Send us a Message



Submit Data |  Help |  Video Tutorials |  News |  Publications |  Download |  REST API |  Citing RGD |  Contact   

ONTOLOGY REPORT - ANNOTATIONS


Term:intermediate filament
go back to main search page
Accession:GO:0005882 term browser browse the term
Definition:A cytoskeletal structure that forms a distinct elongated structure, characteristically 10 nm in diameter, that occurs in the cytoplasm of eukaryotic cells. Intermediate filaments form a fibrous system, composed of chemically heterogeneous subunits and involved in mechanically integrating the various components of the cytoplasmic space. Intermediate filaments may be divided into five chemically distinct classes: Type I, acidic keratins; Type II, basic keratins; Type III, including desmin, vimentin and others; Type IV, neurofilaments and related filaments; and Type V, lamins.
Synonyms:related_synonym: intermediate filament associated protein;   type I intermediate filament associated protein;   type II intermediate filament associated protein
 xref: FMA:63851;   NIF_Subcellular:sao952483289;   Wikipedia:Intermediate_filament



show annotations for term's descendants           Sort by:
intermediate filament term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G AABR07033579.1 located_in IEA GO_REF:0000043 UniProt GO_REF:0000043
G AABR07033579.3 located_in IEA GO_REF:0000043 UniProt GO_REF:0000043
G Adora2a adenosine A2a receptor located_in IDA RGD PMID:16644907 RGD:1625443 NCBI chr20:13,315,848...13,333,386 JBrowse link
G Aldh4a1 aldehyde dehydrogenase 4 family, member A1 located_in IEA GO_REF:0000043 UniProt GO_REF:0000043 NCBI chr 5:151,880,002...151,905,491 JBrowse link
G Bbln bublin coiled coil protein located_in ISO (PMID:33857431) RGD PMID:33857431 NCBI chr 3:15,674,577...15,677,322 JBrowse link
G Bfsp1 beaded filament structural protein 1 located_in
is_active_in
ISS
IEA
IBA
ISO
GO_REF:0000024
GO_REF:0000107
GO_REF:0000033
(PMID:15037121), (PMID:18178558), (PMID:27559293)
UniProt
Ensembl
GO_Central
RGD
PMID:15037121 PMID:18178558 PMID:27559293 GO_REF:0000024 GO_REF:0000033 GO_REF:0000107 NCBI chr 3:131,195,087...131,252,668 JBrowse link
G Bfsp2 beaded filament structural protein 2 located_in
is_active_in
ISS
ISO
IBA
IEA
GO_REF:0000024
(PMID:18178558), (PMID:27559293)
GO_REF:0000033
GO_REF:0000043
UniProt
RGD
GO_Central
PMID:18178558 PMID:27559293 GO_REF:0000024 GO_REF:0000033 GO_REF:0000043 NCBI chr 8:104,006,226...104,063,399 JBrowse link
G Des desmin located_in
is_active_in
IEA
IBA
ISO
GO_REF:0000043
GO_REF:0000033
GO_REF:0000107
(PMID:16917092)
UniProt
GO_Central
Ensembl
RGD
PMID:16917092 GO_REF:0000033 GO_REF:0000043 GO_REF:0000107 NCBI chr 9:84,299,626...84,307,344 JBrowse link
G Dsp desmoplakin located_in IBA
ISO
GO_REF:0000033
(PMID:16917092)
GO_Central
RGD
PMID:16917092 GO_REF:0000033 NCBI chr17:26,623,602...26,671,692 JBrowse link
G Dst dystonin located_in
is_active_in
IBA
ISO
GO_REF:0000033
(PMID:19932097)
GO_Central
RGD
PMID:19932097 GO_REF:0000033 NCBI chr 9:36,135,657...36,529,617 JBrowse link
G Eif6 eukaryotic translation initiation factor 6 located_in ISO (PMID:9374518) RGD PMID:9374518 NCBI chr 3:144,325,038...144,331,396 JBrowse link
G ENSRNOG00000064720 located_in IEA GO_REF:0000043 UniProt GO_REF:0000043
G Evpl envoplakin located_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr10:101,458,227...101,474,778 JBrowse link
G Gfap glial fibrillary acidic protein located_in
is_active_in
IEA
IBA
ISO
GO_REF:0000043
GO_REF:0000033
(PMID:11487638), (PMID:12533615), (PMID:12878680), (PMID:15656993), (PMID:9364068)
UniProt
GO_Central
RGD
PMID:9364068 PMID:11487638 PMID:12533615 PMID:12878680 PMID:15656993 GO_REF:0000033 GO_REF:0000043 NCBI chr10:88,352,987...88,361,661 JBrowse link
G Gja1 gap junction protein, alpha 1 located_in ISO (PMID:16917092) RGD PMID:16917092 NCBI chr20:36,302,490...36,315,010 JBrowse link
G Hspa8 heat shock protein family A (Hsp70) member 8 IDA RGD PMID:7721954 RGD:10059404 NCBI chr 8:50,080,514...50,084,376 JBrowse link
G Iffo1 intermediate filament family orphan 1 located_in IEA GO_REF:0000043 UniProt GO_REF:0000043 NCBI chr 4:157,945,075...157,962,302 JBrowse link
