Send us a Message
Submit Data |  Help |  Video Tutorials |  News |  Publications |  Download |  REST API |  Citing RGD |  Contact   
Search RGD Grant Resources Citing RGD About Us Contact Us
Genes Variants Community Projects QTLs Strains Markers Genome Information Ontologies Cell Lines References Download Submit Data
OntoMate (Literature Search) JBrowse (Genome Browser) Synteny Browser (VCMap) Variant Visualizer Multi-Ontology Enrichment (MOET) Gene-Ortholog Location Finder (GOLF) InterViewer (Protein-Protein Interactions) PhenoMiner (Quatitative Phenotypes) Gene Annotator OLGA (Gene List Generator) AllianceMine GViewer (Genome Viewer)
Aging & Age-Related Disease Cancer & Neoplastic Disease Cardiovascular Disease Coronavirus Disease Developmental Disease Diabetes Hematologic Disease Immune & Inflammatory Disease Infectious Disease Liver Disease Neurological Disease Obesity & Metabolic Syndrome Renal Disease Respiratory Disease Sensory Organ Disease
Find Models Genetic Models Autism Models Rat PhenoMiner (Quantitative Phenotypes) Chinchilla PhenoMiner Expected Ranges (Quantitative Phenotype) PhenoMiner Term Comparison Hybrid Rat Diversity Panel Phenotypes Phenotypes in Other Animal Models Animal Husbandry Strain Medical Records Phylogenetics Strain Availability Calendar Rats 101 Submissions Photo Archive
Pathways
Rat Community Forum Directory of Rat Laboratories Video Tutorials News RGD Publications RGD Presentations Archive Nomenclature Guidelines Resource Links Laboratory Resources Employment Resources
Advanced Search (OLGA)

ONTOLOGY REPORT - ANNOTATIONS

Term:double-stranded DNA binding
go back to main search page
Accession:GO:0003690 term browser browse the term
Definition:Binding to double-stranded DNA.
Synonyms:exact_synonym: dsDNA binding


show annotations for term's descendants           Sort by:
double-stranded DNA binding term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Aff3 ALF transcription elongation factor 3 enables ISO (PMID:25162227) RGD PMID:25162227 NCBI chr 9:40,399,099...40,856,716
Ensembl chr 9:40,404,375...40,857,247 		JBrowse link
G Aim2 absent in melanoma 2 enables ISO
IBA		 (PMID:19158675), (PMID:26197926), (PMID:26583071), (PMID:29440442), (PMID:33980849)
(PMID:19158679), (PMID:23567559), (PMID:27846608), (PMID:32350463)
GO_REF:0000033		 RGD
GO_Central		 PMID:19158675 PMID:19158679 PMID:23567559 PMID:26197926 PMID:26583071 More... GO_REF:0000033 NCBI chr13:85,865,206...85,906,996
Ensembl chr13:85,866,284...85,906,975 		JBrowse link
G Akap8 A-kinase anchoring protein 8 IDA RGD PMID:8125992 RGD:724798 NCBI chr 7:11,316,224...11,332,523
Ensembl chr 7:11,316,228...11,332,399 		JBrowse link
G Aptx aprataxin enables ISO
IEA		 (PMID:16547001), (PMID:17276982)
GO_REF:0000107		 RGD
Ensembl		 PMID:16547001 PMID:17276982 GO_REF:0000107 NCBI chr 5:55,798,896...55,822,963
Ensembl chr 5:55,800,248...55,822,855 		JBrowse link
G Ascl1 achaete-scute family bHLH transcription factor 1 IDA RGD PMID:9521744 RGD:2314148 NCBI chr 7:21,903,136...21,906,003
Ensembl chr 7:21,903,126...21,905,993 		JBrowse link
G Banf1 barrier to autointegration nuclear assembly factor 1 enables ISO (PMID:28841419), (PMID:32792394) RGD PMID:28841419 PMID:32792394 NCBI chr 1:202,672,170...202,674,215
Ensembl chr 1:202,671,305...202,674,188 		JBrowse link
G C1h19orf33 similar to human chromosome 19 open reading frame 33 NOT|enables ISO (PMID:11080599) RGD PMID:11080599 NCBI chr 1:84,549,830...84,550,666
Ensembl chr 1:84,549,831...84,550,664 		JBrowse link
G Camta1 calmodulin binding transcription activator 1 enables IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr 5:161,510,283...162,356,902
Ensembl chr 5:161,510,283...162,356,723 		JBrowse link
G Camta2 calmodulin binding transcription activator 2 enables IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr10:55,383,450...55,401,838
Ensembl chr10:55,383,450...55,401,558 		JBrowse link
G Cdx2 caudal type homeo box 2 IDA RGD PMID:12223343 RGD:625733 NCBI chr12:7,726,798...7,733,142
Ensembl chr12:7,726,798...7,733,142 		JBrowse link
G Cebpg CCAAT/enhancer binding protein gamma IDA RGD PMID:1377818 RGD:69946 NCBI chr 1:87,683,060...87,692,772
Ensembl chr 1:87,684,019...87,694,569 		JBrowse link
G Cenps centromere protein S contributes_to ISO (PMID:20347428) RGD PMID:20347428 NCBI chr 5:159,563,917...159,573,534 JBrowse link
G Cenpx centromere protein X contributes_to ISO (PMID:20347428) RGD PMID:20347428 NCBI chr10:105,991,469...105,994,310 JBrowse link
G Cgas cyclic GMP-AMP synthase enables ISO
IBA		 (PMID:24077100), (PMID:28363908), (PMID:29937271), (PMID:30007416), (PMID:32792394), (PMID:32817552), (PMID:32911482), (PMID:32912999), (PMID:33051594), (PMID:33542149), (PMID:35438208), (PMID:35460603)
(PMID:24077100), (PMID:28214358), (PMID:28363908), (PMID:30007416), (PMID:32911480), (PMID:32911481), (PMID:32913000)
GO_REF:0000033		 RGD
GO_Central		 PMID:24077100 PMID:28214358 PMID:28363908 PMID:29937271 PMID:30007416 More... GO_REF:0000033 NCBI chr 8:79,292,282...79,306,998
Ensembl chr 8:79,294,511...79,305,496 		JBrowse link
G Cggbp1 CGG triplet repeat binding protein 1 enables ISO (PMID:31547883) RGD PMID:31547883 NCBI chr11:2,565,629...2,572,869
Ensembl chr11:2,565,484...2,573,031 		JBrowse link
G Creb1 cAMP responsive element binding protein 1 IDA RGD PMID:12697699 RGD:1624302 NCBI chr 9:65,903,511...65,972,562
Ensembl chr 9:65,903,547...65,970,816 		JBrowse link
G Cry1 cryptochrome circadian regulator 1 enables ISO (PMID:9801304) RGD PMID:9801304 NCBI chr 7:18,529,823...18,594,092
Ensembl chr 7:18,529,823...18,594,091 		JBrowse link
G Ddx11 DEAD/H-box helicase 11 enables ISO (PMID:9013641) RGD PMID:9013641 NCBI chr 9:105,833,234...105,862,844
Ensembl chr 9:105,833,504...105,862,550 		JBrowse link
G Ddx60 DEXD/H-box helicase 60 enables ISO (PMID:21791617) RGD PMID:21791617 NCBI chr16:28,077,000...28,197,903
Ensembl chr16:28,076,999...28,179,526 		JBrowse link
G Defb1 defensin beta 1 ISO RGD (All species) (All species) NCBI chr16:70,298,862...70,313,604
Ensembl chr16:70,298,863...70,313,604 		JBrowse link
G Dhx9 DExH-box helicase 9 enables ISO (PMID:12711669), (PMID:9111062) RGD PMID:9111062 PMID:12711669 NCBI chr13:65,602,322...65,639,098
Ensembl chr13:65,602,323...65,639,069 		JBrowse link
G Dmc1 DNA meiotic recombinase 1 enables IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr 7:111,124,888...111,167,465
Ensembl chr 7:111,124,888...111,167,952 		JBrowse link
G Egr1 early growth response 1 IDA RGD PMID:10837920 RGD:1626488 NCBI chr18:26,462,967...26,466,766
Ensembl chr18:26,462,981...26,466,766 		JBrowse link
G Elk1 ETS transcription factor ELK1 IDA RGD PMID:11557580 RGD:628487 NCBI chr  X:1,138,826...1,155,713
Ensembl chr  X:1,139,756...1,155,713 		JBrowse link
G Eloa elongin A TAS RGD PMID:8244996 RGD:730012 NCBI chr 5:148,231,600...148,246,760
Ensembl chr 5:148,231,596...148,246,765 		JBrowse link
G Ercc5 ERCC excision repair 5, endonuclease enables ISO (PMID:12644470), (PMID:8090225) RGD PMID:8090225 PMID:12644470 NCBI chr 9:46,309,477...46,354,478
Ensembl chr 9:46,309,389...46,354,472 		JBrowse link
G Fbh1 F-box DNA helicase 1 enables ISO (PMID:23393192) RGD PMID:23393192 NCBI chr17:66,749,506...66,787,590
Ensembl chr17:66,749,534...66,787,590 		JBrowse link
G Fev FEV transcription factor, ETS family member IDA RGD PMID:9468386 RGD:633697 NCBI chr 9:76,439,164...76,443,603
Ensembl chr 9:76,439,172...76,443,065 		JBrowse link
G Fos Fos proto-oncogene, AP-1 transcription factor subunit IDA RGD PMID:2105492 PMID:10830307 RGD:1298921, RGD:1626699 NCBI chr 6:105,121,170...105,124,036
Ensembl chr 6:105,121,170...105,124,036 		JBrowse link
G Fosb FosB proto-oncogene, AP-1 transcription factor subunit IDA RGD PMID:10830307 RGD:1626699 NCBI chr 1:78,954,312...78,961,492
Ensembl chr 1:78,954,115...78,961,465 		JBrowse link
G Fosl2 FOS like 2, AP-1 transcription factor subunit IDA RGD PMID:10830307 RGD:1626699 NCBI chr 6:24,297,898...24,319,219
Ensembl chr 6:24,300,956...24,320,034 		JBrowse link
G Foxa1 forkhead box A1 IDA RGD PMID:10024498 RGD:1627570 NCBI chr 6:75,099,907...75,136,534
Ensembl chr 6:75,103,503...75,136,188 		JBrowse link
G Foxa2 forkhead box A2 enables IDA
ISO		 MGI:1890508 (PMID:23117660) RGD PMID:23117660 PMID:17408383 PMID:10024498 RGD:1626707, RGD:1627570 NCBI chr 3:135,470,123...135,474,326
Ensembl chr 3:135,470,131...135,474,326 		JBrowse link
G Foxd3 forkhead box D3 IMP RGD PMID:7683413 RGD:632667 NCBI chr 5:114,335,084...114,337,450
Ensembl chr 5:114,335,408...114,336,817 		JBrowse link
G Gata6 GATA binding protein 6 IDA RGD PMID:10851229 RGD:2314198 NCBI chr18:2,188,121...2,219,532
Ensembl chr18:2,188,121...2,219,532 		JBrowse link
G H1f0 H1.0 linker histone enables IBA
ISO		 GO_REF:0000033
(PMID:16006555)		 GO_Central
RGD		 PMID:16006555 GO_REF:0000033 NCBI chr 7:110,592,834...110,594,694
Ensembl chr 7:110,592,208...110,594,694 		JBrowse link
G H1f1 H1.1 linker histone, cluster member enables IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr17:41,366,268...41,367,011
Ensembl chr17:41,366,268...41,367,011 		JBrowse link
G H1f10 H1.10 linker histone enables IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr 4:120,440,515...120,441,578
Ensembl chr 4:120,440,870...120,441,448 		JBrowse link
G H1f2 H1.2 linker histone, cluster member enables IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr17:41,391,106...41,392,597
Ensembl chr17:41,388,477...41,392,635 		JBrowse link
G H1f4 H1.4 linker histone, cluster member enables IDA
IBA		 PMID:9109385
GO_REF:0000033		 GO_Central PMID:9109385 GO_REF:0000033, RGD:12793017 NCBI chr17:41,486,574...41,487,355
Ensembl chr17:41,486,560...41,487,403 		JBrowse link
G H1f5 H1.5 linker histone, cluster member enables IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr17:42,726,132...42,727,162
Ensembl chr17:42,726,127...42,769,160 		JBrowse link
G H1f6 H1.6 linker histone, cluster member enables IBA
ISO		 GO_REF:0000033
(PMID:16006555)		 GO_Central
RGD		 PMID:16006555 GO_REF:0000033 NCBI chr17:41,427,365...41,428,109
Ensembl chr17:41,427,323...41,428,119 		JBrowse link
G H1f7 H1.7 linker histone enables IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr 7:129,408,521...129,409,888
Ensembl chr 7:129,408,359...129,409,930 		JBrowse link
G H1f8 H1.8 linker histone enables IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr 4:148,993,133...148,998,254
Ensembl chr 4:148,993,133...148,998,254 		JBrowse link
G H4f3 H1.3 linker histone, cluster member enables IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr17:41,551,524...41,552,303
Ensembl chr17:41,529,667...41,552,334 		JBrowse link
G Hes2 hes family bHLH transcription factor 2 IDA RGD PMID:8354270 RGD:61626 NCBI chr 5:162,667,190...162,668,235
Ensembl chr 5:162,667,190...162,668,235 		JBrowse link
