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ONTOLOGY REPORT - ANNOTATIONS

Term:single-stranded DNA binding
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Accession:GO:0003697 term browser browse the term
Definition:Binding to single-stranded DNA.
Comment:Note that this term is restricted to those cases where the binding is to a single-stranded DNA molecule, not to one of the stands of double-stranded DNA.
Synonyms:exact_synonym: ssDNA binding
 alt_id: GO:0003698;   GO:0003699

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single-stranded DNA binding term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Alyref Aly/REF export factor enables ISO (PMID:10786854) MGI PMID:10786854 NCBI chrNW_004955506:1,278,230...1,282,064
Ensembl chrNW_004955506:1,278,471...1,281,772 		JBrowse link
G Anxa1 annexin A1 contributes_to ISO RGD PMID:10548514 PMID:20655937 RGD:2306916 RGD:7421590 NCBI chrNW_004955512:5,686,508...5,703,645 JBrowse link
G Blm BLM RecQ like helicase enables ISO (PMID:12818200), (PMID:20639533) UniProt PMID:12818200 PMID:20639533 NCBI chrNW_004955416:14,814,753...14,899,865
Ensembl chrNW_004955416:14,842,033...14,899,687 		JBrowse link
G Brca2 BRCA2 DNA repair associated enables ISO (PMID:20729832) RGD
UniProt		 PMID:12228710 PMID:20729832 RGD:632363 NCBI chrNW_004955431:13,449,287...13,526,878
Ensembl chrNW_004955431:13,449,543...13,527,432 		JBrowse link
G Cnbp CCHC-type zinc finger nucleic acid binding protein ISO RGD PMID:7788528 RGD:632384 NCBI chrNW_004955429:13,537,222...13,582,026
Ensembl chrNW_004955429:13,537,222...13,549,520 		JBrowse link
G Cry2 cryptochrome circadian regulator 2 enables ISO (PMID:12627958) UniProt PMID:12627958 NCBI chrNW_004955422:2,084,020...2,114,980
Ensembl chrNW_004955422:2,083,138...2,115,072 		JBrowse link
G Ctc1 CST telomere replication complex component 1 enables ISO (PMID:19119139) UniProt PMID:19119139 NCBI chrNW_004955467:8,673,069...8,700,730
Ensembl chrNW_004955467:8,673,128...8,702,165 		JBrowse link
G Ddx11 DEAD/H-box helicase 11 enables ISO (PMID:9013641) UniProt PMID:9013641 NCBI chrNW_004955524:1,932,988...1,957,231
Ensembl chrNW_004955524:1,932,729...1,957,231 		JBrowse link
G Dhx36 DEAH-box helicase 36 enables ISO (PMID:20696886) UniProt PMID:20696886 NCBI chrNW_004955448:5,634,072...5,676,272
Ensembl chrNW_004955448:5,634,072...5,676,319 		JBrowse link
G Dhx9 DExH-box helicase 9 enables ISO (PMID:10198287), (PMID:20696886), (PMID:21957149), (PMID:9111062) UniProt PMID:9111062 PMID:10198287 PMID:20696886 PMID:21957149 NCBI chrNW_004955406:21,697,813...21,743,551
Ensembl chrNW_004955406:21,697,813...21,745,011 		JBrowse link
G Ercc1 ERCC excision repair 1, endonuclease non-catalytic subunit enables ISO (PMID:16076955), (PMID:17720715) UniProt PMID:16076955 PMID:17720715 NCBI chrNW_004955555:2,393,510...2,430,180
Ensembl chrNW_004955555:2,393,278...2,406,582 		JBrowse link
G Ercc4 ERCC excision repair 4, endonuclease catalytic subunit enables ISO (PMID:10413517) UniProt PMID:10413517 NCBI chrNW_004955442:4,833,453...4,861,201
Ensembl chrNW_004955442:4,831,721...4,861,122 		JBrowse link
