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ONTOLOGY REPORT - ANNOTATIONS

Term:single-stranded DNA binding
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Accession:GO:0003697 term browser browse the term
Definition:Binding to single-stranded DNA.
Comment:Note that this term is restricted to those cases where the binding is to a single-stranded DNA molecule, not to one of the stands of double-stranded DNA.
Synonyms:exact_synonym: ssDNA binding
 alt_id: GO:0003698;   GO:0003699


show annotations for term's descendants           Sort by:
single-stranded DNA binding term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ALYREF Aly/REF export factor enables ISO (PMID:10786854) MGI PMID:10786854 NCBI chr 9:398,207...402,787
Ensembl chr 9:399,072...402,721 		JBrowse link
G ANXA1 annexin A1 contributes_to ISO RGD PMID:10548514 PMID:20655937 RGD:2306916 RGD:7421590 NCBI chr 1:84,744,159...84,763,011
Ensembl chr 1:84,744,163...84,763,011 		JBrowse link
G APTX aprataxin enables IBA GO_Central GO_REF:0000033 NCBI chr11:50,111,003...50,155,937
Ensembl chr11:50,113,073...50,132,284 		JBrowse link
G BLM BLM RecQ like helicase enables IEA Ensembl GO_REF:0000107 NCBI chr 3:53,408,120...53,506,728
Ensembl chr 3:53,408,217...53,473,146 		JBrowse link
G BRCA2 BRCA2 DNA repair associated enables ISO (PMID:20729832) RGD
UniProt		 PMID:12228710 PMID:20729832 RGD:632363 NCBI chr25:7,734,450...7,797,851
Ensembl chr25:7,734,453...7,797,815 		JBrowse link
G C1H19orf33 chromosome 1 C19orf33 homolog NOT|enables ISO (PMID:11080599) HGNC-UCL PMID:11080599 NCBI chr 1:114,689,909...114,693,980 JBrowse link
G CNBP CCHC-type zinc finger nucleic acid binding protein ISO RGD PMID:7788528 RGD:632384 NCBI chr20:2,860,915...2,929,307
Ensembl chr20:2,916,624...2,929,303 		JBrowse link
G CRY2 cryptochrome circadian regulator 2 enables IEA Ensembl GO_REF:0000107 NCBI chr18:43,538,335...43,573,651
Ensembl chr18:43,539,612...43,573,875 		JBrowse link
G CTC1 CST telomere replication complex component 1 enables IEA Ensembl
InterPro		 GO_REF:0000002 GO_REF:0000107 NCBI chr 5:33,033,474...33,055,004
Ensembl chr 5:33,033,596...33,055,142 		JBrowse link
G DDX11 DEAD/H-box helicase 11 enables ISO (PMID:9013641) UniProt PMID:9013641 NCBI chr27:42,067,845...42,102,699
Ensembl chr27:42,067,898...42,105,870 		JBrowse link
G DHX36 DEAH-box helicase 36 enables IEA Ensembl GO_REF:0000107 NCBI chr23:48,404,351...48,456,360
Ensembl chr23:48,407,316...48,456,654 		JBrowse link
G DHX9 DExH-box helicase 9 enables IEA Ensembl GO_REF:0000107 NCBI chr 7:16,233,763...16,292,576
Ensembl chr 7:16,233,814...16,292,618 		JBrowse link
G ERCC1 ERCC excision repair 1, endonuclease non-catalytic subunit enables IEA Ensembl GO_REF:0000107 NCBI chr 1:110,130,353...110,146,660
Ensembl chr 1:110,130,481...110,146,602 		JBrowse link
G ERCC4 ERCC excision repair 4, endonuclease catalytic subunit enables IEA InterPro
Ensembl		 GO_REF:0000002 GO_REF:0000107 NCBI chr 6:29,193,192...29,226,935
Ensembl chr 6:29,196,421...29,226,887 		JBrowse link