G Hes5 hes family bHLH transcription factor 5 IDA RGD PMID:1400497 RGD:728403 NCBI chr 5:165,522,138...165,523,684
Ensembl chr 5:165,522,234...165,523,001 		JBrowse link
G Hils1 histone linker H1 domain, spermatid-specific 1 enables IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr10:79,913,525...79,914,321
Ensembl chr10:79,913,480...79,914,321 		JBrowse link
G Hmgb1 high mobility group box 1 enables IDA
ISO		 (PMID:19890330) RGD PMID:19890330 PMID:11024186 RGD:2316830 NCBI chr12:5,972,950...5,979,658
Ensembl chr12:5,901,586...5,978,565
Ensembl chr16:5,901,586...5,978,565 		JBrowse link
G Hmgb2 high mobility group box 2 enables TAS
ISO
ISS		 (PMID:19890330)
GO_REF:0000024
(PMID:11275566), (PMID:11754747)		 RGD
AgBase		 PMID:11275566 PMID:11754747 PMID:19890330 PMID:11279268 GO_REF:0000024, RGD:734534 NCBI chr16:32,710,651...32,713,230
Ensembl chr16:32,710,658...32,713,140 		JBrowse link
G Hmgb2l1 high mobility group box 2-like 1 enables ISS GO_REF:0000024 AgBase GO_REF:0000024 NCBI chr11:47,252,583...47,253,646
Ensembl chr11:47,252,569...47,253,669 		JBrowse link
G Hmgb2l2 high mobility group box 2 like 2 enables ISS GO_REF:0000024 AgBase GO_REF:0000024 NCBI chr14:69,045,590...69,046,623
Ensembl chr14:69,045,641...69,046,640 		JBrowse link
G Hnf1a HNF1 homeobox A IDA RGD PMID:14561216 RGD:1599297 NCBI chr12:41,638,536...41,672,806
Ensembl chr12:41,645,587...41,672,104 		JBrowse link
G Hnrnpdl heterogeneous nuclear ribonucleoprotein D-like enables ISO (PMID:9538234) RGD PMID:9538234 NCBI chr14:9,557,430...9,563,659
Ensembl chr14:9,557,425...9,562,506 		JBrowse link
G Hnrnpk heterogeneous nuclear ribonucleoprotein K IDA RGD PMID:16519889 RGD:10401105 NCBI chr17:6,262,936...6,275,001
Ensembl chr17:6,262,998...6,274,997 		JBrowse link
G Hnrnpu heterogeneous nuclear ribonucleoprotein U enables ISO (PMID:8068679), (PMID:8174554) RGD PMID:8068679 PMID:8174554 NCBI chr13:90,069,058...90,086,905
Ensembl chr13:90,074,181...90,086,588 		JBrowse link
G Jdp2 Jun dimerization protein 2 IDA RGD PMID:9154808 RGD:633162 NCBI chr 6:105,261,619...105,302,386
Ensembl chr 6:105,261,373...105,301,485 		JBrowse link
G Jun Jun proto-oncogene, AP-1 transcription factor subunit IDA RGD PMID:14512277 PMID:10830307 PMID:10837920 RGD:1549442, RGD:1626699, RGD:1626488 NCBI chr 5:109,894,175...109,897,268
Ensembl chr 5:109,893,145...109,897,656 		JBrowse link
G Junb JunB proto-oncogene, AP-1 transcription factor subunit IDA RGD PMID:10837920 PMID:10830307 RGD:1626488, RGD:1626699 NCBI chr19:23,176,265...23,178,049
Ensembl chr19:23,176,294...23,178,035 		JBrowse link
G Jund JunD proto-oncogene, AP-1 transcription factor subunit IDA RGD PMID:10837920 PMID:10830307 RGD:1626488, RGD:1626699 NCBI chr16:18,734,121...18,735,799
Ensembl chr16:18,734,122...18,735,799 		JBrowse link
G Kin Kin17 DNA and RNA binding protein enables IBA
ISO		 GO_REF:0000033
(PMID:1923796)		 GO_Central
RGD		 PMID:1923796 GO_REF:0000033 NCBI chr17:68,413,483...68,431,392
Ensembl chr17:68,413,486...68,423,845 		JBrowse link
G Klf4 KLF transcription factor 4 IDA RGD PMID:12034813 RGD:619591 NCBI chr 5:70,278,843...70,283,751
Ensembl chr 5:70,278,972...70,283,602 		JBrowse link
G Klf6 KLF transcription factor 6 IDA RGD PMID:9689109 RGD:62381 NCBI chr17:64,539,456...64,548,451
Ensembl chr17:64,531,463...64,588,570 		JBrowse link
G Lmnb1 lamin B1 enables ISO (PMID:29484800) RGD PMID:29484800 NCBI chr18:50,175,861...50,215,210
Ensembl chr18:50,175,874...50,214,502 		JBrowse link
G LOC257642 rRNA promoter binding protein IDA RGD PMID:11713263 RGD:1299600
G Lsm14a LSM14A mRNA processing body assembly factor enables ISO (PMID:22745163) RGD PMID:22745163 NCBI chr 1:86,964,800...87,009,325
Ensembl chr 1:86,964,828...87,009,276 		JBrowse link
G Maf MAF bZIP transcription factor IDA RGD PMID:9571165 RGD:1547884 NCBI chr19:43,353,867...43,713,162
Ensembl chr19:43,360,342...43,712,365 		JBrowse link
G Mapk1 mitogen activated protein kinase 1 IDA RGD PMID:26950759 RGD:13800883 NCBI chr11:83,957,813...84,023,629
Ensembl chr11:83,957,813...84,023,616 		JBrowse link
G Mau2 MAU2 sister chromatid cohesion factor enables IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr16:19,383,847...19,414,996
Ensembl chr16:19,383,492...19,408,727 		JBrowse link
G Men1 menin 1 enables ISO (PMID:15331604) RGD PMID:15331604 NCBI chr 1:203,638,905...203,644,871
Ensembl chr 1:203,639,000...203,644,871 		JBrowse link
G Mnd1 meiotic nuclear divisions 1 enables IEA GO_REF:0000002 InterPro GO_REF:0000002 NCBI chr 2:169,433,523...169,496,081
Ensembl chr 2:169,433,540...169,496,096 		JBrowse link
G Mnda myeloid cell nuclear differentiation antigen enables IBA
ISO		 GO_REF:0000033
(PMID:19158679)		 GO_Central
RGD		 PMID:19158679 GO_REF:0000033 NCBI chr13:86,017,888...86,035,556
Ensembl chr13:86,017,892...86,034,201 		JBrowse link
G Msh2 mutS homolog 2 contributes_to ISO (PMID:11809883) RGD PMID:11809883 NCBI chr 6:6,813,793...6,872,960
Ensembl chr 6:6,813,795...6,872,938 		JBrowse link
G Msh4 mutS homolog 4 enables IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr 2:242,785,392...242,844,609
Ensembl chr 2:242,792,661...242,843,487 		JBrowse link
G Msh5 mutS homolog 5 enables IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr20:3,773,867...3,793,337
Ensembl chr20:3,776,942...3,793,336 		JBrowse link
G Msh6 mutS homolog 6 contributes_to ISO (PMID:11809883) RGD PMID:11809883 NCBI chr 6:6,562,631...6,579,995
Ensembl chr 6:6,562,632...6,579,956 		JBrowse link
G Mterf1 mitochondrial transcription termination factor 1 enables ISO
ISS
IEA		 (PMID:20550934)
GO_REF:0000024
GO_REF:0000002		 RGD
UniProt
InterPro		 PMID:20550934 GO_REF:0000002 GO_REF:0000024 NCBI chr 4:30,226,345...30,233,402
Ensembl chr 4:30,226,343...30,233,584 		JBrowse link
G Mterf2 mitochondrial transcription termination factor 2 enables IEA GO_REF:0000002 InterPro GO_REF:0000002 NCBI chr 7:18,598,202...18,608,278
Ensembl chr 7:18,598,103...18,620,684 		JBrowse link
G Mterf4 mitochondrial transcription termination factor 4 enables IEA GO_REF:0000002 InterPro GO_REF:0000002 NCBI chr 9:93,834,162...93,838,838
Ensembl chr 9:93,834,144...93,838,864 		JBrowse link
G Myc MYC proto-oncogene, bHLH transcription factor IDA RGD PMID:15139290 RGD:1601462 NCBI chr 7:93,593,705...93,598,633
Ensembl chr 7:93,593,705...93,598,630 		JBrowse link
G Neil3 nei-like DNA glycosylase 3 enables ISO (PMID:20185759) RGD PMID:20185759 NCBI chr16:38,359,305...38,418,528
Ensembl chr16:38,359,371...38,418,527 		JBrowse link
G Neurod1 neuronal differentiation 1 IDA RGD PMID:10101232 RGD:727267 NCBI chr 3:64,359,554...64,363,526
Ensembl chr 3:64,359,395...64,363,649 		JBrowse link
G Neurog3 neurogenin 3 IDA RGD PMID:9130143 RGD:633362 NCBI chr20:30,079,780...30,081,262
Ensembl chr20:30,079,780...30,081,262 		JBrowse link
G Nfib nuclear factor I/B IDA RGD PMID:10521600 RGD:633408 NCBI chr 5:96,759,208...96,974,001
Ensembl chr 5:96,764,653...96,975,479 		JBrowse link
G Nfic nuclear factor I/C IDA RGD PMID:10521600 RGD:633408 NCBI chr 7:8,278,210...8,309,936
Ensembl chr 7:8,253,361...8,309,936 		JBrowse link
G Nfkb1 nuclear factor kappa B subunit 1 IDA RGD PMID:14576180 PMID:9718198 RGD:1358515, RGD:10045657 NCBI chr 2:224,016,214...224,132,135
Ensembl chr 2:224,016,214...224,110,404 		JBrowse link
G Nkx2-8 NK2 homeobox 8 enables ISO (PMID:9446603) RGD PMID:9446603 NCBI chr 6:74,086,274...74,087,977
Ensembl chr 6:74,086,274...74,087,977 		JBrowse link
G Nlrp1a NLR family, pyrin domain containing 1A enables ISO (PMID:33243852) RGD PMID:33243852 NCBI chr10:55,778,560...55,833,639
Ensembl chr10:55,778,560...55,825,180 		JBrowse link
G Nr0b1 nuclear receptor subfamily 0, group B, member 1 IMP RGD PMID:12697699 RGD:1624302 NCBI chr  X:50,756,886...50,761,014
Ensembl chr  X:50,756,886...50,761,011 		JBrowse link
G Nr1h4 nuclear receptor subfamily 1, group H, member 4 contributes_to IDA RGD PMID:15047603 RGD:1625080 NCBI chr 7:23,846,122...23,942,085
Ensembl chr 7:23,846,122...23,942,047 		JBrowse link
G Nr3c1 nuclear receptor subfamily 3, group C, member 1 IDA RGD PMID:8618925 RGD:1601060 NCBI chr18:31,271,681...31,393,320
Ensembl chr18:31,271,681...31,393,375 		JBrowse link
G Nr3c2 nuclear receptor subfamily 3, group C, member 2 IDA RGD PMID:8618925 RGD:1601060 NCBI chr19:30,715,634...31,059,885
Ensembl chr19:30,715,648...31,059,885 		JBrowse link
G Nr4a1 nuclear receptor subfamily 4, group A, member 1 enables ISS
ISO		 GO_REF:0000024
(PMID:37001519)		 UniProt
RGD		 PMID:37001519 GO_REF:0000024 NCBI chr 7:132,368,399...132,389,300
Ensembl chr 7:132,374,840...132,389,297 		JBrowse link
G Nr5a1 nuclear receptor subfamily 5, group A, member 1 IDA RGD PMID:12697699 RGD:1624302 NCBI chr 3:22,464,786...22,486,328
Ensembl chr 3:22,465,502...22,486,328 		JBrowse link
G Nr5a2 nuclear receptor subfamily 5, group A, member 2 IDA RGD PMID:8668203 RGD:68248 NCBI chr13:48,313,634...48,433,494
Ensembl chr13:48,316,301...48,433,326 		JBrowse link
G Nthl1 nth-like DNA glycosylase 1 enables ISO (PMID:15358233) RGD PMID:15358233 NCBI chr10:13,655,791...13,661,958
Ensembl chr10:13,655,785...13,661,957 		JBrowse link
G Nucks1 nuclear casein kinase and cyclin-dependent kinase substrate 1 enables TAS
IBA
NAS
ISO		 GO_REF:0000033
PMID:1627131
(PMID:26323318)		 GO_Central
RGD		 PMID:26323318 PMID:12413487 PMID:1627131 GO_REF:0000033, RGD:1298022, RGD:11344951 NCBI chr13:43,345,091...43,374,316
Ensembl chr13:43,345,115...43,370,229 		JBrowse link
G Nup153 nucleoporin 153 IDA RGD PMID:8422679 RGD:729043 NCBI chr17:17,972,217...18,024,876
Ensembl chr17:17,972,217...18,024,876 		JBrowse link
G Park7 Parkinsonism associated deglycase NOT|enables ISO (PMID:22683601) RGD PMID:22683601 NCBI chr 5:161,353,718...161,376,993
Ensembl chr 5:161,353,719...161,376,970 		JBrowse link
G Pax4 paired box 4 IDA RGD PMID:10601637 RGD:729527 NCBI chr 4:57,058,453...57,065,995
Ensembl chr 4:57,058,462...57,063,408 		JBrowse link
G Pax6 paired box 6 IDA RGD PMID:12370174 RGD:632189 NCBI chr 3:92,128,772...92,157,022
Ensembl chr 3:92,135,637...92,157,014 		JBrowse link
G Pcid2 PCI domain containing 2 enables IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr16:76,423,245...76,448,712
Ensembl chr16:76,423,245...76,448,712 		JBrowse link
G Pin4 peptidylprolyl cis/trans isomerase, NIMA-interacting 4 enables ISO (PMID:17875217) RGD PMID:17875217 NCBI chr  X:67,232,066...67,238,709
Ensembl chr  X:67,232,081...67,238,702 		JBrowse link
G Pnkp polynucleotide kinase 3'-phosphatase enables IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr 1:95,341,465...95,346,921
Ensembl chr 1:95,341,620...95,346,920 		JBrowse link
G Pola1 DNA polymerase alpha 1, catalytic subunit IDA RGD PMID:7670930 RGD:1580605 NCBI chr  X:58,034,617...58,348,612
