Send us a Message



Submit Data |  Help |  Video Tutorials |  News |  Publications |  Download |  REST API |  Citing RGD |  Contact   

ONTOLOGY REPORT - ANNOTATIONS


Term:replication fork
go back to main search page
Accession:GO:0005657 term browser browse the term
Definition:The Y-shaped region of a replicating DNA molecule, resulting from the separation of the DNA strands and in which the synthesis of new strands takes place. Also includes associated protein complexes.
Synonyms:related_synonym: replication focus
 xref: Wikipedia:Replication_fork



show annotations for term's descendants           Sort by:
replication fork term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Bcl6 BCL6, transcription repressor located_in ISO (PMID:10490843) RGD PMID:10490843 NCBI chr11:76,854,090...76,877,389
Ensembl chr11:76,854,090...76,877,389
JBrowse link
G Blm BLM RecQ like helicase located_in ISO (PMID:15364958), (PMID:26195664) RGD PMID:15364958 PMID:26195664 NCBI chr 1:134,409,832...134,496,073
Ensembl chr 1:134,409,857...134,484,312
JBrowse link
G Brip1 BRCA1 interacting helicase 1 is_active_in ISO (PMID:36608669) RGD PMID:36608669 NCBI chr10:70,907,266...71,031,502
Ensembl chr10:70,907,371...71,030,324
JBrowse link
G Chek1 checkpoint kinase 1 located_in ISO (PMID:15364958) RGD PMID:15364958 NCBI chr 8:36,420,565...36,443,477
Ensembl chr 8:36,420,569...36,441,009
JBrowse link
G Dmap1 DNA methyltransferase 1-associated protein 1 located_in ISO (PMID:10888872) RGD PMID:10888872 NCBI chr 5:131,143,726...131,151,760
Ensembl chr 5:131,143,729...131,151,742
JBrowse link
G Dnmt1 DNA methyltransferase 1 located_in IEA
ISO
GO_REF:0000107
(PMID:10888872)
Ensembl
RGD
PMID:10888872 GO_REF:0000107 NCBI chr 8:19,440,611...19,486,659
Ensembl chr 8:19,440,611...19,486,659
JBrowse link
G Donson DNA replication fork stabilization factor DONSON located_in ISO (PMID:28191891) RGD PMID:28191891 NCBI chr11:30,919,834...30,933,150
Ensembl chr11:30,923,239...30,932,889
JBrowse link
G H2ax H2A.X variant histone located_in ISO (PMID:15364958) RGD PMID:15364958 NCBI chr 8:44,671,907...44,673,262
Ensembl chr 8:44,671,786...44,673,239
JBrowse link
G Hdac2 histone deacetylase 2 located_in ISO (PMID:10888872) RGD PMID:10888872 NCBI chr20:40,548,244...40,571,609
Ensembl chr20:40,548,250...40,571,609
JBrowse link
G Hmces 5-hydroxymethylcytosine binding, ES cell specific is_active_in ISS
ISO
GO_REF:0000024
(PMID:30554877), (PMID:32492421)
UniProt
RGD
PMID:30554877 PMID:32492421 GO_REF:0000024 NCBI chr 4:120,392,812...120,415,616
Ensembl chr 4:120,366,542...120,415,616
JBrowse link
G Mre11 MRE11 homolog, double strand break repair nuclease located_in ISO
IEA
ISS
(PMID:29290612)
GO_REF:0000107
GO_REF:0000024
RGD
Ensembl
UniProt
PMID:29290612 GO_REF:0000024 GO_REF:0000107 NCBI chr 8:11,618,876...11,680,451
Ensembl chr 8:11,632,354...11,678,279
JBrowse link
G Mus81 MUS81 structure-specific endonuclease subunit is_active_in
located_in
ISO
IEA
(PMID:28575661)
GO_REF:0000107
RGD
Ensembl