G Ercc5 ERCC excision repair 5, endonuclease enables ISO (PMID:12644470) UniProt PMID:12644470 NCBI chrNW_004955404:8,294,506...8,321,505
Ensembl chrNW_004955404:8,294,346...8,321,112 		JBrowse link
G Fam111a FAM111 trypsin like peptidase A enables ISO (PMID:32165630) UniProt PMID:32165630 NCBI chrNW_004955511:3,722,483...3,736,001
Ensembl chrNW_004955511:3,731,116...3,740,140 		JBrowse link
G Fbh1 F-box DNA helicase 1 enables ISO (PMID:19736316), (PMID:23393192) UniProt PMID:19736316 PMID:23393192 NCBI chrNW_004955421:22,535,777...22,579,965
Ensembl chrNW_004955421:22,535,777...22,579,965 		JBrowse link
G Fubp3 far upstream element binding protein 3 enables ISO (PMID:8940189) MGI PMID:8940189 NCBI chrNW_004955513:548,202...595,427
Ensembl chrNW_004955513:548,139...595,479 		JBrowse link
G Hmces 5-hydroxymethylcytosine binding, ES cell specific enables ISO (PMID:30554877), (PMID:31235913)
(PMID:31806351)		 UniProt PMID:30554877 PMID:31235913 PMID:31806351 NCBI chrNW_004955429:13,616,647...13,638,657
Ensembl chrNW_004955429:13,616,647...13,661,389 		JBrowse link
G Hmgb1 high mobility group box 1 ISO RGD PMID:11024186 RGD:2316830 NCBI chrNW_004955431:15,373,207...15,377,339
Ensembl chrNW_004955431:15,373,207...15,377,339 		JBrowse link
G Hmgb2 high mobility group box 2 enables ISO (PMID:11754747) AgBase PMID:11754747 NCBI chrNW_004955403:33,656,314...33,659,115
Ensembl chrNW_004955403:33,656,300...33,659,428 		JBrowse link
G Hnrnpa1 heterogeneous nuclear ribonucleoprotein A1 enables ISO (PMID:8521471) HGNC-UCL PMID:8521471 NCBI chrNW_004955458:1,530,163...1,536,874 JBrowse link
G Hnrnpdl heterogeneous nuclear ribonucleoprotein D like enables ISO (PMID:9538234) UniProt PMID:9538234 NCBI chrNW_004955433:6,515,509...6,522,081
Ensembl chrNW_004955433:6,512,399...6,522,377 		JBrowse link
G Hnrnpk heterogeneous nuclear ribonucleoprotein K ISO RGD PMID:15361071 RGD:10002777 NCBI chrNW_004955432:3,246,090...3,257,774
Ensembl chrNW_004955432:3,246,092...3,257,774 		JBrowse link
G Hnrnpu heterogeneous nuclear ribonucleoprotein U enables ISO (PMID:1628625), (PMID:8068679), (PMID:8174554) UniProt PMID:1628625 PMID:8068679 PMID:8174554 NCBI chrNW_004955406:8,000,269...8,021,554
Ensembl chrNW_004955406:8,000,269...8,021,554 		JBrowse link
G Hrob homologous recombination factor with OB-fold enables ISO (PMID:31467087) UniProt PMID:31467087 NCBI chrNW_004955451:17,256,593...17,264,872 JBrowse link
G Ighmbp2 immunoglobulin mu DNA binding protein 2 enables ISO (PMID:30218034) UniProt PMID:30218034 NCBI chrNW_004955422:17,017,855...17,047,724
Ensembl chrNW_004955422:17,017,358...17,048,650 		JBrowse link
G Jchain joining chain of multimeric IgA and IgM contributes_to ISO (PMID:21786026) UniProtKB PMID:21786026 NCBI chrNW_004955447:2,292,387...2,321,596
Ensembl chrNW_004955447:2,313,808...2,321,663 		JBrowse link
G LOC102016906 chromosome unknown open reading frame, human C19orf33 NOT|enables ISO (PMID:11080599) HGNC-UCL PMID:11080599 NCBI chrNW_004955468:1,133,370...1,134,242 JBrowse link
G LOC102020128 histone-lysine N-methyltransferase SETMAR enables ISO (PMID:24573677) UniProt PMID:24573677 NCBI chrNW_004955421:9,066,906...9,080,352 JBrowse link
