ONTOLOGY REPORT - ANNOTATIONS
Term: single-stranded DNA binding
Accession: GO:0003697
browse the term
Definition: Binding to single-stranded DNA.
Comment: Note that this term is restricted to those cases where the binding is to a single-stranded DNA molecule, not to one of the stands of double-stranded DNA.
Synonyms: exact_synonym: ssDNA binding
alt_id: GO:0003698; GO:0003699
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Alyref
Aly/REF export factor
enables
ISO
(PMID:10786854)
MGI
PMID:10786854
NCBI chrNW_004624801:10,734,392...10,738,191
Ensembl chrNW_004624801:10,733,907...10,738,124
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Anxa1
annexin A1
contributes_to
ISO
RGD
PMID:10548514 PMID:20655937
RGD:2306916 RGD:7421590
NCBI chrNW_004624811:765,338...782,203
Ensembl chrNW_004624811:764,940...782,198
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Aptx
aprataxin
enables
IEA
TreeGrafter
GO_REF:0000118
NCBI chrNW_004624736:37,729,624...37,757,780
Ensembl chrNW_004624736:37,730,072...37,749,174
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Blm
BLM RecQ like helicase
enables
ISO
(PMID:12818200), (PMID:20639533)
UniProt
PMID:12818200 PMID:20639533
NCBI chrNW_004624768:17,422,267...17,522,894
Ensembl chrNW_004624768:17,421,291...17,522,799
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Brca2
BRCA2 DNA repair associated
enables
ISO
(PMID:20729832)
UniProt RGD
PMID:12228710 PMID:20729832
RGD:632363
NCBI chrNW_004624776:5,497,552...5,573,465
Ensembl chrNW_004624776:5,497,779...5,550,993
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Cdc45
cell division cycle 45
enables
IEA
TreeGrafter
GO_REF:0000118
NCBI chrNW_004624747:132,731...161,590
Ensembl chrNW_004624747:132,835...161,553
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Cnbp
CCHC-type zinc finger nucleic acid binding protein
ISO
RGD
PMID:7788528
RGD:632384
NCBI chrNW_004624943:943,381...955,997
Ensembl chrNW_004624943:944,900...959,999
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Cry2
cryptochrome circadian regulator 2
enables
ISO
(PMID:12627958)
UniProt
PMID:12627958
NCBI chrNW_004624767:2,622,786...2,652,663
Ensembl chrNW_004624767:2,621,311...2,653,071
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Ctc1
CST telomere replication complex component 1
enables
IEA
InterPro TreeGrafter
GO_REF:0000002 GO_REF:0000118
NCBI chrNW_004624786:10,795,848...10,819,029
Ensembl chrNW_004624786:10,795,193...10,819,613
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CUNH19orf33
chromosome unknown C19orf33 homolog
NOT|enables
ISO
(PMID:11080599)
HGNC-UCL
PMID:11080599
NCBI chrNW_004624794:11,773,557...11,774,502
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Ddx11
DEAD/H-box helicase 11
enables
ISO
(PMID:9013641)
UniProt
PMID:9013641
NCBI chrNW_004624828:269,444...301,899
Ensembl chrNW_004624828:269,843...302,301
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Dhx36
DEAH-box helicase 36
enables
ISO
(PMID:20696886)
UniProt
PMID:20696886
NCBI chrNW_004624730:31,857,157...31,913,985
Ensembl chrNW_004624730:31,855,992...31,914,253
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Dhx9
DExH-box helicase 9
enables
ISO
(PMID:10198287), (PMID:20696886), (PMID:21957149), (PMID:9111062)
UniProt
PMID:9111062 PMID:10198287 PMID:20696886 PMID:21957149
NCBI chrNW_004624814:10,863,079...10,923,842
Ensembl chrNW_004624814:10,863,337...10,921,075
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Dmc1
DNA meiotic recombinase 1
enables
IEA
TreeGrafter
GO_REF:0000118
NCBI chrNW_004624752:9,547,327...9,585,549
Ensembl chrNW_004624752:9,548,015...9,585,958
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Ercc1
ERCC excision repair 1, endonuclease non-catalytic subunit
enables
IEA
TreeGrafter
GO_REF:0000118
NCBI chrNW_004624907:2,288,380...2,298,909
Ensembl chrNW_004624907:2,288,423...2,298,373
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Ercc4