PMID:28575661 GO_REF:0000107 NCBI chr 1:202,790,295...202,796,008
Ensembl chr 1:202,790,466...202,795,843
JBrowse link
G Nbn nibrin located_in IEA
ISO
GO_REF:0000107
(PMID:11934988)
Ensembl
RGD
PMID:11934988 GO_REF:0000107 NCBI chr 5:29,459,574...29,494,152
Ensembl chr 5:29,459,457...29,494,150
JBrowse link
G Pcna proliferating cell nuclear antigen located_in ISO (PMID:9774970)
(PMID:11934988)
RGD PMID:9774970 PMID:11934988 NCBI chr 3:119,499,039...119,502,911
Ensembl chr 3:119,498,810...119,502,995
JBrowse link
G Pif1 PIF1 5'-to-3' DNA helicase is_active_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr 8:66,110,641...66,120,202
Ensembl chr 8:66,111,072...66,120,200
JBrowse link
G Polh DNA polymerase eta is_active_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr 9:14,778,355...14,813,210
Ensembl chr 9:14,777,888...14,812,723
JBrowse link
G Primpol primase and DNA directed polymerase located_in ISO (PMID:28534480) RGD PMID:28534480 NCBI chr16:45,681,252...45,715,758
Ensembl chr16:45,681,326...45,715,565
JBrowse link
G Rad18 RAD18 E3 ubiquitin protein ligase located_in ISO (PMID:18363965) RGD PMID:18363965 NCBI chr 4:145,735,654...145,821,102
Ensembl chr 4:145,735,654...145,821,069
JBrowse link
G Rad51b RAD51 paralog B located_in
is_active_in
ISO
IBA
(PMID:20207730)
GO_REF:0000033
RGD
GO_Central
PMID:20207730 GO_REF:0000033 NCBI chr 6:98,096,525...98,640,988
Ensembl chr 6:98,098,868...98,640,979
JBrowse link
G Rad51c RAD51 paralog C located_in
is_active_in
ISO
IBA
(PMID:20207730)
GO_REF:0000033
RGD
GO_Central
PMID:20207730 GO_REF:0000033 NCBI chr10:72,205,032...72,231,643
Ensembl chr10:72,205,032...72,231,248
JBrowse link
G Rad51d RAD51 paralog D located_in
is_active_in
ISO
IBA
(PMID:20207730)
GO_REF:0000033
RGD
GO_Central
PMID:20207730 GO_REF:0000033 NCBI chr10:67,805,720...67,824,452
Ensembl chr10:67,740,712...67,824,434
JBrowse link
G Radx RPA1 related single stranded DNA binding protein, X-linked located_in
is_active_in
ISO
IBA
IEA
ISS
(PMID:28735897)
GO_REF:0000033
GO_REF:0000107
GO_REF:0000024
RGD
GO_Central
Ensembl
UniProt
PMID:28735897 GO_REF:0000024 GO_REF:0000033 GO_REF:0000107 NCBI chr  X:103,089,284...103,176,840
Ensembl chr  X:103,089,284...103,176,838
JBrowse link
G Recql5 RecQ like helicase 5 is_active_in ISO (PMID:18003859) RGD PMID:18003859 NCBI chr10:101,126,544...101,165,739
Ensembl chr10:101,126,547...101,165,652
JBrowse link
G Rffl ring finger and FYVE-like domain containing E3 ubiquitin protein ligase is_active_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr10:67,740,711...67,803,669
Ensembl chr10:67,740,712...67,824,434
JBrowse link
G Rtfdc1 replication termination factor 2 domain containing 1 located_in ISS
ISO
GO_REF:0000024
(PMID:29290612)
UniProt
RGD
PMID:29290612 GO_REF:0000024 NCBI chr 3:161,208,005...161,237,687
Ensembl chr 3:161,208,049...161,237,687
JBrowse link
G Tex264 testis expressed 264 located_in
is_active_in
ISO
IBA
(PMID:32152270)
GO_REF:0000033
RGD
GO_Central
PMID:32152270 GO_REF:0000033 NCBI chr 8:107,295,806...107,322,858