G Lonp1 lon peptidase 1, mitochondrial enables ISO (PMID:12657466) MGI PMID:12657466 NCBI chrNW_004955495:3,712,173...3,729,556
Ensembl chrNW_004955495:3,712,199...3,731,301 		JBrowse link
G Lrpprc leucine rich pentatricopeptide repeat containing enables ISO (PMID:12071956) MGI PMID:12071956 NCBI chrNW_004955441:11,012,910...11,116,965 JBrowse link
G Mcm4 minichromosome maintenance complex component 4 contributes_to
enables		 ISO (PMID:25661590)
(PMID:10567526), (PMID:12207017)
(PMID:15917436)		 UniProt
MGI		 PMID:10567526 PMID:12207017 PMID:15917436 PMID:25661590 NCBI chrNW_004955454:7,891,646...7,908,240
Ensembl chrNW_004955454:7,891,456...7,908,462 		JBrowse link
G Mcm6 minichromosome maintenance complex component 6 contributes_to
enables		 ISO (PMID:25661590)
(PMID:12207017)
(PMID:10567526)
(PMID:15917436)		 UniProt
MGI		 PMID:10567526 PMID:12207017 PMID:15917436 PMID:25661590 NCBI chrNW_004955440:3,200,803...3,234,437
Ensembl chrNW_004955440:3,200,803...3,234,437 		JBrowse link
G Mcm7 minichromosome maintenance complex component 7 contributes_to
enables		 ISO (PMID:25661590)
(PMID:12207017)
(PMID:15917436)		 UniProt
MGI		 PMID:12207017 PMID:15917436 PMID:25661590 NCBI chrNW_004955573:763,358...770,782
Ensembl chrNW_004955573:763,358...775,489 		JBrowse link
G Meiob meiosis specific with OB-fold enables ISO (PMID:24068956), (PMID:24240703) UniProt PMID:24068956 PMID:24240703 NCBI chrNW_004955442:15,409,344...15,444,996
Ensembl chrNW_004955442:15,409,344...15,444,996 		JBrowse link
G Mlh1 mutL homolog 1 contributes_to ISO (PMID:11809883) HGNC PMID:11809883 NCBI chrNW_004955421:3,890,291...3,936,892
Ensembl chrNW_004955421:3,890,306...3,936,526 		JBrowse link
G Mms22l MMS22 like, DNA repair protein enables ISO (PMID:27797818) UniProt PMID:27797818 NCBI chrNW_004955411:23,125,203...23,245,941
Ensembl chrNW_004955411:23,125,121...23,245,950 		JBrowse link
G Msh2 mutS homolog 2 contributes_to ISO (PMID:11809883) HGNC PMID:11809883 NCBI chrNW_004955441:14,188,315...14,247,608
Ensembl chrNW_004955441:14,187,805...14,247,698 		JBrowse link
G Msh3 mutS homolog 3 contributes_to ISO (PMID:11809883) HGNC PMID:11809883 NCBI chrNW_004955418:29,149,595...29,274,067
Ensembl chrNW_004955418:29,150,085...29,274,437 		JBrowse link
G Nabp1 nucleic acid binding protein 1 enables ISO (PMID:16533169) MGI PMID:16533169 NCBI chrNW_004955403:7,603,002...7,610,925
Ensembl chrNW_004955403:7,604,144...7,611,042 		JBrowse link
G Nabp2 nucleic acid binding protein 2 enables ISO (PMID:18449195), (PMID:19683501) UniProt PMID:18449195 PMID:19683501 NCBI chrNW_004955458:3,835,205...3,836,841
Ensembl chrNW_004955458:3,835,205...3,840,634 		JBrowse link
G Ncl nucleolin ISO RGD PMID:6311246 RGD:9693696 NCBI chrNW_004955453:4,154,627...4,164,253
Ensembl chrNW_004955453:4,154,627...4,164,253 		JBrowse link
G Neil3 nei like DNA glycosylase 3 enables ISO (PMID:19170771)
(PMID:20185759)		 UniProt PMID:19170771 PMID:20185759 NCBI chrNW_004955403:30,549,779...30,591,757
Ensembl chrNW_004955403:30,549,740...30,591,821 		JBrowse link
G Nol12 nucleolar protein 12 ISO RGD PMID:16430885 RGD:8553573 NCBI chrNW_004955413:24,079,183...24,085,008
Ensembl chrNW_004955413:24,078,349...24,086,210 		JBrowse link
