12738139 NCBI chrNW_004624764:17,829,214...17,833,509
Ensembl chrNW_004624764:17,829,467...17,833,465
JBrowse link
G Gjb4 gap junction protein beta 4 located_in IEA UniProt GO_REF:0000043 GO_REF:0000044 NCBI chrNW_004624764:17,812,152...17,814,987
Ensembl chrNW_004624764:17,813,922...17,814,722
JBrowse link
G Gjb5 gap junction protein beta 5 located_in IEA UniProt GO_REF:0000043 GO_REF:0000044 NCBI chrNW_004624764:17,807,943...17,811,404
Ensembl chrNW_004624764:17,808,161...17,811,372
JBrowse link
G Gjb6 gap junction protein beta 6 located_in ISO
IEA
RGD
Ensembl
UniProt
PMID:10197766 PMID:12064610 GO_REF:0000043 GO_REF:0000044 GO_REF:0000107 RGD:1599836 RGD:632752 NCBI chrNW_004624776:17,477,947...17,487,304
Ensembl chrNW_004624776:17,477,966...17,487,303
JBrowse link
G Gjb7 gap junction protein beta 7 located_in IEA UniProt GO_REF:0000043 GO_REF:0000044 NCBI chrNW_004624799:7,053,954...7,067,571
Ensembl chrNW_004624799:7,057,990...7,065,205
JBrowse link
G Gjc1 gap junction protein gamma 1 located_in ISO
IEA
RGD
UniProt
PMID:11668048 GO_REF:0000043 GO_REF:0000044 RGD:628534 NCBI chrNW_004624795:443,234...466,222
Ensembl chrNW_004624795:461,691...464,454
JBrowse link
G Gjc2 gap junction protein gamma 2 located_in ISO
IEA
RGD
UniProt
PMID:16203097 GO_REF:0000043 GO_REF:0000044 RGD:13208516 NCBI chrNW_004624937:898,876...905,247 JBrowse link
G Gjc3 gap junction protein gamma 3 located_in IEA UniProt GO_REF:0000043 GO_REF:0000044 NCBI chrNW_004624740:17,068,237...17,092,297 JBrowse link
G Gjd2 gap junction protein delta 2 located_in IEA UniProt GO_REF:0000043 GO_REF:0000044 NCBI chrNW_004624804:1,962,597...1,965,598
Ensembl chrNW_004624804:1,961,865...1,965,673
JBrowse link
G Gjd3 gap junction protein delta 3 located_in IEA UniProt GO_REF:0000043 GO_REF:0000044 NCBI chrNW_004624795:2,930,425...2,933,411
Ensembl chrNW_004624795:2,930,925...2,931,767
JBrowse link
G Gjd4 gap junction protein delta 4 located_in IEA UniProt GO_REF:0000043 GO_REF:0000044 NCBI chrNW_004624805:10,006,548...10,009,592
Ensembl chrNW_004624805:10,006,616...10,009,618
JBrowse link
G Panx1 pannexin 1 located_in IEA Ensembl
UniProt
GO_REF:0000104 GO_REF:0000107 NCBI chrNW_004624735:38,766,973...38,823,284
Ensembl chrNW_004624735:38,766,981...38,819,092
JBrowse link
G Panx2 pannexin 2 located_in IEA UniProt GO_REF:0000104 NCBI chrNW_004624752:565,357...575,064
Ensembl chrNW_004624752:565,357...575,069
JBrowse link
G Panx3 pannexin 3 located_in IEA Ensembl
UniProt
GO_REF:0000104 GO_REF:0000107 NCBI chrNW_004624927:612,686...621,282
Ensembl chrNW_004624927:612,750...620,564
JBrowse link
G Sgsm3 small G protein signaling modulator 3 located_in ISO (PMID:15709751) UniProt PMID:15709751 NCBI chrNW_004624752:8,050,345...8,093,119
Ensembl chrNW_004624752:8,050,342...8,093,105
JBrowse link
G Skp1 S-phase kinase associated protein 1 ISO MMO:0000538 RGD PMID:12117534 RGD:152177518 NCBI chrNW_004624733:38,051,280...38,069,648 JBrowse link
G Specc1l sperm antigen with calponin homology and coiled-coil domains 1 like located_in IEA UniProt GO_REF:0000043 GO_REF:0000044 GO_REF:0000104 NCBI chrNW_004624747:9,687,369...9,837,344
Ensembl chrNW_004624747:9,705,081...9,837,535
JBrowse link
G Tjp1 tight junction protein 1 located_in ISO PMID:29021339 UniProt PMID:29021339 RGD:13825187 NCBI chrNW_004624768:2,826,848...3,034,195