Ensembl chr 8:107,295,806...107,323,232
JBrowse link
G Tp53 tumor protein p53 located_in IEA
ISO
GO_REF:0000107
(PMID:15364958)
Ensembl
RGD
PMID:15364958 GO_REF:0000107 NCBI chr10:54,300,070...54,311,525
Ensembl chr10:54,300,048...54,311,524
JBrowse link
G Tp53bp1 tumor protein p53 binding protein 1 located_in ISO (PMID:15364958) RGD PMID:15364958 NCBI chr 3:108,166,574...108,270,229
Ensembl chr 3:108,169,980...108,269,822
JBrowse link
G Ube2b ubiquitin-conjugating enzyme E2B located_in ISO
IEA
(PMID:18363965)
GO_REF:0000107
RGD
Ensembl
PMID:18363965 GO_REF:0000107 NCBI chr10:36,248,434...36,263,379
Ensembl chr10:36,248,438...36,264,665
JBrowse link
G Uhrf1 ubiquitin-like with PHD and ring finger domains 1 located_in IEA
ISO
ISS
GO_REF:0000107
(PMID:17994007)
GO_REF:0000024
(PMID:17673620)
Ensembl
RGD
UniProt
PMID:17673620 PMID:17994007 GO_REF:0000024 GO_REF:0000107 NCBI chr 9:1,133,117...1,154,639
Ensembl chr 9:1,134,909...1,154,631
JBrowse link
G Wrn WRN RecQ like helicase located_in ISO (PMID:26195664) RGD PMID:26195664 NCBI chr16:58,763,517...58,898,604
Ensembl chr16:58,763,504...58,895,450
JBrowse link
G Xrcc2 X-ray repair cross complementing 2 located_in
is_active_in
ISO
IBA
(PMID:20207730)
GO_REF:0000033
RGD
GO_Central
PMID:20207730 GO_REF:0000033 NCBI chr 4:9,423,873...9,502,980
Ensembl chr 4:9,423,898...9,442,482
JBrowse link
G Xrcc3 X-ray repair cross complementing 3 located_in
is_active_in
ISO
IBA
(PMID:20207730)
GO_REF:0000033
RGD
GO_Central
PMID:20207730 GO_REF:0000033 NCBI chr 6:130,863,405...130,873,765
Ensembl chr 6:130,863,959...130,872,444
JBrowse link
alpha DNA polymerase:primase complex term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Pola1 DNA polymerase alpha 1, catalytic subunit part_of IDA
ISO
IBA
IEA
ISS
IC
(PMID:10523676), (PMID:8026492), (PMID:9584195)
GO_REF:0000114
GO_REF:0000033
(PMID:2175912), (PMID:22465957), (PMID:26975377), (PMID:8026492)
GO_REF:0000107
GO_REF:0000024
RGD
ComplexPortal
GO_Central
Ensembl
UniProt
PMID:2175912 PMID:8026492 PMID:9584195 PMID:10523676 PMID:22465957 More... GO_REF:0000024 GO_REF:0000033 GO_REF:0000107 GO_REF:0000114, RGD:1580605, RGD:2307013 NCBI chr  X:58,034,617...58,348,612
Ensembl chr  X:58,034,619...58,348,536
JBrowse link
G Pola2 DNA polymerase alpha 2, accessory subunit part_of TAS
ISO
IBA
IEA
ISS
IC
(PMID:10523676), (PMID:8026492), (PMID:9584195)
GO_REF:0000114
GO_REF:0000033
GO_REF:0000107
GO_REF:0000024
(PMID:22465957), (PMID:26975377), (PMID:8026492)
RGD
ComplexPortal
GO_Central
Ensembl
UniProt
PMID:8026492 PMID:9584195 PMID:10523676 PMID:22465957 PMID:26975377 More... GO_REF:0000024 GO_REF:0000033 GO_REF:0000107 GO_REF:0000114, RGD:633584, RGD:2307013 NCBI chr 1:203,227,183...203,251,350
Ensembl chr 1:203,203,388...203,251,348
JBrowse link
G Prim1 DNA primase subunit 1 part_of ISO (PMID:26975377), (PMID:8026492)
(PMID:10523676), (PMID:8026492)
RGD PMID:8026492 PMID:10523676 PMID:26975377 NCBI chr 7:446,342...462,526
Ensembl chr 7:431,805...462,526
JBrowse link