ERCC excision repair 4, endonuclease catalytic subunit
enables
IEA
InterPro TreeGrafter
GO_REF:0000002 GO_REF:0000118
NCBI chrNW_004624782:4,508,758...4,537,751
Ensembl chrNW_004624782:4,512,650...4,537,701
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Ercc5
ERCC excision repair 5, endonuclease
enables
IEA
InterPro TreeGrafter
GO_REF:0000002 GO_REF:0000118
NCBI chrNW_004624793:8,632,581...8,657,514
Ensembl chrNW_004624793:8,632,471...8,657,346
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Fam111a
FAM111 trypsin like peptidase A
enables
ISO
(PMID:32165630)
UniProt
PMID:32165630
NCBI chrNW_004624864:1,518,454...1,532,126
Ensembl chrNW_004624864:1,521,966...1,525,962
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Fbh1
F-box DNA helicase 1
enables
ISO
(PMID:19736316), (PMID:23393192)
UniProt
PMID:19736316 PMID:23393192
NCBI chrNW_004624775:788,388...844,968
Ensembl chrNW_004624775:788,463...837,524
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Fubp3
far upstream element binding protein 3
enables
ISO
(PMID:8940189)
MGI
PMID:8940189
NCBI chrNW_004624760:5,078,698...5,122,905
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Hmces
5-hydroxymethylcytosine binding, ES cell specific
enables
IEA
InterPro
GO_REF:0000002
NCBI chrNW_004624872:344,249...353,577
Ensembl chrNW_004624872:344,262...352,936
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Hmgb1
high mobility group box 1
ISO
RGD
PMID:11024186
RGD:2316830
NCBI chrNW_004624776:7,858,400...7,862,716
Ensembl chrNW_004624776:7,793,259...7,863,184
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Hmgb2
high mobility group box 2
enables
ISO
(PMID:11754747)
AgBase
PMID:11754747
NCBI chrNW_004624769:4,834,998...4,837,111
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Hnrnpa1
heterogeneous nuclear ribonucleoprotein A1
enables
ISO
(PMID:8521471)
HGNC-UCL
PMID:8521471
NCBI chrNW_004624904:2,314,197...2,320,900
Ensembl chrNW_004624904:2,314,249...2,318,791
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Hnrnpdl
heterogeneous nuclear ribonucleoprotein D like
enables
ISO
(PMID:9538234)
UniProt
PMID:9538234
NCBI chrNW_004624757:8,488,619...8,495,498
Ensembl chrNW_004624757:8,488,365...8,495,822
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Hnrnpk
heterogeneous nuclear ribonucleoprotein K
ISO
RGD
PMID:15361071
RGD:10002777
NCBI chrNW_004624809:7,538,568...7,548,272
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Hnrnpu
heterogeneous nuclear ribonucleoprotein U
enables
ISO
(PMID:1628625), (PMID:8068679), (PMID:8174554)
UniProt
PMID:1628625 PMID:8068679 PMID:8174554
NCBI chrNW_004624771:14,756,088...14,766,106
Ensembl chrNW_004624771:14,756,100...14,765,832
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Hrob
homologous recombination factor with OB-fold
enables
ISO
(PMID:31467087)
UniProt
PMID:31467087
NCBI chrNW_004624795:799,533...806,876
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Ighmbp2
immunoglobulin mu DNA binding protein 2
enables
ISO
(PMID:30218034)
UniProt
PMID:30218034
NCBI chrNW_004624767:18,038,559...18,065,745
Ensembl chrNW_004624767:18,036,650...18,065,742
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Jchain
joining chain of multimeric IgA and IgM
contributes_to
ISO
(PMID:21786026)
UniProtKB
PMID:21786026
NCBI chrNW_004624890:1,992,239...2,022,352
Ensembl chrNW_004624890:1,990,696...2,014,041
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LOC101704237
histone-lysine N-methyltransferase SETMAR
enables
ISO
(PMID:24573677)
UniProt
PMID:24573677
NCBI chrNW_004624773:14,680,571...14,692,583
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LOC101714760
sprT-like domain-containing protein Spartan
enables
IEA
InterPro
GO_REF:0000002
NCBI chrNW_004624730:45,548,452...45,552,501
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Lonp1
lon peptidase 1, mitochondrial
enables
IEA
TreeGrafter
GO_REF:0000118
NCBI chrNW_004624828:4,494,786...4,516,772
