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ONTOLOGY REPORT - ANNOTATIONS

Term:extracellular matrix structural constituent
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Accession:GO:0005201 term browser browse the term
Definition:The action of a molecule that contributes to the structural integrity of the extracellular matrix.
Comment:Extracellular matrix glycoproteins may be annotated to this term. PMID:24443019
Synonyms:narrow_synonym: extracellular matrix glycoprotein
 broad_synonym: core extracellular matrix;   core matrisome

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extracellular matrix structural constituent term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Angptl1 angiopoietin like 1 enables IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004936481:10,048,439...10,071,035
Ensembl chrNW_004936481:10,048,475...10,071,134 		JBrowse link
G Col11a1 collagen type XI alpha 1 chain enables IEA InterPro GO_REF:0000002 NCBI chrNW_004936730:466,912...680,823
Ensembl chrNW_004936730:468,039...680,753 		JBrowse link
G Col11a2 collagen type XI alpha 2 chain enables IEA InterPro GO_REF:0000002 NCBI chrNW_004936476:25,663,563...25,692,315
Ensembl chrNW_004936476:25,663,755...25,691,344 		JBrowse link
G Col1a1 collagen type I alpha 1 chain enables IEA Ensembl
InterPro		 GO_REF:0000002 GO_REF:0000107 NCBI chrNW_004936490:11,448,552...11,465,836
Ensembl chrNW_004936490:11,448,654...11,464,444 		JBrowse link
G Col1a2 collagen type I alpha 2 chain enables IEA InterPro GO_REF:0000002 NCBI chrNW_004936585:5,650,322...5,686,393
Ensembl chrNW_004936585:5,651,180...5,685,923 		JBrowse link
G Col24a1 collagen type XXIV alpha 1 chain enables IEA InterPro GO_REF:0000002 NCBI chrNW_004936865:473,968...814,756
Ensembl chrNW_004936865:474,340...814,819 		JBrowse link
G Col27a1 collagen type XXVII alpha 1 chain enables IEA InterPro GO_REF:0000002 NCBI chrNW_004936487:3,487,776...3,601,779 JBrowse link
G Col2a1 collagen type II alpha 1 chain enables IEA InterPro GO_REF:0000002 NCBI chrNW_004936512:5,861,933...5,894,898
Ensembl chrNW_004936512:5,861,933...5,892,853 		JBrowse link
G Col3a1 collagen type III alpha 1 chain enables IEA InterPro
Ensembl		 GO_REF:0000002 GO_REF:0000107 NCBI chrNW_004936506:8,886,494...8,923,921
Ensembl chrNW_004936506:8,886,494...8,923,930 		JBrowse link
G Col4a1 collagen type IV alpha 1 chain enables IEA Ensembl
InterPro		 GO_REF:0000002 GO_REF:0000107 NCBI chrNW_004936472:2,416,043...2,543,561
Ensembl chrNW_004936472:2,416,566...2,542,814 		JBrowse link
G Col4a2 collagen type IV alpha 2 chain enables IEA InterPro GO_REF:0000002 NCBI chrNW_004936472:2,270,836...2,416,324
Ensembl chrNW_004936472:2,270,819...2,416,349 		JBrowse link
G Col4a4 collagen type IV alpha 4 chain enables IEA Ensembl
InterPro		 GO_REF:0000002 GO_REF:0000107 NCBI chrNW_004936525:8,788,753...8,899,671
Ensembl chrNW_004936525:8,795,436...8,899,149 		JBrowse link
G Col4a5 collagen type IV alpha 5 chain enables IEA InterPro GO_REF:0000002 NCBI chrNW_004936499:6,143,736...6,360,565
Ensembl chrNW_004936499:6,144,857...6,360,368 		JBrowse link
G Col4a6 collagen type IV alpha 6 chain enables IEA InterPro
Ensembl		 GO_REF:0000002 GO_REF:0000107 NCBI chrNW_004936499:6,421,930...6,640,429
Ensembl chrNW_004936499:6,362,295...6,639,047 		JBrowse link
G Col5a1 collagen type V alpha 1 chain enables IEA Ensembl
InterPro		 GO_REF:0000002 GO_REF:0000107 NCBI chrNW_004936669:2,474,381...2,613,541
Ensembl chrNW_004936669:2,476,818...2,580,891 		JBrowse link
G Col5a2 collagen type V alpha 2 chain enables IEA InterPro GO_REF:0000002 NCBI chrNW_004936506:8,739,475...8,873,073
Ensembl chrNW_004936506:8,822,517...8,870,836 		JBrowse link
G Col5a3 collagen type V alpha 3 chain enables IEA InterPro GO_REF:0000002 NCBI chrNW_004936659:401,834...437,896
Ensembl chrNW_004936659:402,637...437,697 		JBrowse link
G Comp cartilage oligomeric matrix protein ISO RGD PMID:12225811 RGD:1298778 NCBI chrNW_004936596:2,544,389...2,551,155
Ensembl chrNW_004936596:2,544,389...2,551,164 		JBrowse link
G Fbln1 fibulin 1 enables IEA Ensembl GO_REF:0000107 NCBI chrNW_004936629:4,170,186...4,242,100
Ensembl chrNW_004936629:4,170,817...4,242,103 		JBrowse link
G Fbn1 fibrillin 1 enables IEA Ensembl GO_REF:0000107 NCBI chrNW_004936471:10,747,030...10,969,223
Ensembl chrNW_004936471:10,746,996...10,969,231 		JBrowse link
G Fga fibrinogen alpha chain enables IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004936576:1,322,406...1,329,743 JBrowse link
