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ONTOLOGY REPORT - ANNOTATIONS


Term:late endosome
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Accession:GO:0005770 term browser browse the term
Definition:A prelysosomal endocytic organelle differentiated from early endosomes by lower lumenal pH and different protein composition. Late endosomes are more spherical than early endosomes and are mostly juxtanuclear, being concentrated near the microtubule organizing center.
Synonyms:exact_synonym: prevacuolar compartment
 broad_synonym: PVC
 xref: NIF_Subcellular:nlx_subcell_20090702



show annotations for term's descendants           Sort by:
late endosome term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Abca3 ATP binding cassette subfamily A member 3 located_in ISO
ISS
(PMID:27177387)
GO_REF:0000024
RGD
UniProt
PMID:27177387 GO_REF:0000024 NCBI chr10:13,886,948...13,944,286 JBrowse link
G Abca5 ATP binding cassette subfamily A member 5 is_active_in
located_in
IBA
ISO
GO_REF:0000033
(PMID:15870284)
GO_Central
RGD
PMID:15870284 GO_REF:0000033 NCBI chr10:95,739,610...95,808,633 JBrowse link
G Ankrd13a ankyrin repeat domain 13a located_in ISO (PMID:22298428) RGD PMID:22298428 NCBI chr12:41,798,196...41,828,327 JBrowse link
G Ankrd13b ankyrin repeat domain 13B located_in ISO (PMID:22298428) RGD PMID:22298428 NCBI chr10:62,319,660...62,338,342 JBrowse link
G Ankrd13d ankyrin repeat domain 13D located_in IEA GO_REF:0000044 UniProt GO_REF:0000044 NCBI chr 1:201,565,712...201,577,987 JBrowse link
G Ankrd27 ankyrin repeat domain 27 located_in
is_active_in
ISO
IBA
(PMID:24856514)
GO_REF:0000033
RGD
GO_Central
PMID:24856514 GO_REF:0000033 NCBI chr 1:88,251,216...88,303,615 JBrowse link
G Ap5m1 adaptor related protein complex 5 subunit mu 1 located_in
is_active_in
ISO
IBA
ISS
(PMID:22022230)
GO_REF:0000033
GO_REF:0000024
RGD
GO_Central
UniProt
PMID:22022230 GO_REF:0000024 GO_REF:0000033 NCBI chr15:22,355,478...22,385,222 JBrowse link
G Ap5s1 adaptor related protein complex 5 subunit sigma 1 located_in
is_active_in
ISO
IBA
(PMID:22022230)
GO_REF:0000033
RGD
GO_Central
PMID:22022230 GO_REF:0000033 NCBI chr 3:118,429,618...118,432,929 JBrowse link
G Apoa5 apolipoprotein A5 located_in IEA GO_REF:0000044 UniProt GO_REF:0000044 NCBI chr 8:46,561,180...46,563,818 JBrowse link
G Apoe apolipoprotein E IDA RGD PMID:7806565 RGD:1626382 NCBI chr 1:88,481,889...88,485,816 JBrowse link
G Arf1 ARF GTPase 1 IDA RGD PMID:21421027 RGD:9684860 NCBI chr10:44,497,543...44,513,994 JBrowse link
G Atg9a autophagy related 9A located_in IDA
ISO
(PMID:22456507) RGD PMID:22456507 PMID:16940348 RGD:4889884 NCBI chr 9:76,677,403...76,688,050 JBrowse link
G Atp13a2 ATPase cation transporting 13A2 located_in ISO (PMID:25392495) RGD PMID:25392495 NCBI chr 5:153,292,722...153,312,143 JBrowse link
G Atp7a ATPase copper transporting alpha located_in IDA
ISO
(PMID:8943055) RGD PMID:8943055 PMID:16741141 RGD:1599391 NCBI chr  X:75,159,635...75,267,094 JBrowse link
G Atp7b ATPase copper transporting beta located_in IDA
ISO
IEA
(PMID:15681833)
GO_REF:0000107
RGD
Ensembl
PMID:15681833 PMID:16741141 GO_REF:0000107, RGD:1599391 NCBI chr16:76,654,725...76,726,092 JBrowse link
G Atp9a ATPase phospholipid transporting 9A (putative) located_in ISO (PMID:36604604) RGD PMID:36604604 NCBI chr 3:157,360,354...157,467,628 JBrowse link
G Bace1 beta-secretase 1 located_in ISO
IEA
ISS
(PMID:16033761), (PMID:23109336), (PMID:24612608), (PMID:27084579), (PMID:27302062)
GO_REF:0000044
GO_REF:0000024
RGD
UniProt
PMID:16033761 PMID:23109336 PMID:24612608 PMID:27084579 PMID:27302062 GO_REF:0000024 GO_REF:0000044 NCBI chr 8:55,038,842...55,061,138 JBrowse link
G Bltp3a bridge-like lipid transfer protein family member 3A located_in ISO (PMID:35499567) RGD PMID:35499567 NCBI chr20:5,910,261...5,954,641 JBrowse link
G Cd1d1 CD1d1 molecule located_in ISO (PMID:11754812) RGD PMID:11754812 NCBI chr 2:172,423,582...172,427,089 JBrowse link
G Cd2ap CD2-associated protein located_in
is_active_in
IEA
ISO
GO_REF:0000107
(PMID:15956777)
Ensembl
RGD
PMID:15956777 GO_REF:0000107 NCBI chr 9:18,086,744...18,182,744 JBrowse link
G Cd63 Cd63 molecule located_in ISO (PMID:14668490), (PMID:27435297) RGD PMID:14668490 PMID:27435297 NCBI chr 7:1,909,538...1,924,937 JBrowse link
G Cd74 CD74 molecule located_in ISS
ISO
GO_REF:0000024
(PMID:11483509)
(PMID:15294975)
UniProt
RGD
PMID:11483509 PMID:15294975 GO_REF:0000024 NCBI chr18:54,256,757...54,266,003 JBrowse link
G Chid1 chitinase domain containing 1 located_in ISO
IEA
(PMID:16357325)
GO_REF:0000107
RGD
Ensembl
PMID:16357325 GO_REF:0000107 NCBI chr 1:196,594,357...196,629,700 JBrowse link
G Chmp2b charged multivesicular body protein 2B located_in ISO (PMID:16041373) RGD PMID:16041373 NCBI chr11:3,337,478...3,364,015 JBrowse link
G Chmp3 charged multivesicular body protein 3 located_in IDA
ISO
(PMID:16554368) RGD PMID:16554368 PMID:18076377 RGD:4892661 NCBI chr 4:103,576,453...103,622,566 JBrowse link
G Clcn3 chloride voltage-gated channel 3 located_in ISS
ISO
GO_REF:0000024
(PMID:12471024)
UniProt
RGD
PMID:12471024 GO_REF:0000024 NCBI chr16:29,127,152...29,200,133 JBrowse link
G Clec16a C-type lectin domain containing 16A located_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr10:5,434,725...5,631,246 JBrowse link
G Cln3 CLN3 lysosomal/endosomal transmembrane protein, battenin located_in ISO (PMID:10332042), (PMID:15471887), (PMID:22261744), (PMID:23840424)
(PMID:15588329)
RGD PMID:10332042 PMID:15471887 PMID:15588329 PMID:22261744 PMID:23840424 NCBI chr 1:181,156,071...181,169,458 JBrowse link
G Cst7 cystatin F is_active_in
located_in
IBA
ISO
GO_REF:0000033
(PMID:15212960)
GO_Central
RGD
PMID:15212960 GO_REF:0000033 NCBI chr 3:139,396,830...139,405,557 JBrowse link
G Ctns cystinosin, lysosomal cystine transporter located_in ISO (PMID:15128704) RGD PMID:15128704 NCBI chr10:58,300,069...58,315,725 JBrowse link
G Ctss cathepsin S located_in ISO
IEA
(PMID:22365146)
GO_REF:0000107
RGD
Ensembl
PMID:22365146 GO_REF:0000107 NCBI chr 2:185,775,316...185,803,440 JBrowse link
G Cxcr4 C-X-C motif chemokine receptor 4 located_in ISO
ISS
(PMID:21540189)
GO_REF:0000024
RGD
UniProt
PMID:21540189 GO_REF:0000024 NCBI chr13:42,630,383...42,634,288 JBrowse link
G Ddit3 DNA-damage inducible transcript 3 located_in ISO (PMID:23028046) RGD PMID:23028046 NCBI chr 7:65,001,695...65,006,517 JBrowse link
G Dennd10 DENN domain containing 10 located_in
is_active_in
ISO
IBA
(PMID:30771381)
GO_REF:0000033
RGD
GO_Central
PMID:30771381 GO_REF:0000033 NCBI chr 1:259,950,955...259,974,459 JBrowse link
G Derl1 derlin 1 located_in ISO (PMID:19509052) RGD PMID:19509052 NCBI chr 7:89,404,413...89,427,095 JBrowse link
G Derl2 derlin 2 located_in ISO (PMID:19509052) RGD PMID:19509052 NCBI chr10:55,727,764...55,739,442 JBrowse link
G Dync1li1 dynein cytoplasmic 1 light intermediate chain 1 located_in IDA RGD PMID:21169557 RGD:13207422 NCBI chr 8:123,254,823...123,288,496 JBrowse link
G Dync1li2 dynein, cytoplasmic 1 light intermediate chain 2 located_in IDA RGD PMID:21169557 RGD:13207422 NCBI chr19:538,207...561,110 JBrowse link
G Dysf dysferlin located_in ISO (PMID:20595382) RGD PMID:20595382 NCBI chr 4:116,490,877...116,690,709 JBrowse link
G Ecpas Ecm29 proteasome adaptor and scaffold located_in ISO (PMID:15496406) RGD PMID:15496406 NCBI chr 5:73,601,745...73,714,026 JBrowse link
G Elapor1 endosome-lysosome associated apoptosis and autophagy regulator 1 located_in ISO
IBA
(PMID:21072319)
GO_REF:0000033
RGD
GO_Central
PMID:21072319 GO_REF:0000033 NCBI chr 2:198,777,323...198,856,497 JBrowse link
G ENSRNOG00000067941 located_in IEA GO_REF:0000117 UniProt GO_REF:0000117
G Exoc8 exocyst complex component 8 located_in ISO (PMID:24344185) RGD PMID:24344185 NCBI chr19:69,752,387...69,754,876 JBrowse link
G F2r coagulation factor II (thrombin) receptor located_in IEA
ISO
GO_REF:0000107
(PMID:24732013)
Ensembl
RGD
PMID:24732013 GO_REF:0000107 NCBI chr 2:26,869,343...26,885,856 JBrowse link
G Fyco1 FYVE and coiled-coil domain autophagy adaptor 1 located_in
is_active_in
ISO
IBA
(PMID:20100911)
GO_REF:0000033
RGD
GO_Central
PMID:20100911 GO_REF:0000033 NCBI chr 8:132,289,538...132,356,810 JBrowse link