Ensembl chrNW_004624768:2,828,324...3,034,302
JBrowse link
inner dense plaque of desmosome term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Actn1 actinin alpha 1 located_in ISS AgBase GO_REF:0000024 NCBI chrNW_004624734:32,097,364...32,190,162
Ensembl chrNW_004624734:32,097,671...32,192,729
JBrowse link
intercalated disc term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Adra1b adrenoceptor alpha 1B ISO RGD PMID:18467629 RGD:5688343 NCBI chrNW_004624733:29,545,870...29,661,954
Ensembl chrNW_004624733:29,545,789...29,662,028
JBrowse link
G Akap6 A-kinase anchoring protein 6 located_in ISO PMID:9679148 BHF-UCL PMID:9679148 RGD:8553491 NCBI chrNW_004624838:3,992,769...4,393,055
Ensembl chrNW_004624838:3,999,663...4,393,055
JBrowse link
G Ank2 ankyrin 2 located_in ISO (PMID:12571597) BHF-UCL PMID:12571597 NCBI chrNW_004624838:6,490,434...7,023,945
Ensembl chrNW_004624838:6,548,159...7,023,945
JBrowse link
G Ank3 ankyrin 3 located_in ISO (PMID:20877009), (PMID:26187182)
PMID:15579534
RGD
MGI
BHF-UCL
PMID:15579534 PMID:20467587 PMID:20877009 PMID:26187182 RGD:6484228 RGD:6767289 NCBI chrNW_004624791:3,299,287...3,633,631 JBrowse link
G Ankrd23 ankyrin repeat domain 23 ISO RGD PMID:14583192 RGD:2313116 NCBI chrNW_004624749:2,720,459...2,725,672 JBrowse link
G Anxa5 annexin A5 ISO RGD PMID:1833446 RGD:2317540 NCBI chrNW_004624777:1,921,354...1,969,772
Ensembl chrNW_004624777:1,919,602...1,970,059
JBrowse link
G Anxa6 annexin A6 ISO RGD PMID:8252600 RGD:10053657 NCBI chrNW_004624733:41,024,503...41,071,390
Ensembl chrNW_004624733:41,024,514...41,071,353
JBrowse link
G Atp1a1 ATPase Na+/K+ transporting subunit alpha 1 located_in ISO PMID:17442282 BHF-UCL PMID:17442282 RGD:6903343 NCBI chrNW_004624772:12,099,523...12,127,437
Ensembl chrNW_004624772:12,099,435...12,127,737
JBrowse link
G Atp1b1 ATPase Na+/K+ transporting subunit beta 1 located_in ISO (PMID:19683723) BHF-UCL PMID:19683723 NCBI chrNW_004624826:7,058,046...7,076,919
Ensembl chrNW_004624826:7,054,371...7,076,919
JBrowse link
G Atp2a2 ATPase sarcoplasmic/endoplasmic reticulum Ca2+ transporting 2 located_in ISO (PMID:16402920) BHF-UCL PMID:16402920 NCBI chrNW_004624747:21,509,360...21,567,424
Ensembl chrNW_004624747:21,509,366...21,568,098
JBrowse link
G Cav3 caveolin 3 located_in ISO RGD PMID:15961389 RGD:1598749 NCBI chrNW_004624731:3,348,172...3,363,772
Ensembl chrNW_004624731:3,347,984...3,364,581
JBrowse link
G Cdh2 cadherin 2 located_in IEA
ISO
MMO:0000686 Ensembl
TreeGrafter
RGD
PMID:25332002 GO_REF:0000107 GO_REF:0000118 RGD:401851912 NCBI chrNW_004624770:4,333,643...4,540,817
Ensembl chrNW_004624770:4,334,202...4,545,470
JBrowse link
G Ctnna1 catenin alpha 1 located_in ISO (PMID:17535849) MGI PMID:17535849 NCBI chrNW_004624743:31,512,481...31,700,340 JBrowse link
G Ctnnb1 catenin beta 1 located_in ISO
IEA
RGD
Ensembl
PMID:25586361 GO_REF:0000107 RGD:13524855 NCBI chrNW_004624730:77,876,361...77,887,228
Ensembl chrNW_004624730:77,875,257...77,887,234
JBrowse link
G Cxadr CXADR Ig-like cell adhesion molecule located_in IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004624745:5,900,933...5,954,584
Ensembl chrNW_004624745:5,900,886...5,958,765
JBrowse link
