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ONTOLOGY REPORT - ANNOTATIONS

Term:extracellular matrix structural constituent
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Accession:GO:0005201 term browser browse the term
Definition:The action of a molecule that contributes to the structural integrity of the extracellular matrix.
Comment:Extracellular matrix glycoproteins may be annotated to this term. PMID:24443019
Synonyms:narrow_synonym: extracellular matrix glycoprotein
 broad_synonym: core extracellular matrix;   core matrisome


show annotations for term's descendants           Sort by:
extracellular matrix structural constituent term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Col11a1 collagen type XI alpha 1 chain TAS RGD PMID:12962540 RGD:1300046 NCBI chr 2:201,820,715...202,013,853
Ensembl chr 2:201,820,715...202,013,853 		JBrowse link
G Col12a1 collagen type XII alpha 1 chain TAS RGD PMID:10419532 RGD:727275 NCBI chr 8:80,547,592...80,665,665
Ensembl chr 8:80,547,593...80,665,686 		JBrowse link
G Col1a1 collagen type I alpha 1 chain enables ISO
IEA		 (PMID:15383546)
GO_REF:0000002		 RGD
InterPro		 PMID:15383546 GO_REF:0000002 NCBI chr10:79,883,622...79,900,625
Ensembl chr10:79,883,622...79,900,624 		JBrowse link
G Col1a2 collagen type I alpha 2 chain enables IEA GO_REF:0000002 InterPro GO_REF:0000002 NCBI chr 4:32,563,938...32,598,868
Ensembl chr 4:32,563,381...32,598,867 		JBrowse link
G Col27a1 collagen type XXVII alpha 1 chain enables ISO
IEA		 (PMID:22206015)
GO_REF:0000107		 RGD
Ensembl		 PMID:22206015 GO_REF:0000107 NCBI chr 5:76,647,302...76,765,989
Ensembl chr 5:76,647,429...76,765,174 		JBrowse link
G Col2a1 collagen type II alpha 1 chain enables IEA GO_REF:0000002 InterPro GO_REF:0000002 NCBI chr 7:129,098,489...129,127,560
Ensembl chr 7:129,098,786...129,127,546 		JBrowse link
G Col3a1 collagen type III alpha 1 chain enables ISO (PMID:7487954), (PMID:9036918) RGD PMID:7487954 PMID:9036918 NCBI chr 9:47,374,611...47,410,547
Ensembl chr 9:47,374,593...47,410,547 		JBrowse link
G Col4a1 collagen type IV alpha 1 chain enables ISO (PMID:20818663) RGD PMID:20818663 NCBI chr16:78,183,533...78,294,412
Ensembl chr16:78,183,533...78,294,412 		JBrowse link
G Col4a4 collagen type IV alpha 4 chain enables ISO (PMID:17942953), (PMID:19675380)
UniProtKB:P55268 (PMID:7962065)		 RGD PMID:7962065 PMID:17942953 PMID:19675380 NCBI chr 9:83,833,173...83,875,436
Ensembl chr 9:83,755,515...83,875,876 		JBrowse link
G Col4a6 collagen type IV alpha 6 chain enables ISO (PMID:10965041) RGD PMID:10965041 NCBI chr  X:104,766,463...105,117,499
Ensembl chr  X:104,766,957...105,117,500 		JBrowse link
G Col5a1 collagen type V alpha 1 chain enables ISO
IEA		 (PMID:15383546)
GO_REF:0000107
GO_REF:0000002		 RGD
Ensembl
InterPro		 PMID:15383546 GO_REF:0000002 GO_REF:0000107 NCBI chr 3:11,208,429...11,356,715
Ensembl chr 3:11,208,512...11,354,588 		JBrowse link
G Col5a2 collagen type V alpha 2 chain TAS RGD PMID:9822201 RGD:70694 NCBI chr 9:47,448,741...47,598,134
Ensembl chr 9:47,448,736...47,598,154 		JBrowse link
G Comp cartilage oligomeric matrix protein IDA RGD PMID:12225811 RGD:1298778 NCBI chr16:19,047,206...19,055,584
Ensembl chr16:19,047,207...19,055,845 		JBrowse link
G Eln elastin enables IEA GO_REF:0000002 InterPro GO_REF:0000002 NCBI chr12:21,968,544...22,011,929
Ensembl chr12:21,968,544...22,011,928 		JBrowse link
G Fbln1 fibulin 1 enables ISO (PMID:2269669) RGD PMID:2269669 NCBI chr 7:116,310,582...116,390,075
Ensembl chr 7:116,310,582...116,390,075 		JBrowse link
G Fbn1 fibrillin 1 enables ISO
IBA		 (PMID:3536967)
GO_REF:0000033		 RGD
GO_Central		 PMID:3536967 GO_REF:0000033 NCBI chr 3:112,554,257...112,750,835
Ensembl chr 3:112,554,925...112,750,889 		JBrowse link
G Fn1 fibronectin 1 TAS RGD PMID:17065553 RGD:1601194 NCBI chr 9:73,196,044...73,264,695
Ensembl chr 9:73,196,044...73,264,678 		JBrowse link
G Lama1 laminin subunit alpha 1 enables ISO
IBA		 (PMID:11984530)
GO_REF:0000033		 RGD