Ensembl chr  X:58,034,619...58,348,536 		JBrowse link
G Polg2 DNA polymerase gamma 2, accessory subunit enables ISO (PMID:10608893), (PMID:26123486) RGD PMID:10608893 PMID:26123486 NCBI chr10:91,712,586...91,723,008
Ensembl chr10:91,712,586...91,723,008 		JBrowse link
G Polr3f RNA polymerase III subunit F enables ISO (PMID:21358628) RGD PMID:21358628 NCBI chr 3:131,908,466...131,924,838
Ensembl chr 3:131,908,466...131,924,837 		JBrowse link
G Pou3f4 POU class 3 homeobox 4 IDA RGD PMID:9372951 RGD:1599157 NCBI chr  X:75,858,646...75,859,923
Ensembl chr  X:75,858,646...75,859,923 		JBrowse link
G Pparg peroxisome proliferator-activated receptor gamma enables ISO UniProtKB:P19793 (PMID:19043829) RGD PMID:19043829 NCBI chr 4:148,423,102...148,548,471
Ensembl chr 4:148,423,194...148,548,468 		JBrowse link
G Pqbp1 polyglutamine binding protein 1 enables ISS
ISO		 GO_REF:0000024
(PMID:26046437)		 UniProt
RGD		 PMID:26046437 GO_REF:0000024 NCBI chr  X:14,603,516...14,608,091
Ensembl chr  X:14,603,539...14,608,087 		JBrowse link
G Prkdc protein kinase, DNA-activated, catalytic subunit enables ISO (PMID:22504299)
(PMID:20150414)		 RGD PMID:20150414 PMID:22504299 NCBI chr11:85,040,790...85,258,357
Ensembl chr11:85,040,792...85,257,952 		JBrowse link
G Psmc3ip PSMC3 interacting protein enables IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr10:86,024,281...86,027,928
Ensembl chr10:86,023,950...86,027,423 		JBrowse link
G Pura purine rich element binding protein A enables ISO (PMID:15282343) RGD PMID:15282343 NCBI chr18:27,885,071...27,905,509
Ensembl chr18:27,884,556...27,905,513 		JBrowse link
G Purb purine rich element binding protein B enables ISO (PMID:15282343) RGD PMID:15282343 NCBI chr14:81,342,374...81,344,857
Ensembl chr14:81,336,448...81,351,432 		JBrowse link
G Rad50 RAD50 double strand break repair protein IDA RGD PMID:21956462 RGD:9831191 NCBI chr10:37,809,353...37,861,309
Ensembl chr10:37,808,726...37,861,396 		JBrowse link
G Rad51 RAD51 recombinase enables ISO
IBA		 (PMID:26681308), (PMID:7988572)
GO_REF:0000033		 RGD
GO_Central		 PMID:7988572 PMID:26681308 GO_REF:0000033 NCBI chr 3:106,099,753...106,125,038
Ensembl chr 3:106,100,381...106,125,035 		JBrowse link
G Rad51ap1 RAD51 associated protein 1 enables ISO
IBA		 (PMID:17996711), (PMID:26323318), (PMID:9396801)
GO_REF:0000033		 RGD
GO_Central		 PMID:9396801 PMID:17996711 PMID:26323318 GO_REF:0000033 NCBI chr 4:159,759,454...159,772,473
Ensembl chr 4:159,759,459...159,772,524 		JBrowse link
G Rad51b RAD51 paralog B enables ISO
IBA		 (PMID:12441335)
GO_REF:0000033		 RGD
GO_Central		 PMID:12441335 GO_REF:0000033 NCBI chr 6:98,096,525...98,640,988
Ensembl chr 6:98,098,868...98,640,979 		JBrowse link
G Rbck1 RANBP2-type and C3HC4-type zinc finger containing 1 IDA RGD PMID:9514928 RGD:1299423 NCBI chr 3:140,789,079...140,806,017
Ensembl chr 3:140,789,080...140,806,005 		JBrowse link
G Rela RELA proto-oncogene, NF-kB subunit IDA RGD PMID:15980038 PMID:9585425 RGD:152025214, RGD:5024926 NCBI chr 1:202,925,001...202,935,484
Ensembl chr 1:202,924,945...202,935,484 		JBrowse link
G Rexo4 REX4 homolog, 3'-5' exonuclease enables ISO (PMID:21602889) RGD PMID:21602889 NCBI chr 3:10,280,654...10,291,003
Ensembl chr 3:10,280,654...10,290,996 		JBrowse link
G Rfc1 replication factor C subunit 1 IDA RGD PMID:9826522 RGD:2307113 NCBI chr14:42,966,279...43,041,372
Ensembl chr14:42,966,324...43,041,370 		JBrowse link
G Rig1 RNA sensor RIG-1 enables ISO (PMID:19158679) RGD PMID:19158679 NCBI chr 5:55,321,351...55,369,947
Ensembl chr 5:55,321,235...55,370,819 		JBrowse link
G Rxra retinoid X receptor alpha contributes_to
enables		 IDA
ISO		 UniProtKB:P37231 (PMID:19043829) RGD PMID:19043829 PMID:17483744 RGD:1643106 NCBI chr 3:10,989,832...11,076,366
Ensembl chr 3:10,989,832...11,073,712 		JBrowse link
G Setmar SET domain and mariner transposase fusion gene enables ISO
IBA		 (PMID:24573677)
GO_REF:0000033		 RGD
GO_Central		 PMID:24573677 GO_REF:0000033 NCBI chr 4:141,046,058...141,058,183
Ensembl chr 4:141,046,069...141,058,197 		JBrowse link
G Smad2 SMAD family member 2 enables ISS
ISO		 GO_REF:0000024
(PMID:15282343)		 UniProt
RGD		 PMID:15282343 GO_REF:0000024 NCBI chr18:69,849,884...69,918,926
Ensembl chr18:69,850,377...69,912,323 		JBrowse link
G Smad3 SMAD family member 3 enables ISO (PMID:15282343) RGD PMID:15282343 NCBI chr 8:64,126,829...64,236,960
Ensembl chr 8:64,110,039...64,236,960 		JBrowse link
G Smc3 structural maintenance of chromosomes 3 enables IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr 1:252,601,422...252,644,522
Ensembl chr 1:252,601,753...252,644,522 		JBrowse link
G Sp1 Sp1 transcription factor enables IDA
ISO		 (PMID:15282343)
(PMID:20371611)		 RGD PMID:15282343 PMID:20371611 PMID:10837920 RGD:1626488 NCBI chr 7:133,541,302...133,571,961
Ensembl chr 7:133,541,491...133,571,961 		JBrowse link
G Sp3 Sp3 transcription factor enables ISO (PMID:15282343) RGD PMID:15282343 NCBI chr 3:57,811,855...57,857,150
Ensembl chr 3:57,812,075...57,860,342 		JBrowse link
G Sprtn SprT-like N-terminal domain enables ISO
ISS
IEA		 (PMID:27852435), (PMID:27871365), (PMID:27871366), (PMID:32649882)
GO_REF:0000024
GO_REF:0000107		 RGD
UniProt
Ensembl		 PMID:27852435 PMID:27871365 PMID:27871366 PMID:32649882 GO_REF:0000024 GO_REF:0000107 NCBI chr19:52,857,612...52,864,864
Ensembl chr19:52,857,866...52,864,864 		JBrowse link
G Stat1 signal transducer and activator of transcription 1 enables ISO (PMID:9630226) RGD PMID:9630226 NCBI chr 9:49,419,561...49,459,969
Ensembl chr 9:49,419,340...49,588,540 		JBrowse link
G Stat5a signal transducer and activator of transcription 5A IDA RGD PMID:8584036 PMID:11064147 RGD:730121, RGD:1624963 NCBI chr10:85,785,537...85,809,869
Ensembl chr10:85,785,537...85,809,866 		JBrowse link
G Stat5b signal transducer and activator of transcription 5B IDA RGD PMID:11064147 RGD:1624963 NCBI chr10:85,704,841...85,775,856
Ensembl chr10:85,705,670...85,775,668 		JBrowse link
G Sub1 SUB1 regulator of transcription enables ISO (PMID:16605275) RGD PMID:16605275 NCBI chr 2:61,005,646...61,020,486
Ensembl chr 2:61,005,666...61,020,436
Ensembl chr 2:61,005,666...61,020,436 		JBrowse link
G Sycp1 synaptonemal complex protein 1 enables ISS
IBA
ISO
IEA		 GO_REF:0000024
GO_REF:0000033
(PMID:29915389)
GO_REF:0000107		 UniProt
GO_Central
RGD
Ensembl		 PMID:29915389 GO_REF:0000024 GO_REF:0000033 GO_REF:0000107 NCBI chr 2:190,296,688...190,456,687
Ensembl chr 2:190,296,954...190,456,737 		JBrowse link
G Tardbp TAR DNA binding protein enables ISO (PMID:7745706) RGD PMID:7745706 NCBI chr 5:159,050,518...159,062,218
Ensembl chr 5:159,051,799...159,062,055 		JBrowse link
G Tcf4 transcription factor 4 IDA RGD PMID:7913462 RGD:68862 NCBI chr18:62,941,739...63,288,126
Ensembl chr18:62,943,782...63,284,425 		JBrowse link
G Tdg thymine-DNA glycosylase enables ISO (PMID:11889051), (PMID:18512959), (PMID:22327402) RGD PMID:11889051 PMID:18512959 PMID:22327402 NCBI chr 7:21,077,853...21,097,617
Ensembl chr 7:21,077,853...21,097,567 		JBrowse link
G Tdp1 tyrosyl-DNA phosphodiesterase 1 enables ISO
IBA
IEA		 (PMID:15811850)
GO_REF:0000033
GO_REF:0000107		 RGD
GO_Central
Ensembl		 PMID:15811850 GO_REF:0000033 GO_REF:0000107 NCBI chr 6:119,163,192...119,231,029
Ensembl chr 6:119,163,166...119,231,021 		JBrowse link
G Tef TEF transcription factor, PAR bZIP family member enables ISO (PMID:1916262) RGD PMID:1916262 NCBI chr 7:113,317,191...113,341,783
Ensembl chr 7:113,317,283...113,341,783 		JBrowse link
G Thrb thyroid hormone receptor beta IDA RGD PMID:15766871 RGD:1601662 NCBI chr15:7,685,180...8,031,920
Ensembl chr15:7,685,180...7,882,916 		JBrowse link
G Top1 DNA topoisomerase I enables ISO (PMID:8631794) RGD PMID:8631794 NCBI chr 3:149,293,469...149,376,618
Ensembl chr 3:149,293,403...149,376,623 		JBrowse link
G Tp63 tumor protein p63 IDA RGD PMID:11850815 RGD:1600401 NCBI chr11:74,838,858...75,049,764
Ensembl chr11:74,838,859...75,049,398 		JBrowse link
G Trex1 three prime repair exonuclease 1 enables ISO (PMID:19158679), (PMID:25848017) RGD PMID:19158679 PMID:25848017 NCBI chr 8:109,706,613...109,707,913
Ensembl chr 8:109,706,613...109,708,796 		JBrowse link
G Usf1 upstream transcription factor 1 IDA RGD PMID:17408383 RGD:1626707 NCBI chr13:83,845,230...83,854,875
Ensembl chr13:83,822,035...83,854,885 		JBrowse link
G Usf2 upstream transcription factor 2, c-fos interacting IDA RGD PMID:17408383 RGD:1626707 NCBI chr 1:86,174,703...86,185,942
Ensembl chr 1:86,174,703...86,185,617 		JBrowse link
G Wdr48 WD repeat domain 48 enables ISO (PMID:27239033) RGD PMID:27239033 NCBI chr 8:119,622,053...119,655,264
Ensembl chr 8:119,622,048...119,655,264 		JBrowse link
G Wt1 WT1 transcription factor enables ISO (PMID:7585606) RGD PMID:7585606 NCBI chr 3:91,566,540...91,613,653
Ensembl chr 3:91,567,001...91,613,643 		JBrowse link
G Xrcc5 X-ray repair cross complementing 5 contributes_to IDA
IBA		 GO_REF:0000033 GO_Central
RGD		 PMID:14576192 GO_REF:0000033, RGD:1300423 NCBI chr 9:73,955,216...74,044,020
Ensembl chr 9:73,955,216...74,044,018 		JBrowse link
G Xrcc6 X-ray repair cross complementing 6 contributes_to
enables		 IDA
ISO
IBA		 (PMID:20150414)
GO_REF:0000033		 RGD
GO_Central		 PMID:20150414 PMID:14576192 GO_REF:0000033, RGD:1300423 NCBI chr 7:113,542,992...113,563,762
Ensembl chr 7:113,543,057...113,563,762 		JBrowse link
G Zbtb16 zinc finger and BTB domain containing 16 IDA RGD PMID:14657020 RGD:1566502 NCBI chr 8:48,989,376...49,177,011
Ensembl chr 8:48,994,566...49,177,011 		JBrowse link
G Zcchc3 zinc finger CCHC-type containing 3 enables ISO
IBA		 (PMID:30135424)
GO_REF:0000033		 RGD
GO_Central		 PMID:30135424 GO_REF:0000033 NCBI chr 3:140,872,460...140,875,292
Ensembl chr 3:140,872,460...140,882,408 		JBrowse link
G Zeb1 zinc finger E-box binding homeobox 1 IDA RGD PMID:8769566 RGD:730026 NCBI chr17:51,948,948...52,116,018
Ensembl chr17:51,948,948...52,115,214 		JBrowse link
G Zfp148 zinc finger protein 148 IDA RGD PMID:8943318 RGD:61784 NCBI chr11:67,276,455...67,385,803
Ensembl chr11:67,281,707...67,385,772 		JBrowse link
G Zfp386 zinc finger protein 386 (Kruppel-like) IMP RGD PMID:9655926 RGD:633130 NCBI chr 6:136,966,547...136,984,013
Ensembl chr 6:136,966,586...136,983,441 		JBrowse link
G Zmpste24 zinc metallopeptidase STE24 enables ISO MGI:1347476 (PMID:23117660) RGD PMID:23117660 NCBI chr 5:134,627,218...134,660,360
Ensembl chr 5:134,627,229...134,660,110 		JBrowse link
G Zmynd11 zinc finger, MYND-type containing 11 enables ISO (PMID:24675531) RGD PMID:24675531 NCBI chr17:60,542,669...60,631,913
Ensembl chr17:60,543,077...60,631,902 		JBrowse link
adenine/guanine mispair binding term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Mutyh mutY DNA glycosylase enables IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr 5:130,274,034...130,286,149