Ensembl chrNW_004624828:4,494,813...4,516,510
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Lrpprc
leucine rich pentatricopeptide repeat containing
enables
IEA
Ensembl
GO_REF:0000107
NCBI chrNW_004624738:25,340,588...25,452,593
Ensembl chrNW_004624738:25,338,098...25,452,676
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Mcm10
minichromosome maintenance 10 replication initiation factor
enables
IEA
InterPro TreeGrafter
GO_REF:0000002 GO_REF:0000118
NCBI chrNW_004624805:5,728,781...5,766,796
Ensembl chrNW_004624805:5,728,569...5,765,862
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Mcm3
minichromosome maintenance complex component 3
enables
IEA
TreeGrafter
GO_REF:0000118
NCBI chrNW_004624855:3,806,273...3,825,143
Ensembl chrNW_004624855:3,806,553...3,827,873
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Mcm4
minichromosome maintenance complex component 4
contributes_to enables
ISO IEA
(PMID:25661590) (PMID:10567526), (PMID:12207017)
UniProt Ensembl TreeGrafter
PMID:10567526 PMID:12207017 PMID:25661590
GO_REF:0000107 GO_REF:0000118
NCBI chrNW_004624735:7,516,510...7,533,789
Ensembl chrNW_004624735:7,516,516...7,533,760
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Mcm5
minichromosome maintenance complex component 5
enables
IEA
TreeGrafter
GO_REF:0000118
NCBI chrNW_004624750:327,444...340,790
Ensembl chrNW_004624750:327,304...341,325
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Mcm6
minichromosome maintenance complex component 6
contributes_to enables
ISO IEA
(PMID:25661590) (PMID:12207017) (PMID:10567526)
UniProt Ensembl TreeGrafter
PMID:10567526 PMID:12207017 PMID:25661590
GO_REF:0000107 GO_REF:0000118
NCBI chrNW_004624732:35,179,488...35,217,437
Ensembl chrNW_004624732:35,179,488...35,217,391
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Mcm7
minichromosome maintenance complex component 7
contributes_to enables
ISO IEA
(PMID:25661590) (PMID:12207017)
UniProt TreeGrafter
PMID:12207017 PMID:25661590
GO_REF:0000118
NCBI chrNW_004624740:16,887,699...16,895,224
Ensembl chrNW_004624740:16,887,775...16,899,934
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Mcm8
minichromosome maintenance 8 homologous recombination repair factor
enables
IEA
TreeGrafter
GO_REF:0000118
NCBI chrNW_004624741:6,787,555...6,826,033
Ensembl chrNW_004624741:6,787,578...6,827,188
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Mcm9
minichromosome maintenance 9 homologous recombination repair factor
enables
IEA
TreeGrafter
GO_REF:0000118
NCBI chrNW_004624798:11,287,882...11,370,040
Ensembl chrNW_004624798:11,290,074...11,367,495
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Meiob
meiosis specific with OB-fold
enables
IEA
TreeGrafter
GO_REF:0000118
NCBI chrNW_004624913:389,772...426,196
Ensembl chrNW_004624913:394,154...426,196
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Mlh1
mutL homolog 1
contributes_to
ISO
(PMID:11809883)
HGNC
PMID:11809883
NCBI chrNW_004624788:15,110,436...15,160,462
Ensembl chrNW_004624788:15,110,658...15,160,535
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Mms22l
MMS22 like, DNA repair protein
enables
ISO
(PMID:27797818)
UniProt
PMID:27797818
NCBI chrNW_004624810:8,035,864...8,168,555
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Msh2
mutS homolog 2
contributes_to enables
ISO IEA
(PMID:11809883)
HGNC Ensembl
PMID:11809883
GO_REF:0000107
NCBI chrNW_004624738:28,780,596...28,861,523
Ensembl chrNW_004624738:28,780,614...28,861,704
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Msh3
mutS homolog 3
contributes_to
ISO
(PMID:11809883)
HGNC
PMID:11809883
NCBI chrNW_004624743:1,461,952...1,581,524
Ensembl chrNW_004624743:1,461,077...1,581,180
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Nabp1
nucleic acid binding protein 1
enables
ISO
(PMID:16533169)
MGI
PMID:16533169
NCBI chrNW_004624854:4,512,692...4,520,684
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Nabp2