G Fgb fibrinogen beta chain enables IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004936576:1,306,076...1,313,485
Ensembl chrNW_004936576:1,306,109...1,313,386 		JBrowse link
G Fgg fibrinogen gamma chain enables IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004936576:1,343,657...1,352,085
Ensembl chrNW_004936576:1,343,661...1,352,143 		JBrowse link
G Fgl1 fibrinogen like 1 enables IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004936614:431,537...452,174
Ensembl chrNW_004936614:431,631...450,034 		JBrowse link
G Fgl2 fibrinogen like 2 enables IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004936479:20,619,955...20,625,416
Ensembl chrNW_004936479:20,619,931...20,652,981 		JBrowse link
G Fn1 fibronectin 1 enables IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004936586:1,708,803...1,773,372
Ensembl chrNW_004936586:1,708,684...1,773,383 		JBrowse link
G Lama1 laminin subunit alpha 1 enables IEA Ensembl GO_REF:0000107 NCBI chrNW_004936670:359,343...511,126
Ensembl chrNW_004936670:359,582...484,539 		JBrowse link
G Lama2 laminin subunit alpha 2 enables IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004936639:259,662...825,170
Ensembl chrNW_004936639:259,889...825,065 		JBrowse link
G Lamb1 laminin subunit beta 1 enables IEA Ensembl GO_REF:0000107 NCBI chrNW_004936479:16,177,200...16,245,268
Ensembl chrNW_004936479:16,177,158...16,247,165 		JBrowse link
G Lamc1 laminin subunit gamma 1 enables IEA Ensembl GO_REF:0000107 NCBI chrNW_004936481:6,675,620...6,783,184
Ensembl chrNW_004936481:6,673,488...6,783,191 		JBrowse link
G LOC101971816 laminin subunit alpha-3 enables IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004936550:3,121,163...3,357,517
Ensembl chrNW_004936550:3,122,089...3,355,319 		JBrowse link
G LOC101975324 tubulin-specific chaperone cofactor E-like protein enables IEA TreeGrafter
Ensembl		 GO_REF:0000107 GO_REF:0000118 NCBI chrNW_004936542:5,884,624...5,951,260
Ensembl chrNW_004936542:5,884,624...5,951,260
Ensembl chrNW_004936542:5,884,624...5,951,260 		JBrowse link
G Muc2 mucin 2, oligomeric mucus/gel-forming enables ISO (PMID:35337837) UniProt PMID:35337837 NCBI chrNW_004936816:60,499...91,628
Ensembl chrNW_004936816:60,499...91,628 		JBrowse link
G Pxdn peroxidasin enables IEA Ensembl GO_REF:0000107 NCBI chrNW_004936532:462,507...543,549
Ensembl chrNW_004936532:462,429...543,555 		JBrowse link
G Tectb tectorin beta enables IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004936486:2,852,015...2,883,265
Ensembl chrNW_004936486:2,852,016...2,883,265 		JBrowse link
extracellular matrix constituent conferring elasticity term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Eln elastin enables ISO (PMID:20576933) RGD
BHF-UCL		 PMID:10090127 PMID:20576933 RGD:731206 NCBI chrNW_004936543:3,135,169...3,165,023 JBrowse link
G Emilin1 elastin microfibril interfacer 1 enables IEA TreeGrafter
Ensembl		 GO_REF:0000107 GO_REF:0000118 NCBI chrNW_004936493:5,455,369...5,463,205
Ensembl chrNW_004936493:5,455,197...5,463,223 		JBrowse link
extracellular matrix structural constituent conferring tensile strength term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Col11a1 collagen type XI alpha 1 chain enables IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004936730:466,912...680,823
Ensembl chrNW_004936730:468,039...680,753 		JBrowse link
G Col11a2 collagen type XI alpha 2 chain enables IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004936476:25,663,563...25,692,315
Ensembl chrNW_004936476:25,663,755...25,691,344 		JBrowse link
G Col15a1 collagen type XV alpha 1 chain enables IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004936524:7,481,541...7,591,452
Ensembl chrNW_004936524:7,481,761...7,590,544 		JBrowse link
G Col17a1 collagen type XVII alpha 1 chain enables IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004936600:2,084,854...2,133,028
Ensembl chrNW_004936600:2,091,150...2,132,173 		JBrowse link
G Col18a1 collagen type XVIII alpha 1 chain enables IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004936778:847,473...943,038 JBrowse link
G Col1a1 collagen type I alpha 1 chain enables IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004936490:11,448,552...11,465,836
Ensembl chrNW_004936490:11,448,654...11,464,444 		JBrowse link
G Col22a1 collagen type XXII alpha 1 chain enables IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004936470:11,762,312...11,994,041 JBrowse link