Ensembl chr 5:130,274,122...130,286,146 		JBrowse link
cAMP response element binding term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Atf2 activating transcription factor 2 enables IDA
ISO
IBA
IEA		 (PMID:11231009)
GO_REF:0000033
GO_REF:0000107
(PMID:19861239), (PMID:23729669)		 RGD
GO_Central
Ensembl		 PMID:11231009 PMID:19861239 PMID:23729669 PMID:12196528 GO_REF:0000033 GO_REF:0000107, RGD:727574 NCBI chr 3:58,718,323...58,795,280
Ensembl chr 3:58,718,332...58,795,236 		JBrowse link
G Atf7 activating transcription factor 7 enables IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr 7:133,660,491...133,750,902
Ensembl chr 7:133,663,294...133,750,848 		JBrowse link
G Creb1 cAMP responsive element binding protein 1 enables ISO
IBA		 (PMID:19861239)
(PMID:23729669)
GO_REF:0000033		 RGD
GO_Central		 PMID:19861239 PMID:23729669 GO_REF:0000033 NCBI chr 9:65,903,511...65,972,562
Ensembl chr 9:65,903,547...65,970,816 		JBrowse link
G Creb3l1 cAMP responsive element binding protein 3-like 1 enables ISS
ISO
IBA		 GO_REF:0000024
(PMID:19767743)
GO_REF:0000033		 UniProt
RGD
GO_Central		 PMID:19767743 GO_REF:0000024 GO_REF:0000033 NCBI chr 3:77,952,589...77,993,513
Ensembl chr 3:77,952,540...77,993,456 		JBrowse link
G Creb3l2 cAMP responsive element binding protein 3-like 2 enables ISO
IBA
IEA		 (PMID:17178827)
(PMID:19767744)
GO_REF:0000033
GO_REF:0000107		 RGD
GO_Central
Ensembl		 PMID:17178827 PMID:19767744 GO_REF:0000033 GO_REF:0000107 NCBI chr 4:65,907,570...66,112,078
Ensembl chr 4:65,907,655...66,023,763 		JBrowse link
G Creb5 cAMP responsive element binding protein 5 enables IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr 4:82,393,091...82,794,320
Ensembl chr 4:82,393,730...82,790,325 		JBrowse link
G E4f1 E4F transcription factor 1 enables ISO (PMID:14645522) RGD PMID:14645522 NCBI chr10:13,471,478...13,495,018
Ensembl chr10:13,474,456...13,485,974 		JBrowse link
G Hmga2 high mobility group AT-hook 2 enables ISO
ISS		 (PMID:14645522)
GO_REF:0000024		 RGD
UniProt		 PMID:14645522 GO_REF:0000024 NCBI chr 7:55,877,145...55,998,813
Ensembl chr 7:55,880,112...55,994,784 		JBrowse link
G Jdp2 Jun dimerization protein 2 enables ISO (PMID:11231009) RGD PMID:11231009 NCBI chr 6:105,261,619...105,302,386
Ensembl chr 6:105,261,373...105,301,485 		JBrowse link
G Jun Jun proto-oncogene, AP-1 transcription factor subunit enables ISO (PMID:19861239) RGD PMID:19861239 NCBI chr 5:109,894,175...109,897,268
Ensembl chr 5:109,893,145...109,897,656 		JBrowse link
G Nr4a3 nuclear receptor subfamily 4, group A, member 3 enables ISS
ISO		 GO_REF:0000024
(PMID:23897430)		 UniProt
RGD		 PMID:23897430 GO_REF:0000024 NCBI chr 5:62,361,588...62,401,489
Ensembl chr 5:62,361,822...62,402,733 		JBrowse link
G Tcf12 transcription factor 12 IDA RGD PMID:7683670 RGD:729997 NCBI chr 8:72,490,447...72,799,265
Ensembl chr 8:72,492,567...72,799,201 		JBrowse link
carbohydrate response element binding term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Mlxipl MLX interacting protein-like enables NAS PMID:20025850 BHF-UCL PMID:20025850 RGD:8554541 NCBI chr12:21,541,608...21,577,120
Ensembl chr12:21,543,576...21,577,112 		JBrowse link
centromeric DNA binding term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Cenpc centromere protein C enables IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr14:21,988,067...22,046,732
Ensembl chr14:21,988,144...22,055,476 		JBrowse link
G Mlh3 mutL homolog 3 enables ISO (PMID:16260499) RGD PMID:16260499 NCBI chr 6:104,881,483...104,917,686
Ensembl chr 6:104,881,483...104,917,728 		JBrowse link
G Msh2 mutS homolog 2 enables IEA
ISO		 GO_REF:0000107
(PMID:16260499)		 Ensembl
RGD		 PMID:16260499 GO_REF:0000107 NCBI chr 6:6,813,793...6,872,960
Ensembl chr 6:6,813,795...6,872,938 		JBrowse link
G Msh3 mutS homolog 3 enables ISO (PMID:16260499) RGD PMID:16260499 NCBI chr 2:23,444,326...23,585,777 JBrowse link
chromatin loop anchoring activity term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ctcf CCCTC-binding factor enables ISO
IEA		 (PMID:34856126)
GO_REF:0000107		 RGD
Ensembl		 PMID:34856126 GO_REF:0000107 NCBI chr19:33,521,726...33,571,124
Ensembl chr19:33,529,319...33,571,123 		JBrowse link
cis-regulatory region sequence-specific DNA binding term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ahr aryl hydrocarbon receptor enables ISO
IEA		 (PMID:23275542)
GO_REF:0000107		 RGD
Ensembl		 PMID:23275542 GO_REF:0000107 NCBI chr 6:52,234,089...52,271,568
Ensembl chr 6:52,234,089...52,271,568 		JBrowse link
G Arnt aryl hydrocarbon receptor nuclear translocator enables ISO (PMID:23275542) RGD PMID:23275542 NCBI chr 2:182,997,731...183,056,584
Ensembl chr 2:182,997,736...183,056,580 		JBrowse link
G Atf2 activating transcription factor 2 enables ISO (PMID:2196176) RGD PMID:2196176 NCBI chr 3:58,718,323...58,795,280
Ensembl chr 3:58,718,332...58,795,236 		JBrowse link
G Ctcf CCCTC-binding factor enables ISO (PMID:28636939) RGD PMID:28636939 NCBI chr19:33,521,726...33,571,124
Ensembl chr19:33,529,319...33,571,123 		JBrowse link
G Cxxc1 CXXC finger protein 1 IDA RGD PMID:21814290 RGD:9587757 NCBI chr18:67,813,185...67,818,556
Ensembl chr18:67,813,206...67,818,551 		JBrowse link
G Dmrt1 doublesex and mab-3 related transcription factor 1 enables ISO (PMID:20616082), (PMID:20951351) RGD PMID:20616082 PMID:20951351 NCBI chr 1:223,142,859...223,241,333
Ensembl chr 1:223,142,859...223,241,333 		JBrowse link
G E2f1 E2F transcription factor 1 enables ISO (PMID:15735762) RGD PMID:15735762 NCBI chr 3:143,064,535...143,075,362
Ensembl chr 3:143,049,478...143,075,361 		JBrowse link
G E2f2 E2F transcription factor 2 enables ISO (PMID:15735762) RGD PMID:15735762 NCBI chr 5:148,399,193...148,422,595
Ensembl chr 5:148,399,642...148,421,217 		JBrowse link
G E2f3 E2F transcription factor 3 enables ISO (PMID:15735762) RGD PMID:15735762 NCBI chr17:34,601,756...34,679,139
Ensembl chr17:34,601,830...34,676,253 		JBrowse link
G E2f7 E2F transcription factor 7 enables ISO (PMID:22903062) RGD PMID:22903062 NCBI chr 7:46,150,533...46,192,739
Ensembl chr 7:46,151,293...46,192,734 		JBrowse link
G E2f8 E2F transcription factor 8 enables ISO (PMID:22903062) RGD PMID:22903062 NCBI chr 1:98,565,717...98,584,265
Ensembl chr 1:98,565,717...98,584,098 		JBrowse link
G Ell elongation factor for RNA polymerase II enables IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr16:18,843,775...18,891,484
Ensembl chr16:18,843,780...18,891,118 		JBrowse link
G Ell2 elongation factor for RNA polymerase II 2 enables IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr 2:5,189,375...5,258,781
Ensembl chr 2:5,189,971...5,258,781 		JBrowse link
G Ell2l1 elongation factor for RNA polymerase II 2 like 1 enables IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr  X:145,878,600...145,888,249
Ensembl chr  X:145,878,614...145,887,896 		JBrowse link
G Ell3 elongation factor for RNA polymerase II 3 enables ISS
IBA
IEA		 GO_REF:0000024
GO_REF:0000033
GO_REF:0000107		 UniProt
GO_Central
Ensembl		 GO_REF:0000024 GO_REF:0000033 GO_REF:0000107 NCBI chr 3:108,413,035...108,417,181
Ensembl chr 3:108,410,448...108,417,132 		JBrowse link
G Ep300 E1A binding protein p300 IDA RGD PMID:19057620 RGD:2311715 NCBI chr 7:113,108,476...113,178,529
Ensembl chr 7:113,106,247...113,136,088
Ensembl chr 7:113,106,247...113,136,088 		JBrowse link
G Epas1 endothelial PAS domain protein 1 enables ISO (PMID:12464608) RGD PMID:12464608 NCBI chr 6:7,790,236...7,871,717
Ensembl chr 6:7,790,647...7,871,228 		JBrowse link
G Esrrb estrogen-related receptor beta enables ISS
ISO		 GO_REF:0000024
(PMID:23508100), (PMID:26206133)		 UniProt
RGD		 PMID:23508100 PMID:26206133 GO_REF:0000024 NCBI chr 6:106,007,701...106,163,136
Ensembl chr 6:106,008,095...106,160,791 		JBrowse link
G Foxn2 forkhead box N2 enables IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr 6:6,018,653...6,065,226
Ensembl chr 6:6,018,879...6,064,278 		JBrowse link
G Foxn3 forkhead box N3 enables IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr 6:118,462,018...118,842,442
Ensembl chr 6:118,466,025...118,842,401 		JBrowse link
G Foxn4 forkhead box N4 enables ISO
IBA		 (PMID:22323600)
GO_REF:0000033		 RGD
GO_Central		 PMID:22323600 GO_REF:0000033 NCBI chr12:42,336,706...42,359,932
Ensembl chr12:42,340,323...42,359,921 		JBrowse link
G Gata1 GATA binding protein 1 enables ISO (PMID:20855530) RGD PMID:20855530 NCBI chr  X:14,529,706...14,537,530
Ensembl chr  X:14,529,702...14,537,530 		JBrowse link
G Gata3 GATA binding protein 3 enables ISO (PMID:19232384)
(PMID:19666510), (PMID:20855530)		 RGD PMID:19232384 PMID:19666510 PMID:20855530 NCBI chr17:68,643,760...68,666,000
Ensembl chr17:68,643,873...68,665,391 		JBrowse link
G Gata4 GATA binding protein 4 enables IDA PMID:20855530 UniProt PMID:20855530 RGD:8554432 NCBI chr15:37,459,601...37,531,291
Ensembl chr15:37,459,601...37,505,636 		JBrowse link
G Gata5 GATA binding protein 5 enables ISO (PMID:20855530) RGD PMID:20855530 NCBI chr 3:167,418,563...167,426,751
Ensembl chr 3:167,418,565...167,426,751 		JBrowse link
G Gata6 GATA binding protein 6 enables IDA PMID:20855530 UniProt PMID:20855530 RGD:8554432 NCBI chr18:2,188,121...2,219,532
Ensembl chr18:2,188,121...2,219,532 		JBrowse link
G Hey1 hes-related family bHLH transcription factor with YRPW motif 1 enables ISO (PMID:18239137) RGD PMID:18239137 NCBI chr 2:93,096,605...93,100,316
Ensembl chr 2:93,095,498...93,100,312 		JBrowse link
G Hey2 hes-related family bHLH transcription factor with YRPW motif 2 enables ISO (PMID:18239137) RGD PMID:18239137 NCBI chr 1:26,822,131...26,832,218
Ensembl chr 1:26,822,131...26,832,218 		JBrowse link
G Hif1a hypoxia inducible factor 1 subunit alpha enables ISO (PMID:31368162) RGD PMID:31368162 NCBI chr 6:92,624,059...92,669,262
Ensembl chr 6:92,624,390...92,669,261 		JBrowse link
G Hmga1 high mobility group AT-hook 1 enables ISO (PMID:9253416) RGD PMID:9253416 NCBI chr20:5,611,088...5,618,755
Ensembl chr20:5,611,694...5,618,752 		JBrowse link
G Hmgb2 high mobility group box 2 enables ISS
ISO		 GO_REF:0000024
(PMID:23495099)		 AgBase
RGD		 PMID:23495099 GO_REF:0000024 NCBI chr16:32,710,651...32,713,230
Ensembl chr16:32,710,658...32,713,140 		JBrowse link
G Hmgb2l1 high mobility group box 2-like 1 enables ISS GO_REF:0000024 AgBase GO_REF:0000024 NCBI chr11:47,252,583...47,253,646
Ensembl chr11:47,252,569...47,253,669 		JBrowse link
G Hmgb2l2 high mobility group box 2 like 2 enables ISS GO_REF:0000024 AgBase GO_REF:0000024 NCBI chr14:69,045,590...69,046,623
Ensembl chr14:69,045,641...69,046,640 		JBrowse link
G Hnf1b HNF1 homeobox B enables IDA
IEA
ISO		 GO_REF:0000107
(PMID:14570708), (PMID:15067314), (PMID:16274963), (PMID:1685988)		 Ensembl