G Nucks1 nuclear casein kinase and cyclin dependent kinase substrate 1 enables ISO PMID:1627131 ParkinsonsUK-UCL PMID:1627131 RGD:11344951 NCBI chrNW_004955406:41,412,855...41,448,551
Ensembl chrNW_004955406:41,417,983...41,449,177 		JBrowse link
G Park7 Parkinsonism associated deglycase NOT|enables ISO (PMID:22683601) ParkinsonsUK-UCL PMID:22683601 NCBI chrNW_004955486:4,974,130...4,985,927
Ensembl chrNW_004955486:4,969,497...4,985,885 		JBrowse link
G Pcbp1 poly(rC) binding protein 1 enables ISO (PMID:8152927)
(PMID:15836633)		 UniProt
MGI		 PMID:8152927 PMID:15836633 NCBI chrNW_004955424:15,045,642...15,047,184
Ensembl chrNW_004955424:15,046,011...15,047,081 		JBrowse link
G Pcbp2 poly(rC) binding protein 2 enables ISO (PMID:24026233) MGI PMID:24026233 NCBI chrNW_004955458:747,770...773,885
Ensembl chrNW_004955458:750,226...773,483 		JBrowse link
G Pms2 PMS1 homolog 2, mismatch repair system component contributes_to ISO (PMID:11809883) HGNC PMID:11809883 NCBI chrNW_004955460:13,762,854...13,791,462 JBrowse link
G Polr2h RNA polymerase II, I and III subunit H enables ISO (PMID:16632472) CAFA PMID:16632472 NCBI chrNW_004955420:23,132,053...23,136,954
Ensembl chrNW_004955420:23,131,297...23,136,800 		JBrowse link
G Polr3c RNA polymerase III subunit C enables ISO (PMID:21358628) UniProt PMID:21358628 NCBI chrNW_004955568:242,834...263,053
Ensembl chrNW_004955568:243,073...261,418 		JBrowse link
G Pou4f1 POU class 4 homeobox 1 enables ISO (PMID:8621561) UniProt PMID:8621561 NCBI chrNW_004955404:28,812,762...28,818,024 JBrowse link
G Ptbp1 polypyrimidine tract binding protein 1 ISO RGD PMID:1561080 RGD:10045981 NCBI chrNW_004955495:6,990,565...7,002,492
Ensembl chrNW_004955495:6,987,182...7,002,492 		JBrowse link
G Pura purine rich element binding protein A enables ISO (PMID:10318844), (PMID:12933792) UniProt PMID:10318844 PMID:12933792 NCBI chrNW_004955418:538,883...548,605 JBrowse link
G Purb purine rich element binding protein B enables ISO (PMID:10318844), (PMID:12933792) UniProt PMID:10318844 PMID:12933792 NCBI chrNW_004955456:7,322,973...7,323,529 JBrowse link
G Rad51 RAD51 recombinase enables ISO (PMID:7988572)
(PMID:22778135)
(PMID:26681308)		 UniProt
MGI		 PMID:7988572 PMID:22778135 PMID:26681308 NCBI chrNW_004955416:7,566,715...7,590,628
Ensembl chrNW_004955416:7,566,686...7,590,628 		JBrowse link
G Rad51ap1 RAD51 associated protein 1 enables ISO (PMID:17996711), (PMID:9396801) UniProt PMID:9396801 PMID:17996711 NCBI chrNW_004955413:2,335,431...2,362,781
Ensembl chrNW_004955413:2,334,911...2,361,806 		JBrowse link
G Rad51b RAD51 paralog B enables ISO (PMID:12441335) UniProt PMID:12441335 NCBI chrNW_004955466:1,686,472...2,388,146
Ensembl chrNW_004955466:2,137,192...2,381,450 		JBrowse link
G Rad51d RAD51 paralog D enables ISO (PMID:10871607) UniProt PMID:10871607 NCBI chrNW_004955481:9,795,102...9,810,426
Ensembl chrNW_004955481:9,795,102...9,810,426 		JBrowse link
G Rad52 RAD52 homolog, DNA repair protein enables ISO (PMID:12370410) CAFA PMID:12370410 NCBI chrNW_004955454:6,206,195...6,227,859
Ensembl chrNW_004955454:6,215,129...6,231,726 		JBrowse link
G Rexo4 REX4 homolog, 3'-5' exonuclease enables ISO (PMID:21602889) ARUK-UCL PMID:21602889 NCBI chrNW_004955513:2,745,220...2,754,927