G Iffo2 intermediate filament family orphan 2 located_in IEA GO_REF:0000043 UniProt GO_REF:0000043 NCBI chr 5:151,830,900...151,876,948 JBrowse link
G Ina internexin neuronal intermediate filament protein, alpha is_active_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr 1:255,838,129...255,849,680 JBrowse link
G Jup junction plakoglobin located_in IEA
ISO
GO_REF:0000107
(PMID:16917092)
Ensembl
RGD
PMID:16917092 GO_REF:0000107 NCBI chr10:85,300,438...85,327,378 JBrowse link
G Krt12 keratin 12 located_in IEA GO_REF:0000043 UniProt GO_REF:0000043 NCBI chr10:84,370,803...84,378,103 JBrowse link
G Krt14 keratin 14 located_in ISO (PMID:10852826) RGD PMID:10852826 NCBI chr10:85,137,786...85,142,054 JBrowse link
G Krt15 keratin 15 TAS RGD PMID:15085952 RGD:1303986 NCBI chr10:85,066,797...85,070,614 JBrowse link
G Krt16 keratin 16 located_in ISO (PMID:12445204) RGD PMID:12445204 NCBI chr10:85,669,276...85,672,211 JBrowse link
G Krt17 keratin 17 located_in TAS
IEA
GO_REF:0000043 UniProt
RGD
PMID:15085952 GO_REF:0000043, RGD:1303986 NCBI chr10:85,679,068...85,683,792 JBrowse link
G Krt18 keratin 18 located_in ISO
IEA
(PMID:10852826)
GO_REF:0000043
(PMID:10747083)
RGD
UniProt
PMID:10747083 PMID:10852826 GO_REF:0000043 NCBI chr 7:135,036,168...135,039,844 JBrowse link
G Krt19 keratin 19 located_in IEA GO_REF:0000043 UniProt GO_REF:0000043 NCBI chr10:85,075,835...85,080,552 JBrowse link
G Krt20 keratin 20 located_in IEA GO_REF:0000043 UniProt GO_REF:0000043 NCBI chr10:84,880,952...84,890,285 JBrowse link
G Krt222 keratin 222 located_in IEA GO_REF:0000043 UniProt GO_REF:0000043 NCBI chr10:84,184,137...84,196,122 JBrowse link
G Krt23 keratin 23 located_in IEA GO_REF:0000043 UniProt GO_REF:0000043 NCBI chr10:84,930,603...84,946,929 JBrowse link
G Krt24 keratin 24 TAS RGD PMID:15085952 RGD:1303986 NCBI chr10:84,232,163...84,237,299 JBrowse link
G Krt26 keratin 26 located_in IEA GO_REF:0000043 UniProt GO_REF:0000043 NCBI chr10:84,280,965...84,295,575 JBrowse link
G Krt27 keratin 27 located_in IEA GO_REF:0000043 UniProt GO_REF:0000043 NCBI chr10:84,298,684...84,303,967 JBrowse link
G Krt28 keratin 28 located_in IEA GO_REF:0000043 UniProt GO_REF:0000043 NCBI chr10:84,318,352...84,328,693 JBrowse link
G Krt31 keratin 31 located_in IEA GO_REF:0000043 UniProt GO_REF:0000043 NCBI chr10:85,479,533...85,483,300 JBrowse link
G Krt32 keratin 32 located_in IEA GO_REF:0000043 UniProt GO_REF:0000043 NCBI chr10:85,013,551...85,020,578 JBrowse link
G Krt33a keratin 33A located_in IEA GO_REF:0000043 UniProt GO_REF:0000043 NCBI chr10:84,942,584...84,947,544 JBrowse link
G Krt33b keratin 33B located_in IEA GO_REF:0000043 UniProt GO_REF:0000043 NCBI chr10:84,955,838...84,961,673 JBrowse link
G Krt34 keratin 34 located_in IEA GO_REF:0000043 UniProt GO_REF:0000043 NCBI chr10:85,470,391...85,474,501 JBrowse link
G Krt35 keratin 35 located_in IEA GO_REF:0000043 UniProt GO_REF:0000043 NCBI chr10:85,026,171...85,029,568 JBrowse link
G Krt39 keratin 39 located_in TAS
IEA
GO_REF:0000043 UniProt
RGD
PMID:15085952 GO_REF:0000043, RGD:1303986 NCBI chr10:84,473,946...84,480,552 JBrowse link
G Krt40 keratin 40 located_in IEA GO_REF:0000043 UniProt GO_REF:0000043 NCBI chr10:84,496,470...84,502,756 JBrowse link
G Krt42 keratin 42 located_in IEA GO_REF:0000043 UniProt GO_REF:0000043 NCBI chr10:85,185,186...85,246,520 JBrowse link
G Krt5 keratin 5 located_in ISO (PMID:10852826) RGD PMID:10852826 NCBI chr 7:132,846,132...132,851,861 JBrowse link
G Krt75 keratin 75 part_of ISO (PMID:15086549) RGD PMID:15086549 NCBI chr 7:132,687,101...132,697,360 JBrowse link
G Krt76 keratin 76 TAS RGD PMID:15085952 RGD:1303986 NCBI chr 7:133,016,990...133,025,475 JBrowse link
G Krt8 keratin 8 located_in ISO (PMID:10852826)
(PMID:10747083)
RGD PMID:10747083 PMID:10852826 NCBI chr 7:135,002,886...135,010,339 JBrowse link
G Krt80 keratin 80 located_in ISO (PMID:20843789) RGD PMID:20843789 NCBI chr 7:132,463,216...132,485,134 JBrowse link
G Krt83 keratin 83 TAS RGD PMID:15085952 RGD:1303986 NCBI chr 7:132,604,180...132,610,869 JBrowse link
G Krt88 keratin 88 located_in IEA GO_REF:0000043 UniProt GO_REF:0000043 NCBI chr 7:132,566,087...132,571,946 JBrowse link
G Krt9 keratin 9 located_in IEA GO_REF:0000043 UniProt GO_REF:0000043 NCBI chr10:85,120,962...85,127,228 JBrowse link