G ERCC5 ERCC excision repair 5, endonuclease enables IEA InterPro GO_REF:0000002 NCBI chr22:52,339,011...52,372,618 JBrowse link
G FAM111A FAM111 trypsin like peptidase A enables IEA Ensembl GO_REF:0000107 NCBI chr18:37,584,326...37,595,316 JBrowse link
G FBH1 F-box DNA helicase 1 enables IEA Ensembl GO_REF:0000107 NCBI chr 2:30,047,994...30,095,761
Ensembl chr 2:30,048,567...30,095,696 		JBrowse link
G FUBP3 far upstream element binding protein 3 enables IEA Ensembl GO_REF:0000107 NCBI chr 9:53,317,955...53,370,040
Ensembl chr 9:53,317,438...53,370,112 		JBrowse link
G HMCES 5-hydroxymethylcytosine binding, ES cell specific enables IEA Ensembl
InterPro		 GO_REF:0000002 GO_REF:0000107 NCBI chr20:2,808,687...2,831,123
Ensembl chr20:2,808,689...2,830,462 		JBrowse link
G HMGB1 high mobility group box 1 ISO RGD PMID:11024186 RGD:2316830 NCBI chr25:9,431,223...9,558,167
Ensembl chr25:9,431,218...9,558,165 		JBrowse link
G HMGB2 high mobility group box 2 enables ISO (PMID:11754747) AgBase PMID:11754747 NCBI chr25:23,939,024...23,941,720
Ensembl chr25:23,939,027...23,941,606 		JBrowse link
G HNRNPA1 heterogeneous nuclear ribonucleoprotein A1 enables IEA Ensembl GO_REF:0000107 NCBI chr27:1,013,459...1,020,083
Ensembl chr27:1,015,868...1,019,891 		JBrowse link
G HNRNPDL heterogeneous nuclear ribonucleoprotein D like enables ISO (PMID:9538234) UniProt PMID:9538234 NCBI chr32:6,401,266...6,408,006
Ensembl chr32:6,402,762...6,407,845 		JBrowse link
G HNRNPK heterogeneous nuclear ribonucleoprotein K ISO RGD PMID:15361071 RGD:10002777 NCBI chr 1:75,499,334...75,511,525
Ensembl chr 1:75,499,393...75,511,425 		JBrowse link
G HNRNPU heterogeneous nuclear ribonucleoprotein U enables IEA Ensembl GO_REF:0000107 NCBI chr 7:35,832,956...35,842,898
Ensembl chr 7:35,833,988...35,843,754 		JBrowse link
G HROB homologous recombination factor with OB-fold enables IEA Ensembl GO_REF:0000107 NCBI chr 9:19,230,345...19,245,518
Ensembl chr 9:19,230,399...19,245,624 		JBrowse link
G IGHMBP2 immunoglobulin mu DNA binding protein 2 enables ISO (PMID:30218034) UniProt PMID:30218034 NCBI chr18:49,063,748...49,090,625
Ensembl chr18:49,064,609...49,091,453 		JBrowse link
G JCHAIN joining chain of multimeric IgA and IgM contributes_to
enables		 ISO
IEA		 (PMID:21786026) UniProtKB
Ensembl		 PMID:21786026 GO_REF:0000107 NCBI chr13:59,962,604...59,970,812
Ensembl chr13:59,962,994...59,970,751 		JBrowse link
G LOC102156002 BRCA1-associated RING domain protein 1-like enables IEA InterPro GO_REF:0000002 NCBI chr 8:2,420,559...2,423,280 JBrowse link
G LOC119864252 DNA-binding protein SMUBP-2-like enables IEA Ensembl GO_REF:0000107
G LONP1 lon peptidase 1, mitochondrial enables ISO (PMID:12657466) MGI PMID:12657466 NCBI chr20:54,312,678...54,334,142
Ensembl chr20:54,312,678...54,334,141 		JBrowse link
G LRPPRC leucine rich pentatricopeptide repeat containing enables IEA Ensembl GO_REF:0000107 NCBI chr10:46,325,312...46,438,376
Ensembl chr10:46,327,223...46,438,342 		JBrowse link
G MCM10 minichromosome maintenance 10 replication initiation factor enables IEA InterPro GO_REF:0000002 NCBI chr 2:23,288,249...23,344,060