Ensembl chrNW_004955513:2,745,842...2,752,792 		JBrowse link
G Rnf138 ring finger protein 138 enables ISO (PMID:26502055) UniProt PMID:26502055 NCBI chrNW_004955402:19,344,480...19,358,799
Ensembl chrNW_004955402:19,330,961...19,358,799 		JBrowse link
G Rpa1 replication protein A1 enables ISO (PMID:19010961), (PMID:8990123) RGD
UniProt		 PMID:8463251 PMID:8990123 PMID:19010961 RGD:2307012 NCBI chrNW_004955481:1,304,035...1,361,806 JBrowse link
G Rpa2 replication protein A2 enables ISO (PMID:19010961) RGD
UniProt		 PMID:8463251 PMID:19010961 RGD:2307012 NCBI chrNW_004955452:7,080,641...7,098,009
Ensembl chrNW_004955452:7,080,579...7,097,742 		JBrowse link
G Rpa3 replication protein A3 enables ISO (PMID:19010961) UniProt PMID:19010961 NCBI chrNW_004955432:14,723,933...14,727,356
Ensembl chrNW_004955432:14,723,751...14,727,290 		JBrowse link
G Rtf1 RTF1 homolog, Paf1/RNA polymerase II complex component enables ISO (PMID:18184592) UniProt PMID:18184592 NCBI chrNW_004955416:8,237,439...8,293,802
Ensembl chrNW_004955416:8,237,439...8,293,802 		JBrowse link
G Samhd1 SAM and HD domain containing deoxynucleoside triphosphate triphosphohydrolase 1 enables ISO (PMID:29670289) UniProt PMID:29670289 NCBI chrNW_004955422:24,714,103...24,780,672
Ensembl chrNW_004955422:24,735,161...24,778,830 		JBrowse link
G Shoc1 shortage in chiasmata 1 enables ISO (PMID:29742103) UniProt PMID:29742103 NCBI chrNW_004955419:15,563,949...15,644,502
Ensembl chrNW_004955419:15,566,339...15,646,184 		JBrowse link
G Smc2 structural maintenance of chromosomes 2 enables ISO (PMID:20139420) MGI PMID:20139420 NCBI chrNW_004955419:22,245,843...22,294,508
Ensembl chrNW_004955419:22,245,843...22,294,508 		JBrowse link
G Smc4 structural maintenance of chromosomes 4 enables ISO (PMID:20139420) MGI PMID:20139420 NCBI chrNW_004955448:10,926,653...10,960,624
Ensembl chrNW_004955448:10,927,877...10,960,624 		JBrowse link
G Spen spen family transcriptional repressor enables ISO (PMID:10451362) MGI PMID:10451362 NCBI chrNW_004955527:2,279,438...2,343,263
Ensembl chrNW_004955527:2,280,459...2,343,262 		JBrowse link
G Sprtn SprT-like N-terminal domain enables ISO (PMID:27871365), (PMID:32649882) UniProt PMID:27871365 PMID:32649882 NCBI chrNW_004955492:7,463,228...7,476,683
Ensembl chrNW_004955492:7,464,959...7,476,458 		JBrowse link
G Ssbp1 single stranded DNA binding protein 1 enables ISO (PMID:21953457)
(PMID:26446790), (PMID:31550240)		 UniProt PMID:21953457 PMID:26446790 PMID:31550240 NCBI chrNW_004955494:1,807,885...1,826,375
Ensembl chrNW_004955494:1,814,106...1,826,375 		JBrowse link
G Stn1 STN1 subunit of CST complex enables ISO (PMID:19119139) UniProt PMID:19119139 NCBI chrNW_004955485:6,748,682...6,784,119
Ensembl chrNW_004955485:6,748,234...6,784,762 		JBrowse link
G Sub1 SUB1 regulator of transcription enables ISO (PMID:8062391)
(PMID:16605275)		 UniProt
CAFA		 PMID:8062391 PMID:16605275 NCBI chrNW_004955426:18,380,680...18,394,627
Ensembl chrNW_004955426:18,380,117...18,394,627 		JBrowse link
G Swsap1 SWIM-type zinc finger 7 associated protein 1 enables ISO (PMID:21965664) UniProt PMID:21965664 NCBI chrNW_004955495:2,289,401...2,291,184