RGD		 PMID:1685988 PMID:14570708 PMID:15067314 PMID:16274963 PMID:1673926 GO_REF:0000107, RGD:729944 NCBI chr10:68,735,894...68,789,888
Ensembl chr10:68,735,894...68,789,888 		JBrowse link
G Hnf4a hepatocyte nuclear factor 4, alpha IDA RGD PMID:16640558 RGD:12904755 NCBI chr 3:152,186,787...152,248,320
Ensembl chr 3:152,186,787...152,248,320 		JBrowse link
G Hnrnpk heterogeneous nuclear ribonucleoprotein K IDA RGD PMID:15361071 RGD:10002777 NCBI chr17:6,262,936...6,275,001
Ensembl chr17:6,262,998...6,274,997 		JBrowse link
G Hoxa13 homeo box A13 enables ISO (PMID:27706137) RGD PMID:27706137 NCBI chr 4:81,358,956...81,361,091
Ensembl chr 4:81,358,956...81,361,091 		JBrowse link
G Hoxd13 homeo box D13 enables ISO (PMID:27706137) RGD PMID:27706137 NCBI chr 3:59,570,647...59,573,963
Ensembl chr 3:59,570,646...59,573,963 		JBrowse link
G Irf4 interferon regulatory factor 4 enables ISO (PMID:30413670) RGD PMID:30413670 NCBI chr17:33,721,800...33,742,570
Ensembl chr17:33,721,811...33,740,070 		JBrowse link
G Irf7 interferon regulatory factor 7 enables ISO (PMID:27129230) RGD PMID:27129230 NCBI chr 1:196,367,380...196,370,943
Ensembl chr 1:196,367,361...196,370,832 		JBrowse link
G Isl1 ISL LIM homeobox 1 enables IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr 2:48,079,412...48,090,704
Ensembl chr 2:48,080,522...48,095,584 		JBrowse link
G Isl2 ISL LIM homeobox 2 enables IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr 8:55,923,805...55,928,790
Ensembl chr 8:55,923,805...55,928,790 		JBrowse link
G Lef1 lymphoid enhancer binding factor 1 enables ISO (PMID:15545629) RGD PMID:15545629 NCBI chr 2:219,666,549...219,779,815
Ensembl chr 2:219,666,592...219,779,794 		JBrowse link
G Lhx1 LIM homeobox 1 enables ISO (PMID:26494787) RGD PMID:26494787 NCBI chr10:69,396,829...69,403,617
Ensembl chr10:69,396,829...69,403,617 		JBrowse link
G Mef2c myocyte enhancer factor 2C enables ISO (PMID:16140986), (PMID:20399744) RGD PMID:16140986 PMID:20399744 NCBI chr 2:13,973,299...14,136,065
Ensembl chr 2:13,993,438...14,132,880 		JBrowse link
G Mesp1 mesoderm posterior bHLH transcription factor 1 enables ISO (PMID:18593560) RGD PMID:18593560 NCBI chr 1:133,738,357...133,739,875
Ensembl chr 1:133,738,357...133,739,875 		JBrowse link
G Mixl1 Mix paired-like homeobox 1 enables ISO (PMID:22265737) RGD PMID:22265737 NCBI chr13:92,422,031...92,426,065
Ensembl chr13:92,422,031...92,426,065 		JBrowse link
G Msx1 msh homeobox 1 enables ISO (PMID:27741242) RGD PMID:27741242 NCBI chr14:72,961,036...72,964,970
Ensembl chr14:72,961,148...72,964,966 		JBrowse link
G Mtf1 metal-regulatory transcription factor 1 enables ISO (PMID:15735762)
(PMID:10931824), (PMID:10952993), (PMID:16886906), (PMID:9582278)		 RGD PMID:9582278 PMID:10931824 PMID:10952993 PMID:15735762 PMID:16886906 NCBI chr 5:137,062,319...137,107,136
Ensembl chr 5:137,062,376...137,107,136 		JBrowse link
G Myc MYC proto-oncogene, bHLH transcription factor enables ISO (PMID:15511642) RGD PMID:15511642 NCBI chr 7:93,593,705...93,598,633
Ensembl chr 7:93,593,705...93,598,630 		JBrowse link
G Myod1 myogenic differentiation 1 enables ISO (PMID:12486129), (PMID:19121967) RGD PMID:12486129 PMID:19121967 NCBI chr 1:96,884,864...96,887,574
Ensembl chr 1:96,884,948...96,887,554 		JBrowse link
G Myog myogenin enables ISO (PMID:20399744) RGD PMID:20399744 NCBI chr13:45,745,455...45,748,044
Ensembl chr13:45,745,436...45,748,039 		JBrowse link
G Myt1 myelin transcription factor 1 enables ISO (PMID:17442045) RGD PMID:17442045 NCBI chr 3:168,890,466...168,950,341
Ensembl chr 3:168,886,089...168,950,341 		JBrowse link
G Nfe2 nuclear factor, erythroid 2 contributes_to ISO (PMID:16263792) RGD PMID:16263792 NCBI chr 7:134,382,758...134,395,364
Ensembl chr 7:134,382,761...134,390,108 		JBrowse link
G Nfic nuclear factor I/C IDA RGD PMID:10521600 RGD:633408 NCBI chr 7:8,278,210...8,309,936
Ensembl chr 7:8,253,361...8,309,936 		JBrowse link
G Nkx2-2 NK2 homeobox 2 enables ISO (PMID:19759004) RGD PMID:19759004 NCBI chr 3:134,619,701...134,630,282
Ensembl chr 3:134,620,039...134,622,411 		JBrowse link
G Notch1 notch receptor 1 enables ISO (PMID:18239137) RGD PMID:18239137 NCBI chr 3:9,277,955...9,323,531
Ensembl chr 3:9,278,086...9,323,531 		JBrowse link
G Notch2 notch receptor 2 enables IEA
ISO		 GO_REF:0000107
(PMID:18239137)		 Ensembl
RGD		 PMID:18239137 GO_REF:0000107 NCBI chr 2:185,610,594...185,744,088
Ensembl chr 2:185,610,589...185,744,088 		JBrowse link
G Notch4 notch receptor 4 enables ISO (PMID:18239137) RGD PMID:18239137 NCBI chr20:4,160,362...4,184,466
Ensembl chr20:4,160,445...4,184,465 		JBrowse link
G Nr1d2 nuclear receptor subfamily 1, group D, member 2 enables ISS
ISO		 GO_REF:0000024
(PMID:19682428), (PMID:23221024)		 UniProt
RGD		 PMID:19682428 PMID:23221024 GO_REF:0000024 NCBI chr15:7,524,257...7,550,553
Ensembl chr15:7,524,257...7,550,553 		JBrowse link
G Pax2 paired box 2 enables ISS
ISO		 GO_REF:0000024
(PMID:17785448)
(PMID:19118900)		 UniProt
RGD		 PMID:17785448 PMID:19118900 GO_REF:0000024 NCBI chr 1:243,616,509...243,697,454
Ensembl chr 1:243,616,606...243,695,321 		JBrowse link
G Pou5f1 POU class 5 homeobox 1 enables ISS
ISO		 GO_REF:0000024
(PMID:23495099)		 AgBase
RGD		 PMID:23495099 GO_REF:0000024 NCBI chr20:3,223,128...3,227,891
Ensembl chr20:3,223,129...3,227,891 		JBrowse link
G Rad21 RAD21 cohesin complex component enables ISO (PMID:28636939) RGD PMID:28636939 NCBI chr 7:83,287,867...83,314,810
Ensembl chr 7:83,287,870...83,314,817 		JBrowse link
G Runx2 RUNX family transcription factor 2 enables ISO (PMID:31545469) RGD PMID:31545469 NCBI chr 9:16,167,504...16,492,826
Ensembl chr 9:16,167,482...16,492,167 		JBrowse link
G Sall1 spalt-like transcription factor 1 enables ISO (PMID:21062744) RGD PMID:21062744 NCBI chr19:18,005,782...18,022,705
Ensembl chr19:18,007,503...18,022,705 		JBrowse link
G Scx scleraxis bHLH transcription factor enables ISO (PMID:17430895) RGD PMID:17430895 NCBI chr 7:108,176,608...108,178,626
Ensembl chr 7:108,176,608...108,178,626 		JBrowse link
G Smad3 SMAD family member 3 enables ISS
ISO		 GO_REF:0000024
(PMID:21947082), (PMID:32141990)		 UniProt
RGD		 PMID:21947082 PMID:32141990 GO_REF:0000024 NCBI chr 8:64,126,829...64,236,960
Ensembl chr 8:64,110,039...64,236,960 		JBrowse link
G Smc3 structural maintenance of chromosomes 3 enables ISO (PMID:28636939) RGD PMID:28636939 NCBI chr 1:252,601,422...252,644,522
Ensembl chr 1:252,601,753...252,644,522 		JBrowse link
G Sox11 SRY-box transcription factor 11 enables ISS
ISO		 GO_REF:0000024
(PMID:19808959), (PMID:21527504)		 UniProt
RGD		 PMID:19808959 PMID:21527504 GO_REF:0000024 NCBI chr 6:44,008,333...44,010,354
Ensembl chr 6:44,008,340...44,010,354 		JBrowse link
G Sox5 SRY-box transcription factor 5 enables IDA PMID:26150426 UniProt PMID:26150426 RGD:11526869 NCBI chr 4:176,781,375...177,736,833
Ensembl chr 4:176,785,892...177,736,852 		JBrowse link
G Sox6 SRY-box transcription factor 6 enables IDA PMID:26150426 UniProt PMID:26150426 RGD:11526869 NCBI chr 1:169,723,306...170,334,846
Ensembl chr 1:169,729,194...170,277,386 		JBrowse link
G Sox8 SRY-box transcription factor 8 enables ISO (PMID:12732652), (PMID:15102707) RGD PMID:12732652 PMID:15102707 NCBI chr10:14,584,829...14,589,818
Ensembl chr10:14,584,829...14,589,818 		JBrowse link
G Sox9 SRY-box transcription factor 9 enables IDA
ISO
ISS		 PMID:10805756
(PMID:10805756), (PMID:17525254), (PMID:22500632)
PMID:26150426
GO_REF:0000024		 RGD
UniProt		 PMID:10805756 PMID:17525254 PMID:22500632 PMID:10805756 PMID:26150426 GO_REF:0000024, RGD:8553866, RGD:11526869 NCBI chr10:97,806,485...97,811,994
Ensembl chr10:97,806,485...97,811,994 		JBrowse link
G Sp1 Sp1 transcription factor enables ISO (PMID:15511642), (PMID:19943855), (PMID:9705320) RGD PMID:9705320 PMID:15511642 PMID:19943855 NCBI chr 7:133,541,302...133,571,961
Ensembl chr 7:133,541,491...133,571,961 		JBrowse link
G Sp3 Sp3 transcription factor enables ISO (PMID:15511642), (PMID:19943855) RGD PMID:15511642 PMID:19943855 NCBI chr 3:57,811,855...57,857,150
Ensembl chr 3:57,812,075...57,860,342 		JBrowse link
G Spi1 Spi-1 proto-oncogene enables ISO (PMID:28481873), (PMID:30718772), (PMID:31018969), (PMID:31314592)
(PMID:28338898), (PMID:30171019), (PMID:30355733), (PMID:30413670), (PMID:30718772), (PMID:31314592)		 RGD PMID:28338898 PMID:28481873 PMID:30171019 PMID:30355733 PMID:30413670 More... NCBI chr 3:77,059,744...77,093,730
Ensembl chr 3:77,073,012...77,092,393 		JBrowse link
G Tbx19 T-box transcription factor 19 enables ISO (PMID:23070814) RGD PMID:23070814 NCBI chr13:77,450,848...77,484,475
Ensembl chr13:77,450,849...77,504,163 		JBrowse link
G Tcf3 transcription factor 3 enables ISO (PMID:16140986) RGD PMID:16140986 NCBI chr 7:9,280,571...9,302,315
Ensembl chr 7:9,280,571...9,302,314 		JBrowse link
G Tfap2a transcription factor AP-2 alpha enables ISO (PMID:19943855) RGD PMID:19943855 NCBI chr17:24,028,716...24,047,507
Ensembl chr17:24,024,432...24,047,507 		JBrowse link
G Tfap2b transcription factor AP-2 beta enables ISO (PMID:16373396) RGD PMID:16373396 NCBI chr 9:21,786,251...21,816,054
Ensembl chr 9:21,786,258...21,814,520 		JBrowse link
G Tfcp2 transcription factor CP2 enables ISO (PMID:16263792) RGD PMID:16263792 NCBI chr 7:131,616,777...131,658,995
Ensembl chr 7:131,616,785...131,658,939 		JBrowse link
G Tfdp1 transcription factor Dp-1 enables ISO (PMID:15448153) RGD PMID:15448153 NCBI chr16:76,162,040...76,200,871
Ensembl chr16:76,162,043...76,200,817 		JBrowse link
G Tiparp TCDD-inducible poly(ADP-ribose) polymerase enables ISO (PMID:23275542) RGD PMID:23275542 NCBI chr 2:149,753,682...149,780,327
Ensembl chr 2:149,753,682...149,780,327 		JBrowse link
G Tp53 tumor protein p53 enables ISO (PMID:10329733) RGD PMID:10329733 NCBI chr10:54,300,070...54,311,525
Ensembl chr10:54,300,048...54,311,524 		JBrowse link
G Tug1 taurine up-regulated 1 enables ISO (PMID:27760051) RGD PMID:27760051 NCBI chr14:78,519,894...78,526,927
Ensembl chr14:78,522,506...78,526,927 		JBrowse link
G Twist1 twist family bHLH transcription factor 1 enables ISO (PMID:27027434) RGD PMID:27027434 NCBI chr 6:50,674,910...50,676,904
Ensembl chr 6:50,674,678...50,677,653 		JBrowse link
G Uhrf1 ubiquitin-like with PHD and ring finger domains 1 enables ISO
IEA		 (PMID:10646863)
GO_REF:0000107		 RGD
Ensembl		 PMID:10646863 GO_REF:0000107 NCBI chr 9:1,133,117...1,154,639
Ensembl chr 9:1,134,909...1,154,631 		JBrowse link
G Xbp1 X-box binding protein 1 enables ISO
ISS		 (PMID:2196176)
GO_REF:0000024		 RGD
UniProt		 PMID:2196176 GO_REF:0000024 NCBI chr14:80,390,629...80,395,713
Ensembl chr14:80,390,643...80,395,693 		JBrowse link
G Yy1 YY1 transcription factor enables ISO (PMID:15329343), (PMID:16260628) RGD PMID:15329343 PMID:16260628 NCBI chr 6:127,706,739...127,736,499
Ensembl chr 6:127,707,596...127,732,747 		JBrowse link