nucleic acid binding protein 2
enables
ISO
(PMID:18449195), (PMID:19683501)
UniProt
PMID:18449195 PMID:19683501
NCBI chrNW_004624802:11,774,237...11,780,822
Ensembl chrNW_004624802:11,774,237...11,780,250
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Ncl
nucleolin
ISO
RGD
PMID:6311246
RGD:9693696
NCBI chrNW_004624843:4,620,501...4,630,521
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Neil3
nei like DNA glycosylase 3
enables
IEA
Ensembl
GO_REF:0000107
NCBI chrNW_004624769:8,436,526...8,480,336
Ensembl chrNW_004624769:8,448,226...8,480,439
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Nol12
nucleolar protein 12
ISO
RGD
PMID:16430885
RGD:8553573
NCBI chrNW_004624752:10,191,778...10,197,856
Ensembl chrNW_004624752:10,190,769...10,197,808
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Nucks1
nuclear casein kinase and cyclin dependent kinase substrate 1
enables
IEA
TreeGrafter
GO_REF:0000118
NCBI chrNW_004624807:5,495,770...5,535,907
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Park7
Parkinsonism associated deglycase
NOT|enables
ISO
(PMID:22683601)
ParkinsonsUK-UCL
PMID:22683601
NCBI chrNW_004624818:3,900,917...3,915,457
Ensembl chrNW_004624818:3,900,917...3,911,042
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Pcbp1
poly(rC) binding protein 1
enables
ISO
(PMID:8152927) (PMID:15836633)
UniProt MGI
PMID:8152927 PMID:15836633
NCBI chrNW_004624762:3,330,978...3,332,582
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Pcbp2
poly(rC) binding protein 2
enables
ISO
(PMID:24026233)
MGI
PMID:24026233
NCBI chrNW_004624904:1,553,253...1,579,212
Ensembl chrNW_004624904:1,555,635...1,578,982
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Pms2
PMS1 homolog 2, mismatch repair system component
contributes_to
ISO
(PMID:11809883)
HGNC
PMID:11809883
NCBI chrNW_004624740:31,315,121...31,345,137
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Pola1
DNA polymerase alpha 1, catalytic subunit
enables
IEA
TreeGrafter
GO_REF:0000118
NCBI chrNW_004624897:969,431...1,272,762
Ensembl chrNW_004624897:969,479...1,272,803
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Polr2g
RNA polymerase II subunit G
enables
IEA
TreeGrafter
GO_REF:0000118
NCBI chrNW_004624926:1,228,590...1,230,943
Ensembl chrNW_004624926:1,228,602...1,230,943
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Polr2h
RNA polymerase II, I and III subunit H
enables
IEA
Ensembl
GO_REF:0000107
NCBI chrNW_004624730:72,221,964...72,228,133
Ensembl chrNW_004624730:72,221,964...72,228,616
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Polr3c
RNA polymerase III subunit C
enables
IEA
Ensembl InterPro UniProt
GO_REF:0000002 GO_REF:0000104 GO_REF:0000107
NCBI chrNW_004624772:17,196,418...17,212,265
Ensembl chrNW_004624772:17,196,388...17,212,727
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Pou4f1
POU class 4 homeobox 1
enables
ISO
(PMID:8621561)
UniProt
PMID:8621561
NCBI chrNW_004624751:21,812,567...21,817,837
Ensembl chrNW_004624751:21,812,850...21,814,747
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Ptbp1
polypyrimidine tract binding protein 1
ISO
RGD
PMID:1561080
RGD:10045981
NCBI chrNW_004624828:7,750,419...7,762,645
Ensembl chrNW_004624828:7,750,323...7,762,589
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Pura
purine rich element binding protein A
enables
ISO
(PMID:10318844), (PMID:12933792)
UniProt
PMID:10318844 PMID:12933792
NCBI chrNW_004624743:32,878,677...32,888,650
Ensembl chrNW_004624743:32,884,552...32,885,517
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Purb
purine rich element binding protein B
enables
ISO
(PMID:10318844), (PMID:12933792)
UniProt
PMID:10318844 PMID:12933792
NCBI chrNW_004624740:7,398,481...7,406,923
Ensembl chrNW_004624740:7,398,481...7,399,434
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Rad18
RAD18 E3 ubiquitin protein ligase
enables
IEA
InterPro
GO_REF:0000002
NCBI chrNW_004624731:3,510,430...3,698,859
