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ONTOLOGY REPORT - ANNOTATIONS

Term:extracellular matrix structural constituent
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Accession:GO:0005201 term browser browse the term
Definition:The action of a molecule that contributes to the structural integrity of the extracellular matrix.
Comment:Extracellular matrix glycoproteins may be annotated to this term. PMID:24443019
Synonyms:narrow_synonym: extracellular matrix glycoprotein
 broad_synonym: core extracellular matrix;   core matrisome

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extracellular matrix structural constituent term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Angpt1 angiopoietin 1 enables IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004624763:22,645,807...22,818,592
Ensembl chrNW_004624763:22,646,231...22,718,294 		JBrowse link
G Angptl1 angiopoietin like 1 enables IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004624771:3,465,761...3,486,141
Ensembl chrNW_004624771:3,466,155...3,486,436 		JBrowse link
G Col11a1 collagen type XI alpha 1 chain enables IEA InterPro GO_REF:0000002 NCBI chrNW_004624857:5,817,472...6,176,421
Ensembl chrNW_004624857:5,817,475...6,029,107 		JBrowse link
G Col11a2 collagen type XI alpha 2 chain enables IEA InterPro GO_REF:0000002 NCBI chrNW_004624754:23,614,486...23,640,489
Ensembl chrNW_004624754:23,614,570...23,639,591 		JBrowse link
G Col1a1 collagen type I alpha 1 chain enables IEA InterPro GO_REF:0000002 NCBI chrNW_004624795:6,167,504...6,183,208
Ensembl chrNW_004624795:6,168,797...6,183,071 		JBrowse link
G Col1a2 collagen type I alpha 2 chain enables IEA InterPro GO_REF:0000002 NCBI chrNW_004624813:1,174,071...1,209,929
Ensembl chrNW_004624813:1,174,224...1,209,616 		JBrowse link
G Col24a1 collagen type XXIV alpha 1 chain enables IEA InterPro GO_REF:0000002 NCBI chrNW_004624742:11,434,735...11,747,582
Ensembl chrNW_004624742:11,435,738...11,746,290 		JBrowse link
G Col27a1 collagen type XXVII alpha 1 chain enables IEA InterPro GO_REF:0000002 NCBI chrNW_004624760:20,861,505...20,979,826 JBrowse link
G Col2a1 collagen type II alpha 1 chain enables IEA InterPro GO_REF:0000002 NCBI chrNW_004624816:4,273,969...4,304,519
Ensembl chrNW_004624816:4,274,219...4,304,513 		JBrowse link
G Col3a1 collagen type III alpha 1 chain enables IEA InterPro GO_REF:0000002 NCBI chrNW_004624899:1,192,078...1,230,528
Ensembl chrNW_004624899:1,192,360...1,230,404 		JBrowse link
G Col4a1 collagen type IV alpha 1 chain enables IEA InterPro GO_REF:0000002 NCBI chrNW_004624793:2,325,104...2,426,814
Ensembl chrNW_004624793:2,325,128...2,426,817 		JBrowse link
G Col4a2 collagen type IV alpha 2 chain enables IEA InterPro GO_REF:0000002 NCBI chrNW_004624793:2,201,815...2,325,002
Ensembl chrNW_004624793:2,202,244...2,324,507 		JBrowse link
G Col4a3 collagen type IV alpha 3 chain enables IEA InterPro GO_REF:0000002 NCBI chrNW_004624843:1,557,756...1,623,936 JBrowse link
G Col4a4 collagen type IV alpha 4 chain enables IEA InterPro GO_REF:0000002 NCBI chrNW_004624843:1,364,674...1,486,813
Ensembl chrNW_004624843:1,364,674...1,486,250 		JBrowse link
G Col4a5 collagen type IV alpha 5 chain enables IEA InterPro GO_REF:0000002 NCBI chrNW_004624803:7,509,877...7,916,365
Ensembl chrNW_004624803:7,511,041...7,916,031 		JBrowse link
G Col4a6 collagen type IV alpha 6 chain enables IEA InterPro GO_REF:0000002 NCBI chrNW_004624803:7,917,668...8,335,274 JBrowse link
G Col5a1 collagen type V alpha 1 chain enables IEA InterPro GO_REF:0000002 NCBI chrNW_004624760:2,593,923...2,713,772
Ensembl chrNW_004624760:2,593,961...2,713,772 		JBrowse link
G Col5a2 collagen type V alpha 2 chain enables IEA InterPro GO_REF:0000002 NCBI chrNW_004624899:1,035,797...1,175,394