Ensembl chrNW_004955495:2,289,379...2,291,848 		JBrowse link
G Tdp1 tyrosyl-DNA phosphodiesterase 1 enables ISO (PMID:15811850) UniProt PMID:15811850 NCBI chrNW_004955438:12,421,790...12,510,243
Ensembl chrNW_004955438:12,421,005...12,511,493 		JBrowse link
G Tdp2 tyrosyl-DNA phosphodiesterase 2 enables ISO (PMID:22822062) UniProt PMID:22822062 NCBI chrNW_004955483:2,375,213...2,385,354
Ensembl chrNW_004955483:2,375,313...2,388,892 		JBrowse link
G Top1 DNA topoisomerase I enables ISO (PMID:8631794) CAFA PMID:8631794 NCBI chrNW_004955445:15,834,017...15,922,785
Ensembl chrNW_004955445:15,834,017...15,922,785 		JBrowse link
G Top3a DNA topoisomerase III alpha enables ISO (PMID:29290614) UniProt PMID:29290614 NCBI chrNW_004955478:11,015,378...11,045,717
Ensembl chrNW_004955478:11,015,378...11,045,717 		JBrowse link
G Trex1 three prime repair exonuclease 1 enables ISO (PMID:17293595), (PMID:17355961) MGI PMID:17293595 PMID:17355961 NCBI chrNW_004955532:533,877...535,767
Ensembl chrNW_004955532:533,877...535,767 		JBrowse link
G Tsn translin contributes_to ISO RGD PMID:9681436 RGD:634412 NCBI chrNW_004955459:8,285,442...8,299,329
Ensembl chrNW_004955459:8,285,442...8,299,397 		JBrowse link
G Tsnax translin associated factor X contributes_to ISO RGD PMID:9681436 RGD:634412 NCBI chrNW_004955492:7,304,982...7,335,512
Ensembl chrNW_004955492:7,306,364...7,335,282 		JBrowse link
G Twnk twinkle mtDNA helicase enables ISO (PMID:18971204) UniProt PMID:18971204 NCBI chrNW_004955485:9,193,838...9,198,697
Ensembl chrNW_004955485:9,191,919...9,198,697 		JBrowse link
G Wdr48 WD repeat domain 48 enables ISO (PMID:27239033) UniProt PMID:27239033 NCBI chrNW_004955427:24,873,616...24,917,691
Ensembl chrNW_004955427:24,873,616...24,917,691 		JBrowse link
G Xpc XPC complex subunit, DNA damage recognition and repair factor enables ISO (PMID:12509299) UniProt PMID:12509299 NCBI chrNW_004955429:16,935,901...16,968,285
Ensembl chrNW_004955429:16,935,901...16,955,845 		JBrowse link
G Ybx1 Y-box binding protein 1 enables ISO (PMID:15282343) MGI PMID:15282343 NCBI chrNW_004955537:2,234,052...2,254,528
Ensembl chrNW_004955537:2,234,054...2,251,708 		JBrowse link
G Ybx3 Y-box binding protein 3 ISO RGD PMID:8029009 RGD:632638 NCBI chrNW_004955413:7,090,085...7,111,542
Ensembl chrNW_004955413:7,089,719...7,108,473 		JBrowse link
ATP-dependent DNA/DNA annealing activity term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Rad54l RAD54 like enables ISO (PMID:22705370) UniProt PMID:22705370 NCBI chrNW_004955464:11,996,512...12,033,525
Ensembl chrNW_004955464:11,996,512...12,033,490 		JBrowse link
G Smarca1 SNF2 related chromatin remodeling ATPase 1 enables ISO (PMID:22705370) UniProt PMID:22705370 NCBI chrNW_004955473:5,498,738...5,572,863
Ensembl chrNW_004955473:5,498,674...5,573,169 		JBrowse link
G Smarcal1 SNF2 related chromatin remodeling annealing helicase 1 enables ISO (PMID:18974355)
(PMID:22705370)		 UniProt PMID:18974355 PMID:22705370 NCBI chrNW_004955453:16,724,286...16,784,129
Ensembl chrNW_004955453:16,719,931...16,784,709 		JBrowse link
G Tp53 tumor protein p53 enables ISO (PMID:8183576) UniProt PMID:8183576 NCBI chrNW_004955467:9,241,391...9,256,716