G Prim2 DNA primase subunit 2 part_of ISO
IBA
IEA
ISS
(PMID:26975377), (PMID:8026492)
GO_REF:0000033
(PMID:10523676), (PMID:8026492)
GO_REF:0000114
GO_REF:0000117
GO_REF:0000024
RGD
GO_Central
ComplexPortal
UniProt
PMID:8026492 PMID:10523676 PMID:26975377 GO_REF:0000024 GO_REF:0000033 GO_REF:0000114 GO_REF:0000117 NCBI chr 9:35,692,376...35,904,521
Ensembl chr 9:35,692,376...35,903,030
JBrowse link
delta DNA polymerase complex term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Pold1 DNA polymerase delta 1, catalytic subunit part_of IC
ISO
IBA
IEA
IDA
(PMID:11595739)
(PMID:11595739), (PMID:12403614), (PMID:22465957)
GO_REF:0000114
GO_REF:0000033
GO_REF:0000117
RGD
ComplexPortal
GO_Central
UniProt
PMID:11595739 PMID:12403614 PMID:22465957 PMID:7503737 PMID:10541966 GO_REF:0000033 GO_REF:0000114 GO_REF:0000117, RGD:2307013, RGD:729526 NCBI chr 1:95,025,462...95,041,559
Ensembl chr 1:95,025,499...95,036,465
JBrowse link
G Pold2 DNA polymerase delta 2, accessory subunit part_of IC
ISO
IBA
IEA
IDA
(PMID:11595739)
(PMID:11595739), (PMID:12403614), (PMID:22465957)
GO_REF:0000114
GO_REF:0000033
GO_REF:0000117
RGD
ComplexPortal
GO_Central
UniProt
PMID:11595739 PMID:12403614 PMID:22465957 PMID:7503737 PMID:10541966 GO_REF:0000033 GO_REF:0000114 GO_REF:0000117, RGD:2307013, RGD:729526 NCBI chr14:80,748,971...80,755,188
Ensembl chr14:80,748,974...80,755,160
JBrowse link
G Pold3 DNA polymerase delta 3, accessory subunit part_of IC
IBA
ISO
GO_REF:0000033
GO_REF:0000114
(PMID:11595739), (PMID:12403614), (PMID:22465957)
GO_Central
ComplexPortal
RGD
PMID:11595739 PMID:12403614 PMID:22465957 PMID:7503737 GO_REF:0000033 GO_REF:0000114, RGD:2307013 NCBI chr 1:154,417,893...154,456,687
Ensembl chr 1:154,418,084...154,456,665
JBrowse link
G Pold4 DNA polymerase delta 4, accessory subunit part_of IC
ISO
IBA
(PMID:12403614)
GO_REF:0000114
GO_REF:0000033
RGD
ComplexPortal
GO_Central
PMID:12403614 PMID:7503737 GO_REF:0000033 GO_REF:0000114, RGD:2307013 NCBI chr 1:201,526,591...201,528,406
Ensembl chr 1:201,526,665...201,528,401
JBrowse link
DNA replication factor A complex term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Bcas2 BCAS2, pre-mRNA processing factor located_in ISO (PMID:24332808) RGD PMID:24332808 NCBI chr 2:190,692,503...190,700,386
Ensembl chr 2:190,692,461...190,700,389
JBrowse link
G Cdc5l cell division cycle 5-like part_of
located_in
IEA
ISO
ISS
GO_REF:0000107
(PMID:24332808)
GO_REF:0000024
Ensembl
RGD
UniProt
PMID:24332808 GO_REF:0000024 GO_REF:0000107 NCBI chr 9:15,564,949...15,603,453
Ensembl chr 9:15,564,767...15,603,450
JBrowse link
G Ercc5 ERCC excision repair 5, endonuclease located_in ISO (PMID:7700386) RGD PMID:7700386 NCBI chr 9:46,309,477...46,354,478
Ensembl chr 9:46,309,389...46,354,472
JBrowse link
G Helb DNA helicase B located_in ISO (PMID:26774285) RGD PMID:26774285 NCBI chr 7:55,588,510...55,615,979
Ensembl chr 7:55,588,798...55,615,585
JBrowse link
G Plrg1 pleiotropic regulator 1 part_of
located_in
IEA
ISO
ISS
GO_REF:0000107
(PMID:24332808)