G Krtap16-5 keratin associated protein 16-5 located_in IEA GO_REF:0000043 UniProt GO_REF:0000043 NCBI chr11:28,249,212...28,249,796 JBrowse link
G Krtap19-5 keratin associated protein 19-5 located_in IEA GO_REF:0000043 UniProt GO_REF:0000043 NCBI chr11:28,191,616...28,191,816 JBrowse link
G Krtap6-5 keratin associated protein 6-5 located_in IEA GO_REF:0000043 UniProt GO_REF:0000043
G Krtap8-1 keratin associated protein 8-1 located_in IEA GO_REF:0000043 UniProt GO_REF:0000043 NCBI chr11:28,717,798...28,718,355 JBrowse link
G Lmna lamin A/C located_in IEA GO_REF:0000043 UniProt GO_REF:0000043 NCBI chr 2:176,237,564...176,265,301 JBrowse link
G Lmnb1 lamin B1 located_in IEA GO_REF:0000043 UniProt GO_REF:0000043 NCBI chr18:52,373,939...52,413,284 JBrowse link
G LOC102550973 keratin-associated protein 19-4-like located_in IEA GO_REF:0000043 UniProt GO_REF:0000043 NCBI chr11:28,182,928...28,183,185 JBrowse link
G LOC102551406 keratin-associated protein 20-2-like located_in IEA GO_REF:0000043 UniProt GO_REF:0000043 NCBI chr11:28,412,307...28,412,508 JBrowse link
G LOC102551497 keratin-associated protein 20-2-like located_in IEA GO_REF:0000043 UniProt GO_REF:0000043 NCBI chr11:28,419,189...28,419,365 JBrowse link
G LOC102551771 keratin-associated protein 20-2-like located_in IEA GO_REF:0000043 UniProt GO_REF:0000043 NCBI chr11:28,438,073...28,443,053 JBrowse link
G LOC102552244 keratin-associated protein 20-2-like located_in IEA GO_REF:0000043 UniProt GO_REF:0000043 NCBI chr11:28,481,545...28,481,940 JBrowse link
G LOC134481131 keratin-associated protein 20-2-like located_in IEA GO_REF:0000043 UniProt GO_REF:0000043
G Macf1 microtubule-actin crosslinking factor 1 located_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr 5:140,908,829...141,234,127 JBrowse link
G Mns1 meiosis-specific nuclear structural 1 located_in ISO (PMID:8032679) RGD PMID:8032679 NCBI chr 8:73,148,877...73,169,570 JBrowse link
G Myo5a myosin VA located_in ISO (PMID:8188282) RGD PMID:8188282 NCBI chr 8:84,692,524...84,860,564 JBrowse link
G Nefh neurofilament heavy chain located_in IDA
IEA
GO_REF:0000043
PMID:11034913
UniProt
RGD
PMID:2230956 PMID:11034913 GO_REF:0000043, RGD:729261, RGD:8554743 NCBI chr14:84,044,428...84,054,413 JBrowse link
G Nefl neurofilament light chain located_in
is_active_in
ISO
IBA
(PMID:11034913), (PMID:2493000)
GO_REF:0000033
RGD
GO_Central
PMID:2493000 PMID:11034913 GO_REF:0000033 NCBI chr15:46,477,330...46,481,203 JBrowse link
G Nefm neurofilament medium chain is_active_in
located_in
IDA
IBA
IEA
GO_REF:0000033
GO_REF:0000117
GO_Central
UniProt
RGD
PMID:1321159 GO_REF:0000033 GO_REF:0000117, RGD:727531 NCBI chr15:46,535,857...46,541,161 JBrowse link
G Nes nestin located_in
is_active_in
IDA
IEA
ISO
IBA
GO_REF:0000107
(PMID:9364068)
GO_REF:0000033
GO_REF:0000043
Ensembl
RGD
GO_Central
UniProt
PMID:9364068 PMID:12832492 GO_REF:0000033 GO_REF:0000043 GO_REF:0000107, RGD:632375 NCBI chr 2:175,735,715...175,745,631 JBrowse link
G Nme1 NME/NM23 nucleoside diphosphate kinase 1 located_in IDA RGD PMID:11082283 RGD:2299080 NCBI chr10:79,403,939...79,426,620 JBrowse link
G Nme2 NME/NM23 nucleoside diphosphate kinase 2 located_in IDA RGD PMID:11082283 RGD:2299080 NCBI chr10:79,394,999...79,400,418 JBrowse link
G Pkp2 plakophilin 2 located_in ISO (PMID:16917092) RGD PMID:16917092 NCBI chr11:98,165,974...98,231,916 JBrowse link
G Plec plectin located_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr 7:109,768,447...109,829,798 JBrowse link
G Ppl periplakin located_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr10:10,450,919...10,496,575 JBrowse link
G Prph peripherin located_in ISO
IEA
(PMID:12642616)
GO_REF:0000043
GO_REF:0000117
RGD
UniProt
PMID:12642616 GO_REF:0000043 GO_REF:0000117 NCBI chr 7:132,096,888...132,101,070 JBrowse link
G Rtn2 reticulon 2 located_in ISS
ISO
GO_REF:0000024
(PMID:10672514)
UniProt
RGD
PMID:10672514 GO_REF:0000024 NCBI chr 1:78,935,056...78,948,069 JBrowse link
G Slc1a4 solute carrier family 1 member 4 located_in ISO (PMID:12533615) RGD PMID:12533615 NCBI chr14:98,718,646...98,761,672 JBrowse link
G Sync syncoilin, intermediate filament protein located_in IEA GO_REF:0000043