Ensembl chrNW_004624731:3,597,779...3,697,138
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Rad51
RAD51 recombinase
enables
IEA
InterPro TreeGrafter
GO_REF:0000002 GO_REF:0000118
NCBI chrNW_004624804:7,957,175...7,983,078
Ensembl chrNW_004624804:7,957,253...7,983,619
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Rad51ap1
RAD51 associated protein 1
enables
IEA
TreeGrafter
GO_REF:0000118
NCBI chrNW_004624860:1,627,606...1,643,569
Ensembl chrNW_004624860:1,627,765...1,643,667
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Rad51b
RAD51 paralog B
enables
IEA
TreeGrafter
GO_REF:0000118
NCBI chrNW_004624734:32,560,579...33,173,357
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Rad51d
RAD51 paralog D
enables
IEA
TreeGrafter
GO_REF:0000118
NCBI chrNW_004624875:2,972,739...2,987,360
Ensembl chrNW_004624875:2,972,678...2,987,344
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Rad52
RAD52 homolog, DNA repair protein
enables
ISO
(PMID:12370410)
CAFA
PMID:12370410
NCBI chrNW_004624735:9,123,599...9,153,373
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Rexo4
REX4 homolog, 3'-5' exonuclease
enables
IEA
Ensembl
GO_REF:0000107
NCBI chrNW_004624760:1,851,008...1,861,370
Ensembl chrNW_004624760:1,851,877...1,859,387
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Rnf138
ring finger protein 138
enables
IEA
TreeGrafter
GO_REF:0000118
NCBI chrNW_004624770:858,081...895,361
Ensembl chrNW_004624770:860,391...895,039
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Rpa1
replication protein A1
enables
ISO
(PMID:19010961), (PMID:8990123)
UniProt RGD
PMID:8463251 PMID:8990123 PMID:19010961
RGD:2307012
NCBI chrNW_004624786:4,547,889...4,604,605
Ensembl chrNW_004624786:4,547,962...4,604,290
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Rpa2
replication protein A2
enables
ISO
(PMID:19010961)
RGD UniProt
PMID:8463251 PMID:19010961
RGD:2307012
NCBI chrNW_004624764:11,737,234...11,763,862
Ensembl chrNW_004624764:11,736,129...11,764,080
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Rpa3
replication protein A3
enables
IEA
TreeGrafter
GO_REF:0000118
NCBI chrNW_004624813:5,248,794...5,252,264
Ensembl chrNW_004624813:5,247,033...5,253,413
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Rtf1
RTF1 homolog, Paf1/RNA polymerase II complex component
enables
ISO
(PMID:18184592)
UniProt
PMID:18184592
NCBI chrNW_004624804:8,588,751...8,649,180
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Samhd1
SAM and HD domain containing deoxynucleoside triphosphate triphosphohydrolase 1
enables
ISO
(PMID:29670289)
UniProt
PMID:29670289
NCBI chrNW_004624842:2,591,016...2,649,746
Ensembl chrNW_004624842:2,591,148...2,647,742
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Shoc1
shortage in chiasmata 1
enables
IEA
TreeGrafter
GO_REF:0000118
NCBI chrNW_004624760:23,220,294...23,332,094
Ensembl chrNW_004624760:23,249,730...23,332,198
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Smc2
structural maintenance of chromosomes 2
enables
ISO
(PMID:20139420)
MGI
PMID:20139420
NCBI chrNW_004624758:7,267,024...7,318,930
Ensembl chrNW_004624758:7,268,474...7,317,919
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Smc4
structural maintenance of chromosomes 4
enables
ISO
(PMID:20139420)
MGI
PMID:20139420
NCBI chrNW_004624730:38,145,101...38,178,788
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Smc5
structural maintenance of chromosomes 5
enables
IEA
TreeGrafter
GO_REF:0000118
NCBI chrNW_004624736:2,697,764...2,803,501
Ensembl chrNW_004624736:2,700,161...2,803,439
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Smc6
structural maintenance of chromosomes 6
enables
IEA
TreeGrafter
GO_REF:0000118
NCBI chrNW_004624738:612,758...689,191
Ensembl chrNW_004624738:614,402...681,430
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Spen
spen family transcriptional repressor
enables
ISO
(PMID:10451362)
MGI
PMID:10451362
NCBI chrNW_004624764:2,058,689...2,144,640