G Gja1 gap junction protein, alpha 1 IDA RGD PMID:16162097 RGD:1582681 NCBI chr20:36,302,490...36,315,010 JBrowse link
G Gnpnat1 glucosamine-phosphate N-acetyltransferase 1 located_in ISO (PMID:10777580) RGD PMID:10777580 NCBI chr15:18,596,180...18,608,854 JBrowse link
G Grin2b glutamate ionotropic receptor NMDA type subunit 2B located_in ISS
ISO
GO_REF:0000024
(PMID:31424425)
UniProt
RGD
PMID:31424425 GO_REF:0000024 NCBI chr 4:170,297,811...170,775,420 JBrowse link
G Grn granulin precursor located_in IEA
ISS
ISO
GO_REF:0000107
GO_REF:0000024
(PMID:26370502)
Ensembl
UniProt
RGD
PMID:26370502 GO_REF:0000024 GO_REF:0000107 NCBI chr10:87,387,672...87,393,777 JBrowse link
G Hap1 huntingtin-associated protein 1 TAS RGD PMID:12021262 RGD:625566 NCBI chr10:85,778,267...85,786,553 JBrowse link
G Haus8l2 HAUS augmin-like complex, subunit 8 like 2 located_in IEA GO_REF:0000107 Ensembl GO_REF:0000107 NCBI chr11:5,628,432...5,630,535 JBrowse link
G Hspa8 heat shock protein family A (Hsp70) member 8 located_in IEA
ISO
GO_REF:0000107
(PMID:21238931)
Ensembl
RGD
PMID:21238931 GO_REF:0000107 NCBI chr 8:50,080,514...50,084,376 JBrowse link
G Htt huntingtin located_in ISO
IEA
(PMID:17704510)
GO_REF:0000107
RGD
Ensembl
PMID:17704510 GO_REF:0000107 NCBI chr14:75,845,836...75,996,094 JBrowse link
G Igf2r insulin-like growth factor 2 receptor is_active_in
located_in
IDA
IBA
ISO
GO_REF:0000033
(PMID:22456507)
GO_Central
RGD
PMID:22456507 PMID:19337031 GO_REF:0000033, RGD:4892338 NCBI chr 1:50,526,878...50,615,265 JBrowse link
G Insr insulin receptor located_in IEA GO_REF:0000044 UniProt GO_REF:0000044 NCBI chr12:5,991,135...6,129,275 JBrowse link
G Irgm immunity-related GTPase M located_in ISO (PMID:16888103), (PMID:20072621) RGD PMID:16888103 PMID:20072621 NCBI chr10:33,233,513...33,241,594 JBrowse link
G Kcmf1 potassium channel modulatory factor 1 located_in IEA GO_REF:0000044 UniProt GO_REF:0000044 NCBI chr 4:106,447,974...106,508,359 JBrowse link
G Kcnq1 potassium voltage-gated channel subfamily Q member 1 located_in IEA
ISO
GO_REF:0000107
(PMID:21957902)
Ensembl
RGD
PMID:21957902 GO_REF:0000107 NCBI chr 1:207,721,134...208,054,073 JBrowse link
G Kidins220 kinase D-interacting substrate 220 located_in IDA PMID:17724123 UniProt PMID:17724123 RGD:8554481 NCBI chr 6:47,346,790...47,435,599 JBrowse link
G Lamp1 lysosomal-associated membrane protein 1 located_in ISO (PMID:15052268), (PMID:15292400), (PMID:15792797), (PMID:16542649), (PMID:18388320), (PMID:18767904)
(PMID:12446704), (PMID:14668490), (PMID:15294975), (PMID:16415873), (PMID:17620357), (PMID:18477453), (PMID:24841562)
RGD PMID:12446704 PMID:14668490 PMID:15052268 PMID:15292400 PMID:15294975 More... NCBI chr16:83,058,131...83,082,843 JBrowse link
G Lamp2 lysosomal-associated membrane protein 2 located_in ISO (PMID:15229288)
(PMID:14668490)
RGD PMID:14668490 PMID:15229288 NCBI chr  X:122,038,734...122,087,745 JBrowse link
G Lamp5 lysosomal-associated membrane protein family, member 5 located_in ISO (PMID:25592972) RGD PMID:25592972 NCBI chr 3:123,372,462...123,384,973 JBrowse link
G Lamtor2 late endosomal/lysosomal adaptor, MAPK and MTOR activator 2 located_in ISO (PMID:15263099), (PMID:19177150), (PMID:24841562) RGD PMID:15263099 PMID:19177150 PMID:24841562 NCBI chr 2:174,008,556...174,011,950 JBrowse link
G Lamtor3 late endosomal/lysosomal adaptor, MAPK and MTOR activator 3 is_active_in
located_in
ISO PR:Q9JKF1 (PMID:24841562)
(PMID:15263099), (PMID:19177150), (PMID:24841562)
RGD PMID:15263099 PMID:19177150 PMID:24841562 NCBI chr 2:226,411,389...226,423,612 JBrowse link
G Ldlr low density lipoprotein receptor located_in ISO
IEA
ISS
(PMID:17461796)
(PMID:11092755)
GO_REF:0000107
GO_REF:0000024
RGD
Ensembl
UniProt
PMID:11092755 PMID:17461796 GO_REF:0000024 GO_REF:0000107 NCBI chr 8:20,270,020...20,292,981 JBrowse link
G Lgmn legumain located_in ISO
IEA
(PMID:12775715)
GO_REF:0000107
RGD
Ensembl
PMID:12775715 GO_REF:0000107 NCBI chr 6:121,544,048...121,582,495 JBrowse link
G Lipc lipase C, hepatic type IDA RGD PMID:14701798 RGD:1625029 NCBI chr 8:71,509,633...71,635,663 JBrowse link
G M6pr mannose-6-phosphate receptor, cation dependent located_in ISO (PMID:12388596) RGD PMID:12388596 NCBI chr 4:155,501,080...155,510,219 JBrowse link
G Magi2 membrane associated guanylate kinase, WW and PDZ domain containing 2 located_in IDA PMID:17724123 UniProt PMID:17724123 RGD:8554481 NCBI chr 4:14,386,389...15,870,036 JBrowse link
G Map1lc3a microtubule-associated protein 1 light chain 3 alpha IDA RGD PMID:19337031 RGD:4892338 NCBI chr 3:164,243,204...164,244,850 JBrowse link
G Map2k1 mitogen activated protein kinase kinase 1 located_in TAS
IEA
PMID:19565474
GO_REF:0000117
UniProt PMID:19565474 GO_REF:0000117, RGD:8553538 NCBI chr 8:73,578,747...73,650,184 JBrowse link
G Map2k2 mitogen activated protein kinase kinase 2 located_in TAS
IEA
PMID:19565474
GO_REF:0000117
UniProt PMID:19565474 GO_REF:0000117, RGD:8553538 NCBI chr 7:9,241,449...9,264,216 JBrowse link
G Mapk1 mitogen activated protein kinase 1 located_in TAS
IEA
PMID:19565474
GO_REF:0000117
UniProt PMID:19565474 GO_REF:0000117, RGD:8553538 NCBI chr11:97,462,025...97,529,193 JBrowse link
G Mapk3 mitogen activated protein kinase 3 located_in TAS
IEA
PMID:19565474
GO_REF:0000117
UniProt PMID:19565474 GO_REF:0000117, RGD:8553538 NCBI chr 1:190,797,189...190,803,411 JBrowse link
G Mapkap1 MAPK associated protein 1 is_active_in ISO
ISS
(PMID:28143890)
GO_REF:0000024
RGD
UniProt
PMID:28143890 GO_REF:0000024 NCBI chr 3:38,113,268...38,315,913 JBrowse link
G Mcoln1 mucolipin TRP cation channel 1 located_in ISO (PMID:21224396) RGD PMID:21224396 NCBI chr12:1,560,341...1,574,252 JBrowse link
G Mfsd12 major facilitator superfamily domain containing 12 part_of ISO (PMID:29025994) RGD PMID:29025994 NCBI chr 7:8,998,050...9,004,724 JBrowse link
G Micall1 MICAL-like 1 located_in ISS
IEA
ISO
GO_REF:0000024
GO_REF:0000107
(PMID:21795389)
UniProt
Ensembl
RGD
PMID:21795389 GO_REF:0000024 GO_REF:0000107 NCBI chr 7:110,676,706...110,707,171 JBrowse link
G Mtm1 myotubularin 1 located_in ISO
IEA
ISS
(PMID:14722070)
GO_REF:0000044
GO_REF:0000024
RGD
UniProt
PMID:14722070 GO_REF:0000024 GO_REF:0000044 NCBI chr 6:488,923...506,882 JBrowse link
G Mvb12b multivesicular body subunit 12B located_in
is_active_in
ISO
IBA
(PMID:22232651)
GO_REF:0000033
RGD
GO_Central
PMID:22232651 GO_REF:0000033 NCBI chr 3:17,034,002...17,192,658 JBrowse link
G Myo5a myosin VA located_in IEA
ISO
GO_REF:0000107
(PMID:24006491)
Ensembl
RGD
PMID:24006491 GO_REF:0000107 NCBI chr 8:84,692,524...84,860,564 JBrowse link
G Nbr1 NBR1, autophagy cargo receptor located_in ISS
ISO
IEA
GO_REF:0000024
(PMID:19250911)
GO_REF:0000107
UniProt
RGD
Ensembl
PMID:19250911 GO_REF:0000024 GO_REF:0000107 NCBI chr10:86,978,024...87,006,664 JBrowse link
G Nmnat2 nicotinamide nucleotide adenylyltransferase 2 located_in ISO (PMID:20943658) RGD PMID:20943658 NCBI chr13:65,105,950...65,277,350 JBrowse link
G Nsg1 neuronal vesicle trafficking associated 1 located_in IDA
ISO
PMID:28874679
(PMID:28874679)
RGD PMID:28874679 PMID:28874679 RGD:13432228 NCBI chr14:72,648,771...72,670,521 JBrowse link
G Nsg2 neuronal vesicle trafficking associated 2 located_in IDA PMID:28874679 UniProt PMID:28874679 RGD:13432228 NCBI chr10:15,601,594...15,661,441 JBrowse link
G Ntrk1 neurotrophic receptor tyrosine kinase 1 located_in IDA
ISO
PMID:17724123
(PMID:24760869)
RGD PMID:24760869 PMID:17724123 RGD:8554481 NCBI chr 2:175,534,844...175,551,664 JBrowse link
G Osbpl1a oxysterol binding protein-like 1A located_in IEA
ISS
ISO
GO_REF:0000107
GO_REF:0000024
(PMID:16176980)
Ensembl
UniProt
RGD
PMID:16176980 GO_REF:0000024 GO_REF:0000107 NCBI chr18:3,904,006...4,094,635 JBrowse link
G Parm1 prostate androgen-regulated mucin-like protein 1 located_in
is_active_in
ISO
IBA
IEA
ISS
(PMID:18027867)
GO_REF:0000033
GO_REF:0000107
GO_REF:0000024
RGD
GO_Central
Ensembl
UniProt
PMID:18027867 GO_REF:0000024 GO_REF:0000033 GO_REF:0000107 NCBI chr14:16,468,309...16,577,339 JBrowse link
G Pcsk9 proprotein convertase subtilisin/kexin type 9 located_in ISS
ISO
GO_REF:0000024
(PMID:17461796), (PMID:18039658)
UniProt
RGD