GO_REF:0000002
UniProt
InterPro
GO_REF:0000002 GO_REF:0000043 NCBI chr 5:141,631,837...141,656,184 JBrowse link
G Synm synemin is_active_in
located_in
IDA
IBA
ISO
GO_REF:0000033
(PMID:11737198)
GO_Central
RGD
PMID:11737198 PMID:11353857 GO_REF:0000033, RGD:1302391 NCBI chr 1:121,333,712...121,363,652 JBrowse link
G Tas1r2 taste 1 receptor member 2 located_in IEA GO_REF:0000043 UniProt GO_REF:0000043 NCBI chr 5:151,909,617...151,925,760 JBrowse link
G Tlk2 tousled-like kinase 2 located_in ISO (PMID:10455159) RGD PMID:10455159 NCBI chr10:90,648,623...90,748,427 JBrowse link
G Vim vimentin located_in
is_active_in
IEA
IBA
ISO
ISS
GO_REF:0000107
GO_REF:0000033
(PMID:11487638), (PMID:15037121), (PMID:17882221), (PMID:20103531), (PMID:2493000), (PMID:8188282)
(PMID:11889032), (PMID:29496907)
GO_REF:0000024
Ensembl
GO_Central
RGD
UniProt
PMID:2493000 PMID:8188282 PMID:11487638 PMID:11889032 PMID:15037121 More... GO_REF:0000024 GO_REF:0000033 GO_REF:0000107 NCBI chr17:81,577,261...81,585,746 JBrowse link
glial filament term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Gsn gelsolin IDA MMO:0000662 RGD PMID:25744577 RGD:11055426 NCBI chr 3:38,982,605...39,035,849 JBrowse link
keratin filament term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G AABR07001416.1 is_active_in IBA GO_REF:0000033 GO_Central GO_REF:0000033
G AABR07030464.1 located_in IEA GO_REF:0000002 InterPro GO_REF:0000002
G AC099183.3 located_in IEA GO_REF:0000002 InterPro GO_REF:0000002
G Casp14 caspase 14 IDA RGD PMID:16142807 RGD:2313178 NCBI chr 7:10,929,759...10,932,591 JBrowse link
G Csnk1a1 casein kinase 1, alpha 1 located_in IEA
ISO
ISS
GO_REF:0000107
(PMID:23902688)
GO_REF:0000024
Ensembl
RGD
UniProt
PMID:23902688 GO_REF:0000024 GO_REF:0000107 NCBI chr18:57,285,156...57,320,540 JBrowse link
G ENSRNOG00000062620 located_in IEA GO_REF:0000002 InterPro GO_REF:0000002
G ENSRNOG00000068861 located_in IEA GO_REF:0000002 InterPro GO_REF:0000002
G ENSRNOG00000070302 located_in IEA GO_REF:0000104 UniProt GO_REF:0000104
G Eppk1 epiplakin 1 located_in ISO
IBA
(PMID:23398049)
GO_REF:0000033
(PMID:18285451), (PMID:20926261)
RGD
GO_Central
PMID:18285451 PMID:20926261 PMID:23398049 GO_REF:0000033 NCBI chr 7:107,816,919...107,842,946 JBrowse link
G Fam83h family with sequence similarity 83, member H located_in ISO
IBA
(PMID:23902688)
GO_REF:0000033
RGD
GO_Central
PMID:23902688 GO_REF:0000033 NCBI chr 7:107,716,431...107,724,619 JBrowse link
G Fbf1 Fas binding factor 1 located_in ISO (PMID:18838552) RGD PMID:18838552 NCBI chr10:101,375,769...101,401,624 JBrowse link
G Gm11555 predicted gene 11555 located_in IEA GO_REF:0000002 InterPro GO_REF:0000002
G Gper1 G protein-coupled estrogen receptor 1 located_in ISO
IEA
ISS
(PMID:21149639)
GO_REF:0000107
GO_REF:0000024
RGD
Ensembl
UniProt
PMID:21149639 GO_REF:0000024 GO_REF:0000107 NCBI chr12:15,217,217...15,222,679 JBrowse link
G Krt1 keratin 1 located_in
is_active_in
IEA
ISO
IBA
GO_REF:0000107
(PMID:27595935)
(PMID:2404337)
GO_REF:0000033
GO_REF:0000002
Ensembl
RGD
GO_Central
InterPro
PMID:2404337 PMID:27595935 GO_REF:0000002 GO_REF:0000033 GO_REF:0000107 NCBI chr 7:132,976,618...132,981,844 JBrowse link
G Krt10 keratin 10 located_in
is_active_in
IEA
ISO
IBA
GO_REF:0000107
(PMID:27595935)
(PMID:14673151), (PMID:24751727), (PMID:7679677)
GO_REF:0000033
Ensembl
RGD
GO_Central
PMID:7679677 PMID:14673151 PMID:24751727 PMID:27595935 GO_REF:0000033 GO_REF:0000107 NCBI chr10:84,338,695...84,343,279 JBrowse link
G Krt13 keratin 13 located_in
is_active_in
ISO
IBA
(PMID:9714826)
GO_REF:0000033
RGD
GO_Central
PMID:9714826 GO_REF:0000033 NCBI chr10:85,051,887...85,056,099 JBrowse link
G Krt14 keratin 14 located_in
is_active_in
IDA
ISO
IBA
PMID:8950218
(PMID:22705788), (PMID:7679677)
(PMID:14673151), (PMID:19487454)
GO_REF:0000033
RGD
GO_Central
PMID:7679677 PMID:14673151 PMID:19487454 PMID:22705788 PMID:8950218 GO_REF:0000033, RGD:633113 NCBI chr10:85,137,786...85,142,054 JBrowse link
G Krt15 keratin 15 TAS RGD PMID:15085952 RGD:1303986 NCBI chr10:85,066,797...85,070,614 JBrowse link
G Krt17 keratin 17 TAS RGD PMID:15085952 RGD:1303986 NCBI chr10:85,679,068...85,683,792 JBrowse link
G Krt18 keratin 18 located_in