G Des desmin located_in ISO (PMID:24200904), (PMID:26724190) UniProt PMID:24200904 PMID:26724190 NCBI chrNW_004624823:5,624,958...5,632,234
Ensembl chrNW_004624823:5,622,283...5,632,283
JBrowse link
G Dsc2 desmocollin 2 located_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004624770:1,748,561...1,778,566
Ensembl chrNW_004624770:1,748,276...1,781,117
JBrowse link
G Dsg2 desmoglein 2 located_in ISO (PMID:23381804)
MMO:0000686
BHF-UCL
RGD
PMID:23381804 PMID:25332002 RGD:401851912 NCBI chrNW_004624770:1,315,021...1,363,472
Ensembl chrNW_004624770:1,313,916...1,364,153
JBrowse link
G Dsp desmoplakin located_in IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004624756:18,036,103...18,083,379
Ensembl chrNW_004624756:18,035,892...18,083,336
JBrowse link
G Dst dystonin located_in ISO (PMID:19932097) UniProt PMID:19932097 NCBI chrNW_004624753:18,321,591...18,778,090
Ensembl chrNW_004624753:18,321,591...18,674,329
JBrowse link
G Fgf13 fibroblast growth factor 13 located_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004624808:7,577,422...8,091,216
Ensembl chrNW_004624808:7,578,286...8,091,811
JBrowse link
G Fhod1 formin homology 2 domain containing 1 located_in ISO (PMID:25125170) MGI PMID:25125170 NCBI chrNW_004624746:19,072,775...19,090,561
Ensembl chrNW_004624746:19,074,290...19,090,337
JBrowse link
G Fxyd1 FXYD domain containing ion transport regulator 1 located_in ISO PMID:23532852 UniProt PMID:23532852 RGD:9685469 NCBI chrNW_004624794:8,368,519...8,372,480
Ensembl chrNW_004624794:8,368,519...8,371,764
JBrowse link
G Gja1 gap junction protein alpha 1 located_in ISO
IEA
MMO:0000686 RGD
Ensembl
PMID:25332002 GO_REF:0000107 RGD:401851912 NCBI chrNW_004624798:9,358,996...9,364,413
Ensembl chrNW_004624798:9,359,004...9,364,313
JBrowse link
G Gja5 gap junction protein alpha 5 located_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004624772:16,810,723...16,828,328
Ensembl chrNW_004624772:16,813,011...16,814,084
JBrowse link
G Hamp hepcidin antimicrobial peptide ISO RGD PMID:17363462 RGD:11041718 NCBI chrNW_004624794:8,257,760...8,259,243
Ensembl chrNW_004624794:8,257,760...8,259,264
JBrowse link
G Itgb1 integrin subunit beta 1 located_in ISO (PMID:11732910) MGI PMID:11732910 NCBI chrNW_004624805:8,748,848...8,800,259
Ensembl chrNW_004624805:8,765,949...8,802,149
JBrowse link
G Jup junction plakoglobin located_in ISO (PMID:22781308), (PMID:22889254), (PMID:23381804) BHF-UCL PMID:22781308 PMID:22889254 PMID:23381804 NCBI chrNW_004624795:1,954,733...1,972,080
Ensembl chrNW_004624795:1,954,290...1,975,018
JBrowse link
G Kcna5 potassium voltage-gated channel subfamily A member 5 located_in ISO
IEA
RGD
TreeGrafter
PMID:20357183 GO_REF:0000118 RGD:7242751 NCBI chrNW_004624860:2,042,325...2,045,953
Ensembl chrNW_004624860:2,039,771...2,045,867
JBrowse link
G Kcnj11 potassium inwardly rectifying channel subfamily J member 11 ISO RGD PMID:23066018 RGD:7296922 NCBI chrNW_004624766:9,012,166...9,015,269
Ensembl chrNW_004624766:9,013,225...9,014,397
JBrowse link
G Kcnj2 potassium inwardly rectifying channel subfamily J member 2 ISO RGD PMID:23640888 RGD:7247427 NCBI chrNW_004624801:365,393...375,802
Ensembl chrNW_004624801:365,361...374,487
JBrowse link
G Obscn obscurin, cytoskeletal calmodulin and titin-interacting RhoGEF located_in ISO (PMID:23392350) UniProt PMID:23392350 NCBI chrNW_004624937:926,090...1,060,233 JBrowse link