Ensembl chr 2:23,292,253...23,344,719 		JBrowse link
G MCM4 minichromosome maintenance complex component 4 contributes_to
enables		 ISO
IEA		 (PMID:25661590)
(PMID:10567526), (PMID:12207017)		 UniProt
Ensembl		 PMID:10567526 PMID:12207017 PMID:25661590 GO_REF:0000107 NCBI chr29:244,634...261,154
Ensembl chr29:244,656...260,991 		JBrowse link
G MCM6 minichromosome maintenance complex component 6 contributes_to
enables		 ISO
IEA		 (PMID:25661590)
(PMID:12207017)
(PMID:10567526)		 UniProt
Ensembl		 PMID:10567526 PMID:12207017 PMID:25661590 GO_REF:0000107 NCBI chr19:38,627,154...38,660,312
Ensembl chr19:38,627,183...38,660,280 		JBrowse link
G MCM7 minichromosome maintenance complex component 7 contributes_to
enables		 ISO
IEA		 (PMID:25661590)
(PMID:12207017)		 UniProt
Ensembl		 PMID:12207017 PMID:25661590 GO_REF:0000107 NCBI chr 6:9,492,654...9,499,846
Ensembl chr 6:9,492,573...9,499,855 		JBrowse link
G MEIOB meiosis specific with OB-fold enables IEA Ensembl GO_REF:0000107 NCBI chr 6:39,048,335...39,075,957
Ensembl chr 6:39,048,278...39,076,035 		JBrowse link
G MLH1 mutL homolog 1 contributes_to
enables		 ISO
IEA		 (PMID:11809883) HGNC
Ensembl		 PMID:11809883 GO_REF:0000107 NCBI chr23:6,889,108...6,938,117
Ensembl chr23:6,889,135...6,938,116 		JBrowse link
G MMS22L MMS22 like, DNA repair protein enables IEA Ensembl GO_REF:0000107 NCBI chr12:55,584,884...55,713,996
Ensembl chr12:55,588,888...55,713,341 		JBrowse link
G MSH2 mutS homolog 2 contributes_to
enables		 ISO
IEA		 (PMID:11809883) HGNC
Ensembl		 PMID:11809883 GO_REF:0000107 NCBI chr10:49,517,448...49,594,001
Ensembl chr10:49,517,369...49,594,210 		JBrowse link
G MSH3 mutS homolog 3 contributes_to
enables		 ISO
IEA		 (PMID:11809883) HGNC
Ensembl		 PMID:11809883 GO_REF:0000107 NCBI chr 3:26,335,788...26,520,633
Ensembl chr 3:26,336,403...26,518,521 		JBrowse link
G NABP1 nucleic acid binding protein 1 enables IEA Ensembl GO_REF:0000107 NCBI chr37:2,157,357...2,163,812
Ensembl chr37:2,157,356...2,161,091 		JBrowse link
G NABP2 nucleic acid binding protein 2 enables IEA Ensembl GO_REF:0000107 NCBI chr10:546,964...551,360
Ensembl chr10:546,964...551,107 		JBrowse link
G NCL nucleolin ISO RGD PMID:6311246 RGD:9693696 NCBI chr25:43,330,524...43,384,909
Ensembl chr25:43,330,799...43,384,258 		JBrowse link
G NEIL3 nei like DNA glycosylase 3 enables IEA Ensembl GO_REF:0000107 NCBI chr16:52,383,585...52,472,398
Ensembl chr16:52,387,389...52,436,173 		JBrowse link
G NLE1 notchless homolog 1 enables IEA Ensembl GO_REF:0000107 NCBI chr 9:38,222,083...38,230,819
Ensembl chr 9:38,222,051...38,365,621 		JBrowse link
G NME1 non-metastatic cells 1, protein (NM23A) expressed in ISO RGD PMID:12010125 RGD:633207 NCBI chr 9:26,990,336...26,998,895
Ensembl chr 9:26,990,469...26,998,955 		JBrowse link
G NOL12 nucleolar protein 12 ISO RGD PMID:16430885 RGD:8553573 NCBI chr10:26,919,771...26,926,547 JBrowse link
G NUCKS1 nuclear casein kinase and cyclin dependent kinase substrate 1 enables ISO PMID:1627131 ParkinsonsUK-UCL PMID:1627131 RGD:11344951 NCBI chr38:2,157,109...2,188,543