PMID:17461796 PMID:18039658 GO_REF:0000024 NCBI chr 5:126,440,102...126,462,507 JBrowse link
G Pik3c3 phosphatidylinositol 3-kinase, catalytic subunit type 3 located_in ISO
IEA
ISS
(PMID:14617358)
GO_REF:0000107
GO_REF:0000024
RGD
Ensembl
UniProt
PMID:14617358 GO_REF:0000024 GO_REF:0000107 NCBI chr18:22,119,677...22,203,546 JBrowse link
G Pik3r4 phosphoinositide-3-kinase, regulatory subunit 4 located_in
is_active_in
ISO
IEA
IBA
ISS
(PMID:14617358)
GO_REF:0000044
GO_REF:0000033
GO_REF:0000024
RGD
UniProt
GO_Central
PMID:14617358 GO_REF:0000024 GO_REF:0000033 GO_REF:0000044 NCBI chr 8:115,146,660...115,195,326 JBrowse link
G Plekhm1 pleckstrin homology and RUN domain containing M1 located_in IEA GO_REF:0000044 UniProt GO_REF:0000044 NCBI chr10:88,313,837...88,366,182 JBrowse link
G Psap prosaposin located_in ISO
IEA
ISS
(PMID:26370502)
GO_REF:0000107
GO_REF:0000024
RGD
Ensembl
UniProt
PMID:26370502 GO_REF:0000024 GO_REF:0000107 NCBI chr20:28,756,951...28,783,422 JBrowse link
G Rab14 RAB14, member RAS oncogene family located_in IDA PMID:15004230 UniProt PMID:15004230 RGD:8554557 NCBI chr 3:38,899,430...38,920,572 JBrowse link
G Rab27a RAB27A, member RAS oncogene family located_in ISO
ISS
(PMID:17237785), (PMID:30771381)
GO_REF:0000024
RGD
UniProt
PMID:17237785 PMID:30771381 GO_REF:0000024 NCBI chr 8:82,663,373...82,717,267 JBrowse link
G Rab27b RAB27B, member RAS oncogene family located_in ISO
ISS
(PMID:30771381)
GO_REF:0000024
RGD
UniProt
PMID:30771381 GO_REF:0000024 NCBI chr18:65,870,230...66,069,597 JBrowse link
G Rab31 RAB31, member RAS oncogene family located_in IDA RGD PMID:11746448 RGD:2316821 NCBI chr 9:105,246,712...105,382,973 JBrowse link
G Rab34 RAB34, member RAS oncogene family located_in ISO (PMID:23197834) RGD PMID:23197834 NCBI chr10:63,581,542...63,585,608 JBrowse link
G Rab7a RAB7A, member RAS oncogene family is_active_in
located_in
TAS
IBA
ISO
IDA
GO_REF:0000033
(PMID:11172003), (PMID:15588329), (PMID:19509052), (PMID:20943658), (PMID:23028046), (PMID:24035762), (PMID:24334765), (PMID:24760869), (PMID:25592972), (PMID:27390154), (PMID:35353806)
(PMID:14617358), (PMID:15078902), (PMID:17010938), (PMID:18272684)
GO_Central
RGD
PMID:11172003 PMID:14617358 PMID:15078902 PMID:15588329 PMID:17010938 More... GO_REF:0000033, RGD:729760, RGD:4892338 NCBI chr 4:120,461,966...120,510,756 JBrowse link
G Rab7b Rab7b, member RAS oncogene family located_in
is_active_in
ISO
IBA
(PMID:20375062)
GO_REF:0000033
(PMID:17395780), (PMID:19587007)
RGD
GO_Central
PMID:17395780 PMID:19587007 PMID:20375062 GO_REF:0000033 NCBI chr13:45,673,396...45,699,798 JBrowse link
G Rab9a RAB9A, member RAS oncogene family located_in
is_active_in
ISO
IBA
(PMID:15078902)
GO_REF:0000033
RGD
GO_Central
PMID:15078902 GO_REF:0000033 NCBI chr  X:31,610,089...31,632,128 JBrowse link
G Rab9b RAB9B, member RAS oncogene family is_active_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr  X:100,220,897...100,231,591 JBrowse link
G Rap1a RAP1A, member of RAS oncogene family located_in IDA PMID:17724123 UniProt PMID:17724123 RGD:8554481 NCBI chr 2:195,896,967...195,974,851 JBrowse link
G Rapgef2 Rap guanine nucleotide exchange factor 2 located_in ISO
ISS
(PMID:17724123)
GO_REF:0000024
RGD
UniProt
PMID:17724123 GO_REF:0000024 NCBI chr 2:164,207,513...164,322,157 JBrowse link
G Rhob ras homolog family member B located_in ISO (PMID:17623777) RGD PMID:17623777 NCBI chr 6:31,363,752...31,365,926 JBrowse link
G Rilp Rab interacting lysosomal protein located_in ISO (PMID:17010938), (PMID:18272684) RGD PMID:17010938 PMID:18272684 NCBI chr10:60,355,276...60,358,434 JBrowse link
G Rnf128 ring finger protein 128 is_active_in
located_in
IBA
ISO
GO_REF:0000033
(PMID:12705856)
GO_Central
RGD
PMID:12705856 GO_REF:0000033 NCBI chr  X:103,183,643...103,298,431 JBrowse link
G Rnf133 ring finger protein 133 is_active_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr 4:52,140,584...52,143,357 JBrowse link
G Rnf149 ring finger protein 149 is_active_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr 9:41,826,825...41,854,381 JBrowse link
G RT1-DMa RT1 class II, locus DMa located_in ISO (PMID:7584146), (PMID:7985028) RGD PMID:7584146 PMID:7985028 NCBI chr20:4,707,028...4,710,432 JBrowse link
G Rubcn rubicon autophagy regulator located_in
is_active_in
ISO
IBA
(PMID:19270696)
GO_REF:0000033
RGD
GO_Central
PMID:19270696 GO_REF:0000033 NCBI chr11:67,907,534...67,964,347 JBrowse link
G Rufy1 RUN and FYVE domain containing 1 NOT|located_in ISO (PMID:11172003) RGD PMID:11172003 NCBI chr10:34,705,741...34,750,644 JBrowse link
G Sdf4 stromal cell derived factor 4 located_in IDA
ISO
IEA
ISS
PMID:17442889
(PMID:8609160)
GO_REF:0000107
GO_REF:0000024
RGD
Ensembl
BHF-UCL
PMID:8609160 PMID:17442889 GO_REF:0000024 GO_REF:0000107, RGD:2312426 NCBI chr 5:171,868,591...171,885,827 JBrowse link
G Siglec1 sialic acid binding Ig like lectin 1 located_in
is_active_in
ISO
IBA
(PMID:21359217)
GO_REF:0000033
RGD
GO_Central
PMID:21359217 GO_REF:0000033 NCBI chr 3:118,287,988...118,307,125 JBrowse link
G Sla2 Src-like-adaptor 2 located_in ISO (PMID:12024036) RGD PMID:12024036 NCBI chr 3:145,367,070...145,383,586 JBrowse link
G Slc11a1 solute carrier family 11 member 1 located_in ISO (PMID:17620357), (PMID:9034150) RGD PMID:9034150 PMID:17620357 NCBI chr 9:75,957,193...75,968,115 JBrowse link
G Slc11a2 solute carrier family 11 member 2 located_in ISO (PMID:12475959), (PMID:15792797)
(PMID:18776082)
RGD PMID:12475959 PMID:15792797 PMID:18776082 NCBI chr 7:131,503,076...131,540,246 JBrowse link
G Slc30a2 solute carrier family 30 member 2 located_in ISO
IEA
(PMID:17349999)
GO_REF:0000107
RGD
Ensembl
PMID:17349999 GO_REF:0000107 NCBI chr 5:151,843,451...151,855,674 JBrowse link
G Slc30a3 solute carrier family 30 member 3 located_in ISO (PMID:17349999) RGD PMID:17349999 NCBI chr 6:25,264,310...25,284,720 JBrowse link
G Slc30a4 solute carrier family 30 member 4 located_in ISO
ISS
IEA
(PMID:17349999)
GO_REF:0000024
GO_REF:0000107
RGD
UniProt
Ensembl
PMID:17349999 GO_REF:0000024 GO_REF:0000107 NCBI chr 3:109,753,270...109,775,306 JBrowse link
G Slc31a1 solute carrier family 31 member 1 located_in ISO (PMID:24167251) RGD PMID:24167251 NCBI chr 5:75,814,744...75,844,241 JBrowse link
G Slc31a2 solute carrier family 31 member 2 located_in ISO (PMID:24167251) RGD PMID:24167251 NCBI chr 5:75,738,008...75,748,542 JBrowse link
G Slc38a9 solute carrier family 38, member 9 located_in ISO
ISS
(PMID:25561175)
GO_REF:0000024
RGD
UniProt
PMID:25561175 GO_REF:0000024 NCBI chr 2:44,291,637...44,374,897 JBrowse link
G Slc9a6 solute carrier family 9 member A6 located_in ISO (PMID:24035762) RGD PMID:24035762 NCBI chr  X:139,468,045...139,524,111 JBrowse link
G Smo smoothened, frizzled class receptor located_in IEA
ISO
GO_REF:0000107
(PMID:35353806)
Ensembl
RGD
PMID:35353806 GO_REF:0000107 NCBI chr 4:59,311,084...59,341,280 JBrowse link
G Snx14 sorting nexin 14 located_in
is_active_in
ISO
IBA
(PMID:25848753)
GO_REF:0000033
RGD
GO_Central
PMID:25848753 GO_REF:0000033 NCBI chr 8:89,283,673...89,390,597 JBrowse link
G Snx16 sorting nexin 16 located_in
is_active_in
ISS
IBA
IEA
ISO
GO_REF:0000024
GO_REF:0000033
GO_REF:0000107
(PMID:12813048)
UniProt
GO_Central
Ensembl
RGD
PMID:12813048 GO_REF:0000024 GO_REF:0000033 GO_REF:0000107 NCBI chr 2:91,335,896...91,357,622 JBrowse link
G Sppl2a signal peptide peptidase-like 2A located_in ISO (PMID:16829952) RGD PMID:16829952 NCBI chr 3:134,602,684...134,646,752 JBrowse link
G Sqstm1 sequestosome 1 located_in IEA GO_REF:0000044 UniProt GO_REF:0000044 NCBI chr10:35,026,598...35,037,750 JBrowse link
G Src SRC proto-oncogene, non-receptor tyrosine kinase located_in ISO (PMID:20605918) RGD PMID:20605918 NCBI chr 3:166,511,616...166,559,463 JBrowse link
G Stx7 syntaxin 7 located_in ISO
IEA
(PMID:18980942), (PMID:21438968)
GO_REF:0000107
RGD
Ensembl
PMID:18980942 PMID:21438968 GO_REF:0000107 NCBI chr 1:21,197,075...21,237,320 JBrowse link
G Stx8 syntaxin 8 located_in
is_active_in
ISO
IEA
(PMID:10564279)
(PMID:16760431)
GO_REF:0000107
RGD
Ensembl
PMID:10564279 PMID:16760431 GO_REF:0000107 NCBI chr10:52,655,643...52,900,048 JBrowse link