G Pak1 p21 (RAC1) activated kinase 1 ISO RGD PMID:14670848 RGD:2299175 NCBI chrNW_004624863:442,465...609,159
Ensembl chrNW_004624863:439,541...525,918
JBrowse link
G Pgm5 phosphoglucomutase 5 located_in ISO (PMID:8175905) UniProt PMID:8175905 NCBI chrNW_004624736:4,599,808...4,804,709
Ensembl chrNW_004624736:4,599,809...4,804,985
JBrowse link
G Pik3ca phosphatidylinositol-4,5-bisphosphate 3-kinase catalytic subunit alpha located_in ISO (PMID:30568254) BHF-UCL PMID:30568254 NCBI chrNW_004624730:56,895,065...56,970,563
Ensembl chrNW_004624730:56,938,215...56,966,137
JBrowse link
G Pkp2 plakophilin 2 located_in ISO
IEA
RGD
TreeGrafter
PMID:19661460 GO_REF:0000118 RGD:6784504 NCBI chrNW_004624778:3,261,446...3,344,204
Ensembl chrNW_004624778:3,261,390...3,342,850
JBrowse link
G Prkca protein kinase C alpha located_in ISO (PMID:27353086) MGI PMID:27353086 NCBI chrNW_004624870:1,589,775...2,023,160
Ensembl chrNW_004624870:1,596,102...2,023,172
JBrowse link
G Ptk2 protein tyrosine kinase 2 ISO RGD PMID:18194601 RGD:2292574 NCBI chrNW_004624735:15,356,911...15,713,219
Ensembl chrNW_004624735:15,461,178...15,714,071
JBrowse link
G Rangrf RAN guanine nucleotide release factor located_in ISO (PMID:18184654) BHF-UCL PMID:18184654 NCBI chrNW_004624786:10,866,724...10,868,136
Ensembl chrNW_004624786:10,866,834...10,867,983
JBrowse link
G Scn1a sodium voltage-gated channel alpha subunit 1 located_in ISO (PMID:15746173) MGI PMID:15746173 NCBI chrNW_004624787:3,767,405...3,939,065
Ensembl chrNW_004624787:3,768,120...3,908,889
JBrowse link
G Scn1b sodium voltage-gated channel beta subunit 1 located_in ISO (PMID:15272007), (PMID:18178574) MGI PMID:15272007 PMID:18178574 NCBI chrNW_004624794:8,439,609...8,449,731
Ensembl chrNW_004624794:8,439,600...8,450,179
JBrowse link
G Scn4b sodium voltage-gated channel beta subunit 4 located_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004624784:13,550,950...13,569,937
Ensembl chrNW_004624784:13,549,815...13,570,026
JBrowse link
G Scn5a sodium voltage-gated channel alpha subunit 5 located_in ISO PMID:18180363
(PMID:15272007), (PMID:15746173), (PMID:17884088), (PMID:18178574), (PMID:18184654), (PMID:20877009), (PMID:21817159), (PMID:26187182)
(PMID:15579534)
BHF-UCL
MGI
RGD
PMID:15272007 PMID:15579534 PMID:15746173 PMID:17884088 PMID:18178574 More... RGD:6484228 RGD:6767295 RGD:6784504 NCBI chrNW_004624731:2,401,358...2,498,212
Ensembl chrNW_004624731:2,401,380...2,498,211
JBrowse link
G Slc2a1 solute carrier family 2 member 1 ISO RGD PMID:8214053 RGD:12879505 NCBI chrNW_004624892:2,110,310...2,148,023
Ensembl chrNW_004624892:2,117,561...2,148,037
JBrowse link
G Slc31a1 solute carrier family 31 member 1 located_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004624760:21,832,924...21,879,089
Ensembl chrNW_004624760:21,832,908...21,849,576
JBrowse link
G Slc4a1 solute carrier family 4 member 1 (Diego blood group) ISO RGD PMID:12898519 RGD:1598723 NCBI chrNW_004624795:739,821...752,773
Ensembl chrNW_004624795:743,646...752,103
JBrowse link
G Slc8a1 solute carrier family 8 member A1 located_in ISO PMID:1514597 BHF-UCL PMID:1514597 RGD:8553384 NCBI chrNW_004624738:21,648,277...22,026,385
Ensembl chrNW_004624738:21,651,489...21,939,927
JBrowse link