G Col2a1 collagen type II alpha 1 chain enables IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004936512:5,861,933...5,894,898
Ensembl chrNW_004936512:5,861,933...5,892,853 		JBrowse link
G Col3a1 collagen type III alpha 1 chain enables IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004936506:8,886,494...8,923,921
Ensembl chrNW_004936506:8,886,494...8,923,930 		JBrowse link
G Col4a1 collagen type IV alpha 1 chain enables IEA Ensembl
TreeGrafter		 GO_REF:0000107 GO_REF:0000118 NCBI chrNW_004936472:2,416,043...2,543,561
Ensembl chrNW_004936472:2,416,566...2,542,814 		JBrowse link
G Col4a2 collagen type IV alpha 2 chain enables IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004936472:2,270,836...2,416,324
Ensembl chrNW_004936472:2,270,819...2,416,349 		JBrowse link
G Col4a4 collagen type IV alpha 4 chain enables IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004936525:8,788,753...8,899,671
Ensembl chrNW_004936525:8,795,436...8,899,149 		JBrowse link
G Col4a5 collagen type IV alpha 5 chain enables IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004936499:6,143,736...6,360,565
Ensembl chrNW_004936499:6,144,857...6,360,368 		JBrowse link
G Col4a6 collagen type IV alpha 6 chain enables IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004936499:6,421,930...6,640,429
Ensembl chrNW_004936499:6,362,295...6,639,047 		JBrowse link
G Col5a1 collagen type V alpha 1 chain enables IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004936669:2,474,381...2,613,541
Ensembl chrNW_004936669:2,476,818...2,580,891 		JBrowse link
G Col5a2 collagen type V alpha 2 chain enables IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004936506:8,739,475...8,873,073
Ensembl chrNW_004936506:8,822,517...8,870,836 		JBrowse link
G Col8a2 collagen type VIII alpha 2 chain enables IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004936474:18,587,451...18,602,446
Ensembl chrNW_004936474:18,589,363...18,602,583 		JBrowse link
G Col9a1 collagen type IX alpha 1 chain enables IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004936618:2,176,328...2,260,000
Ensembl chrNW_004936618:2,176,240...2,260,000 		JBrowse link
G Col9a2 collagen type IX alpha 2 chain enables IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004936474:22,081,672...22,095,997
Ensembl chrNW_004936474:22,081,858...22,095,921 		JBrowse link
G Colq collagen like tail subunit of asymmetric acetylcholinesterase enables IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004936473:2,877,543...2,941,374
Ensembl chrNW_004936473:2,877,568...2,939,840 		JBrowse link
structural constituent of egg coat term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Zp1 zona pellucida glycoprotein 1 enables IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004936581:2,050,908...2,057,689
Ensembl chrNW_004936581:2,050,883...2,057,719 		JBrowse link
G Zp2 zona pellucida glycoprotein 2 enables IEA TreeGrafter
Ensembl		 GO_REF:0000107 GO_REF:0000118 NCBI chrNW_004936501:6,394,838...6,407,512
Ensembl chrNW_004936501:6,394,838...6,407,442 		JBrowse link
G Zp3 zona pellucida glycoprotein 3 enables IEA Ensembl
UniProt		 GO_REF:0000104 GO_REF:0000107 NCBI chrNW_004936543:2,013,231...2,022,270 JBrowse link
structural constituent of synapse-associated extracellular matrix term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Hapln4 hyaluronan and proteoglycan link protein 4 enables IEA Ensembl GO_REF:0000107 NCBI chrNW_004936596:2,175,414...2,181,825
Ensembl chrNW_004936596:2,175,361...2,182,799 		JBrowse link
G Lamb1 laminin subunit beta 1 enables IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004936479:16,177,200...16,245,268
Ensembl chrNW_004936479:16,177,158...16,247,165 		JBrowse link
G Lamb2 laminin subunit beta 2 enables IEA Ensembl GO_REF:0000107 NCBI chrNW_004936529:826,178...841,304
Ensembl chrNW_004936529:826,142...841,337 		JBrowse link
structural constituent of tooth enamel term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ambn ameloblastin enables IEA InterPro GO_REF:0000002 NCBI chrNW_004936598:4,154,801...4,166,565
Ensembl chrNW_004936598:4,155,061...4,167,497 		JBrowse link
G Amelx amelogenin X-linked enables ISO
IEA		 RGD
TreeGrafter
Ensembl		 PMID:16674699 GO_REF:0000107 GO_REF:0000118 RGD:1599097 NCBI chrNW_004936470:1,169,906...1,174,166
Ensembl chrNW_004936470:1,169,906...1,179,604 		JBrowse link
G Enam enamelin enables IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004936598:4,118,031...4,132,342
Ensembl chrNW_004936598:4,118,579...4,132,692 		JBrowse link
Term paths to the root