Ensembl chr38:2,160,233...2,170,560 		JBrowse link
G PARK7 Parkinsonism associated deglycase NOT|enables ISO (PMID:22683601) ParkinsonsUK-UCL PMID:22683601 NCBI chr 5:61,576,219...61,592,325
Ensembl chr 5:61,576,069...61,592,303 		JBrowse link
G PCBP1 poly(rC) binding protein 1 enables IEA Ensembl GO_REF:0000107 NCBI chr10:68,686,278...68,687,916 JBrowse link
G PCBP2 poly(rC) binding protein 2 enables ISO (PMID:24026233) MGI PMID:24026233 NCBI chr27:1,736,264...1,759,416 JBrowse link
G PMS2 PMS1 homolog 2, mismatch repair system component contributes_to
enables		 ISO
IEA		 (PMID:11809883) HGNC
Ensembl		 PMID:11809883 GO_REF:0000107 NCBI chr 6:11,411,062...11,438,767
Ensembl chr 6:11,349,453...11,438,940 		JBrowse link
G POLR2H RNA polymerase II, I and III subunit H enables IEA Ensembl GO_REF:0000107 NCBI chr34:17,240,604...17,244,907
Ensembl chr34:17,240,624...17,244,904 		JBrowse link
G POLR3C RNA polymerase III subunit C enables IEA Ensembl
InterPro
UniProt		 GO_REF:0000002 GO_REF:0000104 GO_REF:0000107 NCBI chr17:58,634,299...58,646,056
Ensembl chr17:58,636,244...58,645,838 		JBrowse link
G POU4F1 POU class 4 homeobox 1 enables IEA Ensembl GO_REF:0000107 NCBI chr22:31,992,657...31,997,066 JBrowse link
G PTBP1 polypyrimidine tract binding protein 1 ISO RGD PMID:1561080 RGD:10045981 NCBI chr20:57,806,450...57,818,435
Ensembl chr20:57,807,826...57,818,359 		JBrowse link
G PURA purine rich element binding protein A enables IEA Ensembl GO_REF:0000107 NCBI chr 2:35,325,630...35,345,366
Ensembl chr 2:35,330,902...35,332,835 		JBrowse link
G PURB purine rich element binding protein B enables ISO (PMID:10318844), (PMID:12933792) UniProt PMID:10318844 PMID:12933792
G RAD18 RAD18 E3 ubiquitin protein ligase enables IEA InterPro GO_REF:0000002 NCBI chr20:9,163,322...9,271,224
Ensembl chr20:9,163,428...9,263,730 		JBrowse link
G RAD51 RAD51 recombinase enables IEA
IBA
ISS		 InterPro
GO_Central
Ensembl
UniProt		 GO_REF:0000002 GO_REF:0000024 GO_REF:0000033 GO_REF:0000107 NCBI chr30:7,842,540...7,877,128
Ensembl chr30:7,842,540...7,877,606 		JBrowse link
G RAD51AP1 RAD51 associated protein 1 enables IEA Ensembl GO_REF:0000107 NCBI chr27:40,303,935...40,341,666
Ensembl chr27:40,303,992...40,341,526 		JBrowse link
G RAD51B RAD51 paralog B enables IEA Ensembl GO_REF:0000107 NCBI chr 8:41,779,435...42,357,362
Ensembl chr 8:41,778,714...42,357,298 		JBrowse link
G RAD51D RAD51 paralog D enables IEA Ensembl GO_REF:0000107 NCBI chr 9:38,242,178...38,259,788
Ensembl chr 9:38,222,051...38,365,621 		JBrowse link
G RAD52 RAD52 homolog, DNA repair protein enables IEA Ensembl GO_REF:0000107 NCBI chr27:42,915,334...43,032,293
Ensembl chr27:42,915,634...42,951,323 		JBrowse link
G RADX RPA1 related single stranded DNA binding protein, X-linked enables IEA InterPro
Ensembl		 GO_REF:0000002 GO_REF:0000107 NCBI chr  X:80,146,335...80,234,732
Ensembl chr  X:80,146,040...80,235,739 		JBrowse link
G REXO4 REX4 homolog, 3'-5' exonuclease enables IEA Ensembl GO_REF:0000107 NCBI chr 9:49,827,584...49,834,872
Ensembl chr 9:49,828,067...49,836,632 		JBrowse link