G Tcirg1 T-cell immune regulator 1, ATPase H+ transporting V0 subunit A3 located_in ISO (PMID:12672822), (PMID:19549681) RGD PMID:12672822 PMID:19549681 NCBI chr 1:210,556,270...210,568,021 JBrowse link
G Tf transferrin located_in ISO (PMID:15880641) RGD PMID:15880641 NCBI chr 8:103,789,780...103,816,487 JBrowse link
G Ticam2 TIR domain containing adaptor molecule 2 located_in ISO (PMID:19412184) RGD PMID:19412184 NCBI chr18:39,289,902...39,311,462 JBrowse link
G Tmem192 transmembrane protein 192 located_in
is_active_in
ISO
IEA
IBA
(PMID:20370317)
GO_REF:0000107
GO_REF:0000033
RGD
Ensembl
GO_Central
PMID:20370317 GO_REF:0000033 GO_REF:0000107 NCBI chr16:24,740,166...24,760,994 JBrowse link
G Tmem230 transmembrane protein 230 located_in ISS
ISO
GO_REF:0000024
(PMID:27270108)
UniProt
RGD
PMID:27270108 GO_REF:0000024 NCBI chr 3:119,473,109...119,497,617 JBrowse link
G Tmem25 transmembrane protein 25 located_in ISO (PMID:31424425) RGD PMID:31424425 NCBI chr 8:54,003,907...54,009,469 JBrowse link
G Tmem59 transmembrane protein 59 located_in
is_active_in
ISO
IBA
(PMID:23376921)
GO_REF:0000033
RGD
GO_Central
PMID:23376921 GO_REF:0000033 NCBI chr 5:121,962,507...121,983,625 JBrowse link
G Tmem9 transmembrane protein 9 located_in ISO (PMID:12359240) RGD PMID:12359240 NCBI chr13:50,008,829...50,027,556 JBrowse link
G Trappc9 trafficking protein particle complex subunit 9 NOT|located_in ISO (PMID:20004763) RGD PMID:20004763 NCBI chr 7:104,521,593...104,998,352 JBrowse link
G Tsg101 tumor susceptibility 101 located_in ISO
IEA
(PMID:15126635)
GO_REF:0000107
RGD
Ensembl
PMID:15126635 GO_REF:0000107 NCBI chr 1:106,549,035...106,578,859 JBrowse link
G Ttpa alpha tocopherol transfer protein is_active_in IDA
IBA
GO_REF:0000033 GO_Central
RGD
PMID:14531858 GO_REF:0000033, RGD:1600431 NCBI chr 5:33,497,537...33,518,936 JBrowse link
G Unc13d unc-13 homolog D located_in IEA GO_REF:0000044 UniProt GO_REF:0000044 NCBI chr10:101,296,755...101,311,513 JBrowse link
G Uvrag UV radiation resistance associated located_in ISO (PMID:19270696) RGD PMID:19270696 NCBI chr 1:153,185,356...153,442,200 JBrowse link
G Vamp5 vesicle-associated membrane protein 5 located_in ISO (PMID:9725904) RGD PMID:9725904 NCBI chr 4:104,423,813...104,435,059 JBrowse link
G Vipas39 VPS33B interacting protein, apical-basolateral polarity regulator, spe-39 homolog located_in ISO
IEA
(PMID:19109425)
GO_REF:0000044
RGD
UniProt
PMID:19109425 GO_REF:0000044 NCBI chr 6:106,888,284...106,913,139 JBrowse link
G Vopp1 VOPP1 WW domain binding protein located_in ISO (PMID:30285739) RGD PMID:30285739 NCBI chr 4:87,363,678...87,432,747 JBrowse link
G Vps11 VPS11 core subunit of CORVET and HOPS complexes located_in ISO (PMID:11382755), (PMID:21148287) RGD PMID:11382755 PMID:21148287 NCBI chr 8:53,580,939...53,595,378 JBrowse link
G Vps13c vacuolar protein sorting 13 homolog C located_in ISO (PMID:30093493) RGD PMID:30093493 NCBI chr 8:68,478,366...68,651,893 JBrowse link
G Vps16 VPS16 core subunit of CORVET and HOPS complexes located_in ISO (PMID:11382755), (PMID:19109425) RGD PMID:11382755 PMID:19109425 NCBI chr 3:117,622,534...117,644,041 JBrowse link
G Vps18 VPS18 core subunit of CORVET and HOPS complexes located_in ISO (PMID:11382755) RGD PMID:11382755 NCBI chr 3:106,279,444...106,290,298 JBrowse link
G Vps26b VPS26 retromer complex component B located_in ISO (PMID:21920005) RGD PMID:21920005 NCBI chr 8:25,415,877...25,436,985 JBrowse link
G Vps29 VPS29 retromer complex component located_in IEA GO_REF:0000044 UniProt GO_REF:0000044 NCBI chr12:34,208,911...34,217,977 JBrowse link
G Vps33a VPS33A core subunit of CORVET and HOPS complexes located_in ISO (PMID:19109425) RGD PMID:19109425 NCBI chr12:33,024,596...33,051,399 JBrowse link
G Vps33b VPS33B, late endosome and lysosome associated located_in ISO (PMID:15052268) RGD PMID:15052268 NCBI chr 1:143,633,167...143,656,228 JBrowse link
G Vps35 VPS35 retromer complex component is_active_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr19:21,765,771...21,801,620 JBrowse link
G Vps36 vacuolar protein sorting 36 homolog located_in ISO (PMID:15755741) RGD PMID:15755741 NCBI chr16:69,810,404...69,834,789 JBrowse link
G Vps39 VPS39 subunit of HOPS complex located_in ISO (PMID:33422265) RGD PMID:33422265 NCBI chr 3:107,266,846...107,304,884 JBrowse link
G Vps41 VPS41 subunit of HOPS complex located_in
is_active_in
ISO
IBA
(PMID:33422265)
(PMID:14668490)
GO_REF:0000033
RGD
GO_Central
PMID:14668490 PMID:33422265 GO_REF:0000033 NCBI chr17:50,758,732...50,923,129 JBrowse link
G Vps4a vacuolar protein sorting 4 homolog A located_in ISO (PMID:10637304), (PMID:15075231) RGD PMID:10637304 PMID:15075231 NCBI chr19:34,934,999...34,948,888 JBrowse link
G Vps8 VPS8 subunit of CORVET complex is_active_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr11:79,402,236...79,634,234 JBrowse link
G Washc1 WASH complex subunit 1 located_in ISO (PMID:27390154) RGD PMID:27390154 NCBI chr 9:105,722,779...105,830,836 JBrowse link
G Zc3hav1 zinc finger CCCH-type containing, antiviral 1 located_in IEA GO_REF:0000107 Ensembl GO_REF:0000107 NCBI chr 4:67,012,129...67,062,428 JBrowse link
G Zfyve26 zinc finger FYVE-type containing 26 located_in ISO
IEA
(PMID:25365221)
GO_REF:0000107
RGD
Ensembl
PMID:25365221 GO_REF:0000107 NCBI chr 6:98,031,874...98,095,538 JBrowse link
cytoplasmic side of late endosome membrane term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Cdip1 cell death-inducing p53 target 1 located_in
is_active_in
ISS
ISO
IEA
IBA
GO_REF:0000024
(PMID:27582497)
GO_REF:0000107
GO_REF:0000033
UniProt
RGD
Ensembl
GO_Central
PMID:27582497 GO_REF:0000024 GO_REF:0000033 GO_REF:0000107 NCBI chr10:10,773,538...10,796,979 JBrowse link
G Litaf lipopolysaccharide-induced TNF factor located_in
is_active_in
ISS
ISO
IBA
GO_REF:0000024
(PMID:27582497)
GO_REF:0000033
UniProt
RGD
GO_Central
PMID:27582497 GO_REF:0000024 GO_REF:0000033 NCBI chr10:4,656,308...4,692,981 JBrowse link
late endosome membrane term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Abca5 ATP binding cassette subfamily A member 5 located_in IEA GO_REF:0000044 UniProt GO_REF:0000044 NCBI chr10:95,739,610...95,808,633 JBrowse link
G Abcb6 ATP binding cassette subfamily B member 6 located_in IDA PMID:18160489 UniProt PMID:18160489 RGD:42722002 NCBI chr 9:84,117,222...84,125,939 JBrowse link
G Abhd6 abhydrolase domain containing 6, acylglycerol lipase located_in ISS
IEA
ISO
GO_REF:0000024
GO_REF:0000044
(PMID:26491015)
UniProt
RGD
PMID:26491015 GO_REF:0000024 GO_REF:0000044 NCBI chr15:16,859,740...16,907,094 JBrowse link
G Anxa2 annexin A2 located_in ISO (PMID:23360953) RGD PMID:23360953 NCBI chr 8:78,986,252...79,022,638 JBrowse link
G Anxa6 annexin A6 located_in ISO (PMID:23360953) RGD PMID:23360953 NCBI chr10:39,101,395...39,156,483 JBrowse link
G Anxa8 annexin A8 located_in ISO (PMID:18923148) RGD PMID:18923148 NCBI chr16:9,397,144...9,412,072 JBrowse link
G Ap5m1 adaptor related protein complex 5 subunit mu 1 located_in IEA GO_REF:0000044 UniProt GO_REF:0000044 NCBI chr15:22,355,478...22,385,222 JBrowse link
G Arl8a ARF like GTPase 8A located_in IEA GO_REF:0000044 UniProt GO_REF:0000044 NCBI chr13:46,585,845...46,594,851 JBrowse link
G Arl8b ARF like GTPase 8B located_in IEA GO_REF:0000044 UniProt GO_REF:0000044 NCBI chr 4:141,748,634...141,792,605 JBrowse link
G Atg9a autophagy related 9A located_in IEA GO_REF:0000044 UniProt GO_REF:0000044 NCBI chr 9:76,677,403...76,688,050 JBrowse link
G Atp10b ATPase phospholipid transporting 10B located_in ISO (PMID:26567335) RGD PMID:26567335 NCBI chr10:27,495,207...27,751,313 JBrowse link
G Atp13a2 ATPase cation transporting 13A2 located_in
is_active_in
ISO
IBA
(PMID:29505581)
GO_REF:0000033
RGD
GO_Central
PMID:29505581 GO_REF:0000033 NCBI chr 5:153,292,722...153,312,143 JBrowse link
G Atp13a3 ATPase 13A3 located_in
is_active_in
ISO
IBA
(PMID:29505581)
GO_REF:0000033
RGD
GO_Central
PMID:29505581 GO_REF:0000033 NCBI chr11:70,364,998...70,442,005 JBrowse link
G Atp13a4 ATPase 13A4 located_in
is_active_in
ISO
IBA
(PMID:29505581)
GO_REF:0000033
RGD
GO_Central
PMID:29505581 GO_REF:0000033 NCBI chr11:84,727,014...84,864,747 JBrowse link
G Atp13a5 ATPase 13A5 is_active_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr11:71,376,388...71,515,789 JBrowse link
