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ONTOLOGY REPORT - ANNOTATIONS

Term:Golgi lumen
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Accession:GO:0005796 term browser browse the term
Definition:The volume enclosed by the membranes of any cisterna or subcompartment of the Golgi apparatus, including the cis- and trans-Golgi networks.
Synonyms:exact_synonym: Golgi apparatus lumen


show annotations for term's descendants           Sort by:
Golgi lumen term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Abcc5 ATP binding cassette subfamily C member 5 located_in IEA GO_REF:0000044 UniProt GO_REF:0000044 NCBI chr11:80,473,809...80,567,257
Ensembl chr11:80,473,872...80,567,253 		JBrowse link
G Agrp agouti related neuropeptide located_in ISO (PMID:15927146) RGD PMID:15927146 NCBI chr19:33,447,992...33,481,602
Ensembl chr19:33,447,992...33,449,584 		JBrowse link
G B3gat1 beta-1,3-glucuronyltransferase 1 TAS RGD PMID:9804790 RGD:724602 NCBI chr 8:25,087,123...25,114,692
Ensembl chr 8:25,087,547...25,113,395 		JBrowse link
G Ero1a endoplasmic reticulum oxidoreductase 1 alpha located_in ISS
ISO
IEA		 GO_REF:0000024
(PMID:29858230)
GO_REF:0000044		 UniProt
RGD		 PMID:29858230 GO_REF:0000024 GO_REF:0000044 NCBI chr15:18,495,037...18,530,440
Ensembl chr15:18,492,945...18,530,478 		JBrowse link
G Furin furin (paired basic amino acid cleaving enzyme) is_active_in ISO (PMID:7499343) RGD PMID:7499343 NCBI chr 1:134,348,142...134,361,182
Ensembl chr 1:134,348,144...134,364,314 		JBrowse link
G Hs3st1 heparan sulfate-glucosamine 3-sulfotransferase 1 located_in IEA GO_REF:0000044 UniProt GO_REF:0000044 NCBI chr14:71,185,826...71,223,263
Ensembl chr14:71,185,682...71,223,248 		JBrowse link
G Lrpap1 LDL receptor related protein associated protein 1 located_in IEA GO_REF:0000044 UniProt GO_REF:0000044 NCBI chr14:75,651,371...75,663,380
Ensembl chr14:75,651,376...75,665,414 		JBrowse link
G Ngf nerve growth factor located_in TAS Reactome:R-RNO-188325
Reactome:R-RNO-194339		 Reactome Reactome:R-RNO-188325 Reactome:R-RNO-194339 NCBI chr 2:189,901,058...189,954,452
Ensembl chr 2:189,901,058...189,954,452 		JBrowse link
G Rab33b RAB33B, member RAS oncogene family located_in ISO (PMID:18448665) RGD PMID:18448665 NCBI chr 2:135,528,116...135,538,719
Ensembl chr 2:135,528,116...135,538,719 		JBrowse link
G Sdf4 stromal cell derived factor 4 located_in IEA
ISS
ISO		 GO_REF:0000044
GO_REF:0000024
(PMID:8609160)		 UniProt
BHF-UCL
RGD		 PMID:8609160 GO_REF:0000024 GO_REF:0000044 NCBI chr 5:166,586,581...166,606,661
Ensembl chr 5:166,586,390...166,604,521 		JBrowse link
G Tpst1 tyrosylprotein sulfotransferase 1 is_active_in ISO (PMID:3121635) RGD PMID:3121635 NCBI chr12:26,544,536...26,605,706
Ensembl chr12:26,544,536...26,605,704 		JBrowse link
G Tpst2 tyrosylprotein sulfotransferase 2 is_active_in ISO (PMID:20011239), (PMID:3121635) RGD PMID:3121635 PMID:20011239 NCBI chr12:44,321,875...44,363,892
Ensembl chr12:44,321,875...44,362,329 		JBrowse link
G Vtn vitronectin IDA RGD PMID:10192552 RGD:10003091 NCBI chr10:63,394,732...63,397,812
Ensembl chr10:63,394,719...63,397,810 		JBrowse link
G Zg16 zymogen granule protein 16 located_in ISO
ISS		 (PMID:17307141)
GO_REF:0000024		 RGD
UniProt		 PMID:17307141 GO_REF:0000024 NCBI chr 1:181,657,722...181,660,079
Ensembl chr 1:181,657,722...181,660,079 		JBrowse link
Term paths to the root
Path 1
Term Annotations click to browse term
  cellular_component 20832
    cellular anatomical structure 20632
      endomembrane system 4342
        Golgi apparatus 1445
          Golgi lumen 14
            Golgi stack lumen 0
            trans-Golgi network transport vesicle lumen 0
Path 2
Term Annotations click to browse term
  cellular_component 20832
    cellular anatomical structure 20632
      intracellular anatomical structure 15188
        intracellular organelle 13568
          intracellular membrane-bounded organelle 12009
            Golgi apparatus 1445
              Golgi lumen 14
                Golgi stack lumen 0
                trans-Golgi network transport vesicle lumen 0
paths to the root