G RFFL ring finger and FYVE like domain containing E3 ubiquitin protein ligase enables IEA Ensembl GO_REF:0000107 NCBI chr 9:38,271,419...38,346,103
Ensembl chr 9:38,222,051...38,365,621 		JBrowse link
G RNF138 ring finger protein 138 enables IEA Ensembl GO_REF:0000107 NCBI chr 7:57,521,416...57,554,793
Ensembl chr 7:57,523,595...57,556,005 		JBrowse link
G RPA1 replication protein A1 enables ISO
IEA		 RGD
Ensembl		 PMID:8463251 GO_REF:0000107 RGD:2307012 NCBI chr 9:45,958,566...46,034,850
Ensembl chr 9:45,958,619...46,034,328 		JBrowse link
G RPA2 replication protein A2 enables ISO
IEA		 RGD
Ensembl		 PMID:8463251 GO_REF:0000107 RGD:2307012 NCBI chr 2:72,463,951...72,479,864
Ensembl chr 2:72,419,459...72,479,227 		JBrowse link
G RPA3 replication protein A3 enables ISO (PMID:19010961) UniProt PMID:19010961 NCBI chr14:23,230,447...23,234,554
Ensembl chr11:2,893,352...2,893,717 		JBrowse link
G RTF1 RTF1 homolog, Paf1/RNA polymerase II complex component enables IEA Ensembl GO_REF:0000107 NCBI chr30:8,468,001...8,524,712
Ensembl chr30:8,467,761...8,522,874 		JBrowse link
G SAMHD1 SAM and HD domain containing deoxynucleoside triphosphate triphosphohydrolase 1 enables IEA Ensembl GO_REF:0000107 NCBI chr24:25,623,997...25,676,336
Ensembl chr24:25,626,134...25,680,902 		JBrowse link
G SETMAR SET domain without mariner transposase fusion enables ISO (PMID:24573677) UniProt PMID:24573677 NCBI chr20:13,214,241...13,224,020
Ensembl chr20:13,214,241...13,224,020 		JBrowse link
G SHOC1 shortage in chiasmata 1 enables ISO (PMID:29742103) UniProt PMID:29742103 NCBI chr11:66,283,093...66,359,674
Ensembl chr11:66,282,572...66,363,922 		JBrowse link
G SMC2 structural maintenance of chromosomes 2 enables IEA Ensembl GO_REF:0000107 NCBI chr11:60,091,728...60,155,295
Ensembl chr11:60,091,457...60,151,442 		JBrowse link
G SMC4 structural maintenance of chromosomes 4 enables IEA Ensembl GO_REF:0000107 NCBI chr34:26,455,630...26,495,392
Ensembl chr34:26,456,142...26,494,725 		JBrowse link
G SPEN spen family transcriptional repressor enables ISO (PMID:10451362) MGI PMID:10451362 NCBI chr 2:81,683,824...81,775,904 JBrowse link
G SPRTN SprT-like N-terminal domain enables IEA InterPro
Ensembl		 GO_REF:0000002 GO_REF:0000107 NCBI chr 4:8,120,151...8,133,402
Ensembl chr 4:8,120,351...8,133,191 		JBrowse link
G SSBP1 single stranded DNA binding protein 1 enables IEA
IBA		 InterPro
Ensembl
GO_Central		 GO_REF:0000002 GO_REF:0000033 GO_REF:0000107 NCBI chr16:7,445,351...7,461,513
Ensembl chr16:7,451,444...7,461,464 		JBrowse link
G SSBP2 single stranded DNA binding protein 2 enables IEA InterPro GO_REF:0000002 NCBI chr 3:25,616,750...25,900,991
Ensembl chr 3:25,616,824...25,900,501 		JBrowse link
G SSBP3 single stranded DNA binding protein 3 enables IEA InterPro GO_REF:0000002 NCBI chr 5:54,690,632...54,826,691
Ensembl chr 5:54,662,840...54,824,960 		JBrowse link
G SSBP4 single stranded DNA binding protein 4 enables IEA InterPro GO_REF:0000002 NCBI chr20:44,599,576...44,613,344
Ensembl chr20:44,598,920...44,613,266 		JBrowse link