G B2m beta-2 microglobulin is_active_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr 3:129,549,236...129,555,354 JBrowse link
G Baiap3 BAI1-associated protein 3 located_in
is_active_in
ISO
IBA
(PMID:28626000)
GO_REF:0000033
RGD
GO_Central
PMID:28626000 GO_REF:0000033 NCBI chr10:14,260,269...14,273,019 JBrowse link
G Cd63 Cd63 molecule located_in ISS
IEA
ISO
GO_REF:0000024
GO_REF:0000044
(PMID:23632027)
UniProt
RGD
PMID:23632027 GO_REF:0000024 GO_REF:0000044 NCBI chr 7:1,909,538...1,924,937 JBrowse link
G Cd68 Cd68 molecule is_active_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr10:54,880,562...54,882,441 JBrowse link
G Chmp4bl1 chromatin modifying protein 4B-like 1 located_in IEA GO_REF:0000044 UniProt GO_REF:0000044 NCBI chr 4:68,049,742...68,050,791 JBrowse link
G Clcn3 chloride voltage-gated channel 3 located_in IEA
ISO
GO_REF:0000044
(PMID:16222710)
UniProt
RGD
PMID:16222710 GO_REF:0000044 NCBI chr16:29,127,152...29,200,133 JBrowse link
G Clcn4 chloride voltage-gated channel 4 located_in IEA GO_REF:0000044 UniProt GO_REF:0000044 NCBI chr  X:23,729,194...23,795,391 JBrowse link
G Cyb561a3 cytochrome b561 family, member A3 located_in ISS
IEA
ISO
GO_REF:0000024
GO_REF:0000044
(PMID:16996694)
UniProt
RGD
PMID:16996694 GO_REF:0000024 GO_REF:0000044 NCBI chr 1:216,641,108...216,662,495 JBrowse link
G ENSRNOG00000063098 located_in IEA GO_REF:0000044 UniProt GO_REF:0000044
G ENSRNOG00000066475 located_in IEA GO_REF:0000044 UniProt GO_REF:0000044
G ENSRNOG00000070540 is_active_in IBA GO_REF:0000033 GO_Central GO_REF:0000033
G Entrep1 endosomal transmembrane epsin interactor 1 located_in ISO (PMID:34927784) RGD PMID:34927784 NCBI chr 1:221,592,500...221,646,603 JBrowse link
G Gosr2 golgi SNAP receptor complex member 2 is_active_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr10:89,085,323...89,105,665 JBrowse link
G Ifitm2 interferon induced transmembrane protein 2 located_in ISO (PMID:26354436) RGD PMID:26354436 NCBI chr 1:205,481,168...205,482,348 JBrowse link
G Ifitm3 interferon induced transmembrane protein 3 located_in IEA GO_REF:0000044 UniProt GO_REF:0000044 NCBI chr 1:196,111,026...196,112,135 JBrowse link
G Ighe immunoglobulin heavy constant epsilon is_active_in IBA GO_REF:0000033 GO_Central GO_REF:0000033
G Irgm immunity-related GTPase M located_in IEA GO_REF:0000044 UniProt GO_REF:0000044 NCBI chr10:33,233,513...33,241,594 JBrowse link
G Kcnk6 potassium two pore domain channel subfamily K member 6 located_in IDA PMID:28381826 UniProt PMID:28381826 RGD:408345210 NCBI chr 1:84,525,613...84,533,948 JBrowse link
G Lamp1 lysosomal-associated membrane protein 1 is_active_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr16:83,058,131...83,082,843 JBrowse link
G Lamp2 lysosomal-associated membrane protein 2 located_in
is_active_in
ISO
IBA
IEA
(PMID:21896273)
GO_REF:0000033
GO_REF:0000107
RGD
GO_Central
Ensembl
PMID:21896273 GO_REF:0000033 GO_REF:0000107 NCBI chr  X:122,038,734...122,087,745 JBrowse link
G Lamp3 lysosomal-associated membrane protein 3 is_active_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr11:94,657,817...94,726,451 JBrowse link
G Lamp5 lysosomal-associated membrane protein family, member 5 is_active_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr 3:123,372,462...123,384,973 JBrowse link
G Lamtor1 late endosomal/lysosomal adaptor, MAPK and MTOR activator 1 located_in IDA
IEA
PMID:19177150
GO_REF:0000044
UniProt PMID:19177150 GO_REF:0000044, RGD:8553879 NCBI chr 1:165,684,001...165,689,698 JBrowse link
G Lamtor1l1 late endosomal/lysosomal adaptor, MAPK and MTOR activator 1 like 1 located_in IDA
IEA
PMID:19177150
GO_REF:0000044
UniProt PMID:19177150 GO_REF:0000044, RGD:8553879 NCBI chr  X:34,637,460...34,638,509 JBrowse link
G Lamtor2 late endosomal/lysosomal adaptor, MAPK and MTOR activator 2 located_in IEA GO_REF:0000044 UniProt GO_REF:0000044 NCBI chr 2:174,008,556...174,011,950 JBrowse link
G Lamtor3 late endosomal/lysosomal adaptor, MAPK and MTOR activator 3 located_in IEA GO_REF:0000044 UniProt GO_REF:0000044 NCBI chr 2:226,411,389...226,423,612 JBrowse link
G Laptm4a lysosomal protein transmembrane 4 alpha located_in ISO
ISS
IEA
(PMID:22096579)
GO_REF:0000024
GO_REF:0000107
RGD
UniProt
Ensembl
PMID:22096579 GO_REF:0000024 GO_REF:0000107 NCBI chr 6:31,719,287...31,737,023 JBrowse link
G Laptm4b lysosomal protein transmembrane 4 beta located_in ISS
ISO
GO_REF:0000024
(PMID:21224396), (PMID:22096579), (PMID:25588945)
UniProt
RGD
PMID:21224396 PMID:22096579 PMID:25588945 GO_REF:0000024 NCBI chr 7:65,434,525...65,477,386 JBrowse link
G Litaf lipopolysaccharide-induced TNF factor located_in IEA GO_REF:0000044 UniProt GO_REF:0000044 NCBI chr10:4,656,308...4,692,981 JBrowse link
G Litafd LITAF domain containing located_in IEA GO_REF:0000044 UniProt GO_REF:0000044 NCBI chr10:6,931,719...6,935,869 JBrowse link
G Mapkap1 MAPK associated protein 1 located_in IEA GO_REF:0000044 UniProt GO_REF:0000044 NCBI chr 3:38,113,268...38,315,913 JBrowse link
G Marchf1 membrane associated ring-CH-type finger 1 located_in
is_active_in
ISO
IBA
(PMID:19117940)
(PMID:19880452)
GO_REF:0000033
RGD
GO_Central
PMID:19117940 PMID:19880452 GO_REF:0000033 NCBI chr16:23,255,551...24,114,290 JBrowse link
G Marchf8 membrane associated ring-CH-type finger 8 is_active_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr 4:149,415,642...149,530,771 JBrowse link
G Micall1 MICAL-like 1 located_in IEA GO_REF:0000044 UniProt GO_REF:0000044 NCBI chr 7:110,676,706...110,707,171 JBrowse link
G Mitd1 microtubule interacting and trafficking domain containing 1 located_in IEA GO_REF:0000044 UniProt GO_REF:0000044 NCBI chr 9:40,113,943...40,125,280 JBrowse link
G Mmd monocyte to macrophage differentiation-associated located_in IEA GO_REF:0000044 UniProt GO_REF:0000044 NCBI chr10:75,570,366...75,598,610 JBrowse link
G Mr1 major histocompatibility complex, class I-related located_in ISO
IEA
(PMID:27043408)
GO_REF:0000107
RGD
Ensembl
PMID:27043408 GO_REF:0000107 NCBI chr13:69,850,420...69,868,302 JBrowse link
G Mreg melanoregulin located_in ISO (PMID:30174147) RGD PMID:30174147 NCBI chr 9:73,786,727...73,842,081 JBrowse link
G Mtmr4 myotubularin related protein 4 located_in ISO (PMID:29962048) RGD PMID:29962048 NCBI chr10:72,890,665...72,913,598 JBrowse link
G Mvb12a multivesicular body subunit 12A located_in IEA GO_REF:0000044 UniProt GO_REF:0000044 NCBI chr16:18,252,227...18,257,111 JBrowse link
G Mvb12b multivesicular body subunit 12B located_in IEA GO_REF:0000044 UniProt GO_REF:0000044 NCBI chr 3:17,034,002...17,192,658 JBrowse link
G Notch1 notch receptor 1 located_in IEA GO_REF:0000044 UniProt GO_REF:0000044 NCBI chr 3:29,676,040...29,721,613 JBrowse link
G Npc1 NPC intracellular cholesterol transporter 1 located_in ISO (PMID:27378690) RGD PMID:27378690 NCBI chr18:3,379,482...3,425,100 JBrowse link
G Ntrk1 neurotrophic receptor tyrosine kinase 1 located_in IEA GO_REF:0000044 UniProt GO_REF:0000044 NCBI chr 2:175,534,844...175,551,664 JBrowse link
G Pip4p1 phosphatidylinositol-4,5-bisphosphate 4-phosphatase 1 located_in
is_active_in
ISO
IBA
IEA
ISS
(PMID:16365287)
(PMID:29378918)
GO_REF:0000033
GO_REF:0000044
GO_REF:0000024
RGD
GO_Central
UniProt
PMID:16365287 PMID:29378918 GO_REF:0000024 GO_REF:0000033 GO_REF:0000044 NCBI chr15:24,146,854...24,150,739 JBrowse link
G Pip4p2 phosphatidylinositol-4,5-bisphosphate 4-phosphatase 2 located_in
is_active_in
ISS
ISO
IBA
IEA
GO_REF:0000024
(PMID:29378918)
GO_REF:0000033
GO_REF:0000044
(PMID:16365287)
UniProt
RGD
GO_Central
PMID:16365287 PMID:29378918 GO_REF:0000024 GO_REF:0000033 GO_REF:0000044 NCBI chr 5:28,259,821...28,307,225 JBrowse link
G Pld1 phospholipase D1 located_in IEA GO_REF:0000044 UniProt GO_REF:0000044 NCBI chr 2:112,777,820...112,975,857 JBrowse link
G Pld3 phospholipase D family, member 3 located_in ISS
ISO
IEA
GO_REF:0000024
(PMID:28128235)
GO_REF:0000044
(PMID:29386126)
UniProt
RGD
PMID:28128235 PMID:29386126 GO_REF:0000024 GO_REF:0000044 NCBI chr 1:82,821,863...82,844,280 JBrowse link
G Plekhm1 pleckstrin homology and RUN domain containing M1 located_in IEA GO_REF:0000044 UniProt GO_REF:0000044 NCBI chr10:88,313,837...88,366,182 JBrowse link