G Yy2 YY2 transcription factor enables ISO (PMID:16260628) RGD PMID:16260628 NCBI chr  X:37,438,425...37,442,047
Ensembl chr  X:37,410,811...37,464,430 		JBrowse link
G Zbtb7b zinc finger and BTB domain containing 7B enables ISO (PMID:8702912) RGD PMID:8702912 NCBI chr 2:174,795,831...174,811,980
Ensembl chr 2:174,797,453...174,814,236 		JBrowse link
G Zfp322a zinc finger protein 322a enables ISO (PMID:24550733) RGD PMID:24550733 NCBI chr17:41,773,789...41,789,654
Ensembl chr17:41,773,782...41,790,078 		JBrowse link
G Zfp395 zinc finger protein 395 enables ISO (PMID:11853404)
(PMID:17693064)		 RGD PMID:11853404 PMID:17693064 NCBI chr15:39,581,603...39,621,911
Ensembl chr15:39,608,080...39,619,950 		JBrowse link
G Zfp516 zinc finger protein 516 enables ISO (PMID:25578880) RGD PMID:25578880 NCBI chr18:76,286,453...76,386,526
Ensembl chr18:76,302,096...76,385,269 		JBrowse link
G Zfp704 zinc finger protein 704 enables ISO (PMID:17693064) RGD PMID:17693064 NCBI chr 2:92,171,804...92,356,059
Ensembl chr 2:92,171,496...92,351,282 		JBrowse link
core promoter sequence-specific DNA binding term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ago1 argonaute RISC component 1 enables ISO (PMID:25336585) RGD PMID:25336585 NCBI chr 5:138,722,111...138,757,118
Ensembl chr 5:138,722,111...138,773,546 		JBrowse link
G Ago2 argonaute RISC catalytic component 2 enables IEA
ISO		 GO_REF:0000107
(PMID:25336585)		 Ensembl
RGD		 PMID:25336585 GO_REF:0000107 NCBI chr 7:105,018,202...105,105,118
Ensembl chr 7:105,029,120...105,104,974 		JBrowse link
G Drap1 Dr1 associated protein 1 enables IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr 1:202,731,775...202,734,468
Ensembl chr 1:202,731,788...202,734,425 		JBrowse link
G Fendrr FOXF1 adjacent non-coding developmental regulatory RNA enables ISO (PMID:23369715) RGD PMID:23369715 NCBI chr19:49,127,225...49,152,780
Ensembl chr19:49,121,214...49,153,240 		JBrowse link
G Foxp1 forkhead box P1 enables ISO (PMID:28218735) RGD PMID:28218735 NCBI chr 4:131,559,599...132,155,092
Ensembl chr 4:131,564,756...132,112,258 		JBrowse link
G Hdac1 histone deacetylase 1 enables ISO (PMID:23629966) RGD PMID:23629966 NCBI chr 5:141,853,992...141,881,057
Ensembl chr 5:141,853,989...141,881,111 		JBrowse link
G Isl1 ISL LIM homeobox 1 IDA RGD PMID:11043578 RGD:8554127 NCBI chr 2:48,079,412...48,090,704
Ensembl chr 2:48,080,522...48,095,584 		JBrowse link
G Jph2 junctophilin 2 enables ISS
ISO		 GO_REF:0000024
(PMID:30409805)		 UniProt
RGD		 PMID:30409805 GO_REF:0000024 NCBI chr 3:151,994,768...152,058,941
Ensembl chr 3:151,994,778...152,058,904 		JBrowse link
G Kcnip3 potassium voltage-gated channel interacting protein 3 enables ISO (PMID:15746104) RGD PMID:15746104 NCBI chr 3:114,677,027...114,742,923
Ensembl chr 3:114,677,030...114,743,556 		JBrowse link
G Klf10 KLF transcription factor 10 enables ISS
ISO
IEA		 GO_REF:0000024
(PMID:20070857)
GO_REF:0000107		 UniProt
RGD
Ensembl		 PMID:20070857 GO_REF:0000024 GO_REF:0000107 NCBI chr 7:69,467,658...69,473,726
Ensembl chr 7:69,465,619...69,473,994 		JBrowse link
G Mmp12 matrix metallopeptidase 12 enables IEA
ISO		 GO_REF:0000107
(PMID:24784232)		 Ensembl
RGD		 PMID:24784232 GO_REF:0000107 NCBI chr 8:4,581,785...4,591,687
Ensembl chr 8:4,581,785...4,599,611 		JBrowse link
G Myc MYC proto-oncogene, bHLH transcription factor enables ISO (PMID:30873824) RGD PMID:30873824 NCBI chr 7:93,593,705...93,598,633
Ensembl chr 7:93,593,705...93,598,630 		JBrowse link
G Nkx2-1 NK2 homeobox 1 enables IMP PMID:9425125 CAFA PMID:9425125 RGD:12792996 NCBI chr 6:73,996,601...74,001,483
Ensembl chr 6:73,996,601...73,999,791 		JBrowse link
G Npm1 nucleophosmin 1 enables ISO (PMID:19160485) RGD PMID:19160485 NCBI chr10:17,741,512...17,751,626
Ensembl chr10:17,739,941...17,751,645 		JBrowse link
G Nr3c1 nuclear receptor subfamily 3, group C, member 1 enables ISO
IEA		 (PMID:17081986)
GO_REF:0000107		 RGD
Ensembl		 PMID:17081986 GO_REF:0000107 NCBI chr18:31,271,681...31,393,320
Ensembl chr18:31,271,681...31,393,375 		JBrowse link
G Polr2a RNA polymerase II subunit A enables ISO (PMID:22723415) RGD PMID:22723415 NCBI chr10:54,452,438...54,478,486
Ensembl chr10:54,452,441...54,478,455 		JBrowse link
G Snapc3 small nuclear RNA activating complex, polypeptide 3 contributes_to IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr 5:97,817,827...97,868,494
Ensembl chr 5:97,817,947...97,844,650 		JBrowse link
G Taf4 TATA-box binding protein associated factor 4 contributes_to ISO (PMID:15601843) RGD PMID:15601843 NCBI chr 3:167,017,992...167,083,413
Ensembl chr 3:167,017,993...167,083,356 		JBrowse link
G Tbp TATA box binding protein enables ISO (PMID:9841876) RGD PMID:9841876 NCBI chr 1:56,463,330...56,480,430
Ensembl chr 1:56,463,618...56,510,016 		JBrowse link
G Tp53 tumor protein p53 enables ISO
IEA		 (PMID:23629966)
GO_REF:0000107		 RGD
Ensembl		 PMID:23629966 GO_REF:0000107 NCBI chr10:54,300,070...54,311,525
Ensembl chr10:54,300,048...54,311,524 		JBrowse link
G Zbtb17 zinc finger and BTB domain containing 17 enables ISO (PMID:19160485) RGD PMID:19160485 NCBI chr 5:153,753,508...153,774,613
Ensembl chr 5:153,753,569...153,774,609 		JBrowse link
dinucleotide insertion or deletion binding term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Msh2 mutS homolog 2 contributes_to ISO (PMID:8942985) RGD PMID:8942985 NCBI chr 6:6,813,793...6,872,960
Ensembl chr 6:6,813,795...6,872,938 		JBrowse link
G Msh3 mutS homolog 3 contributes_to ISO (PMID:8942985) RGD PMID:8942985 NCBI chr 2:23,444,326...23,585,777 JBrowse link
G Pcna proliferating cell nuclear antigen enables ISO (PMID:11005803) RGD PMID:11005803 NCBI chr 3:119,499,039...119,502,911
Ensembl chr 3:119,498,810...119,502,995 		JBrowse link
dinucleotide repeat insertion binding term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Msh2 mutS homolog 2 contributes_to
enables		 ISO
IEA		 (PMID:8942985)
GO_REF:0000107		 RGD
Ensembl		 PMID:8942985 GO_REF:0000107 NCBI chr 6:6,813,793...6,872,960
Ensembl chr 6:6,813,795...6,872,938 		JBrowse link
G Msh3 mutS homolog 3 contributes_to ISO (PMID:8942985) RGD PMID:8942985 NCBI chr 2:23,444,326...23,585,777 JBrowse link
DNA replication origin binding term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Cdc45 cell division cycle 45 enables IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr11:82,185,427...82,210,630
Ensembl chr11:82,185,473...82,210,619 		JBrowse link
G Ddx11 DEAD/H-box helicase 11 enables ISO (PMID:27477908) RGD PMID:27477908 NCBI chr 9:105,833,234...105,862,844
Ensembl chr 9:105,833,504...105,862,550 		JBrowse link
G Dhx9 DExH-box helicase 9 enables ISO (PMID:24990949) RGD PMID:24990949 NCBI chr13:65,602,322...65,639,098
Ensembl chr13:65,602,323...65,639,069 		JBrowse link
G Grwd1 glutamate-rich WD repeat containing 1 enables ISS
IEA
ISO		 GO_REF:0000024
GO_REF:0000107
(PMID:25990725)		 UniProt
Ensembl
RGD		 PMID:25990725 GO_REF:0000024 GO_REF:0000107 NCBI chr 1:96,301,260...96,306,962
Ensembl chr 1:96,301,261...96,307,201 		JBrowse link
G Kat7 lysine acetyltransferase 7 enables ISO (PMID:21856198) RGD PMID:21856198 NCBI chr10:80,221,519...80,255,590
Ensembl chr10:80,221,524...80,255,567 		JBrowse link
G Mcm10 minichromosome maintenance 10 replication initiation factor enables IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr17:73,263,788...73,288,346
Ensembl chr17:73,266,095...73,287,364 		JBrowse link
G Mcm2 minichromosome maintenance complex component 2 enables ISO (PMID:12941272) RGD PMID:12941272 NCBI chr 4:121,346,434...121,360,962
Ensembl chr 4:121,346,434...121,360,847 		JBrowse link
G Mcm5 minichromosome maintenance complex component 5 enables IEA GO_REF:0000104 UniProt GO_REF:0000104 NCBI chr19:13,483,030...13,504,389
Ensembl chr19:13,483,066...13,504,389 		JBrowse link
G Orc2 origin recognition complex, subunit 2 enables IEA
ISO
IBA		 GO_REF:0000104
(PMID:12941272)
GO_REF:0000033		 UniProt
RGD
GO_Central		 PMID:12941272 GO_REF:0000033 GO_REF:0000104 NCBI chr 9:60,001,631...60,038,301
Ensembl chr 9:60,001,910...60,038,195 		JBrowse link
G Orc3 origin recognition complex, subunit 3 enables IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr 5:49,123,758...49,181,552
Ensembl chr 5:49,126,955...49,181,633 		JBrowse link
G Orc4 origin recognition complex, subunit 4 enables ISO
IBA
IEA
ISS		 (PMID:9353276)
GO_REF:0000033
GO_REF:0000107
GO_REF:0000024		 RGD
GO_Central
Ensembl
UniProt		 PMID:9353276 GO_REF:0000024 GO_REF:0000033 GO_REF:0000107 NCBI chr 3:33,290,844...33,334,022
Ensembl chr 3:33,294,355...33,333,824 		JBrowse link
G Orc5 origin recognition complex, subunit 5 enables IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr 4:12,548,007...12,612,611
Ensembl chr 4:12,548,007...12,612,568 		JBrowse link
G Pola1 DNA polymerase alpha 1, catalytic subunit enables IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr  X:58,034,617...58,348,612
Ensembl chr  X:58,034,619...58,348,536 		JBrowse link
double-stranded methylated DNA binding term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Egr1 early growth response 1 enables ISO
IEA		 (PMID:25258363)
GO_REF:0000107		 RGD
Ensembl		 PMID:25258363 GO_REF:0000107 NCBI chr18:26,462,967...26,466,766
Ensembl chr18:26,462,981...26,466,766 		JBrowse link
G Macroh2a1 macroH2A.1 histone enables ISO (PMID:24071584) RGD PMID:24071584 NCBI chr17:8,479,331...8,542,071
Ensembl chr17:8,479,372...8,542,072 		JBrowse link
G Mbd1 methyl-CpG binding domain protein 1 enables ISO (PMID:11371345) RGD PMID:11371345 NCBI chr18:67,869,870...67,884,501
Ensembl chr18:67,869,992...67,886,554 		JBrowse link
G Mecp2 methyl CpG binding protein 2 enables IDA
ISO
IBA
IEA		 (PMID:14593184), (PMID:15757975)
GO_REF:0000033
(PMID:17296936)
GO_REF:0000104		 RGD
GO_Central
UniProt		 PMID:14593184 PMID:15757975 PMID:17296936 PMID:16314321 PMID:9038338 GO_REF:0000033 GO_REF:0000104, RGD:1601323, RGD:1601325 NCBI chr  X:151,781,177...151,844,687
Ensembl chr  X:151,789,930...151,844,689 		JBrowse link
G Wt1 WT1 transcription factor enables ISO
IEA
ISS		 (PMID:25258363)
GO_REF:0000107
GO_REF:0000024		 RGD
Ensembl
UniProt		 PMID:25258363 GO_REF:0000024 GO_REF:0000107 NCBI chr 3:91,566,540...91,613,653
Ensembl chr 3:91,567,001...91,613,643 		JBrowse link
G Zfp445 zinc finger protein 445 enables ISO (PMID:30602440) RGD PMID:30602440 NCBI chr 8:122,453,175...122,473,355
Ensembl chr 8:122,454,328...122,473,286 		JBrowse link
G Zfp57 zinc finger protein 57 enables ISO (PMID:30602440) RGD PMID:30602440 NCBI chr20:1,521,323...1,534,884
Ensembl chr20:1,521,323...1,529,846 		JBrowse link
double-stranded telomeric DNA binding term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Apex1 apurinic/apyrimidinic endodeoxyribonuclease 1 enables ISO
IEA		 (PMID:24703901)