GO_REF:0000024
Ensembl
RGD
UniProt
PMID:24332808 GO_REF:0000024 GO_REF:0000107 NCBI chr 2:168,408,139...168,424,470
Ensembl chr 2:168,408,124...168,424,522
JBrowse link
G Prpf19 pre-mRNA processing factor 19 part_of
located_in
IEA
ISO
ISS
GO_REF:0000107
(PMID:24332808)
GO_REF:0000024
Ensembl
RGD
UniProt
PMID:24332808 GO_REF:0000024 GO_REF:0000107 NCBI chr 1:207,541,582...207,552,664
Ensembl chr 1:207,541,595...207,552,662
JBrowse link
G Rpa1 replication protein A1 part_of IDA
ISO
IBA
(PMID:11927569), (PMID:27723717), (PMID:27723720), (PMID:7760808)
GO_REF:0000033
RGD
GO_Central
PMID:7760808 PMID:11927569 PMID:27723717 PMID:27723720 PMID:8463251 More... GO_REF:0000033, RGD:2307012, RGD:2307013 NCBI chr10:60,148,869...60,199,970
Ensembl chr10:60,148,793...60,199,949
JBrowse link
G Rpa2 replication protein A2 part_of IDA
IBA
ISO
GO_REF:0000033
(PMID:11927569), (PMID:2406247), (PMID:27723717), (PMID:27723720)
GO_Central
RGD
PMID:2406247 PMID:11927569 PMID:27723717 PMID:27723720 PMID:8463251 More... GO_REF:0000033, RGD:2307012, RGD:2307013 NCBI chr 5:144,976,789...144,989,445
Ensembl chr 5:144,976,748...144,987,350
JBrowse link
G Rpa3 replication protein A3 part_of IDA
ISO
IBA
(PMID:11927569), (PMID:7760808)
GO_REF:0000033
RGD
GO_Central
PMID:7760808 PMID:11927569 PMID:7503737 GO_REF:0000033, RGD:2307013 NCBI chr 4:36,304,649...36,307,755
Ensembl chr 4:36,304,651...36,307,709
JBrowse link
G Rpa3l1 replication protein A3 like 1 part_of IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr12:45,908,653...45,909,063
Ensembl chr12:45,908,683...45,909,048
JBrowse link
G Smarcal1 Swi/SNF related matrix associated, actin dependent regulator of chromatin, subfamily a-like 1 located_in ISS
ISO
GO_REF:0000024
(PMID:19793862), (PMID:19793863)
UniProt
RGD
PMID:19793862 PMID:19793863 GO_REF:0000024 NCBI chr 9:74,239,718...74,286,156
Ensembl chr 9:74,240,241...74,286,146
JBrowse link
G Tonsl tonsoku-like, DNA repair protein located_in ISS
ISO
GO_REF:0000024
(PMID:21055983)
UniProt
RGD
PMID:21055983 GO_REF:0000024 NCBI chr 7:108,345,704...108,360,792
Ensembl chr 7:108,346,047...108,360,750
JBrowse link
G Xpa XPA, DNA damage recognition and repair factor located_in ISO (PMID:7700386) RGD PMID:7700386 NCBI chr 5:60,431,673...60,475,726
Ensembl chr 5:60,431,673...60,475,726
JBrowse link
DNA replication factor C complex term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Rfc1 replication factor C subunit 1 part_of ISO (PMID:9488738) RGD PMID:9488738 NCBI chr14:42,966,279...43,041,372
Ensembl chr14:42,966,324...43,041,370
JBrowse link
G Rfc2 replication factor C subunit 2 part_of ISO
IBA
(PMID:9488738)
GO_REF:0000033
RGD
GO_Central
PMID:9488738 GO_REF:0000033 NCBI chr12:22,120,449...22,133,576
Ensembl chr12:22,120,010...22,133,557
JBrowse link
G Rfc3 replication factor C subunit 3 part_of ISO
IBA
(PMID:9488738)
GO_REF:0000033
RGD
GO_Central
PMID:9488738 GO_REF:0000033 NCBI chr12:1,000,987...1,011,778
Ensembl chr12:1,000,994...1,011,778
JBrowse link
G Rfc4 replication factor C subunit 4 part_of ISO