Ensembl chrNW_004624899:1,035,964...1,174,844 		JBrowse link
G Col5a3 collagen type V alpha 3 chain enables IEA InterPro GO_REF:0000002 NCBI chrNW_004624828:2,216,179...2,254,868 JBrowse link
G Comp cartilage oligomeric matrix protein ISO RGD PMID:12225811 RGD:1298778 NCBI chrNW_004624908:1,870,975...1,877,434
Ensembl chrNW_004624908:1,871,002...1,877,369 		JBrowse link
G Eln elastin enables IEA InterPro GO_REF:0000002 NCBI chrNW_004624740:13,856,932...13,886,266 JBrowse link
G Fbln1 fibulin 1 enables ISO (PMID:2269669) UniProt PMID:2269669 NCBI chrNW_004624752:4,109,478...4,189,987
Ensembl chrNW_004624752:4,109,478...4,190,066 		JBrowse link
G Fbn1 fibrillin 1 enables ISO (PMID:3536967) UniProt PMID:3536967 NCBI chrNW_004624731:11,086,240...11,318,111
Ensembl chrNW_004624731:11,086,844...11,318,102 		JBrowse link
G Fga fibrinogen alpha chain enables IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004624858:5,848,817...5,856,448 JBrowse link
G Fgb fibrinogen beta chain enables IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004624858:5,866,104...5,874,173
Ensembl chrNW_004624858:5,864,784...5,874,869 		JBrowse link
G Fgg fibrinogen gamma chain enables IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004624858:5,828,334...5,836,382
Ensembl chrNW_004624858:5,827,316...5,838,170 		JBrowse link
G Fgl1 fibrinogen like 1 enables IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004624769:21,308,319...21,350,026
Ensembl chrNW_004624769:21,308,280...21,350,026 		JBrowse link
G Fn1 fibronectin 1 enables IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004624765:707,872...775,056
Ensembl chrNW_004624765:707,755...775,056 		JBrowse link
G Lama1 laminin subunit alpha 1 enables IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004624770:16,358,952...16,490,986
Ensembl chrNW_004624770:16,359,255...16,462,817 		JBrowse link
G Lama2 laminin subunit alpha 2 enables IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004624753:3,194,678...3,794,145
Ensembl chrNW_004624753:3,336,227...3,793,940 		JBrowse link
G Lama3 laminin subunit alpha 3 enables IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004624770:8,237,085...8,482,770 JBrowse link
G Lama5 laminin subunit alpha 5 enables IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004624741:28,156,956...28,217,133
Ensembl chrNW_004624741:28,157,172...28,217,113 		JBrowse link
G Lamb1 laminin subunit beta 1 enables IEA Ensembl GO_REF:0000107 NCBI chrNW_004624739:21,771,617...21,843,888
Ensembl chrNW_004624739:21,771,226...21,843,884 		JBrowse link
G Lamc1 laminin subunit gamma 1 enables ISO (PMID:15159456) HGNC-UCL PMID:15159456 NCBI chrNW_004624814:10,572,026...10,701,805
Ensembl chrNW_004624814:10,570,356...10,701,977 		JBrowse link
G Muc2 mucin 2, oligomeric mucus/gel-forming enables ISO (PMID:35337837) UniProt PMID:35337837 NCBI chrNW_004624766:21,493,125...21,522,535 JBrowse link
G Pxdn peroxidasin enables ISO (PMID:19590037) UniProt PMID:19590037 NCBI chrNW_004624846:6,259,807...6,329,849
Ensembl chrNW_004624846:6,259,765...6,331,100 		JBrowse link
G Tecta tectorin alpha enables IEA Ensembl
TreeGrafter		 GO_REF:0000107 GO_REF:0000118 NCBI chrNW_004624880:4,040,402...4,122,377
Ensembl chrNW_004624880:4,041,020...4,122,377 		JBrowse link
G Tectb tectorin beta enables IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004624737:34,144,175...34,158,417
Ensembl chrNW_004624737:34,146,587...34,157,957 		JBrowse link
extracellular matrix constituent conferring elasticity term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Eln elastin enables ISO (PMID:20576933) RGD