GO_REF:0000107		 RGD
Ensembl		 PMID:24703901 GO_REF:0000107 NCBI chr15:24,144,595...24,146,785
Ensembl chr15:24,144,362...24,146,785 		JBrowse link
G Hmbox1 homeobox containing 1 enables ISO (PMID:23685356) RGD PMID:23685356 NCBI chr15:39,067,805...39,200,633
Ensembl chr15:39,067,804...39,200,323 		JBrowse link
G Pura purine rich element binding protein A enables ISO
IEA		 (PMID:15777841)
GO_REF:0000107		 RGD
Ensembl		 PMID:15777841 GO_REF:0000107 NCBI chr18:27,885,071...27,905,509
Ensembl chr18:27,884,556...27,905,513 		JBrowse link
G Rad50 RAD50 double strand break repair protein enables IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr10:37,809,353...37,861,309
Ensembl chr10:37,808,726...37,861,396 		JBrowse link
G Terf1 telomeric repeat binding factor 1 enables ISO
IBA		 (PMID:1406665)
GO_REF:0000033
(PMID:12768206), (PMID:12782650), (PMID:15608617), (PMID:21852327)		 RGD
GO_Central		 PMID:1406665 PMID:12768206 PMID:12782650 PMID:15608617 PMID:21852327 GO_REF:0000033 NCBI chr 5:3,443,103...3,472,377
Ensembl chr 5:3,443,106...3,472,340 		JBrowse link
G Terf2 telomeric repeat binding factor 2 enables IBA
ISO		 GO_REF:0000033
(PMID:9326950)
(PMID:18812185), (PMID:21852327), (PMID:28216226)		 GO_Central
RGD		 PMID:9326950 PMID:18812185 PMID:21852327 PMID:28216226 GO_REF:0000033 NCBI chr19:34,976,963...35,005,813
Ensembl chr19:34,977,471...35,005,819 		JBrowse link
G Xrcc5 X-ray repair cross complementing 5 contributes_to ISO (PMID:10409678) RGD PMID:10409678 NCBI chr 9:73,955,216...74,044,020
Ensembl chr 9:73,955,216...74,044,018 		JBrowse link
G Xrcc6 X-ray repair cross complementing 6 contributes_to ISO (PMID:10409678) RGD PMID:10409678 NCBI chr 7:113,542,992...113,563,762
Ensembl chr 7:113,543,057...113,563,762 		JBrowse link
G Zbtb48 zinc finger and BTB domain containing 48 enables ISO (PMID:28082411) RGD PMID:28082411 NCBI chr 5:162,525,234...162,533,604
Ensembl chr 5:162,525,235...162,533,585 		JBrowse link
dsDNA-RNA triple helix-forming chromatin adaptor activity term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Meg3 maternally expressed 3 enables ISO (PMID:38456652) RGD PMID:38456652 NCBI chr 6:128,491,808...128,524,010 JBrowse link
E-box binding term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ahr aryl hydrocarbon receptor enables ISS
ISO		 GO_REF:0000024
(PMID:20106950)		 UniProt
RGD		 PMID:20106950 GO_REF:0000024 NCBI chr 6:52,234,089...52,271,568
Ensembl chr 6:52,234,089...52,271,568 		JBrowse link
G Ascl1 achaete-scute family bHLH transcription factor 1 enables ISO (PMID:10903890), (PMID:11736660) RGD PMID:10903890 PMID:11736660 NCBI chr 7:21,903,136...21,906,003
Ensembl chr 7:21,903,126...21,905,993 		JBrowse link
G Ascl2 achaete-scute family bHLH transcription factor 2 enables ISO (PMID:14561729) RGD PMID:14561729 NCBI chr 1:198,148,999...198,151,406
Ensembl chr 1:198,148,999...198,151,406 		JBrowse link
G Atoh1 atonal bHLH transcription factor 1 enables IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr 4:93,912,068...93,914,163
Ensembl chr 4:93,912,068...93,914,154 		JBrowse link
G Atoh7 atonal bHLH transcription factor 7 enables IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr20:25,530,826...25,531,275
Ensembl chr20:25,530,826...25,531,275 		JBrowse link
G Atoh8 atonal bHLH transcription factor 8 enables ISO
IBA		 (PMID:24236640)
GO_REF:0000033		 RGD
GO_Central		 PMID:24236640 GO_REF:0000033 NCBI chr 4:104,259,992...104,292,168
Ensembl chr 4:104,259,992...104,292,168 		JBrowse link
G Bhlha15 basic helix-loop-helix family, member a15 enables IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr12:10,420,465...10,424,641
Ensembl chr12:10,420,467...10,424,713 		JBrowse link
G Bhlhe22 basic helix-loop-helix family, member e22 enables IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr 2:100,486,400...100,489,510
Ensembl chr 2:100,486,400...100,489,510 		JBrowse link
G Bhlhe23 basic helix-loop-helix family, member e23 enables IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr 3:167,889,009...167,891,223
Ensembl chr 3:167,889,009...167,891,223 		JBrowse link
G Bhlhe40 basic helix-loop-helix family, member e40 enables IEA
ISO
ISS		 GO_REF:0000107
(PMID:12397359), (PMID:15147242), (PMID:17487425), (PMID:30012868)
GO_REF:0000024
(PMID:12397359), (PMID:12624110), (PMID:14672706), (PMID:15193144), (PMID:15560782), (PMID:18411297), (PMID:28797635)		 Ensembl
RGD
UniProt		 PMID:12397359 PMID:12624110 PMID:14672706 PMID:15147242 PMID:15193144 More... GO_REF:0000024 GO_REF:0000107 NCBI chr 4:141,618,453...141,624,154
Ensembl chr 4:141,618,476...141,624,774 		JBrowse link
G Bhlhe41 basic helix-loop-helix family, member e41 enables ISO
IEA		 (PMID:14672706), (PMID:15193144)
(PMID:12397359), (PMID:12657651), (PMID:15147242), (PMID:17487425)
GO_REF:0000107		 RGD
Ensembl		 PMID:12397359 PMID:12657651 PMID:14672706 PMID:15147242 PMID:15193144 More... GO_REF:0000107 NCBI chr 4:178,834,264...178,838,618
Ensembl chr 4:178,834,271...178,838,468 		JBrowse link
G Bmal1 basic helix-loop-helix ARNT like 1 enables ISO
IEA
ISS		 (PMID:12738229), (PMID:23785138)
(PMID:19605937), (PMID:20106950), (PMID:24736997)
GO_REF:0000107
GO_REF:0000024		 RGD
Ensembl
UniProt		 PMID:12738229 PMID:19605937 PMID:20106950 PMID:23785138 PMID:24736997 GO_REF:0000024 GO_REF:0000107 NCBI chr 1:167,331,756...167,430,235
Ensembl chr 1:167,331,633...167,430,231 		JBrowse link
G Bmal2 basic helix-loop-helix ARNT like 2 enables ISO (PMID:12738229)
(PMID:19605937)		 RGD PMID:12738229 PMID:19605937 NCBI chr 4:179,699,432...179,747,710
Ensembl chr 4:179,699,502...179,746,949 		JBrowse link
G Ciart circadian associated repressor of transcription enables ISO (PMID:24736997) RGD PMID:24736997 NCBI chr 2:183,419,819...183,424,845
Ensembl chr 2:183,419,819...183,423,313 		JBrowse link
G Clock clock circadian regulator enables IEA
ISO
IBA
ISS		 GO_REF:0000107
(PMID:12738229), (PMID:19605937), (PMID:20106950), (PMID:20430893), (PMID:30012868)
GO_REF:0000033
GO_REF:0000024
(PMID:18411297), (PMID:23785138)		 Ensembl
RGD
GO_Central
UniProt		 PMID:12738229 PMID:18411297 PMID:19605937 PMID:20106950 PMID:20430893 More... GO_REF:0000024 GO_REF:0000033 GO_REF:0000107 NCBI chr14:31,908,542...31,992,673
Ensembl chr14:31,908,566...31,990,400 		JBrowse link
G Cry1 cryptochrome circadian regulator 1 enables ISO (PMID:19129230), (PMID:21768648), (PMID:23133559), (PMID:24385426) RGD PMID:19129230 PMID:21768648 PMID:23133559 PMID:24385426 NCBI chr 7:18,529,823...18,594,092
Ensembl chr 7:18,529,823...18,594,091 		JBrowse link
G Figla folliculogenesis specific bHLH transcription factor contributes_to ISO UniProtKB:P15923-1 (PMID:15044608) RGD PMID:15044608 NCBI chr 4:118,432,517...118,436,846
Ensembl chr 4:118,432,765...118,436,690 		JBrowse link
G Gata3 GATA binding protein 3 enables ISO (PMID:20855495) RGD PMID:20855495 NCBI chr17:68,643,760...68,666,000
Ensembl chr17:68,643,873...68,665,391 		JBrowse link
G Hand2 heart and neural crest derivatives expressed 2 enables
contributes_to		 ISO
IEA		 (PMID:15486975)
(PMID:11812799)
(PMID:20144608)
GO_REF:0000107		 RGD
Ensembl		 PMID:11812799 PMID:15486975 PMID:20144608 GO_REF:0000107 NCBI chr16:32,917,448...32,920,791
Ensembl chr16:32,917,823...32,919,891 		JBrowse link
G Hdac1 histone deacetylase 1 enables ISO (PMID:24736997) RGD PMID:24736997 NCBI chr 5:141,853,992...141,881,057
Ensembl chr 5:141,853,989...141,881,111 		JBrowse link
G Hes1 hes family bHLH transcription factor 1 enables IDA
ISO
IBA
IEA		 (PMID:10851137)
GO_REF:0000033
GO_REF:0000107		 RGD
GO_Central
Ensembl		 PMID:10851137 PMID:19670267 GO_REF:0000033 GO_REF:0000107, RGD:9685170 NCBI chr11:70,705,763...70,708,176
Ensembl chr11:70,705,764...70,708,192 		JBrowse link
G Hif1a hypoxia inducible factor 1 subunit alpha enables IEA
ISO		 GO_REF:0000107
(PMID:24011070)		 Ensembl
RGD		 PMID:24011070 GO_REF:0000107 NCBI chr 6:92,624,059...92,669,262
Ensembl chr 6:92,624,390...92,669,261 		JBrowse link
G Max MYC associated factor X enables ISO (PMID:16171389) RGD PMID:16171389 NCBI chr 6:95,636,859...95,662,204
Ensembl chr 6:95,636,858...95,662,137 		JBrowse link
G Mitf melanocyte inducing transcription factor enables ISS
ISO
IEA		 GO_REF:0000024
(PMID:23207919)
GO_REF:0000107
(PMID:27889061)		 UniProt
RGD
Ensembl		 PMID:23207919 PMID:27889061 GO_REF:0000024 GO_REF:0000107 NCBI chr 4:130,409,020...130,621,145
Ensembl chr 4:130,409,217...130,621,145 		JBrowse link
G Mybbp1a MYB binding protein 1a enables IEA
ISO		 GO_REF:0000107
UniProtKB:O08785|UniProtKB:P97784 (PMID:19129230)		 Ensembl
RGD		 PMID:19129230 GO_REF:0000107 NCBI chr10:57,056,897...57,067,258
Ensembl chr10:57,056,874...57,067,255 		JBrowse link
G Myc MYC proto-oncogene, bHLH transcription factor enables ISS
ISO		 GO_REF:0000024
(PMID:18818310), (PMID:27791094)
(PMID:19545562)		 UniProt
RGD		 PMID:18818310 PMID:19545562 PMID:27791094 GO_REF:0000024 NCBI chr 7:93,593,705...93,598,633
Ensembl chr 7:93,593,705...93,598,630 		JBrowse link
G Myod1 myogenic differentiation 1 enables IDA
ISO
ISS		 (PMID:10652346), (PMID:15706034)
GO_REF:0000024		 RGD
UniProt		 PMID:10652346 PMID:15706034 PMID:11600477 GO_REF:0000024, RGD:9686083 NCBI chr 1:96,884,864...96,887,574
Ensembl chr 1:96,884,948...96,887,554 		JBrowse link
G Myog myogenin enables ISS
ISO
IEA		 GO_REF:0000024
(PMID:15706034), (PMID:19783823), (PMID:22847234)
GO_REF:0000107		 UniProt
RGD
Ensembl		 PMID:15706034 PMID:19783823 PMID:22847234 GO_REF:0000024 GO_REF:0000107 NCBI chr13:45,745,455...45,748,044
Ensembl chr13:45,745,436...45,748,039 		JBrowse link
G Neurod1 neuronal differentiation 1 enables ISO
IBA		 (PMID:14752053)
(PMID:14697366)
GO_REF:0000033		 RGD
GO_Central		 PMID:14697366 PMID:14752053 GO_REF:0000033 NCBI chr 3:64,359,554...64,363,526
Ensembl chr 3:64,359,395...64,363,649 		JBrowse link
G Neurod2 neuronal differentiation 2 enables ISS
ISO
IBA
IEA		 GO_REF:0000024
(PMID:14697366), (PMID:18214987)
GO_REF:0000033
GO_REF:0000107		 UniProt
RGD
GO_Central
Ensembl		 PMID:14697366 PMID:18214987 GO_REF:0000024 GO_REF:0000033 GO_REF:0000107 NCBI chr10:83,323,801...83,327,986
Ensembl chr10:83,324,442...83,327,986 		JBrowse link
G Neurod4 neuronal differentiation 4 enables IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr 7:7,090,048...7,102,018
Ensembl chr 7:7,090,045...7,102,030 		JBrowse link
G Neurod6 neuronal differentiation 6 enables IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr 4:84,846,659...84,849,905
Ensembl chr 4:84,846,231...84,849,999 		JBrowse link
G Neurog1 neurogenin 1 enables ISS
ISO
IBA		 GO_REF:0000024
(PMID:14697366)
GO_REF:0000033
(PMID:20102160)		 UniProt
RGD
GO_Central		 PMID:14697366 PMID:20102160 GO_REF:0000024 GO_REF:0000033 NCBI chr17:8,362,878...8,364,397
Ensembl chr17:8,362,821...8,364,571 		JBrowse link
G Neurog2 neurogenin 2 enables IBA