IBA
(PMID:9488738)
GO_REF:0000033
RGD
GO_Central
PMID:9488738 GO_REF:0000033 NCBI chr11:77,749,642...77,764,123
Ensembl chr11:77,749,638...77,764,122
JBrowse link
G Rfc5 replication factor C subunit 5 part_of ISO
IBA
(PMID:9488738)
GO_REF:0000033
RGD
GO_Central
PMID:9488738 GO_REF:0000033 NCBI chr12:39,207,484...39,217,041
Ensembl chr12:39,207,484...39,217,312
JBrowse link
nuclear replication fork term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Baz1b bromodomain adjacent to zinc finger domain, 1B located_in ISO (PMID:15543136) RGD PMID:15543136 NCBI chr12:21,431,985...21,489,956
Ensembl chr12:21,431,985...21,490,426
JBrowse link
G Carm1 coactivator-associated arginine methyltransferase 1 is_active_in ISS
ISO
GO_REF:0000024
(PMID:33412112)
UniProt
RGD
PMID:33412112 GO_REF:0000024 NCBI chr 8:20,097,262...20,141,950
Ensembl chr 8:20,097,254...20,147,689
JBrowse link
G Etaa1 ETAA1 activator of ATR kinase located_in
is_active_in
ISO
IBA
(PMID:27723717), (PMID:27723720)
GO_REF:0000033
RGD
GO_Central
PMID:27723717 PMID:27723720 GO_REF:0000033 NCBI chr14:92,298,461...92,314,044
Ensembl chr14:92,299,553...92,314,104
JBrowse link
G LOC134486336 ewing's tumor-associated antigen 1 homolog is_active_in IBA GO_REF:0000033 GO_Central GO_REF:0000033
G Mcm10 minichromosome maintenance 10 replication initiation factor is_active_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr17:73,263,788...73,288,346
Ensembl chr17:73,266,095...73,287,364
JBrowse link
G Mms22l MMS22-like, DNA repair protein located_in
is_active_in
ISO
IBA
(PMID:21055983), (PMID:21055984)
GO_REF:0000033
(PMID:27797818)
RGD
GO_Central
PMID:21055983 PMID:21055984 PMID:27797818 GO_REF:0000033 NCBI chr 5:38,197,707...38,313,745
Ensembl chr 5:38,197,779...38,313,745
JBrowse link
G Parp1 poly (ADP-ribose) polymerase 1 is_active_in ISO
ISS
(PMID:33412112)
GO_REF:0000024
RGD
UniProt
PMID:33412112 GO_REF:0000024 NCBI chr13:92,307,593...92,339,406
Ensembl chr13:92,307,586...92,339,404
JBrowse link
G Pcna proliferating cell nuclear antigen located_in ISO (PMID:15543136), (PMID:21383955) RGD PMID:15543136 PMID:21383955 NCBI chr 3:119,499,039...119,502,911
Ensembl chr 3:119,498,810...119,502,995
JBrowse link
G Smarca5 SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 5 located_in ISO (PMID:15543136) RGD PMID:15543136 NCBI chr19:27,271,918...27,304,594
Ensembl chr19:27,271,148...27,304,594
JBrowse link
G Smarcad1 SWI/SNF-related, matrix-associated actin-dependent regulator of chromatin, subfamily a, containing DEAD/H box 1` located_in ISO (PMID:21549307) RGD PMID:21549307 NCBI chr 4:94,311,441...94,379,184
Ensembl chr 4:94,311,489...94,372,563
JBrowse link
G Smarcal1 Swi/SNF related matrix associated, actin dependent regulator of chromatin, subfamily a-like 1 is_active_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr 9:74,239,718...74,286,156
Ensembl chr 9:74,240,241...74,286,146
JBrowse link
G Tonsl tonsoku-like, DNA repair protein located_in
is_active_in
ISS
IBA
ISO
GO_REF:0000024