G Slc9a1 solute carrier family 9 member A1 ISO RGD PMID:20868366 RGD:7349316 NCBI chrNW_004624764:11,041,118...11,095,892
Ensembl chrNW_004624764:11,039,051...11,095,885
JBrowse link
G Sptbn4 spectrin beta, non-erythrocytic 4 located_in ISO (PMID:26187182) MGI PMID:26187182 NCBI chrNW_004624925:454,092...529,122
Ensembl chrNW_004624925:454,134...529,108
JBrowse link
G Tjp1 tight junction protein 1 located_in ISO (PMID:18603586) MGI PMID:18603586 NCBI chrNW_004624768:2,826,848...3,034,195
Ensembl chrNW_004624768:2,828,324...3,034,302
JBrowse link
G Tmem65 transmembrane protein 65 located_in ISO (PMID:26403541) UniProt PMID:26403541 NCBI chrNW_004624735:30,805,189...30,868,059
Ensembl chrNW_004624735:30,805,189...30,866,490
JBrowse link
G Vamp5 vesicle associated membrane protein 5 located_in ISO (PMID:23180306) BHF-UCL PMID:23180306 NCBI chrNW_004624749:17,546,713...17,556,045
Ensembl chrNW_004624749:17,546,713...17,556,010
JBrowse link
G Vcl vinculin located_in ISO PMID:1514597 BHF-UCL PMID:1514597 RGD:8553384 NCBI chrNW_004624754:7,484,759...7,590,108
Ensembl chrNW_004624754:7,484,773...7,590,108
JBrowse link
G Xirp1 xin actin binding repeat containing 1 located_in ISO (PMID:17766470), (PMID:18682726) UniProt PMID:17766470 PMID:18682726 NCBI chrNW_004624731:1,779,004...1,788,668
Ensembl chrNW_004624731:1,782,128...1,787,647
JBrowse link
intercellular canaliculus term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Abcb11 ATP binding cassette subfamily B member 11 located_in ISO (PMID:12068294), (PMID:23200860) MGI PMID:12068294 PMID:23200860 NCBI chrNW_004624787:6,653,849...6,733,058
Ensembl chrNW_004624787:6,650,772...6,733,195
JBrowse link
G Abcc2 ATP binding cassette subfamily C member 2 located_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004624737:11,593,701...11,686,790
Ensembl chrNW_004624737:11,593,864...11,688,460
JBrowse link
G Dpp4 dipeptidyl peptidase 4 located_in ISO (PMID:12068294) MGI PMID:12068294 NCBI chrNW_004624732:3,460,529...3,535,252
Ensembl chrNW_004624732:3,460,118...3,535,249
JBrowse link
G Mmp13 matrix metallopeptidase 13 ISO bone canaliculus RGD PMID:14751562 RGD:2296059 NCBI chrNW_004624918:2,228,688...2,239,852 JBrowse link
G Mtdh metadherin ISO RGD PMID:15383321 RGD:1359738 NCBI chrNW_004624763:4,905,261...4,967,014
Ensembl chrNW_004624763:4,905,044...4,967,014
JBrowse link
G Stard10 StAR related lipid transfer domain containing 10 located_in IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004624817:4,174,867...4,198,785
Ensembl chrNW_004624817:4,171,599...4,200,415
JBrowse link
G Tjp1 tight junction protein 1 located_in ISO (PMID:12068294) MGI PMID:12068294 NCBI chrNW_004624768:2,826,848...3,034,195
Ensembl chrNW_004624768:2,828,324...3,034,302
JBrowse link
MPP7-DLG1-LIN7 complex term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Dlg1 discs large MAGUK scaffold protein 1 part_of ISO (PMID:17237226) BHF-UCL PMID:17237226 NCBI chrNW_004624730:62,001,547...62,223,098
Ensembl chrNW_004624730:62,002,280...62,223,319
JBrowse link
G Lin7a lin-7 homolog A, crumbs cell polarity complex component part_of IEA UniProt GO_REF:0000104 NCBI chrNW_004624837:104,948...258,085 JBrowse link
G Lin7b lin-7 homolog B, crumbs cell polarity complex component part_of IEA UniProt GO_REF:0000104 NCBI chrNW_004624832:4,965,537...4,968,574