is_active_in
IDA
ISO
IBA
(PMID:10852826), (PMID:16424149)
(PMID:21930775)
GO_REF:0000033
RGD
GO_Central
PMID:10852826 PMID:16424149 PMID:21930775 PMID:1709097 GO_REF:0000033, RGD:1624319 NCBI chr 7:135,036,168...135,039,844 JBrowse link
G Krt2 keratin 2 located_in
is_active_in
IEA
ISO
IBA
GO_REF:0000107
(PMID:24751727)
GO_REF:0000033
Ensembl
RGD
GO_Central
PMID:24751727 GO_REF:0000033 GO_REF:0000107 NCBI chr 7:132,940,879...132,948,031 JBrowse link
G Krt24 keratin 24 TAS RGD PMID:15085952 RGD:1303986 NCBI chr10:84,232,163...84,237,299 JBrowse link
G Krt25 keratin 25 located_in IEA
ISO
GO_REF:0000107
(PMID:32296183)
Ensembl
RGD
PMID:32296183 GO_REF:0000107 NCBI chr10:84,267,399...84,275,025 JBrowse link
G Krt36 keratin 36 located_in ISO (PMID:32296183) RGD PMID:32296183 NCBI chr10:85,036,379...85,040,003 JBrowse link
G Krt39 keratin 39 TAS RGD PMID:15085952 RGD:1303986 NCBI chr10:84,473,946...84,480,552 JBrowse link
G Krt4 keratin 4 located_in
is_active_in
ISO
IBA
IEA
(PMID:21371075)
GO_REF:0000033
GO_REF:0000107
RGD
GO_Central
Ensembl
PMID:21371075 GO_REF:0000033 GO_REF:0000107 NCBI chr 7:133,046,067...133,052,027 JBrowse link
G Krt5 keratin 5 located_in
is_active_in
IDA
ISO
IBA
IEA
(PMID:22705788), (PMID:7679677)
(PMID:21464233), (PMID:7679677)
GO_REF:0000033
GO_REF:0000107
RGD
GO_Central
Ensembl
PMID:7679677 PMID:21464233 PMID:22705788 PMID:14551252 GO_REF:0000033 GO_REF:0000107, RGD:1302413 NCBI chr 7:132,846,132...132,851,861 JBrowse link
G Krt6a keratin 6A is_active_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr 7:132,829,278...132,833,665 JBrowse link
G Krt6c keratin 6c is_active_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr 7:132,799,608...132,804,045 JBrowse link
G Krt7 keratin 7 located_in
is_active_in
IEA
IBA
GO_REF:0000002
GO_REF:0000033
InterPro
GO_Central
GO_REF:0000002 GO_REF:0000033 NCBI chr 7:134,407,626...134,423,787 JBrowse link
G Krt71 keratin 71 is_active_in
located_in
IBA
ISO
GO_REF:0000033
(PMID:22592156), (PMID:32296183)
(PMID:17920809)
GO_Central
RGD
PMID:17920809 PMID:22592156 PMID:32296183 GO_REF:0000033 NCBI chr 7:132,873,532...132,898,975 JBrowse link
G Krt72 keratin 72 is_active_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr 7:132,910,379...132,920,844 JBrowse link
G Krt73 keratin 73 located_in
is_active_in
IEA
IBA
GO_REF:0000002
GO_REF:0000033
InterPro
GO_Central
GO_REF:0000002 GO_REF:0000033 NCBI chr 7:132,927,812...132,936,323 JBrowse link
G Krt75 keratin 75 is_active_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr 7:132,687,101...132,697,360 JBrowse link
G Krt76 keratin 76 is_active_in TAS
IBA
GO_REF:0000033 GO_Central
RGD
PMID:15085952 GO_REF:0000033, RGD:1303986 NCBI chr 7:133,016,990...133,025,475 JBrowse link
G Krt77 keratin 77 located_in
is_active_in
IEA
IBA
GO_REF:0000002
GO_REF:0000033
InterPro
GO_Central
GO_REF:0000002 GO_REF:0000033 NCBI chr 7:132,989,727...133,002,087 JBrowse link
G Krt78 keratin 78 is_active_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr 7:133,074,193...133,081,536 JBrowse link
G Krt79 keratin 79 is_active_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr 7:133,056,710...133,067,750 JBrowse link
G Krt8 keratin 8 located_in IDA
IEA
ISO
GO_REF:0000002
(PMID:10852826)
InterPro
RGD
PMID:10852826 PMID:1370816 PMID:1709097 GO_REF:0000002, RGD:633141, RGD:1624319 NCBI chr 7:135,002,886...135,010,339 JBrowse link
G Krt80 keratin 80 located_in
is_active_in
IEA
IBA
GO_REF:0000002
GO_REF:0000033
InterPro
GO_Central
GO_REF:0000002 GO_REF:0000033 NCBI chr 7:132,463,216...132,485,134 JBrowse link
G Krt81 keratin 81 is_active_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr 7:132,577,112...132,582,238 JBrowse link
G Krt82 keratin 82 located_in
is_active_in
ISO
IBA
(PMID:10692104)
GO_REF:0000033
RGD
GO_Central
PMID:10692104 GO_REF:0000033 NCBI chr 7:132,665,506...132,675,362 JBrowse link
G Krt83 keratin 83 is_active_in TAS
IBA
GO_REF:0000033 GO_Central
RGD
PMID:15085952 GO_REF:0000033, RGD:1303986 NCBI chr 7:132,604,180...132,610,869 JBrowse link
G Krt84 keratin 84 located_in
is_active_in
ISO
IBA
(PMID:10692104)
GO_REF:0000033
RGD
GO_Central
PMID:10692104 GO_REF:0000033 NCBI chr 7:134,527,787...134,535,608 JBrowse link