GO_Central		 PMID:11984530 GO_REF:0000033 NCBI chr 9:107,692,770...107,816,847
Ensembl chr 9:107,692,770...107,817,478 		JBrowse link
G Lama2 laminin subunit alpha 2 enables IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr 1:17,672,675...18,320,641
Ensembl chr 1:17,672,536...18,320,530 		JBrowse link
G Lama3 laminin subunit alpha 3 enables IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr18:3,523,168...3,751,722
Ensembl chr18:3,523,133...3,751,353 		JBrowse link
G Lama5 laminin subunit alpha 5 enables IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr 3:167,270,296...167,318,370
Ensembl chr 3:167,270,296...167,318,451 		JBrowse link
G Lamb1 laminin subunit beta 1 enables ISO (PMID:16289578) RGD PMID:16289578 NCBI chr 6:47,835,492...47,902,585
Ensembl chr 6:47,835,525...47,902,585 		JBrowse link
G Lamc1 laminin subunit gamma 1 enables ISO (PMID:15159456) RGD PMID:15159456 NCBI chr13:65,374,372...65,501,492
Ensembl chr13:65,374,372...65,501,492 		JBrowse link
G Muc2 mucin 2, oligomeric mucus/gel-forming enables ISO (PMID:35337837) RGD PMID:35337837 NCBI chr 1:196,799,494...196,831,740
Ensembl chr 1:196,799,517...196,831,756 		JBrowse link
G Pxdn peroxidasin enables ISO (PMID:19590037) RGD PMID:19590037 NCBI chr 6:46,580,749...46,658,345
Ensembl chr 6:46,580,761...46,658,345 		JBrowse link
G Tecta tectorin alpha enables IBA
ISO		 GO_REF:0000033
(PMID:9079715)		 GO_Central
RGD		 PMID:9079715 GO_REF:0000033 NCBI chr 8:42,707,962...42,779,726
Ensembl chr 8:42,707,962...42,779,707 		JBrowse link
G Tectb tectorin beta enables IBA
ISO		 GO_REF:0000033
(PMID:9079715)		 GO_Central
RGD		 PMID:9079715 GO_REF:0000033 NCBI chr 1:254,221,621...254,236,669
Ensembl chr 1:254,221,621...254,236,669 		JBrowse link
extracellular matrix constituent conferring elasticity term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Eln elastin enables IMP
ISO
IEA		 (PMID:20576933)
GO_REF:0000107		 RGD
Ensembl		 PMID:20576933 PMID:10090127 GO_REF:0000107, RGD:731206 NCBI chr12:21,968,544...22,011,929
Ensembl chr12:21,968,544...22,011,928 		JBrowse link
G Emilin1 elastin microfibril interfacer 1 enables IBA
ISO		 GO_REF:0000033
MGI:3028845 (PMID:14701737)		 GO_Central
RGD		 PMID:14701737 GO_REF:0000033 NCBI chr 6:25,455,974...25,463,713
Ensembl chr 6:25,445,298...25,463,698 		JBrowse link
extracellular matrix structural constituent conferring tensile strength term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Col10a1 collagen type X alpha 1 chain enables IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr20:38,183,103...38,189,488
Ensembl chr20:38,182,494...38,189,494 		JBrowse link
G Col11a1 collagen type XI alpha 1 chain enables IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr 2:201,820,715...202,013,853
Ensembl chr 2:201,820,715...202,013,853 		JBrowse link
G Col11a2 collagen type XI alpha 2 chain enables IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr20:4,786,932...4,816,598
Ensembl chr20:4,786,929...4,815,985 		JBrowse link
G Col12a1 collagen type XII alpha 1 chain enables IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr 8:80,547,592...80,665,665
Ensembl chr 8:80,547,593...80,665,686 		JBrowse link
G Col13a1 collagen type XIII alpha 1 chain enables IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr20:29,783,965...29,924,116
Ensembl chr20:29,783,965...29,924,032 		JBrowse link
G Col15a1 collagen type XV alpha 1 chain enables IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr 5:61,501,963...61,607,591
Ensembl chr 5:61,501,963...61,607,591 		JBrowse link
G Col17a1 collagen type XVII alpha 1 chain enables IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr 1:246,530,589...246,577,559
Ensembl chr 1:246,531,367...246,577,632 		JBrowse link
G Col18a1 collagen type XVIII alpha 1 chain enables IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr20:11,474,104...11,582,593
Ensembl chr20:11,474,104...11,582,593 		JBrowse link
G Col19a1 collagen type XIX alpha 1 chain enables IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr 9:26,673,916...27,022,139