Ensembl chrNW_004624832:4,965,537...4,968,516
JBrowse link
G Lin7c lin-7 homolog C, crumbs cell polarity complex component part_of IEA UniProt GO_REF:0000104 NCBI chrNW_004624766:17,159,205...17,167,119
Ensembl chrNW_004624766:17,161,179...17,167,073
JBrowse link
G LOC101715334 protein lin-7 homolog A-like part_of IEA UniProt GO_REF:0000104 NCBI chrNW_004624750:16,038,822...16,039,537 JBrowse link
G Mpp7 MAGUK p55 scaffold protein 7 part_of ISO (PMID:17237226), (PMID:20702775) BHF-UCL PMID:17237226 PMID:20702775 NCBI chrNW_004624805:6,430,817...6,636,865
Ensembl chrNW_004624805:6,429,918...6,577,479
JBrowse link
outer dense plaque of desmosome term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Actn1 actinin alpha 1 located_in ISS AgBase GO_REF:0000024 NCBI chrNW_004624734:32,097,364...32,190,162
Ensembl chrNW_004624734:32,097,671...32,192,729
JBrowse link
paranodal junction term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ank2 ankyrin 2 is_active_in ISO (PMID:16687515) MGI PMID:16687515 NCBI chrNW_004624838:6,490,434...7,023,945
Ensembl chrNW_004624838:6,548,159...7,023,945
JBrowse link
G Cldn19 claudin 19 located_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004624892:1,974,608...1,982,042
Ensembl chrNW_004624892:1,974,534...1,982,114
JBrowse link
G Cntnap1 contactin associated protein 1 located_in IEA UniProt GO_REF:0000044 NCBI chrNW_004624795:1,470,234...1,482,066
Ensembl chrNW_004624795:1,470,760...1,481,973
JBrowse link
G Cntnap2 contactin associated protein 2 located_in IEA UniProt GO_REF:0000044 NCBI chrNW_004624800:7,182,588...9,280,407
Ensembl chrNW_004624800:7,181,020...9,279,678
JBrowse link
G Jam3 junctional adhesion molecule 3 located_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004624812:8,644,002...8,707,257
Ensembl chrNW_004624812:8,643,921...8,707,351
JBrowse link
G Kcna2 potassium voltage-gated channel subfamily A member 2 located_in IEA UniProt GO_REF:0000044 NCBI chrNW_004624772:6,298,113...6,311,614
Ensembl chrNW_004624772:6,305,550...6,309,906
JBrowse link
G Marveld2 MARVEL domain containing 2 located_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004624905:277,718...300,821
Ensembl chrNW_004624905:284,356...297,865
JBrowse link
G Nfasc neurofascin located_in ISO (PMID:18048693), (PMID:19185024) UniProt PMID:18048693 PMID:19185024 NCBI chrNW_004624807:6,097,507...6,260,880
Ensembl chrNW_004624807:6,103,524...6,226,583
JBrowse link
G Sirt2 sirtuin 2 located_in ISO (PMID:16933150)
PMID:21949390
RGD
UniProt
PMID:16933150 PMID:17344398 PMID:21949390 RGD:8553877 RGD:8655533 NCBI chrNW_004624794:12,239,363...12,259,561
Ensembl chrNW_004624794:12,235,263...12,259,276
JBrowse link
G Sptan1 spectrin alpha, non-erythrocytic 1 is_active_in ISO (PMID:16687515) MGI PMID:16687515 NCBI chrNW_004624760:6,331,554...6,388,953
Ensembl chrNW_004624760:6,331,554...6,386,216
JBrowse link
G Sptbn2 spectrin beta, non-erythrocytic 2 is_active_in ISO (PMID:16687515) MGI PMID:16687515 NCBI chrNW_004624767:19,694,471...19,734,653
Ensembl chrNW_004624767:19,694,241...19,734,650
JBrowse link
slit diaphragm term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Cd2ap CD2 associated protein is_active_in ISO (PMID:11733379) MGI PMID:11733379 NCBI chrNW_004624754:13,420,594...13,511,672