G STN1 STN1 subunit of CST complex enables IEA Ensembl GO_REF:0000107 NCBI chr28:16,203,607...16,246,468
Ensembl chr28:16,204,073...16,246,058 		JBrowse link
G SUB1 SUB1 regulator of transcription enables ISO (PMID:8062391)
(PMID:16605275)		 UniProt
CAFA		 PMID:8062391 PMID:16605275 NCBI chr 4:74,931,105...74,951,707
Ensembl chr 4:74,933,620...74,951,573 		JBrowse link
G SWSAP1 SWIM-type zinc finger 7 associated protein 1 enables ISO (PMID:21965664) UniProt PMID:21965664 NCBI chr20:49,951,633...49,953,281
Ensembl chr20:49,951,783...49,953,434 		JBrowse link
G TDP1 tyrosyl-DNA phosphodiesterase 1 enables IEA Ensembl GO_REF:0000107 NCBI chr 8:61,023,564...61,107,599
Ensembl chr 8:61,024,084...61,107,506 		JBrowse link
G TDP2 tyrosyl-DNA phosphodiesterase 2 enables IEA Ensembl GO_REF:0000107 NCBI chr35:22,693,203...22,707,054
Ensembl chr35:22,693,110...22,707,008 		JBrowse link
G TEN1 TEN1 subunit of CST complex enables IEA InterPro GO_REF:0000002 NCBI chr 9:4,635,192...4,658,455
Ensembl chr 9:4,635,354...4,658,252 		JBrowse link
G TOP1 DNA topoisomerase I enables IEA Ensembl GO_REF:0000107 NCBI chr24:29,075,267...29,166,733
Ensembl chr24:29,075,492...29,165,864 		JBrowse link
G TOP3A DNA topoisomerase III alpha enables IEA Ensembl GO_REF:0000107 NCBI chr 5:41,262,820...41,290,101
Ensembl chr 5:41,263,017...41,290,100 		JBrowse link
G TREX1 three prime repair exonuclease 1 enables IEA Ensembl GO_REF:0000107 NCBI chr20:40,624,845...40,626,840
Ensembl chr20:40,624,891...40,626,906 		JBrowse link
G TSN translin contributes_to
enables		 ISO
IEA		 RGD
InterPro		 PMID:9681436 GO_REF:0000002 RGD:634412 NCBI chr19:28,467,513...28,476,444
Ensembl chr19:28,469,463...28,476,313 		JBrowse link
G TSNAX translin associated factor X contributes_to ISO RGD PMID:9681436 RGD:634412 NCBI chr 4:7,937,622...7,968,014
Ensembl chr 4:7,937,820...7,967,889 		JBrowse link
G TWNK twinkle mtDNA helicase enables IEA Ensembl
InterPro		 GO_REF:0000002 GO_REF:0000107 NCBI chr28:13,672,772...13,680,732
Ensembl chr28:13,676,304...13,680,044 		JBrowse link
G WDR48 WD repeat domain 48 enables IEA Ensembl GO_REF:0000107 NCBI chr23:8,716,598...8,766,242
Ensembl chr23:8,715,700...8,764,678 		JBrowse link
G XPC XPC complex subunit, DNA damage recognition and repair factor enables IEA Ensembl GO_REF:0000107 NCBI chr20:4,299,644...4,328,826
Ensembl chr20:4,300,386...4,328,768 		JBrowse link
G YBX1 Y-box binding protein 1 enables ISO (PMID:15282343) MGI PMID:15282343 NCBI chr15:646,301...666,347
Ensembl chr15:646,584...666,329 		JBrowse link
G YBX3 Y-box binding protein 3 ISO RGD PMID:8029009 RGD:632638 NCBI chr27:35,043,756...35,066,230
Ensembl chr27:35,043,699...35,066,227 		JBrowse link
ATP-dependent DNA/DNA annealing activity term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G RAD54L RAD54 like enables IEA Ensembl GO_REF:0000107 NCBI chr15:14,111,168...14,139,819
Ensembl chr15:14,111,157...14,139,301 		JBrowse link
G SMARCA1 SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 1 enables ISO (PMID:22705370) UniProt PMID:22705370 NCBI chr  X:100,678,457...100,749,216