Ensembl chr 9:26,675,391...27,022,106 		JBrowse link
G Col1a1 collagen type I alpha 1 chain enables IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr10:79,883,622...79,900,625
Ensembl chr10:79,883,622...79,900,624 		JBrowse link
G Col1a2 collagen type I alpha 2 chain enables IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr 4:32,563,938...32,598,868
Ensembl chr 4:32,563,381...32,598,867 		JBrowse link
G Col22a1 collagen type XXII alpha 1 chain enables IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr 7:103,730,939...103,968,452
Ensembl chr 7:103,731,037...103,968,462 		JBrowse link
G Col23a1 collagen type XXIII alpha 1 chain enables IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr10:35,549,090...35,839,152
Ensembl chr10:35,549,113...35,836,314 		JBrowse link
G Col24a1 collagen type XXIV alpha 1 chain enables IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr 2:234,212,256...234,469,445
Ensembl chr 2:234,212,324...234,469,441 		JBrowse link
G Col27a1 collagen type XXVII alpha 1 chain enables IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr 5:76,647,302...76,765,989
Ensembl chr 5:76,647,429...76,765,174 		JBrowse link
G Col28a1 collagen type XXVIII alpha 1 chain enables IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr 4:36,069,980...36,223,128
Ensembl chr 4:36,069,970...36,223,220 		JBrowse link
G Col2a1 collagen type II alpha 1 chain enables IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr 7:129,098,489...129,127,560
Ensembl chr 7:129,098,786...129,127,546 		JBrowse link
G Col3a1 collagen type III alpha 1 chain enables IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr 9:47,374,611...47,410,547
Ensembl chr 9:47,374,593...47,410,547 		JBrowse link
G Col4a1 collagen type IV alpha 1 chain enables ISO
IBA		 (PMID:16107487)
GO_REF:0000033		 RGD
GO_Central		 PMID:16107487 GO_REF:0000033 NCBI chr16:78,183,533...78,294,412
Ensembl chr16:78,183,533...78,294,412 		JBrowse link
G Col4a2 collagen type IV alpha 2 chain enables IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr16:78,047,591...78,183,360
Ensembl chr16:78,047,602...78,183,839 		JBrowse link
G Col4a3 collagen type IV alpha 3 chain enables IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr 9:83,875,849...84,004,955
Ensembl chr 9:83,875,561...84,001,895 		JBrowse link
G Col4a4 collagen type IV alpha 4 chain enables IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr 9:83,833,173...83,875,436
Ensembl chr 9:83,755,515...83,875,876 		JBrowse link
G Col4a5 collagen type IV alpha 5 chain enables IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr  X:105,118,762...105,322,699
Ensembl chr  X:105,118,820...105,322,692 		JBrowse link
G Col4a6 collagen type IV alpha 6 chain enables IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr  X:104,766,463...105,117,499
Ensembl chr  X:104,766,957...105,117,500 		JBrowse link
G Col5a1 collagen type V alpha 1 chain enables IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr 3:11,208,429...11,356,715
Ensembl chr 3:11,208,512...11,354,588 		JBrowse link
G Col5a2 collagen type V alpha 2 chain enables IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr 9:47,448,741...47,598,134
Ensembl chr 9:47,448,736...47,598,154 		JBrowse link
G Col5a3 collagen type V alpha 3 chain enables IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr 8:19,304,564...19,349,809
Ensembl chr 8:19,304,571...19,349,853 		JBrowse link
G Col6a1 collagen type VI alpha 1 chain enables IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr20:11,906,105...11,924,599
Ensembl chr20:11,905,957...11,924,597 		JBrowse link
G Col7a1 collagen type VII alpha 1 chain enables IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr 8:109,604,877...109,637,249
Ensembl chr 8:109,604,861...109,637,252 		JBrowse link
G Col8a1 collagen type VIII alpha 1 chain enables IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr11:42,776,851...42,906,432