Ensembl chrNW_004624764:2,058,773...2,143,640
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Sprtn
SprT-like N-terminal domain
enables
IEA
InterPro
GO_REF:0000002
NCBI chrNW_004624775:18,382,718...18,397,411
Ensembl chrNW_004624775:18,384,276...18,397,399
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Ssbp1
single stranded DNA binding protein 1
enables
IEA
InterPro TreeGrafter
GO_REF:0000002 GO_REF:0000118
NCBI chrNW_004624765:21,746,633...21,771,234
Ensembl chrNW_004624765:21,746,794...21,761,258
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Ssbp2
single stranded DNA binding protein 2
enables
IEA
InterPro
GO_REF:0000002
NCBI chrNW_004624743:1,911,567...2,186,107
Ensembl chrNW_004624743:1,909,980...2,186,132
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Ssbp3
single stranded DNA binding protein 3
enables
IEA
InterPro
GO_REF:0000002
NCBI chrNW_004624934:161,323...313,621
Ensembl chrNW_004624934:161,054...311,937
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Ssbp4
single stranded DNA binding protein 4
enables
IEA
InterPro
GO_REF:0000002
NCBI chrNW_004624908:1,648,150...1,658,374
Ensembl chrNW_004624908:1,649,878...1,658,374
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Stn1
STN1 subunit of CST complex
enables
IEA
Ensembl
GO_REF:0000107
NCBI chrNW_004624831:2,999,061...3,030,447
Ensembl chrNW_004624831:2,999,800...3,030,443
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Sub1
SUB1 regulator of transcription
enables
ISO
(PMID:16605275) (PMID:8062391)
CAFA UniProt
PMID:8062391 PMID:16605275
NCBI chrNW_004624759:22,010,097...22,027,807
Ensembl chrNW_004624759:22,009,266...22,037,394
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Swsap1
SWIM-type zinc finger 7 associated protein 1
enables
IEA
TreeGrafter
GO_REF:0000118
NCBI chrNW_004624828:3,178,994...3,180,843
Ensembl chrNW_004624828:3,178,937...3,180,999
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Tdp1
tyrosyl-DNA phosphodiesterase 1
enables
IEA
TreeGrafter
GO_REF:0000118
NCBI chrNW_004624734:12,319,499...12,414,815
Ensembl chrNW_004624734:12,331,710...12,414,784
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Tdp2
tyrosyl-DNA phosphodiesterase 2
enables
IEA
TreeGrafter
GO_REF:0000118
NCBI chrNW_004624756:2,363,400...2,374,839
Ensembl chrNW_004624756:2,363,718...2,375,152
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Ten1
TEN1 subunit of CST complex
enables
IEA
InterPro
GO_REF:0000002
NCBI chrNW_004624801:5,867,474...5,900,298
Ensembl chrNW_004624801:5,880,221...5,900,121
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Top1
DNA topoisomerase I
enables
ISO
(PMID:8631794)
CAFA
PMID:8631794
NCBI chrNW_004624919:1,668,712...1,756,624
Ensembl chrNW_004624919:1,668,440...1,756,629
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Top3a
DNA topoisomerase III alpha
enables
ISO
(PMID:29290614)
UniProt
PMID:29290614
NCBI chrNW_004624849:3,159,432...3,196,235
Ensembl chrNW_004624849:3,159,810...3,194,860
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Trex1
three prime repair exonuclease 1
enables
IEA
Ensembl
GO_REF:0000107
NCBI chrNW_004624730:2,431,270...2,433,010
Ensembl chrNW_004624730:2,431,999...2,432,959
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Tsn
translin
contributes_to enables
ISO IEA
RGD InterPro
PMID:9681436
GO_REF:0000002 RGD:634412
NCBI chrNW_004624732:23,436,957...23,447,402
Ensembl chrNW_004624732:23,436,949...23,447,453
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Tsnax
translin associated factor X
contributes_to
ISO
RGD
PMID:9681436
RGD:634412
NCBI chrNW_004624775:18,224,737...18,264,462
Ensembl chrNW_004624775:18,227,072...18,263,894
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Twnk
twinkle mtDNA helicase
enables
IEA
InterPro TreeGrafter
GO_REF:0000002 GO_REF:0000118
NCBI chrNW_004624831:592,475...597,388
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Wdr48
WD repeat domain 48