Ensembl chr  X:100,679,942...100,749,651 		JBrowse link
G SMARCAL1 SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a like 1 enables IEA Ensembl GO_REF:0000107 NCBI chr37:23,364,941...23,425,206
Ensembl chr37:23,367,220...23,419,248 		JBrowse link
G TP53 tumor protein p53 enables IEA
ISS		 Ensembl
UniProt		 GO_REF:0000024 GO_REF:0000107 NCBI chr 5:32,561,406...32,565,149
Ensembl chr 5:32,560,598...32,574,109 		JBrowse link
G ZRANB3 zinc finger RANBP2-type containing 3 enables IEA Ensembl GO_REF:0000107 NCBI chr19:38,003,273...38,302,598
Ensembl chr19:37,957,421...38,301,888 		JBrowse link
C-rich single-stranded DNA binding term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G HNRNPK heterogeneous nuclear ribonucleoprotein K ISO RGD PMID:8127654 RGD:728600 NCBI chr 1:75,499,334...75,511,525
Ensembl chr 1:75,499,393...75,511,425 		JBrowse link
G PCBP2 poly(rC) binding protein 2 enables ISO (PMID:8208614) MGI PMID:8208614 NCBI chr27:1,736,264...1,759,416 JBrowse link
G PCBP3 poly(rC) binding protein 3 enables IEA Ensembl GO_REF:0000107 NCBI chr31:39,025,744...39,275,239
Ensembl chr31:39,025,731...39,275,239 		JBrowse link
C-rich strand telomeric DNA binding term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G NABP2 nucleic acid binding protein 2 NOT|enables ISO (PMID:25589350) BHF-UCL PMID:25589350 NCBI chr10:546,964...551,360
Ensembl chr10:546,964...551,107 		JBrowse link
DNA/DNA annealing activity term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ANXA1 annexin A1 ISO RGD PMID:20655937 RGD:7421590 NCBI chr 1:84,744,159...84,763,011
Ensembl chr 1:84,744,163...84,763,011 		JBrowse link
G BLM BLM RecQ like helicase enables IEA Ensembl GO_REF:0000107 NCBI chr 3:53,408,120...53,506,728
Ensembl chr 3:53,408,217...53,473,146 		JBrowse link
G HNRNPA1 heterogeneous nuclear ribonucleoprotein A1 ISO RGD PMID:1703006 RGD:10045979 NCBI chr27:1,013,459...1,020,083
Ensembl chr27:1,015,868...1,019,891 		JBrowse link
G RECQL RecQ like helicase enables IEA Ensembl GO_REF:0000107 NCBI chr27:25,590,326...25,636,304
Ensembl chr27:25,590,831...25,636,685 		JBrowse link
G RECQL4 RecQ like helicase 4 enables IEA Ensembl GO_REF:0000107 NCBI chr13:37,930,906...37,936,653
Ensembl chr13:37,930,621...37,936,753 		JBrowse link
G-rich single-stranded DNA binding term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G IGHMBP2 immunoglobulin mu DNA binding protein 2 enables ISO (PMID:8493094) MGI PMID:8493094 NCBI chr18:49,063,748...49,090,625
Ensembl chr18:49,064,609...49,091,453 		JBrowse link
G POT1 protection of telomeres 1 enables IEA Ensembl GO_REF:0000107 NCBI chr14:10,987,385...11,067,473
Ensembl chr14:10,987,494...11,066,956 		JBrowse link
G-rich strand telomeric DNA binding term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G CTC1 CST telomere replication complex component 1 enables IEA Ensembl GO_REF:0000107 NCBI chr 5:33,033,474...33,055,004
Ensembl chr 5:33,033,596...33,055,142 		JBrowse link
G HNRNPA1 heterogeneous nuclear ribonucleoprotein A1 enables IEA Ensembl GO_REF:0000107 NCBI chr27:1,013,459...1,020,083