BHF-UCL		 PMID:10090127 PMID:20576933 RGD:731206 NCBI chrNW_004624740:13,856,932...13,886,266 JBrowse link
G Emilin1 elastin microfibril interfacer 1 enables IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004624738:9,180,944...9,189,025
Ensembl chrNW_004624738:9,180,877...9,189,025 		JBrowse link
extracellular matrix structural constituent conferring tensile strength term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Col11a1 collagen type XI alpha 1 chain enables IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004624857:5,817,472...6,176,421
Ensembl chrNW_004624857:5,817,475...6,029,107 		JBrowse link
G Col11a2 collagen type XI alpha 2 chain enables IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004624754:23,614,486...23,640,489
Ensembl chrNW_004624754:23,614,570...23,639,591 		JBrowse link
G Col15a1 collagen type XV alpha 1 chain enables IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004624825:1,939,685...2,041,575 JBrowse link
G Col17a1 collagen type XVII alpha 1 chain enables IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004624831:3,145,445...3,190,498
Ensembl chrNW_004624831:3,146,527...3,185,396 		JBrowse link
G Col1a1 collagen type I alpha 1 chain enables IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004624795:6,167,504...6,183,208
Ensembl chrNW_004624795:6,168,797...6,183,071 		JBrowse link
G Col24a1 collagen type XXIV alpha 1 chain enables IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004624742:11,434,735...11,747,582
Ensembl chrNW_004624742:11,435,738...11,746,290 		JBrowse link
G Col28a1 collagen type XXVIII alpha 1 chain enables IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004624813:4,945,733...5,180,098
Ensembl chrNW_004624813:4,947,301...5,152,632 		JBrowse link
G Col2a1 collagen type II alpha 1 chain enables IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004624816:4,273,969...4,304,519
Ensembl chrNW_004624816:4,274,219...4,304,513 		JBrowse link
G Col4a1 collagen type IV alpha 1 chain enables IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004624793:2,325,104...2,426,814
Ensembl chrNW_004624793:2,325,128...2,426,817 		JBrowse link
G Col4a2 collagen type IV alpha 2 chain enables IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004624793:2,201,815...2,325,002
Ensembl chrNW_004624793:2,202,244...2,324,507 		JBrowse link
G Col4a3 collagen type IV alpha 3 chain enables IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004624843:1,557,756...1,623,936 JBrowse link
G Col4a4 collagen type IV alpha 4 chain enables IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004624843:1,364,674...1,486,813
Ensembl chrNW_004624843:1,364,674...1,486,250 		JBrowse link
G Col4a5 collagen type IV alpha 5 chain enables IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004624803:7,509,877...7,916,365
Ensembl chrNW_004624803:7,511,041...7,916,031 		JBrowse link
G Col4a6 collagen type IV alpha 6 chain enables IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004624803:7,917,668...8,335,274 JBrowse link
G Col5a1 collagen type V alpha 1 chain enables IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004624760:2,593,923...2,713,772
Ensembl chrNW_004624760:2,593,961...2,713,772 		JBrowse link
G Col5a2 collagen type V alpha 2 chain enables IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004624899:1,035,797...1,175,394
Ensembl chrNW_004624899:1,035,964...1,174,844 		JBrowse link
G Col5a3 collagen type V alpha 3 chain enables IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004624828:2,216,179...2,254,868 JBrowse link
G Col6a1 collagen type VI alpha 1 chain enables IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004624745:31,125,136...31,140,126
Ensembl chrNW_004624745:31,125,265...31,139,318 		JBrowse link