enables
ISO
(PMID:27239033)
UniProt
PMID:27239033
NCBI chrNW_004624731:1,884,660...1,934,818
Ensembl chrNW_004624731:1,884,666...1,934,754
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Xpc
XPC complex subunit, DNA damage recognition and repair factor
enables
IEA
TreeGrafter
GO_REF:0000118
NCBI chrNW_004624872:1,438,673...1,467,206
Ensembl chrNW_004624872:1,438,769...1,466,642
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Ybx1
Y-box binding protein 1
enables
ISO
(PMID:15282343)
RGD MGI
PMID:15282343 PMID:17893273
RGD:2311253
NCBI chrNW_004624892:1,939,641...1,957,621
Ensembl chrNW_004624892:1,939,098...1,957,623
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Rad54l
RAD54 like
enables
ISO
(PMID:22705370)
UniProt
PMID:22705370
NCBI chrNW_004624906:2,164,711...2,194,262
Ensembl chrNW_004624906:2,165,780...2,193,764
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Smarca1
SNF2 related chromatin remodeling ATPase 1
enables
ISO
(PMID:22705370)
UniProt
PMID:22705370
NCBI chrNW_004624797:8,627,048...8,710,540
Ensembl chrNW_004624797:8,626,742...8,710,845
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Smarcal1
SNF2 related chromatin remodeling annealing helicase 1
enables
ISO
(PMID:18974355) (PMID:22705370)
UniProt
PMID:18974355 PMID:22705370
NCBI chrNW_004624823:8,645,340...8,708,039
Ensembl chrNW_004624823:8,644,826...8,706,591
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Tp53
tumor protein p53
enables
ISO
(PMID:8183576)
UniProt
PMID:8183576
NCBI chrNW_004624786:10,266,316...10,282,664
Ensembl chrNW_004624786:10,263,518...10,271,218
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Zranb3
zinc finger RANBP2-type containing 3
enables
ISO
(PMID:21078962), (PMID:22704558), (PMID:22705370)
UniProt
PMID:21078962 PMID:22704558 PMID:22705370
NCBI chrNW_004624732:34,561,249...34,848,093
Ensembl chrNW_004624732:34,556,784...34,848,965
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Hnrnpk
heterogeneous nuclear ribonucleoprotein K
ISO
RGD
PMID:8127654
RGD:728600
NCBI chrNW_004624809:7,538,568...7,548,272
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Pcbp2
poly(rC) binding protein 2
enables
ISO
(PMID:8208614)
MGI
PMID:8208614
NCBI chrNW_004624904:1,553,253...1,579,212
Ensembl chrNW_004624904:1,555,635...1,578,982
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Pcbp3
poly(rC) binding protein 3
enables
ISO
(PMID:22521865)
MGI
PMID:22521865
NCBI chrNW_004624745:30,866,883...31,104,845
Ensembl chrNW_004624745:31,037,384...31,104,250
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Nabp2
nucleic acid binding protein 2
NOT|enables
ISO
(PMID:25589350)
BHF-UCL
PMID:25589350
NCBI chrNW_004624802:11,774,237...11,780,822
Ensembl chrNW_004624802:11,774,237...11,780,250
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Anxa1
annexin A1
ISO
RGD
PMID:20655937
RGD:7421590
NCBI chrNW_004624811:765,338...782,203
Ensembl chrNW_004624811:764,940...782,198
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Blm
BLM RecQ like helicase
enables
ISO
(PMID:17878217)
GO_Central
PMID:17878217
NCBI chrNW_004624768:17,422,267...17,522,894
Ensembl chrNW_004624768:17,421,291...17,522,799
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Hnrnpa1
heterogeneous nuclear ribonucleoprotein A1
ISO
RGD
PMID:1703006
RGD:10045979
NCBI chrNW_004624904:2,314,197...2,320,900
Ensembl chrNW_004624904:2,314,249...2,318,791
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Recql
RecQ like helicase
enables
ISO
(PMID:19177149)
GO_Central
PMID:19177149
NCBI chrNW_004624752:17,183,624...17,220,954
Ensembl chrNW_004624752:17,185,129...17,220,707
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Recql4
RecQ like helicase 4
enables
ISO
(PMID:19177149)
GO_Central
PMID:19177149
NCBI chrNW_004624735:12,345,326...12,351,783
Ensembl chrNW_004624735:12,345,844...12,351,637
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Ighmbp2
immunoglobulin mu DNA binding protein 2