Ensembl chr27:1,015,868...1,019,891 		JBrowse link
G HNRNPA2B1 heterogeneous nuclear ribonucleoprotein A2/B1 enables ISO PMID:23184978 BHF-UCL PMID:23184978 RGD:11567256 NCBI chr14:39,498,805...39,509,034
Ensembl chr14:39,500,897...39,508,952 		JBrowse link
G NABP2 nucleic acid binding protein 2 enables IEA Ensembl GO_REF:0000107 NCBI chr10:546,964...551,360
Ensembl chr10:546,964...551,107 		JBrowse link
G POT1 protection of telomeres 1 enables IEA Ensembl GO_REF:0000107 NCBI chr14:10,987,385...11,067,473
Ensembl chr14:10,987,494...11,066,956 		JBrowse link
G RPA1 replication protein A1 enables IEA Ensembl GO_REF:0000107 NCBI chr 9:45,958,566...46,034,850
Ensembl chr 9:45,958,619...46,034,328 		JBrowse link
G RPA2 replication protein A2 enables IEA Ensembl GO_REF:0000107 NCBI chr 2:72,463,951...72,479,864
Ensembl chr 2:72,419,459...72,479,227 		JBrowse link
G TERF1 telomeric repeat binding factor 1 enables IEA Ensembl GO_REF:0000107 NCBI chr29:21,664,378...21,701,491
Ensembl chr29:21,664,186...21,700,495 		JBrowse link
G TERF2 telomeric repeat binding factor 2 enables IEA Ensembl GO_REF:0000107 NCBI chr 5:80,278,224...80,305,315
Ensembl chr 5:80,277,505...80,306,342 		JBrowse link
G TERF2IP TERF2 interacting protein enables IEA Ensembl GO_REF:0000107 NCBI chr 5:75,164,410...75,172,959
Ensembl chr 5:75,165,191...75,172,838 		JBrowse link
sequence-specific single stranded DNA binding term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G HSF1 heat shock transcription factor 1 ISO RGD PMID:21512157 RGD:10402944 NCBI chr13:37,724,741...37,745,259
Ensembl chr13:37,724,759...37,745,252 		JBrowse link
G PCBP1 poly(rC) binding protein 1 enables IEA Ensembl GO_REF:0000107 NCBI chr10:68,686,278...68,687,916 JBrowse link
single-stranded telomeric DNA binding term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G HNRNPA2B1 heterogeneous nuclear ribonucleoprotein A2/B1 enables IEA Ensembl GO_REF:0000107 NCBI chr14:39,498,805...39,509,034
Ensembl chr14:39,500,897...39,508,952 		JBrowse link
G POT1 protection of telomeres 1 enables IEA InterPro
Ensembl		 GO_REF:0000002 GO_REF:0000107 NCBI chr14:10,987,385...11,067,473
Ensembl chr14:10,987,494...11,066,956 		JBrowse link
G SH3PXD2A SH3 and PX domains 2A enables IEA InterPro GO_REF:0000002 NCBI chr28:15,936,927...16,165,537
Ensembl chr28:15,943,097...16,117,710 		JBrowse link
G STN1 STN1 subunit of CST complex enables IEA InterPro
UniProt
Ensembl		 GO_REF:0000002 GO_REF:0000104 GO_REF:0000107 NCBI chr28:16,203,607...16,246,468
Ensembl chr28:16,204,073...16,246,058 		JBrowse link
Term paths to the root
Path 1
Term Annotations click to browse term
  molecular_function 18610
    binding 16450
      organic cyclic compound binding 5631
        nucleic acid binding 3495
          DNA binding 2145
            single-stranded DNA binding 115
              C-rich single-stranded DNA binding 3
              DNA/DNA annealing activity + 10
              G-rich single-stranded DNA binding 2
              sequence-specific single stranded DNA binding + 14
paths to the root