G Krt85 keratin 85 is_active_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr 7:132,630,184...132,637,061 JBrowse link
G Krt86 keratin 86 is_active_in
located_in
IBA
ISO
GO_REF:0000033
(PMID:32296183)
GO_Central
RGD
PMID:32296183 GO_REF:0000033 NCBI chr 7:132,591,489...132,598,142 JBrowse link
G Krt87 keratin 87 is_active_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr 7:132,547,388...132,555,005 JBrowse link
G Krt9 keratin 9 is_active_in IDA
IBA
GO_REF:0000033 GO_Central
RGD
PMID:11071770 GO_REF:0000033, RGD:633128 NCBI chr10:85,120,962...85,127,228 JBrowse link
G Krt90 keratin 90 is_active_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr 7:132,677,994...132,686,634 JBrowse link
G Krtap1-1 keratin associated protein 1-1 located_in IEA GO_REF:0000002 InterPro GO_REF:0000002 NCBI chr10:84,545,765...84,546,331 JBrowse link
G Krtap1-3 keratin associated protein 1-3 located_in IEA GO_REF:0000002 InterPro GO_REF:0000002 NCBI chr10:84,552,873...84,553,394 JBrowse link
G Krtap1-5 keratin associated protein 1-5 located_in IEA GO_REF:0000002 InterPro GO_REF:0000002 NCBI chr10:84,543,288...84,543,711 JBrowse link
G Krtap1-5l1 keratin associated protein 1-5 like 1 located_in IEA GO_REF:0000002 InterPro GO_REF:0000002 NCBI chr10:84,559,521...84,559,916 JBrowse link
G Krtap10-1 keratin associated protein 10-1 located_in IEA GO_REF:0000002 InterPro GO_REF:0000002 NCBI chr20:10,880,524...10,881,445 JBrowse link
G Krtap10-10 keratin associated protein 10-10 located_in IEA GO_REF:0000002 InterPro GO_REF:0000002 NCBI chr20:10,854,951...10,864,402 JBrowse link
G Krtap10-10l2 keratin associated protein 10-10 like 2 located_in IEA GO_REF:0000002 InterPro GO_REF:0000002 NCBI chr20:10,845,110...10,846,261 JBrowse link
G Krtap10-8l1 keratin associated protein 10-8 like 1 located_in IEA GO_REF:0000002 InterPro GO_REF:0000002 NCBI chr20:10,799,355...10,800,215 JBrowse link
G Krtap10-9 keratin associated protein 10-9 located_in IEA GO_REF:0000002 InterPro GO_REF:0000002 NCBI chr20:10,939,609...10,940,526 JBrowse link
G Krtap11-1 keratin associated protein 11-1 located_in IEA GO_REF:0000104 UniProt GO_REF:0000104 NCBI chr11:28,809,940...28,810,944 JBrowse link
G Krtap13 keratin associated protein 13 located_in IEA GO_REF:0000104 UniProt GO_REF:0000104 NCBI chr11:28,074,833...28,075,375 JBrowse link
G Krtap13-1 keratin associated protein 13-1 located_in IEA GO_REF:0000104 UniProt GO_REF:0000104 NCBI chr11:28,043,194...28,044,666 JBrowse link
G Krtap13-1l1 keratin associated protein 13-1 like 1 located_in IEA GO_REF:0000104 UniProt GO_REF:0000104 NCBI chr11:28,023,548...28,024,726 JBrowse link
G Krtap13-2 keratin associated protein 13-2 located_in IEA GO_REF:0000104 UniProt GO_REF:0000104 NCBI chr11:28,089,681...28,090,825 JBrowse link
G Krtap14 keratin associated protein 14 located_in IEA GO_REF:0000104 UniProt GO_REF:0000104 NCBI chr11:28,126,660...28,127,502 JBrowse link
G Krtap14l keratin associated protein 14 like located_in IEA GO_REF:0000104 UniProt GO_REF:0000104 NCBI chr11:28,085,729...28,086,516 JBrowse link
G Krtap16-1 keratin associated protein 16-1 located_in IEA GO_REF:0000002 InterPro GO_REF:0000002 NCBI chr10:84,915,116...84,916,984 JBrowse link
G Krtap2-1 keratin associated protein 2-1 located_in IEA GO_REF:0000002 InterPro GO_REF:0000002 NCBI chr10:84,572,164...84,572,587 JBrowse link
G Krtap2-4 keratin associated protein 2-4 located_in IEA GO_REF:0000002 InterPro GO_REF:0000002 NCBI chr10:84,577,953...84,578,426 JBrowse link
G Krtap2-4l1 keratin associated protein 2-4-like 1 located_in IEA GO_REF:0000002 InterPro GO_REF:0000002 NCBI chr10:84,563,950...84,564,373 JBrowse link
G Krtap2-4l2 keratin associated protein 2-4 like 2 located_in IEA GO_REF:0000002 InterPro GO_REF:0000002 NCBI chr10:84,584,364...84,585,548 JBrowse link
G Krtap24-1 keratin associated protein 24-1 located_in IEA GO_REF:0000104 UniProt GO_REF:0000104 NCBI chr11:27,932,015...27,936,047 JBrowse link
G Krtap26-1 keratin associated protein 26-1 located_in IEA GO_REF:0000104 UniProt GO_REF:0000104 NCBI chr11:27,965,033...27,965,728 JBrowse link
G Krtap3-1 keratin associated protein 3-1 located_in IEA GO_REF:0000002 InterPro GO_REF:0000002 NCBI chr10:84,527,698...84,527,994 JBrowse link