Ensembl chr11:42,777,628...42,906,424 		JBrowse link
G Col8a2 collagen type VIII alpha 2 chain enables IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr 5:138,586,201...138,613,627
Ensembl chr 5:138,585,999...138,612,850 		JBrowse link
G Col9a2 collagen type IX alpha 2 chain enables IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr 5:134,607,616...134,624,678
Ensembl chr 5:134,607,616...134,624,677 		JBrowse link
G Col9a3 collagen type IX alpha 3 chain enables IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr 3:167,711,776...167,734,468
Ensembl chr 3:167,711,840...167,734,465 		JBrowse link
G Colq collagen like tail subunit of asymmetric acetylcholinesterase enables IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr16:6,731,850...6,824,973
Ensembl chr16:6,731,858...6,787,107 		JBrowse link
G Emid1 EMI domain containing 1 enables IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr14:80,000,486...80,043,561
Ensembl chr14:80,000,486...80,043,620 		JBrowse link
G Marco macrophage receptor with collagenous structure enables IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr13:31,616,278...31,648,521
Ensembl chr13:31,616,278...31,648,521 		JBrowse link
G Otol1 otolin 1 enables IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr 2:154,339,612...154,349,050
Ensembl chr 2:154,339,612...154,349,023 		JBrowse link
G Scara3 scavenger receptor class A, member 3 enables IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr15:40,139,873...40,172,866
Ensembl chr15:40,140,161...40,172,894 		JBrowse link
structural constituent of egg coat term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Zp1 zona pellucida glycoprotein 1 enables ISS
IBA		 GO_REF:0000024
GO_REF:0000033		 UniProt
GO_Central		 GO_REF:0000024 GO_REF:0000033 NCBI chr 1:207,560,881...207,567,261
Ensembl chr 1:207,560,881...207,567,261 		JBrowse link
G Zp2 zona pellucida glycoprotein 2 enables ISS
IBA
IEA
ISO		 GO_REF:0000024
GO_REF:0000033
GO_REF:0000107
(PMID:29895852)		 UniProt
GO_Central
Ensembl
RGD		 PMID:29895852 GO_REF:0000024 GO_REF:0000033 GO_REF:0000107 NCBI chr 1:174,513,507...174,525,288
Ensembl chr 1:174,513,511...174,525,288 		JBrowse link
G Zp3 zona pellucida glycoprotein 3 enables ISS
ISO
IEA		 GO_REF:0000024
(PMID:14645511)
GO_REF:0000104		 UniProt
RGD		 PMID:14645511 GO_REF:0000024 GO_REF:0000104 NCBI chr12:20,690,547...20,697,513
Ensembl chr12:20,690,547...20,697,513 		JBrowse link
G Zp4 zona pellucida glycoprotein 4 enables ISS
IBA		 GO_REF:0000024
GO_REF:0000033		 UniProt
GO_Central		 GO_REF:0000024 GO_REF:0000033 NCBI chr17:59,005,649...59,012,202
Ensembl chr17:59,005,649...59,012,202 		JBrowse link
structural constituent of synapse-associated extracellular matrix term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Hapln4 hyaluronan and proteoglycan link protein 4 enables ISO (PMID:22121037) RGD PMID:22121037 NCBI chr16:19,333,106...19,341,243
Ensembl chr16:19,333,106...19,341,243 		JBrowse link
G Lamb2 laminin subunit beta 2 enables IEA
ISO		 GO_REF:0000107
(PMID:17189701)		 Ensembl
RGD		 PMID:17189701 GO_REF:0000107 NCBI chr 8:109,178,367...109,190,552
Ensembl chr 8:109,178,409...109,190,549 		JBrowse link
structural constituent of tooth enamel term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ambn ameloblastin enables TAS
IEA		 GO_REF:0000002 InterPro
RGD		 PMID:8797107 GO_REF:0000002, RGD:632199 NCBI chr14:19,601,761...19,614,382
Ensembl chr14:19,601,702...19,614,393 		JBrowse link
G Amelx amelogenin, X-linked enables TAS
IDA
ISO
IBA		 (PMID:1483698), (PMID:1734713), (PMID:2509010)
GO_REF:0000033		 RGD
GO_Central		 PMID:1483698 PMID:1734713 PMID:2509010 PMID:8600184 PMID:16674699 GO_REF:0000033, RGD:632201, RGD:1599097 NCBI chr  X:25,076,362...25,087,660
Ensembl chr  X:25,076,362...25,087,660 		JBrowse link
G Enam enamelin enables IBA
ISO		 GO_REF:0000033
(PMID:24603688)		 GO_Central
RGD		 PMID:24603688 GO_REF:0000033 NCBI chr14:19,556,729...19,581,433
Ensembl chr14:19,556,729...19,581,425 		JBrowse link
Term paths to the root