GO_REF:0000033
(PMID:26527279), (PMID:29478807)
(PMID:21055983), (PMID:21055984)
UniProt
GO_Central
RGD
PMID:21055983 PMID:21055984 PMID:26527279 PMID:29478807 GO_REF:0000024 GO_REF:0000033 NCBI chr 7:108,345,704...108,360,792
Ensembl chr 7:108,346,047...108,360,750
JBrowse link
G Trex1 three prime repair exonuclease 1 located_in ISO (PMID:18045533) RGD PMID:18045533 NCBI chr 8:109,706,613...109,707,913
Ensembl chr 8:109,706,613...109,708,796
JBrowse link
G Wdhd1 WD repeat and HMG-box DNA binding protein 1 is_active_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr15:20,478,310...20,523,106
Ensembl chr15:20,489,291...20,523,096
JBrowse link
G Zmiz2 zinc finger, MIZ-type containing 2 located_in ISO (PMID:16051670) RGD PMID:16051670 NCBI chr14:81,251,391...81,267,936
Ensembl chr14:81,251,417...81,267,936
JBrowse link
G Zranb3 zinc finger RANBP2-type containing 3 located_in
is_active_in
ISO
IBA
(PMID:22704558), (PMID:22705370), (PMID:22759634)
GO_REF:0000033
RGD
GO_Central
PMID:22704558 PMID:22705370 PMID:22759634 GO_REF:0000033 NCBI chr13:39,440,653...39,595,782
Ensembl chr13:39,440,889...39,595,670
JBrowse link
replication fork protection complex term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G LOC120094818 TIMELESS-interacting protein-like part_of IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr 9:113,693,252...113,694,434
Ensembl chr 8:64,780,828...64,801,352
JBrowse link
G Timeless timeless circadian regulator part_of IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr 7:654,804...678,769
Ensembl chr 7:654,822...678,738
JBrowse link
G Tipin timeless interacting protein part_of IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr 8:64,780,813...64,801,358
Ensembl chr 8:64,780,828...64,801,352
JBrowse link
G Tipinl1 TIMELESS interacting protein like 1 part_of IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr 9:113,542,841...113,544,022
Ensembl chr 9:113,543,173...113,605,998
JBrowse link
replisome term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Donson DNA replication fork stabilization factor DONSON part_of ISO (PMID:28191891) RGD PMID:28191891 NCBI chr11:30,919,834...30,933,150
Ensembl chr11:30,923,239...30,932,889
JBrowse link

Term paths to the root
Path 1
Term Annotations click to browse term
  cellular_component 20969
    cellular anatomical structure 20770
      replication fork 76
        DNA replication factor C complex + 5
        cytoplasmic replication fork + 0
        nuclear replication fork + 39
        replisome + 22
Path 2
Term Annotations click to browse term
  cellular_component 20969
    cellular anatomical structure 20770
      organelle 14065
        non-membrane-bounded organelle 5290
          intracellular non-membrane-bounded organelle 5290
            chromosome 1394
              replication fork 76
                DNA replication factor C complex + 5
                cytoplasmic replication fork + 0
                nuclear replication fork + 39
                replisome + 22
paths to the root