G Krtap3-2 keratin associated protein 3-2 located_in IEA GO_REF:0000002 InterPro GO_REF:0000002 NCBI chr10:84,518,634...84,518,964 JBrowse link
G Krtap3-3 keratin associated protein 3-3 located_in IEA GO_REF:0000002 InterPro GO_REF:0000002 NCBI chr10:84,511,459...84,511,758 JBrowse link
G Krtap31-1 keratin associated protein 31-1 located_in IEA GO_REF:0000002 InterPro GO_REF:0000002 NCBI chr10:84,863,050...84,863,982 JBrowse link
G Krtap31-2 keratin associated protein 31-2 located_in IEA GO_REF:0000002 InterPro GO_REF:0000002 NCBI chr10:84,849,920...84,850,903 JBrowse link
G Krtap9-5l keratin associated protein 9-5 like located_in IEA GO_REF:0000002 InterPro GO_REF:0000002 NCBI chr10:84,877,098...84,880,040 JBrowse link
G Krtap9-7 keratin associated protein 9-7 located_in IEA GO_REF:0000002 InterPro GO_REF:0000002 NCBI chr10:84,813,754...84,814,326 JBrowse link
G LOC100363236 keratin associated protein 13-like located_in IEA GO_REF:0000104 UniProt GO_REF:0000104 NCBI chr11:28,068,529...28,069,300 JBrowse link
G LOC100365213 keratin 6A-like is_active_in IBA GO_REF:0000033 GO_Central GO_REF:0000033
G LOC100909494 keratin-associated protein 4-7-like located_in IEA GO_REF:0000002 InterPro GO_REF:0000002 NCBI chr10:84,745,499...84,746,100 JBrowse link
G LOC100910814 keratin-associated protein 9-1-like located_in IEA GO_REF:0000002 InterPro GO_REF:0000002 NCBI chr10:84,819,652...84,820,206 JBrowse link
G LOC100912272 keratin-associated protein 26-1-like located_in IEA GO_REF:0000104 UniProt GO_REF:0000104 NCBI chr11:27,947,429...27,949,456 JBrowse link
G LOC102553726 keratin, type II cytoskeletal 6A-like is_active_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr 7:132,787,470...132,791,649 JBrowse link
G LOC103693537 keratin-associated protein 13-1-like located_in IEA GO_REF:0000104 UniProt GO_REF:0000104 NCBI chr11:28,112,386...28,112,985 JBrowse link
G LOC120093742 keratin, type II cytoskeletal 6A-like is_active_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr 7:132,813,038...132,817,010 JBrowse link
G LOC120095334 keratin-associated protein 3-1-like located_in IEA GO_REF:0000002 InterPro GO_REF:0000002 NCBI chr10:84,521,216...84,521,515 JBrowse link
G LOC120098854 keratin-associated protein 10-1-like located_in IEA GO_REF:0000002 InterPro GO_REF:0000002 NCBI chr20:10,835,079...10,835,882 JBrowse link
G LOC120098855 keratin-associated protein 10-11-like located_in IEA GO_REF:0000002 InterPro GO_REF:0000002 NCBI chr20:10,840,914...10,841,681 JBrowse link
G LOC134478810 keratin-associated protein 4-3-like located_in IEA GO_REF:0000002 InterPro GO_REF:0000002
G Tchp trichoplein, keratin filament binding located_in
is_active_in
ISO
IBA
(PMID:15731013)
(PMID:21325031)
GO_REF:0000033
RGD
GO_Central
PMID:15731013 PMID:21325031 GO_REF:0000033 NCBI chr12:41,877,888...41,893,264 JBrowse link
lamin filament term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Eif6 eukaryotic translation initiation factor 6 located_in ISO (PMID:9374518) RGD PMID:9374518 NCBI chr 3:144,325,038...144,331,396 JBrowse link
G Lmna lamin A/C located_in IEA
ISO
GO_REF:0000107
(PMID:8032679)
Ensembl
RGD
PMID:8032679 GO_REF:0000107 NCBI chr 2:176,237,564...176,265,301 JBrowse link
G Lmnb1 lamin B1 located_in IEA
ISO
GO_REF:0000107
(PMID:8032679)
Ensembl
RGD
PMID:8032679 GO_REF:0000107 NCBI chr18:52,373,939...52,413,284 JBrowse link
G Lmnb2 lamin B2 located_in ISO (PMID:8032679) RGD PMID:8032679 NCBI chr 7:8,792,628...8,808,665 JBrowse link
G Lmntd2 lamin tail domain containing 2 is_active_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr 1:196,315,112...196,320,880 JBrowse link
G Narf nuclear prelamin A recognition factor located_in
is_active_in
ISO
IBA
IEA
(PMID:10514485)
GO_REF:0000033
GO_REF:0000107
RGD
GO_Central
Ensembl
PMID:10514485 GO_REF:0000033 GO_REF:0000107 NCBI chr10:106,519,508...106,537,494 JBrowse link
neurofilament term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Cldn11 claudin 11 located_in ISO
IEA
(PMID:30734065)
GO_REF:0000107
RGD
Ensembl
PMID:30734065 GO_REF:0000107 NCBI chr 2:112,207,745...112,221,050 JBrowse link
G Dlgap2 DLG associated protein 2 located_in NAS PMID:9286858 UniProt PMID:9286858 RGD:8554678 NCBI chr16:81,489,059...82,198,693 JBrowse link