G Col6a2 collagen type VI alpha 2 chain enables IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004624745:31,246,458...31,272,403
Ensembl chrNW_004624745:31,258,825...31,272,524 		JBrowse link
G Col7a1 collagen type VII alpha 1 chain enables IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004624730:2,569,510...2,599,959 JBrowse link
G Col9a1 collagen type IX alpha 1 chain enables IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004624819:9,571,250...9,664,541
Ensembl chrNW_004624819:9,571,265...9,663,820 		JBrowse link
G Col9a2 collagen type IX alpha 2 chain enables IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004624764:22,782,027...22,796,401
Ensembl chrNW_004624764:22,782,027...22,795,767 		JBrowse link
G Col9a3 collagen type IX alpha 3 chain enables IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004624741:28,591,529...28,610,382 JBrowse link
G Colq collagen like tail subunit of asymmetric acetylcholinesterase enables IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004624822:5,162,989...5,222,140
Ensembl chrNW_004624822:5,163,506...5,222,134 		JBrowse link
G Marco macrophage receptor with collagenous structure enables IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004624732:26,203,345...26,236,001
Ensembl chrNW_004624732:26,203,219...26,236,057 		JBrowse link
G Msr1 macrophage scavenger receptor 1 enables IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004624839:694,149...769,322
Ensembl chrNW_004624839:694,032...770,254 		JBrowse link
structural constituent of egg coat term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G LOC101710965 zona pellucida sperm-binding protein 2-like enables IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004624775:8,890,309...8,891,578 JBrowse link
G Zp2 zona pellucida glycoprotein 2 enables IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004624782:7,275,156...7,287,480
Ensembl chrNW_004624782:7,275,207...7,287,114 		JBrowse link
G Zp3 zona pellucida glycoprotein 3 enables IEA UniProt GO_REF:0000104 NCBI chrNW_004624740:15,037,818...15,044,207
Ensembl chrNW_004624740:15,037,943...15,044,193 		JBrowse link
G Zp4 zona pellucida glycoprotein 4 enables IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004624775:12,903,145...12,910,048
Ensembl chrNW_004624775:12,902,697...12,910,149 		JBrowse link
structural constituent of synapse-associated extracellular matrix term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Hapln4 hyaluronan and proteoglycan link protein 4 enables ISO (PMID:22121037) UniProt PMID:22121037 NCBI chrNW_004624908:2,128,764...2,136,385
Ensembl chrNW_004624908:2,131,033...2,134,835 		JBrowse link
G Lamb1 laminin subunit beta 1 enables IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004624739:21,771,617...21,843,888
Ensembl chrNW_004624739:21,771,226...21,843,884 		JBrowse link
G Lamb2 laminin subunit beta 2 enables ISO (PMID:17189701) SynGO PMID:17189701 NCBI chrNW_004624730:3,145,643...3,158,781
Ensembl chrNW_004624730:3,145,643...3,159,101 		JBrowse link
structural constituent of tooth enamel term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ambn ameloblastin enables IEA InterPro GO_REF:0000002 NCBI chrNW_004624890:1,943,471...1,954,948
Ensembl chrNW_004624890:1,942,559...1,954,490 		JBrowse link
G Amelx amelogenin X-linked enables ISO
IEA		 RGD
TreeGrafter		 PMID:16674699 GO_REF:0000118 RGD:1599097 NCBI chrNW_004624882:3,072,970...3,083,832
Ensembl chrNW_004624882:3,072,313...3,082,505 		JBrowse link
G Enam enamelin enables IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004624890:1,970,153...1,982,428
Ensembl chrNW_004624890:1,970,153...1,982,428 		JBrowse link
Term paths to the root