ONTOLOGY REPORT - ANNOTATIONS
Term: U4 snRNP
Accession: GO:0005687
browse the term
Definition: A ribonucleoprotein complex that contains small nuclear RNA U4, a heptameric ring of Sm proteins, as well as several proteins that are unique to the U4 snRNP, most of which remain associated with the U4 snRNA both while the U4 snRNP is free or assembled into the U4/U6 snRNP or into a series of spliceosomal complexes.
G
AABR07042226.1
part_of
IBA
GO_REF:0000033
GO_Central
GO_REF:0000033
Ensembl chr X:144,806,986...144,812,552
G
Ddx39b
DExD-box helicase 39B
part_of
ISO IEA
(PMID:18593880) GO_REF:0000107
RGD Ensembl
PMID:18593880
GO_REF:0000107
NCBI chr20:3,547,702...3,585,064
Ensembl chr20:3,572,056...3,584,996
G
ENSRNOG00000064062
part_of
IEA
GO_REF:0000104
UniProt
GO_REF:0000104
Ensembl chr19:33,454,456...33,455,388
G
Prpf31
pre-mRNA processing factor 31
part_of
ISO IBA
(PMID:17412961) GO_REF:0000033
RGD GO_Central
PMID:17412961
GO_REF:0000033
NCBI chr 1:65,575,887...65,587,561
Ensembl chr 1:65,575,887...65,587,873
G
Snrpb
small nuclear ribonucleoprotein polypeptides B and B1
part_of
ISS ISO IBA
GO_REF:0000024 (PMID:21516107) GO_REF:0000033
UniProt RGD GO_Central
PMID:21516107
GO_REF:0000024 GO_REF:0000033
NCBI chr 3:117,369,816...117,379,344
Ensembl chr 3:117,370,100...117,379,339
G
Snrpd1
small nuclear ribonucleoprotein D1 polypeptide
part_of
ISO IBA
(PMID:21516107) GO_REF:0000033
RGD GO_Central
PMID:21516107
GO_REF:0000033
NCBI chr18:1,696,838...1,707,400
Ensembl chr18:1,696,852...1,708,256
G
Snrpd2
small nuclear ribonucleoprotein D2 polypeptide
part_of
ISO
(PMID:21516107)
RGD
PMID:21516107
NCBI chr 1:78,798,377...78,801,227
Ensembl chr 1:78,798,377...78,803,351 Ensembl chr20:78,798,377...78,803,351
G
Snrpd3
small nuclear ribonucleoprotein D3 polypeptide
part_of
ISO IBA
(PMID:21516107) GO_REF:0000033
RGD GO_Central
PMID:21516107
GO_REF:0000033
NCBI chr20:13,130,112...13,145,947
Ensembl chr20:13,130,119...13,145,978
G
Snrpe
small nuclear ribonucleoprotein polypeptide E
part_of
ISO IBA
(PMID:21516107) GO_REF:0000033
RGD GO_Central
PMID:21516107
GO_REF:0000033
NCBI chr13:45,050,986...45,057,231
Ensembl chr13:45,050,986...45,057,310 Ensembl chr 8:45,050,986...45,057,310
G
Snrpepl2
small nuclear ribonucleoprotein polypeptide E like 2
part_of
IBA
GO_REF:0000033
GO_Central
GO_REF:0000033
NCBI chr 1:133,709,656...133,710,137
Ensembl chr 1:133,709,797...133,710,075
G
Snrpf
small nuclear ribonucleoprotein polypeptide F
part_of
ISO
(PMID:21516107)
RGD
PMID:21516107
NCBI chr 7:28,130,427...28,137,129
Ensembl chr 7:28,130,427...28,137,129
G
Snrpg
small nuclear ribonucleoprotein polypeptide G
part_of
ISO IBA
(PMID:21516107) GO_REF:0000033
RGD GO_Central
PMID:21516107
GO_REF:0000033
NCBI chr 4:118,812,278...118,819,827
Ensembl chr 4:118,812,252...118,819,826 Ensembl chr X:118,812,252...118,819,826
G
Snrpgl1
small nuclear ribonucleoprotein polypeptide G like 1
part_of
IBA
GO_REF:0000033
GO_Central
GO_REF:0000033
NCBI chr 1:87,982,629...87,983,056
Ensembl chr 1:87,982,626...87,983,118 Ensembl chr 4:87,982,626...87,983,118
G
Snrpn
small nuclear ribonucleoprotein polypeptide N
part_of
IBA
GO_REF:0000033
GO_Central
GO_REF:0000033
NCBI chr 1:111,101,327...111,123,400
Ensembl chr 1:111,101,329...111,123,634
G
Zfp341
zinc finger protein 341
part_of
IBA
GO_REF:0000033
GO_Central
GO_REF:0000033
NCBI chr 3:143,122,699...143,156,250
Ensembl chr 3:143,119,093...143,156,249
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