G Rab7a RAB7A, member RAS oncogene family located_in ISS
ISO
IEA
GO_REF:0000024
(PMID:23708524)
GO_REF:0000044
GO_Central
RGD
UniProt
PMID:23708524 GO_REF:0000024 GO_REF:0000044 NCBI chr 4:120,461,966...120,510,756 JBrowse link
G Rhob ras homolog family member B located_in IEA GO_REF:0000044 UniProt GO_REF:0000044 NCBI chr 6:31,363,752...31,365,926 JBrowse link
G Rmc1 regulator of MON1-CCZ1 located_in
is_active_in
ISO
IBA
(PMID:29038162)
GO_REF:0000033
RGD
GO_Central
PMID:29038162 GO_REF:0000033 NCBI chr18:3,359,848...3,379,764 JBrowse link
G Rnf13 ring finger protein 13 located_in ISS
ISO
GO_REF:0000024
(PMID:19292867)
UniProt
RGD
PMID:19292867 GO_REF:0000024 NCBI chr 2:141,927,887...142,061,801 JBrowse link
G RT1-B RT1 class II, locus B is_active_in IBA GO_REF:0000033 GO_Central GO_REF:0000033
G RT1-Ba RT1 class II, locus Ba is_active_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr20:4,575,134...4,579,727 JBrowse link
G RT1-Bb RT1 class II, locus Bb is_active_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr20:4,598,475...4,604,118 JBrowse link
G RT1-Da RT1 class II, locus Da located_in
is_active_in
ISO
IBA
(PMID:18305173), (PMID:19117940), (PMID:9075930)
GO_REF:0000033
RGD
GO_Central
PMID:9075930 PMID:18305173 PMID:19117940 GO_REF:0000033 NCBI chr20:4,513,464...4,518,457 JBrowse link
G RT1-Db1 RT1 class II, locus Db1 located_in
is_active_in
ISO
IBA
(PMID:18305173), (PMID:9075930)
GO_REF:0000033
RGD
GO_Central
PMID:9075930 PMID:18305173 GO_REF:0000033 NCBI chr20:4,548,664...4,558,237 JBrowse link
G RT1-Db2 RT1 class II, locus Db2 is_active_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr20:4,520,723...4,539,724 JBrowse link
G RT1-DMa RT1 class II, locus DMa located_in
is_active_in
ISO
IBA
(PMID:9075930)
GO_REF:0000033
RGD
GO_Central
PMID:9075930 GO_REF:0000033 NCBI chr20:4,707,028...4,710,432 JBrowse link
G RT1-DMb RT1 class II, locus DMb located_in
is_active_in
ISO
IBA
(PMID:9075930)
GO_REF:0000033
RGD
GO_Central
PMID:9075930 GO_REF:0000033 NCBI chr20:4,693,102...4,700,340 JBrowse link
G RT1-DOb RT1 class II, locus DOb is_active_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr20:4,621,336...4,627,537 JBrowse link
G RT1-Ha RT1 class II, locus Ha is_active_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr20:4,760,631...4,770,662 JBrowse link
G RT1-Hb-ps1 RT1 class II, locus Hb, pseudogene 1 is_active_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr20:4,775,598...4,779,590 JBrowse link
G Slc11a1 solute carrier family 11 member 1 located_in IEA
ISO
GO_REF:0000044
(PMID:9730978)
UniProt
RGD
PMID:9730978 GO_REF:0000044 NCBI chr 9:75,957,193...75,968,115 JBrowse link
G Slc11a2 solute carrier family 11 member 2 located_in IDA
IEA
ISO
GO_REF:0000044
(PMID:10751401)
UniProt
RGD
PMID:10751401 PMID:16449358 GO_REF:0000044, RGD:1580424 NCBI chr 7:131,503,076...131,540,246 JBrowse link
G Slc1a1 solute carrier family 1 member 1 located_in IEA GO_REF:0000044 UniProt GO_REF:0000044 NCBI chr 1:226,549,932...226,631,925 JBrowse link
G Slc29a3 solute carrier family 29 member 3 located_in ISO
IEA
ISS
(PMID:15701636)
GO_REF:0000107
GO_REF:0000024
RGD
Ensembl
UniProt
PMID:15701636 GO_REF:0000024 GO_REF:0000107 NCBI chr20:28,645,265...28,685,388 JBrowse link
G Slc30a3 solute carrier family 30 member 3 located_in IEA GO_REF:0000044 UniProt GO_REF:0000044 NCBI chr 6:25,264,310...25,284,720 JBrowse link
G Slc30a4 solute carrier family 30 member 4 located_in IEA GO_REF:0000044 UniProt GO_REF:0000044 NCBI chr 3:109,753,270...109,775,306 JBrowse link
G Slc31a1 solute carrier family 31 member 1 located_in IEA GO_REF:0000044 UniProt GO_REF:0000044 NCBI chr 5:75,814,744...75,844,241 JBrowse link
G Slc31a2 solute carrier family 31 member 2 located_in ISO (PMID:17617060) RGD PMID:17617060 NCBI chr 5:75,738,008...75,748,542 JBrowse link
G Slc38a9 solute carrier family 38, member 9 located_in IEA GO_REF:0000044 UniProt GO_REF:0000044 NCBI chr 2:44,291,637...44,374,897 JBrowse link
G Slc39a14 solute carrier family 39 member 14 located_in ISO (PMID:27703010) RGD PMID:27703010 NCBI chr15:51,786,517...51,833,260 JBrowse link
G Slc9a6 solute carrier family 9 member A6 located_in IEA GO_REF:0000044 UniProt GO_REF:0000044 NCBI chr  X:139,468,045...139,524,111 JBrowse link
G Slc9a9 solute carrier family 9 member A9 located_in IEA GO_REF:0000044 UniProt GO_REF:0000044 NCBI chr 8:104,112,279...104,675,944 JBrowse link
G Snf8 SNF8 subunit of ESCRT-II located_in ISO (PMID:17010938) RGD PMID:17010938 NCBI chr10:81,481,054...81,493,430 JBrowse link
G Snx16 sorting nexin 16 located_in IEA GO_REF:0000044 UniProt GO_REF:0000044 NCBI chr 2:91,335,896...91,357,622 JBrowse link
G Spaar small regulatory polypeptide of amino acid response located_in ISO (PMID:28024296) RGD PMID:28024296 NCBI chr 5:57,985,423...57,987,482 JBrowse link
G Sppl2a signal peptide peptidase-like 2A located_in ISO (PMID:21896273) RGD PMID:21896273 NCBI chr 3:134,602,684...134,646,752 JBrowse link
G Stard3 StAR-related lipid transfer domain containing 3 located_in
is_active_in
ISO
IBA
(PMID:24105263), (PMID:28377464)
GO_REF:0000033
RGD
GO_Central
PMID:24105263 PMID:28377464 GO_REF:0000033 NCBI chr10:83,357,329...83,379,873 JBrowse link
G Stard3nl STARD3 N-terminal like located_in
is_active_in
ISO
IBA
(PMID:24105263)
GO_REF:0000033
RGD
GO_Central
PMID:24105263 GO_REF:0000033 NCBI chr17:45,583,278...45,617,226 JBrowse link
G Stx7 syntaxin 7 IDA RGD PMID:15133481 RGD:4892614 NCBI chr 1:21,197,075...21,237,320 JBrowse link
G Stx8 syntaxin 8 IDA RGD PMID:15133481 RGD:4892614 NCBI chr10:52,655,643...52,900,048 JBrowse link
G Tmem106b transmembrane protein 106B located_in IEA GO_REF:0000044 UniProt GO_REF:0000044 NCBI chr 4:41,328,125...41,347,315 JBrowse link
G Tmem163 transmembrane protein 163 located_in IEA GO_REF:0000044 UniProt GO_REF:0000044 NCBI chr13:41,520,595...41,693,938 JBrowse link
G Tmem30a transmembrane protein 30A located_in IEA
ISO
GO_REF:0000107
(PMID:26567335)
Ensembl
RGD
PMID:26567335 GO_REF:0000107 NCBI chr 8:80,728,749...80,757,197 JBrowse link
G Tmem59 transmembrane protein 59 located_in IEA GO_REF:0000044 UniProt GO_REF:0000044 NCBI chr 5:121,962,507...121,983,625 JBrowse link
G Tsg101 tumor susceptibility 101 located_in IEA GO_REF:0000044 UniProt GO_REF:0000044 NCBI chr 1:106,549,035...106,578,859 JBrowse link
G Ubxn6 UBX domain protein 6 located_in ISO (PMID:21822278) RGD PMID:21822278 NCBI chr 9:900,883...906,047 JBrowse link
G Vamp7 vesicle-associated membrane protein 7 located_in IDA PMID:10459012 RGD
UniProt
PMID:15133481 PMID:10459012 RGD:4892614, RGD:8554473 NCBI chr12:16,728,486...16,764,261 JBrowse link
G Vamp8 vesicle-associated membrane protein 8 located_in IDA
IEA
ISO
GO_REF:0000107
(PMID:23217709)
Ensembl
RGD
PMID:23217709 PMID:15133481 GO_REF:0000107, RGD:4892614 NCBI chr 4:104,442,383...104,452,884 JBrowse link
G Vamp9 vesicle-associated membrane protein 9 located_in IEA GO_REF:0000044 UniProt GO_REF:0000044 NCBI chr14:9,644,109...9,681,254 JBrowse link
G Vopp1 VOPP1 WW domain binding protein located_in IEA GO_REF:0000044 UniProt GO_REF:0000044 NCBI chr 4:87,363,678...87,432,747 JBrowse link
G Vps11 VPS11 core subunit of CORVET and HOPS complexes located_in IEA GO_REF:0000044 UniProt GO_REF:0000044 NCBI chr 8:53,580,939...53,595,378 JBrowse link
G Vps16 VPS16 core subunit of CORVET and HOPS complexes located_in IEA GO_REF:0000044 UniProt GO_REF:0000044 NCBI chr 3:117,622,534...117,644,041 JBrowse link
G Vps18 VPS18 core subunit of CORVET and HOPS complexes located_in IEA GO_REF:0000044 UniProt GO_REF:0000044 NCBI chr 3:106,279,444...106,290,298 JBrowse link
G Vps33a VPS33A core subunit of CORVET and HOPS complexes located_in IEA GO_REF:0000044 UniProt GO_REF:0000044 NCBI chr12:33,024,596...33,051,399 JBrowse link
G Vps33b VPS33B, late endosome and lysosome associated located_in IEA GO_REF:0000044 UniProt GO_REF:0000044 NCBI chr 1:143,633,167...143,656,228 JBrowse link
G Vps36 vacuolar protein sorting 36 homolog located_in
is_active_in
IEA
IBA
ISO
GO_REF:0000104
GO_REF:0000033
(PMID:17010938)
UniProt
GO_Central
RGD
PMID:17010938 GO_REF:0000033 GO_REF:0000104 NCBI chr16:69,810,404...69,834,789 JBrowse link