Ensembl chrNW_004624754:13,420,603...13,511,523
JBrowse link
G F11r F11 receptor ISO RGD PMID:19478094 RGD:7488941 NCBI chrNW_004624794:346,281...367,132
Ensembl chrNW_004624794:346,387...367,428
JBrowse link
G Kirrel2 kirre like nephrin family adhesion molecule 2 located_in ISO (PMID:21306299) MGI PMID:21306299 NCBI chrNW_004624794:10,138,586...10,148,506
Ensembl chrNW_004624794:10,139,423...10,148,516
JBrowse link
G Magi2 membrane associated guanylate kinase, WW and PDZ domain containing 2 located_in ISO PMID:15994232 UniProt PMID:15994232 RGD:8553727 NCBI chrNW_004624739:27,132,533...28,430,765
Ensembl chrNW_004624739:27,134,993...28,430,686
JBrowse link
G Nphs1 NPHS1 adhesion molecule, nephrin located_in ISO PMID:15994232 UniProt PMID:15994232 RGD:8553727 NCBI chrNW_004624794:10,117,464...10,138,511
Ensembl chrNW_004624794:10,116,777...10,135,963
JBrowse link
G Nphs2 NPHS2 stomatin family member, podocin located_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004624771:2,828,758...2,847,995
Ensembl chrNW_004624771:2,828,104...2,849,254
JBrowse link
G Nrxn1 neurexin 1 located_in ISO RGD PMID:21048075 RGD:13207335 NCBI chrNW_004624738:31,134,551...32,273,596
Ensembl chrNW_004624738:31,133,346...32,273,565
JBrowse link
G Podxl podocalyxin like located_in ISO PMID:15994232 UniProt PMID:15994232 RGD:8553727 NCBI chrNW_004624783:4,840,072...4,888,709
Ensembl chrNW_004624783:4,840,164...4,888,705
JBrowse link
G Ppp3ca protein phosphatase 3 catalytic subunit alpha located_in ISO RGD PMID:27009276 RGD:11537650 NCBI chrNW_004624830:6,318,352...6,584,232
Ensembl chrNW_004624830:6,317,968...6,581,892
JBrowse link
G Trpc6 transient receptor potential cation channel subfamily C member 6 located_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004624878:1,321,022...1,469,964
Ensembl chrNW_004624878:1,321,497...1,468,865
JBrowse link
spot adherens junction term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Pgm5 phosphoglucomutase 5 located_in ISO (PMID:8175905) UniProt PMID:8175905 NCBI chrNW_004624736:4,599,808...4,804,709
Ensembl chrNW_004624736:4,599,809...4,804,985
JBrowse link
subapical complex term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Crb1 crumbs cell polarity complex component 1 part_of ISO (PMID:16885194), (PMID:17234588) MGI PMID:16885194 PMID:17234588 NCBI chrNW_004624798:2,861,481...2,999,387
Ensembl chrNW_004624798:2,861,520...2,999,697
JBrowse link
G Crb2 crumbs cell polarity complex component 2 part_of ISO (PMID:16885194) MGI PMID:16885194 NCBI chrNW_004624760:11,576,683...11,598,354
Ensembl chrNW_004624760:11,579,163...11,598,287
JBrowse link
G Crb3 crumbs cell polarity complex component 3 part_of ISO (PMID:16885194) MGI PMID:16885194 NCBI chrNW_004624828:3,571,833...3,578,281 JBrowse link
G Mpdz multiple PDZ domain crumbs cell polarity complex component part_of ISO (PMID:16885194) MGI PMID:16885194 NCBI chrNW_004624736:17,392,132...17,555,612
Ensembl chrNW_004624736:17,397,405...17,533,674
JBrowse link
G Patj PATJ crumbs cell polarity complex component part_of ISO (PMID:16885194) MGI PMID:16885194 NCBI chrNW_004624742:31,510,784...31,725,256
Ensembl chrNW_004624742:31,550,498...31,719,424
JBrowse link
tight junction term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G