G Dmd dystrophin IDA RGD PMID:11326752 RGD:12880030 NCBI chr  X:51,070,098...53,437,845 JBrowse link
G Dyrk1a dual specificity tyrosine phosphorylation regulated kinase 1A located_in ISO UniProtKB:P12036 (PMID:24327345) RGD PMID:24327345 NCBI chr11:47,360,824...47,479,033 JBrowse link
G Htr2a 5-hydroxytryptamine receptor 2A located_in IDA RGD PMID:19362128 RGD:401938622 NCBI chr15:56,360,647...56,428,703 JBrowse link
G Ina internexin neuronal intermediate filament protein, alpha located_in IEA
ISO
GO_REF:0000107
(PMID:10221457)
Ensembl
RGD
PMID:10221457 GO_REF:0000107 NCBI chr 1:255,838,129...255,849,680 JBrowse link
G Ldlrap1 low density lipoprotein receptor adaptor protein 1 located_in IEA
ISO
GO_REF:0000107
(PMID:17727637)
Ensembl
RGD
PMID:17727637 GO_REF:0000107 NCBI chr 5:152,239,296...152,262,290 JBrowse link
G Nefh neurofilament heavy chain located_in
is_active_in
ISO
IBA
(PMID:8634266)
(PMID:10221457), (PMID:15248193), (PMID:20176735)
GO_REF:0000033
RGD
GO_Central
PMID:8634266 PMID:10221457 PMID:15248193 PMID:20176735 GO_REF:0000033 NCBI chr14:84,044,428...84,054,413 JBrowse link
G Nefl neurofilament light chain located_in IDA
ISO
(PMID:10221457), (PMID:15242779), (PMID:8821035)
(PMID:3920075), (PMID:8634266)
(PMID:15857389)
RGD PMID:3920075 PMID:8634266 PMID:8821035 PMID:10221457 PMID:15242779 More... RGD:9743935 NCBI chr15:46,477,330...46,481,203 JBrowse link
G Nefm neurofilament medium chain located_in IDA
ISO
(PMID:10221457), (PMID:10482234), (PMID:12971893), (PMID:15248193) RGD PMID:10221457 PMID:10482234 PMID:12971893 PMID:15248193 PMID:7721944 RGD:9743935 NCBI chr15:46,535,857...46,541,161 JBrowse link
G Nrp1 neuropilin 1 located_in ISO (PMID:15814794) RGD PMID:15814794 NCBI chr19:73,256,557...73,411,705 JBrowse link
G Pcp4 Purkinje cell protein 4 IDA RGD PMID:10556647 RGD:9850249 NCBI chr11:35,759,711...35,861,725 JBrowse link
G Prph peripherin located_in ISO (PMID:10221457) RGD PMID:10221457 NCBI chr 7:132,096,888...132,101,070 JBrowse link
G Shank2 SH3 and multiple ankyrin repeat domains 2 located_in ISS
ISO
GO_REF:0000024
(PMID:19299912)
BHF-UCL
RGD
PMID:19299912 GO_REF:0000024 NCBI chr 1:208,575,144...209,020,300 JBrowse link
type III intermediate filament term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Des desmin IDA RGD PMID:12529857 RGD:1580288 NCBI chr 9:84,299,626...84,307,344 JBrowse link
G Dst dystonin is_active_in ISO (PMID:19932097) RGD PMID:19932097 NCBI chr 9:36,135,657...36,529,617 JBrowse link
G Prph peripherin is_active_in IDA
IBA
GO_REF:0000033 GO_Central
RGD
PMID:2624740 GO_REF:0000033, RGD:633741 NCBI chr 7:132,096,888...132,101,070 JBrowse link
G Upp2 uridine phosphorylase 2 located_in ISO (PMID:11278417) RGD PMID:11278417 NCBI chr 3:43,273,048...43,317,417 JBrowse link
G Vim vimentin TAS RGD PMID:1540169 RGD:730086 NCBI chr17:81,577,261...81,585,746 JBrowse link
G Vmac vimentin-type intermediate filament associated coiled-coil protein is_active_in IDA
IBA
GO_REF:0000033 GO_Central
RGD
PMID:14985129 GO_REF:0000033, RGD:1303975 NCBI chr 9:1,546,747...1,550,417 JBrowse link

Term paths to the root
Path 1
Term Annotations click to browse term
  cellular_component 21321
    cellular anatomical structure 21026
      supramolecular complex 1407
        supramolecular polymer 1043
          supramolecular fiber 1036
            polymeric cytoskeletal fiber 775
              intermediate filament 177
                glial filament 1
                keratin filament 92
                lamin filament 6
                neurofilament 14
                type III intermediate filament 6
Path 2
Term Annotations click to browse term
  cellular_component 21321
    cellular anatomical structure 21026
      organelle 14240
        membraneless organelle 5379
          intracellular membraneless organelle 5379
            cytoskeleton 2464
              intermediate filament cytoskeleton 210
                intermediate filament 177
                  glial filament 1
                  keratin filament 92
                  lamin filament 6
                  neurofilament 14
                  type III intermediate filament 6
paths to the root