G Vps37a VPS37A subunit of ESCRT-I located_in IEA GO_REF:0000044 UniProt GO_REF:0000044 NCBI chr16:51,736,170...51,775,384 JBrowse link
G Vps37b VPS37B subunit of ESCRT-I located_in IEA GO_REF:0000044 UniProt GO_REF:0000044 NCBI chr12:38,220,973...38,249,935 JBrowse link
G Vps37c VPS37C subunit of ESCRT-I located_in IEA GO_REF:0000044 UniProt GO_REF:0000044 NCBI chr 1:207,336,694...207,362,295 JBrowse link
G Vps37d VPS37D subunit of ESCRT-I located_in IEA GO_REF:0000044 UniProt GO_REF:0000044 NCBI chr12:21,609,210...21,614,669 JBrowse link
G Vps39 VPS39 subunit of HOPS complex located_in ISO (PMID:23167963) RGD PMID:23167963 NCBI chr 3:107,266,846...107,304,884 JBrowse link
G Vps41 VPS41 subunit of HOPS complex located_in ISO (PMID:23167963)
(PMID:31194677)
RGD PMID:23167963 PMID:31194677 NCBI chr17:50,758,732...50,923,129 JBrowse link
G Vps4a vacuolar protein sorting 4 homolog A located_in IEA GO_REF:0000044 UniProt GO_REF:0000044 NCBI chr19:34,934,999...34,948,888 JBrowse link
G Vps4b vacuolar protein sorting 4 homolog B located_in IEA GO_REF:0000044 UniProt GO_REF:0000044 NCBI chr13:22,907,105...22,932,200 JBrowse link
G Vti1a vesicle transport through interaction with t-SNAREs 1A is_active_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr 1:264,361,538...264,667,171 JBrowse link
G Vti1b vesicle transport through interaction with t-SNAREs 1B located_in
is_active_in
ISS
IBA
IEA
ISO
GO_REF:0000024
GO_REF:0000033
GO_REF:0000107
(PMID:18033301), (PMID:23217709)
UniProt
GO_Central
Ensembl
RGD
PMID:18033301 PMID:23217709 GO_REF:0000024 GO_REF:0000033 GO_REF:0000107 NCBI chr 6:97,957,700...97,976,491 JBrowse link
G Wdr81 WD repeat domain 81 located_in ISS
IEA
ISO
GO_REF:0000024
GO_REF:0000107
(PMID:26783301), (PMID:27126989), (PMID:28404643)
UniProt
Ensembl
RGD
PMID:26783301 PMID:27126989 PMID:28404643 GO_REF:0000024 GO_REF:0000107 NCBI chr10:60,281,969...60,295,374 JBrowse link
G Wdr91 WD repeat domain 91 located_in
is_active_in
ISS
IBA
ISO
GO_REF:0000024
GO_REF:0000033
(PMID:26783301), (PMID:28404643)
UniProt
GO_Central
RGD
PMID:26783301 PMID:28404643 GO_REF:0000024 GO_REF:0000033 NCBI chr 4:63,554,364...63,591,733 JBrowse link
G Yipf1 Yip1 domain family, member 1 located_in IEA GO_REF:0000044 UniProt GO_REF:0000044 NCBI chr 5:122,112,144...122,147,729 JBrowse link
G Yipf2 Yip1 domain family, member 2 located_in IEA GO_REF:0000044 UniProt GO_REF:0000044 NCBI chr 8:20,141,148...20,145,349 JBrowse link
Mon1-Ccz1 complex term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ccz1 CCZ1 homolog, vacuolar protein trafficking and biogenesis associated part_of ISO (PMID:29038162) RGD PMID:29038162 NCBI chr12:10,601,066...10,624,608 JBrowse link
G Mon1a MON1 homolog A, secretory trafficking associated part_of ISO
IBA
(PMID:29038162)
GO_REF:0000033
RGD
GO_Central
PMID:29038162 GO_REF:0000033 NCBI chr 8:108,574,272...108,593,163 JBrowse link
G Mon1b MON1 homolog B, secretory trafficking associated part_of ISO
IBA
(PMID:29038162)
GO_REF:0000033
RGD
GO_Central
PMID:29038162 GO_REF:0000033 NCBI chr19:41,617,372...41,625,347 JBrowse link
G Rmc1 regulator of MON1-CCZ1 part_of ISO
IBA
(PMID:29038162)
GO_REF:0000033
RGD
GO_Central
PMID:29038162 GO_REF:0000033 NCBI chr18:3,359,848...3,379,764 JBrowse link
multivesicular body term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G AABR07006691.1 is_active_in IBA GO_REF:0000033 GO_Central GO_REF:0000033
G Acp3 acid phosphatase 3 IDA RGD PMID:977936 RGD:2299977 NCBI chr 8:104,905,570...104,956,146 JBrowse link
G Apoe apolipoprotein E located_in IEA GO_REF:0000044 UniProt GO_REF:0000044 NCBI chr 1:88,481,889...88,485,816 JBrowse link
G Arap1 ArfGAP with RhoGAP domain, ankyrin repeat and PH domain 1 located_in IEA
ISO
GO_REF:0000107
(PMID:18939958)
Ensembl
RGD
PMID:18939958 GO_REF:0000107 NCBI chr 1:165,160,701...165,226,219 JBrowse link
G Atp13a2 ATPase cation transporting 13A2 located_in ISO (PMID:24603074), (PMID:25392495) RGD PMID:24603074 PMID:25392495 NCBI chr 5:153,292,722...153,312,143 JBrowse link
G Bace1 beta-secretase 1 located_in ISO (PMID:24612608) RGD PMID:24612608 NCBI chr 8:55,038,842...55,061,138 JBrowse link
G Bst2 bone marrow stromal cell antigen 2 part_of ISO (PMID:22072966) RGD PMID:22072966 NCBI chr16:18,216,605...18,220,979 JBrowse link
G Cd63 Cd63 molecule located_in IEA GO_REF:0000044 UniProt GO_REF:0000044 NCBI chr 7:1,909,538...1,924,937 JBrowse link
G Cd74 CD74 molecule located_in ISO (PMID:11854359) RGD PMID:11854359 NCBI chr18:54,256,757...54,266,003 JBrowse link
G Cd79a CD79a molecule located_in ISO (PMID:11854359) RGD PMID:11854359 NCBI chr 1:89,621,460...89,625,813 JBrowse link
G Chmp1a charged multivesicular body protein 1A is_active_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr19:51,238,153...51,246,433 JBrowse link
G Chmp1b2 charged multivesicular body protein 1B2 is_active_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr  X:72,860,409...72,901,232 JBrowse link
G Chmp2b charged multivesicular body protein 2B is_active_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr11:3,337,478...3,364,015 JBrowse link
G Chmp3 charged multivesicular body protein 3 is_active_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr 4:103,576,453...103,622,566 JBrowse link
G Chmp4bl1 chromatin modifying protein 4B-like 1 is_active_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr 4:68,049,742...68,050,791 JBrowse link
G Chmp4c charged multivesicular body protein 4C is_active_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr 2:91,391,729...91,428,652 JBrowse link
G Chmp5 charged multivesicular body protein 5 is_active_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr 5:60,877,369...60,894,512 JBrowse link
G Chmp6 charged multivesicular body protein 6 is_active_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr10:105,191,972...105,197,642 JBrowse link
G Chmp7 charged multivesicular body protein 7 is_active_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr15:44,790,983...44,806,216 JBrowse link
G Crhbp corticotropin releasing hormone binding protein IDA RGD PMID:10524337 RGD:5490549 NCBI chr 2:28,427,139...28,439,446 JBrowse link
G Crhr1 corticotropin releasing hormone receptor 1 IDA Purkinje cells beginning postnatal day 3 RGD PMID:12911751 RGD:1626245 NCBI chr10:89,540,192...89,583,466 JBrowse link
G Cst3 cystatin C IDA RGD PMID:10950881 RGD:2306514 NCBI chr 3:136,336,923...136,340,796 JBrowse link
G Cst7 cystatin F located_in ISO (PMID:22365146) RGD PMID:22365146 NCBI chr 3:139,396,830...139,405,557 JBrowse link
G Ctsl cathepsin L located_in ISO (PMID:22365146) RGD PMID:22365146 NCBI chr17:770,104...776,266 JBrowse link
G Ecpas Ecm29 proteasome adaptor and scaffold located_in ISO (PMID:20682791) RGD PMID:20682791 NCBI chr 5:73,601,745...73,714,026 JBrowse link
G Gfra1 GDNF family receptor alpha 1 located_in IEA GO_REF:0000044 UniProt GO_REF:0000044 NCBI chr 1:257,315,682...257,552,004 JBrowse link
G Gja1 gap junction protein, alpha 1 IDA RGD PMID:16162097 RGD:1582681 NCBI chr20:36,302,490...36,315,010 JBrowse link
G Lamp1 lysosomal-associated membrane protein 1 located_in IDA
ISO
IEA
(PMID:11854359)
GO_REF:0000107
RGD
Ensembl
PMID:11854359 PMID:7868367 GO_REF:0000107, RGD:4892636 NCBI chr16:83,058,131...83,082,843 JBrowse link
G Lrat lecithin retinol acyltransferase located_in IDA PMID:18544127 RGD
UniProt
PMID:18544127 PMID:18544127 RGD:6893660, RGD:6893660 NCBI chr 2:170,562,148...170,571,212 JBrowse link
G Mbl1 mannose binding lectin 1 is_active_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr16:17,029,146...17,035,187 JBrowse link
G Mbl2 mannose binding lectin 2 is_active_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr 1:237,429,873...237,465,567 JBrowse link
G Prkar1a protein kinase cAMP-dependent type I regulatory subunit alpha located_in ISO (PMID:21502359) RGD PMID:21502359 NCBI chr10:94,621,042...94,639,534 JBrowse link
G Prkar1b protein kinase cAMP-dependent type I regulatory subunit beta located_in ISO (PMID:21502359) RGD PMID:21502359 NCBI chr12:15,492,233...15,624,942 JBrowse link
G Rab11a RAB11a, member RAS oncogene family located_in ISO (PMID:15634213) RGD PMID:15634213 NCBI chr 8:74,118,922...74,141,760 JBrowse link