enables
ISO
(PMID:8493094)
MGI
PMID:8493094
NCBI chrNW_004624767:18,038,559...18,065,745
Ensembl chrNW_004624767:18,036,650...18,065,742
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Pot1
protection of telomeres 1
enables
ISO
(PMID:19734539)
BHF-UCL
PMID:19734539
NCBI chrNW_004624783:11,138,222...11,223,329
Ensembl chrNW_004624783:11,138,303...11,223,044
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Ctc1
CST telomere replication complex component 1
enables
ISO
(PMID:22763445)
BHF-UCL
PMID:22763445
NCBI chrNW_004624786:10,795,848...10,819,029
Ensembl chrNW_004624786:10,795,193...10,819,613
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Hnrnpa1
heterogeneous nuclear ribonucleoprotein A1
enables
ISO
(PMID:23935072)
BHF-UCL
PMID:23935072
NCBI chrNW_004624904:2,314,197...2,320,900
Ensembl chrNW_004624904:2,314,249...2,318,791
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Hnrnpa2b1
heterogeneous nuclear ribonucleoprotein A2/B1
enables
ISO
PMID:23184978
BHF-UCL
PMID:23184978
RGD:11567256
NCBI chrNW_004624739:4,343,164...4,353,123
Ensembl chrNW_004624739:4,343,246...4,352,066
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Nabp2
nucleic acid binding protein 2
enables
ISO
(PMID:25589350)
BHF-UCL
PMID:25589350
NCBI chrNW_004624802:11,774,237...11,780,822
Ensembl chrNW_004624802:11,774,237...11,780,250
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Pot1
protection of telomeres 1
enables
IEA
TreeGrafter
GO_REF:0000118
NCBI chrNW_004624783:11,138,222...11,223,329
Ensembl chrNW_004624783:11,138,303...11,223,044
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Rpa1
replication protein A1
enables
ISO
(PMID:26041456) (PMID:16973897), (PMID:24747047)
BHF-UCL
PMID:16973897 PMID:24747047 PMID:26041456
NCBI chrNW_004624786:4,547,889...4,604,605
Ensembl chrNW_004624786:4,547,962...4,604,290
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Rpa2
replication protein A2
enables
ISO
(PMID:24747047)
BHF-UCL
PMID:24747047
NCBI chrNW_004624764:11,737,234...11,763,862
Ensembl chrNW_004624764:11,736,129...11,764,080
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Terf1
telomeric repeat binding factor 1
enables
IEA
Ensembl TreeGrafter
GO_REF:0000107 GO_REF:0000118
NCBI chrNW_004624744:18,120,677...18,156,920
Ensembl chrNW_004624744:18,121,687...18,156,989
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Terf2
telomeric repeat binding factor 2
enables
IEA
TreeGrafter
GO_REF:0000118
NCBI chrNW_004624746:16,992,049...17,020,809
Ensembl chrNW_004624746:16,992,110...17,019,857
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Hsf1
heat shock transcription factor 1
ISO
RGD
PMID:21512157
RGD:10402944
NCBI chrNW_004624735:12,536,818...12,562,643
Ensembl chrNW_004624735:12,537,128...12,562,644
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Pcbp1
poly(rC) binding protein 1
enables
ISO
(PMID:15836633)
MGI
PMID:15836633
NCBI chrNW_004624762:3,330,978...3,332,582
G
Hnrnpa2b1
heterogeneous nuclear ribonucleoprotein A2/B1
enables
IEA
TreeGrafter
GO_REF:0000118
NCBI chrNW_004624739:4,343,164...4,353,123
Ensembl chrNW_004624739:4,343,246...4,352,066
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Pot1
protection of telomeres 1
enables
IEA
InterPro
GO_REF:0000002
NCBI chrNW_004624783:11,138,222...11,223,329
Ensembl chrNW_004624783:11,138,303...11,223,044
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Rad50
RAD50 double strand break repair protein
enables
IEA
TreeGrafter
GO_REF:0000118
NCBI chrNW_004624733:39,445,083...39,544,415
Ensembl chrNW_004624733:39,447,461...39,544,409
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Stn1
STN1 subunit of CST complex
enables
IEA
UniProt Ensembl InterPro
GO_REF:0000002 GO_REF:0000104 GO_REF:0000107
NCBI chrNW_004624831:2,999,061...3,030,447
Ensembl chrNW_004624831:2,999,800...3,030,443
Term paths to the root one shortest all shortest one longest all longest one shortest and longest all