Ensembl chrNW_004955467:9,252,130...9,255,928 		JBrowse link
G Zranb3 zinc finger RANBP2-type containing 3 enables ISO (PMID:21078962), (PMID:22704558), (PMID:22705370) UniProt PMID:21078962 PMID:22704558 PMID:22705370 NCBI chrNW_004955440:2,683,041...2,907,859
Ensembl chrNW_004955440:2,680,787...2,888,345 		JBrowse link
C-rich single-stranded DNA binding term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Hnrnpk heterogeneous nuclear ribonucleoprotein K ISO RGD PMID:8127654 RGD:728600 NCBI chrNW_004955432:3,246,090...3,257,774
Ensembl chrNW_004955432:3,246,092...3,257,774 		JBrowse link
G Pcbp2 poly(rC) binding protein 2 enables ISO (PMID:8208614) MGI PMID:8208614 NCBI chrNW_004955458:747,770...773,885
Ensembl chrNW_004955458:750,226...773,483 		JBrowse link
G Pcbp3 poly(rC) binding protein 3 enables ISO (PMID:22521865) MGI PMID:22521865 NCBI chrNW_004955407:42,395,149...42,447,312
Ensembl chrNW_004955407:42,377,972...42,446,722 		JBrowse link
C-rich strand telomeric DNA binding term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Nabp2 nucleic acid binding protein 2 NOT|enables ISO (PMID:25589350) BHF-UCL PMID:25589350 NCBI chrNW_004955458:3,835,205...3,836,841
Ensembl chrNW_004955458:3,835,205...3,840,634 		JBrowse link
DNA/DNA annealing activity term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Anxa1 annexin A1 ISO RGD PMID:20655937 RGD:7421590 NCBI chrNW_004955512:5,686,508...5,703,645 JBrowse link
G Blm BLM RecQ like helicase enables ISO (PMID:17878217) GO_Central PMID:17878217 NCBI chrNW_004955416:14,814,753...14,899,865
Ensembl chrNW_004955416:14,842,033...14,899,687 		JBrowse link
G Hnrnpa1 heterogeneous nuclear ribonucleoprotein A1 ISO RGD PMID:1703006 RGD:10045979 NCBI chrNW_004955458:1,530,163...1,536,874 JBrowse link
G Recql RecQ like helicase enables ISO (PMID:19177149) GO_Central PMID:19177149 NCBI chrNW_004955413:17,115,443...17,148,708
Ensembl chrNW_004955413:17,113,408...17,148,708 		JBrowse link
G Recql4 RecQ like helicase 4 enables ISO (PMID:19177149) GO_Central PMID:19177149 NCBI chrNW_004955454:3,136,097...3,142,525
Ensembl chrNW_004955454:3,136,216...3,142,422 		JBrowse link
G-rich single-stranded DNA binding term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ighmbp2 immunoglobulin mu DNA binding protein 2 enables ISO (PMID:8493094) MGI PMID:8493094 NCBI chrNW_004955422:17,017,855...17,047,724
Ensembl chrNW_004955422:17,017,358...17,048,650 		JBrowse link
G Pot1 protection of telomeres 1 enables ISO (PMID:19734539) BHF-UCL PMID:19734539 NCBI chrNW_004955479:6,140,599...6,230,512
Ensembl chrNW_004955479:6,140,501...6,209,031 		JBrowse link
G-rich strand telomeric DNA binding term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ctc1 CST telomere replication complex component 1 enables ISO (PMID:22763445) BHF-UCL PMID:22763445 NCBI chrNW_004955467:8,673,069...8,700,730
Ensembl chrNW_004955467:8,673,128...8,702,165 		JBrowse link
G Hnrnpa1 heterogeneous nuclear ribonucleoprotein A1 enables ISO (PMID:23935072) BHF-UCL PMID:23935072 NCBI chrNW_004955458:1,530,163...1,536,874 JBrowse link