G RT1-Bb RT1 class II, locus Bb located_in ISO (PMID:11854359) RGD PMID:11854359 NCBI chr20:4,598,475...4,604,118 JBrowse link
G RT1-DMa RT1 class II, locus DMa located_in ISO (PMID:11854359) RGD PMID:11854359 NCBI chr20:4,707,028...4,710,432 JBrowse link
G Sftpa1 surfactant protein A1 is_active_in IDA
IBA
GO_REF:0000033 GO_Central
RGD
PMID:16187065 GO_REF:0000033, RGD:4143471 NCBI chr16:17,008,180...17,011,686 JBrowse link
G Sftpb surfactant protein B is_active_in IDA
IBA
GO_REF:0000033 GO_Central
RGD
PMID:16187065 GO_REF:0000033, RGD:4143471 NCBI chr 4:104,359,303...104,368,439 JBrowse link
G Sftpc surfactant protein C IDA RGD PMID:16187065 RGD:4143471 NCBI chr15:45,596,565...45,599,615 JBrowse link
G Sftpd surfactant protein D is_active_in IDA
IBA
GO_REF:0000033 GO_Central
RGD
PMID:16187065 GO_REF:0000033, RGD:4143471 NCBI chr16:17,046,491...17,058,968 JBrowse link
G Si sucrase-isomaltase IDA MMO:0000538 RGD PMID:3536655 RGD:597538472 NCBI chr 2:157,505,893...157,586,228 JBrowse link
G Slc17a8 solute carrier family 17 member 8 IDA RGD PMID:12388773 RGD:625707 NCBI chr 7:23,994,212...24,049,498 JBrowse link
G Slc2a4 solute carrier family 2 member 4 IDA RGD PMID:1881917 RGD:2306204 NCBI chr10:55,164,721...55,170,289 JBrowse link
G Sorl1 sortilin related receptor 1 located_in IDA
ISO
(PMID:21385844) RGD PMID:21385844 PMID:16452683 RGD:1581100 NCBI chr 8:51,238,713...51,401,458 JBrowse link
G Steap3 STEAP3 metalloreductase located_in ISO
IEA
(PMID:15319436)
GO_REF:0000107
RGD
Ensembl
PMID:15319436 GO_REF:0000107 NCBI chr13:33,904,710...33,950,100 JBrowse link
G Tpt1 tumor protein, translationally-controlled 1 located_in ISO (PMID:15319436) RGD PMID:15319436 NCBI chr15:51,156,728...51,159,629 JBrowse link
G Vta1 vesicle trafficking 1 is_active_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr 1:9,032,861...9,080,635 JBrowse link
G Zp2 zona pellucida glycoprotein 2 located_in IEA
ISO
ISS
GO_REF:0000107
(PMID:17047254)
GO_REF:0000024
Ensembl
RGD
UniProt
PMID:17047254 GO_REF:0000024 GO_REF:0000107 NCBI chr 1:174,513,507...174,525,288 JBrowse link
multivesicular body membrane term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Abca3 ATP binding cassette subfamily A member 3 located_in IEA GO_REF:0000044 UniProt GO_REF:0000044 NCBI chr10:13,886,948...13,944,286 JBrowse link
G Abcb6 ATP binding cassette subfamily B member 6 located_in ISS
IEA
ISO
GO_REF:0000024
GO_REF:0000044
(PMID:25627919)
UniProt
RGD
PMID:25627919 GO_REF:0000024 GO_REF:0000044 NCBI chr 9:84,117,222...84,125,939 JBrowse link
G Cd63 Cd63 molecule located_in ISS
IEA
ISO
GO_REF:0000024
GO_REF:0000107
(PMID:26280656)
UniProt
Ensembl
RGD
PMID:26280656 GO_REF:0000024 GO_REF:0000107 NCBI chr 7:1,909,538...1,924,937 JBrowse link
G Chmp1a charged multivesicular body protein 1A located_in ISO (PMID:16554368) RGD PMID:16554368 NCBI chr19:51,238,153...51,246,433 JBrowse link
G Chmp1b charged multivesicular body protein 1B located_in ISO (PMID:16554368) RGD PMID:16554368 NCBI chr18:60,740,349...60,742,879 JBrowse link
G Chmp2a charged multivesicular body protein 2A located_in ISO (PMID:16554368) RGD PMID:16554368 NCBI chr 1:73,660,045...73,662,894 JBrowse link
G Chmp2b charged multivesicular body protein 2B located_in ISO (PMID:16554368) RGD PMID:16554368 NCBI chr11:3,337,478...3,364,015 JBrowse link
G Chmp3 charged multivesicular body protein 3 located_in ISO (PMID:16554368) RGD PMID:16554368 NCBI chr 4:103,576,453...103,622,566 JBrowse link
G Chmp4b charged multivesicular body protein 4B located_in ISO (PMID:16554368) RGD PMID:16554368 NCBI chr 3:143,170,859...143,211,376 JBrowse link
G Chmp4c charged multivesicular body protein 4C located_in IEA
ISO
GO_REF:0000107
(PMID:16554368)
Ensembl
RGD
PMID:16554368 GO_REF:0000107 NCBI chr 2:91,391,729...91,428,652 JBrowse link
G Chmp5 charged multivesicular body protein 5 located_in ISO (PMID:16554368) RGD PMID:16554368 NCBI chr 5:60,877,369...60,894,512 JBrowse link
G Chmp6 charged multivesicular body protein 6 located_in ISO (PMID:16554368) RGD PMID:16554368 NCBI chr10:105,191,972...105,197,642 JBrowse link
G Chmp7 charged multivesicular body protein 7 located_in ISO (PMID:16554368) RGD PMID:16554368 NCBI chr15:44,790,983...44,806,216 JBrowse link
G Gimap5 GTPase, IMAP family member 5 located_in IEA GO_REF:0000044 UniProt GO_REF:0000044 NCBI chr 4:77,693,417...77,701,025 JBrowse link
G Hgs hepatocyte growth factor-regulated tyrosine kinase substrate located_in IEA GO_REF:0000044 UniProt GO_REF:0000044 NCBI chr10:105,739,617...105,757,838 JBrowse link
G Laptm4b lysosomal protein transmembrane 4 beta located_in ISS
IEA
ISO
GO_REF:0000024
GO_REF:0000044
(PMID:25588945), (PMID:26280656)
UniProt
RGD
PMID:25588945 PMID:26280656 GO_REF:0000024 GO_REF:0000044 NCBI chr 7:65,434,525...65,477,386 JBrowse link
G Nsg1 neuronal vesicle trafficking associated 1 located_in IEA GO_REF:0000044 UniProt GO_REF:0000044 NCBI chr14:72,648,771...72,670,521 JBrowse link
G Nsg2 neuronal vesicle trafficking associated 2 located_in ISS
ISO
GO_REF:0000024
(PMID:7829526)
UniProt
RGD
PMID:7829526 GO_REF:0000024 NCBI chr10:15,601,594...15,661,441 JBrowse link
G Pmel premelanosome protein located_in ISO (PMID:11694580) RGD PMID:11694580 NCBI chr 7:1,138,202...1,148,735 JBrowse link
G Rab27a RAB27A, member RAS oncogene family located_in ISO (PMID:19966785) RGD PMID:19966785 NCBI chr 8:82,663,373...82,717,267 JBrowse link
G Rab27b RAB27B, member RAS oncogene family located_in ISO (PMID:19966785) RGD PMID:19966785 NCBI chr18:65,870,230...66,069,597 JBrowse link
G Slc9a8 solute carrier family 9 member A8 located_in IEA
ISS
ISO
GO_REF:0000107
GO_REF:0000024
(PMID:20719963)
Ensembl
UniProt
RGD
PMID:20719963 GO_REF:0000024 GO_REF:0000107 NCBI chr 3:156,147,855...156,198,497 JBrowse link
G Sorl1 sortilin related receptor 1 located_in IEA GO_REF:0000044 UniProt GO_REF:0000044 NCBI chr 8:51,238,713...51,401,458 JBrowse link
G Tmem9 transmembrane protein 9 located_in ISO (PMID:30374053) RGD PMID:30374053 NCBI chr13:50,008,829...50,027,556 JBrowse link
multivesicular body, internal vesicle term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Apoe apolipoprotein E located_in ISO
IEA
ISS
(PMID:26387950)
GO_REF:0000107
GO_REF:0000024
RGD
Ensembl
UniProt
PMID:26387950 GO_REF:0000024 GO_REF:0000107 NCBI chr 1:88,481,889...88,485,816 JBrowse link
G Cd63 Cd63 molecule located_in ISS
ISO
IEA
GO_REF:0000024
(PMID:21962903), (PMID:26280656), (PMID:26387950)
GO_REF:0000107
UniProt
RGD
Ensembl
PMID:21962903 PMID:26280656 PMID:26387950 GO_REF:0000024 GO_REF:0000107 NCBI chr 7:1,909,538...1,924,937 JBrowse link
G Laptm4b lysosomal protein transmembrane 4 beta located_in ISS
IEA
ISO
GO_REF:0000024
GO_REF:0000107
(PMID:26280656)
UniProt
Ensembl
RGD
PMID:26280656 GO_REF:0000024 GO_REF:0000107 NCBI chr 7:65,434,525...65,477,386 JBrowse link
G Lrrk2 leucine-rich repeat kinase 2 located_in ISO (PMID:19640926) RGD PMID:19640926 NCBI chr 7:124,706,246...124,867,234 JBrowse link
G Pmel premelanosome protein located_in ISO (PMID:26387950) RGD PMID:26387950 NCBI chr 7:1,138,202...1,148,735 JBrowse link
multivesicular body, internal vesicle lumen term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Egfr epidermal growth factor receptor located_in ISO (PMID:17714434) RGD PMID:17714434 NCBI chr14:95,378,626...95,551,358 JBrowse link

Term paths to the root
Path 1
Term Annotations click to browse term
  cellular_component 21321
    cellular anatomical structure 21026
      endomembrane system 4394
        endosome 952
          late endosome 297
            Mon1-Ccz1 complex 4
            late endosome lumen + 0
            late endosome membrane + 151
            multivesicular body + 65
Path 2
Term Annotations click to browse term
  cellular_component 21321
    cellular anatomical structure 21026
      organelle 14240
        membrane-bounded organelle 12805
          vesicle 2260
            intracellular vesicle 2074
              cytoplasmic vesicle 2065
                endosome 952
                  late endosome 297
                    Mon1-Ccz1 complex 4
                    late endosome lumen + 0
                    late endosome membrane + 151
                    multivesicular body + 65
paths to the root