G Hnrnpa2b1 heterogeneous nuclear ribonucleoprotein A2/B1 enables ISO PMID:23184978 BHF-UCL PMID:23184978 RGD:11567256 NCBI chrNW_004955410:28,032,193...28,042,459
Ensembl chrNW_004955410:28,032,193...28,042,459 		JBrowse link
G Nabp2 nucleic acid binding protein 2 enables ISO (PMID:25589350) BHF-UCL PMID:25589350 NCBI chrNW_004955458:3,835,205...3,836,841
Ensembl chrNW_004955458:3,835,205...3,840,634 		JBrowse link
G Pot1 protection of telomeres 1 enables ISO (PMID:17237768), (PMID:21852327), (PMID:22763445) BHF-UCL PMID:17237768 PMID:21852327 PMID:22763445 NCBI chrNW_004955479:6,140,599...6,230,512
Ensembl chrNW_004955479:6,140,501...6,209,031 		JBrowse link
G Rpa1 replication protein A1 enables ISO (PMID:16973897), (PMID:24747047)
(PMID:26041456)		 BHF-UCL PMID:16973897 PMID:24747047 PMID:26041456 NCBI chrNW_004955481:1,304,035...1,361,806 JBrowse link
G Rpa2 replication protein A2 enables ISO (PMID:24747047) BHF-UCL PMID:24747047 NCBI chrNW_004955452:7,080,641...7,098,009
Ensembl chrNW_004955452:7,080,579...7,097,742 		JBrowse link
G Terf1 telomeric repeat binding factor 1 enables ISO (PMID:17694070) BHF-UCL PMID:17694070 NCBI chrNW_004955444:7,103,282...7,149,450
Ensembl chrNW_004955444:7,103,552...7,150,323 		JBrowse link
G Terf2 telomeric repeat binding factor 2 enables ISO (PMID:17694070) BHF-UCL PMID:17694070 NCBI chrNW_004955484:7,318,813...7,344,221
Ensembl chrNW_004955484:7,318,860...7,347,430 		JBrowse link
sequence-specific single stranded DNA binding term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Hsf1 heat shock transcription factor 1 ISO RGD PMID:21512157 RGD:10402944 NCBI chrNW_004955454:2,907,265...2,932,352
Ensembl chrNW_004955454:2,907,265...2,932,351 		JBrowse link
G Pcbp1 poly(rC) binding protein 1 enables ISO (PMID:15836633) MGI PMID:15836633 NCBI chrNW_004955424:15,045,642...15,047,184
Ensembl chrNW_004955424:15,046,011...15,047,081 		JBrowse link
single-stranded telomeric DNA binding term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Hnrnpa2b1 heterogeneous nuclear ribonucleoprotein A2/B1 enables ISO (PMID:15659580) HGNC-UCL
UniProt		 PMID:15659580 RGD:10680046 NCBI chrNW_004955410:28,032,193...28,042,459
Ensembl chrNW_004955410:28,032,193...28,042,459 		JBrowse link
G Pot1 protection of telomeres 1 enables ISO (PMID:12768206)
(PMID:17053789)
(PMID:15632080), (PMID:17237767)		 UniProt
MGI
BHF-UCL		 PMID:12768206 PMID:15632080 PMID:17053789 PMID:17237767 NCBI chrNW_004955479:6,140,599...6,230,512
Ensembl chrNW_004955479:6,140,501...6,209,031 		JBrowse link
G Stn1 STN1 subunit of CST complex enables ISO (PMID:19648609) UniProt PMID:19648609 NCBI chrNW_004955485:6,748,682...6,784,119
Ensembl chrNW_004955485:6,748,234...6,784,762 		JBrowse link
Term paths to the root
Path 1
Term Annotations click to browse term
  molecular_function 14366
    binding 13653
      organic cyclic compound binding 2585
        nucleic acid binding 1888
          DNA binding 1360
            single-stranded DNA binding 100
              C-rich single-stranded DNA binding 3
              DNA/DNA annealing activity + 10
              G-rich single-stranded DNA binding 2
              sequence-specific single stranded DNA binding + 12
paths to the root