ISO		 GO_REF:0000033
(PMID:14697366)		 GO_Central
RGD		 PMID:14697366 GO_REF:0000033 NCBI chr 2:216,092,709...216,095,276
Ensembl chr 2:216,093,363...216,094,154 		JBrowse link
G Neurog3 neurogenin 3 enables IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr20:30,079,780...30,081,262
Ensembl chr20:30,079,780...30,081,262 		JBrowse link
G Nr1d1 nuclear receptor subfamily 1, group D, member 1 enables IEA
ISO
ISS		 GO_REF:0000107
(PMID:18565334)
GO_REF:0000024		 Ensembl
RGD
UniProt		 PMID:18565334 GO_REF:0000024 GO_REF:0000107 NCBI chr10:83,728,348...83,735,562
Ensembl chr10:83,728,318...83,735,705 		JBrowse link
G Olig1 oligodendrocyte transcription factor 1 enables IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr11:30,514,379...30,516,521
Ensembl chr11:30,514,379...30,516,521 		JBrowse link
G Olig2 oligodendrocyte transcription factor 2 enables IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr11:30,475,510...30,478,886
Ensembl chr11:30,475,398...30,480,152 		JBrowse link
G Olig3 oligodendrocyte transcription factor 3 enables IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr 1:14,081,259...14,083,336
Ensembl chr 1:14,081,328...14,082,149 		JBrowse link
G Per1 period circadian regulator 1 enables ISO
IEA		 (PMID:18411297)
GO_REF:0000107		 RGD
Ensembl		 PMID:18411297 GO_REF:0000107 NCBI chr10:53,800,126...53,814,963
Ensembl chr10:53,805,535...53,814,431 		JBrowse link
G Pparg peroxisome proliferator-activated receptor gamma enables ISS
ISO		 GO_REF:0000024
(PMID:19041764)		 UniProt
RGD		 PMID:19041764 GO_REF:0000024 NCBI chr 4:148,423,102...148,548,471
Ensembl chr 4:148,423,194...148,548,468 		JBrowse link
G Prmt5 protein arginine methyltransferase 5 enables ISO (PMID:23133559) RGD PMID:23133559 NCBI chr15:27,968,893...27,978,291
Ensembl chr15:27,968,910...27,978,296 		JBrowse link
G Ptf1a pancreas associated transcription factor 1a enables ISO (PMID:22232429) RGD PMID:22232429 NCBI chr17:82,051,281...82,053,135
Ensembl chr17:82,051,281...82,053,135 		JBrowse link
G Scx scleraxis bHLH transcription factor contributes_to
enables		 ISO (PMID:10775504)
(PMID:19828133)
(PMID:20059955), (PMID:7743923)		 RGD PMID:7743923 PMID:10775504 PMID:19828133 PMID:20059955 NCBI chr 7:108,176,608...108,178,626
Ensembl chr 7:108,176,608...108,178,626 		JBrowse link
G Snai1 snail family transcriptional repressor 1 enables ISO (PMID:11912130) RGD PMID:11912130 NCBI chr 3:156,248,479...156,252,969
Ensembl chr 3:156,248,485...156,252,969 		JBrowse link
G Snai2 snail family transcriptional repressor 2 enables ISO (PMID:11912130), (PMID:15737616), (PMID:16707493) RGD PMID:11912130 PMID:15737616 PMID:16707493 NCBI chr11:86,182,788...86,186,203
Ensembl chr11:86,181,909...86,186,200 		JBrowse link
G Spz1 spermatogenic leucine zipper 1 enables ISO (PMID:30541061) RGD PMID:30541061 NCBI chr 2:23,796,741...23,798,337
Ensembl chr 2:23,796,742...23,798,337 		JBrowse link
G Srebf2 sterol regulatory element binding transcription factor 2 enables IEA
ISO		 GO_REF:0000107
(PMID:15358760)		 Ensembl
RGD		 PMID:15358760 GO_REF:0000107 NCBI chr 7:113,663,202...113,720,850
Ensembl chr 7:113,663,202...113,720,848 		JBrowse link
G Tal1 TAL bHLH transcription factor 1, erythroid differentiation factor enables ISO (PMID:20855495)
(PMID:18550854)		 RGD PMID:18550854 PMID:20855495 NCBI chr 5:128,586,776...128,600,976
Ensembl chr 5:128,587,701...128,600,976 		JBrowse link
G Tcf12 transcription factor 12 enables ISS
ISO		 GO_REF:0000024
(PMID:18214987)		 UniProt
RGD		 PMID:18214987 GO_REF:0000024 NCBI chr 8:72,490,447...72,799,265
Ensembl chr 8:72,492,567...72,799,201 		JBrowse link
G Tcf15 transcription factor 15 enables ISO (PMID:15226298) RGD PMID:15226298 NCBI chr 3:140,638,984...140,644,766
Ensembl chr 3:140,638,984...140,644,766 		JBrowse link
G Tcf21 transcription factor 21 enables ISS
ISO		 GO_REF:0000024
UniProtKB:O35437 (PMID:15919722), (PMID:9545521)		 UniProt
RGD		 PMID:9545521 PMID:15919722 GO_REF:0000024 NCBI chr 1:22,701,353...22,704,212
Ensembl chr 1:22,701,353...22,704,202 		JBrowse link
G Tcf3 transcription factor 3 contributes_to
enables		 IDA
ISO
IEA
ISS		 PMID:19828133
(PMID:11812799)
UniProtKB:O35437 (PMID:15226298), (PMID:18214987), (PMID:30541061), (PMID:9545521)
UniProtKB:Q6QHK4 (PMID:15044608)
GO_REF:0000107
(PMID:10652346), (PMID:7933101)
GO_REF:0000024
(PMID:10775504)		 RGD
Ensembl
UniProt		 PMID:7933101 PMID:9545521 PMID:10652346 PMID:10775504 PMID:11812799 More... GO_REF:0000024 GO_REF:0000107, RGD:8553796 NCBI chr 7:9,280,571...9,302,315
Ensembl chr 7:9,280,571...9,302,314 		JBrowse link
G Tcf4 transcription factor 4 enables ISS
ISO		 GO_REF:0000024
(PMID:18214987), (PMID:8978694)		 UniProt
RGD		 PMID:8978694 PMID:18214987 GO_REF:0000024 NCBI chr18:62,941,739...63,288,126
Ensembl chr18:62,943,782...63,284,425 		JBrowse link
G Tfap4 transcription factor AP-4 enables ISO (PMID:11171123), (PMID:12663744), (PMID:18818310), (PMID:19505873), (PMID:7933101) RGD PMID:7933101 PMID:11171123 PMID:12663744 PMID:18818310 PMID:19505873 NCBI chr10:11,001,338...11,019,386
Ensembl chr10:11,002,911...11,019,386 		JBrowse link
G Tfe3 transcription factor binding to IGHM enhancer 3 enables ISO (PMID:20713358) RGD PMID:20713358 NCBI chr  X:14,729,547...14,742,830
Ensembl chr  X:14,729,550...14,742,571 		JBrowse link
G Twist1 twist family bHLH transcription factor 1 enables ISO (PMID:17332325), (PMID:20804746)
(PMID:16502419), (PMID:20804746), (PMID:24011070)		 RGD PMID:16502419 PMID:17332325 PMID:20804746 PMID:24011070 NCBI chr 6:50,674,910...50,676,904
Ensembl chr 6:50,674,678...50,677,653 		JBrowse link
G Zeb1 zinc finger E-box binding homeobox 1 enables IEA
ISO
ISS		 GO_REF:0000107
(PMID:20346398), (PMID:20713358)
GO_REF:0000024		 Ensembl
RGD
UniProt		 PMID:20346398 PMID:20713358 GO_REF:0000024 GO_REF:0000107 NCBI chr17:51,948,948...52,116,018
Ensembl chr17:51,948,948...52,115,214 		JBrowse link
estrogen response element binding term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ar androgen receptor enables IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr  X:63,104,771...63,273,934
Ensembl chr  X:63,104,771...63,273,925 		JBrowse link
G Esr1 estrogen receptor 1 enables ISO
IBA
IEA		 (PMID:15345745), (PMID:15831516), (PMID:17975005), (PMID:9841876)
GO_REF:0000033
GO_REF:0000107		 RGD
GO_Central
Ensembl		 PMID:9841876 PMID:15345745 PMID:15831516 PMID:17975005 GO_REF:0000033 GO_REF:0000107 NCBI chr 1:41,106,335...41,499,104
Ensembl chr 1:41,210,475...41,495,002 		JBrowse link
G Esr2 estrogen receptor 2 enables IDA
IBA
IEA
ISO		 GO_REF:0000033
GO_REF:0000107
(PMID:15345745), (PMID:19126643)
(PMID:24033289)		 GO_Central
Ensembl
RGD		 PMID:15345745 PMID:19126643 PMID:24033289 PMID:9600083 GO_REF:0000033 GO_REF:0000107, RGD:728646 NCBI chr 6:94,858,438...94,909,630
Ensembl chr 6:94,809,547...94,908,919 		JBrowse link
G Esrra estrogen related receptor, alpha enables IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr 1:204,104,100...204,114,182
Ensembl chr 1:204,104,101...204,114,268 		JBrowse link
G Esrrb estrogen-related receptor beta enables IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr 6:106,007,701...106,163,136
Ensembl chr 6:106,008,095...106,160,791 		JBrowse link
G Esrrg estrogen-related receptor gamma enables IBA
ISO		 GO_REF:0000033
(PMID:10428842)		 GO_Central
RGD		 PMID:10428842 GO_REF:0000033 NCBI chr13:99,167,656...99,788,016
Ensembl chr13:99,564,669...99,783,397 		JBrowse link
G Nr3c1 nuclear receptor subfamily 3, group C, member 1 enables IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr18:31,271,681...31,393,320
Ensembl chr18:31,271,681...31,393,375 		JBrowse link
G Nr3c2 nuclear receptor subfamily 3, group C, member 2 enables IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr19:30,715,634...31,059,885
Ensembl chr19:30,715,648...31,059,885 		JBrowse link
G Nr6a1 nuclear receptor subfamily 6, group A, member 1 enables IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr 3:22,495,109...22,683,132
Ensembl chr 3:22,496,943...22,683,131 		JBrowse link
G Pgr progesterone receptor enables IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr 8:6,072,673...6,131,552
Ensembl chr 8:6,072,673...6,131,344 		JBrowse link
G Trim24 tripartite motif-containing 24 enables ISO (PMID:21164480) RGD PMID:21164480 NCBI chr 4:66,567,342...66,692,029
Ensembl chr 4:66,566,686...66,717,241 		JBrowse link
guanine/thymine mispair binding term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Mlh1 mutL homolog 1 enables IEA
ISO		 GO_REF:0000107
UniProtKB:O00497 (PMID:16713580)		 Ensembl
RGD		 PMID:16713580 GO_REF:0000107 NCBI chr 8:111,196,468...111,233,721
Ensembl chr 8:111,196,468...111,233,617 		JBrowse link
G Msh2 mutS homolog 2 contributes_to
enables		 ISO
IEA		 (PMID:11809883), (PMID:8942985)
(PMID:16713580)
GO_REF:0000107		 RGD
Ensembl		 PMID:8942985 PMID:11809883 PMID:16713580 GO_REF:0000107 NCBI chr 6:6,813,793...6,872,960
Ensembl chr 6:6,813,795...6,872,938 		JBrowse link
G Msh3 mutS homolog 3 NOT|enables ISO (PMID:11809883) RGD PMID:11809883 NCBI chr 2:23,444,326...23,585,777 JBrowse link
G Msh6 mutS homolog 6 contributes_to
enables		 ISO (PMID:11809883), (PMID:8942985)
(PMID:16713580)
(PMID:15324697)		 RGD PMID:8942985 PMID:11809883 PMID:15324697 PMID:16713580 NCBI chr 6:6,562,631...6,579,995
Ensembl chr 6:6,562,632...6,579,956 		JBrowse link
hemi-methylated DNA-binding term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Egr1 early growth response 1 enables IEA
ISO		 GO_REF:0000107
(PMID:25258363)		 Ensembl
RGD		 PMID:25258363 GO_REF:0000107 NCBI chr18:26,462,967...26,466,766
Ensembl chr18:26,462,981...26,466,766 		JBrowse link
G Uhrf1 ubiquitin-like with PHD and ring finger domains 1 enables ISS
ISO
IEA		 GO_REF:0000024
(PMID:17994007)
GO_REF:0000107
(PMID:17673620)		 UniProt
RGD
Ensembl		 PMID:17673620 PMID:17994007 GO_REF:0000024 GO_REF:0000107 NCBI chr 9:1,133,117...1,154,639
Ensembl chr 9:1,134,909...1,154,631 		JBrowse link
G Wt1 WT1 transcription factor enables ISS
IEA
ISO		 GO_REF:0000024
GO_REF:0000107
(PMID:25258363)		 UniProt
Ensembl
RGD		 PMID:25258363 GO_REF:0000024 GO_REF:0000107 NCBI chr 3:91,566,540...91,613,653
Ensembl chr 3:91,567,001...91,613,643 		JBrowse link
intronic transcription regulatory region sequence-specific DNA binding term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Bcl6 BCL6, transcription repressor enables ISO (PMID:24863065) RGD PMID:24863065 NCBI chr11:76,854,090...76,877,389
Ensembl chr11:76,854,090...76,877,389 		JBrowse link
G Grhl2 grainyhead-like transcription factor 2 enables ISO (PMID:20978075) RGD PMID:20978075 NCBI chr 7:68,400,287...68,530,269
Ensembl chr 7:68,400,477...68,530,258 		JBrowse link
G Nkx2-1 NK2 homeobox 1 enables ISS
ISO
IEA		 GO_REF:0000024
(PMID:22955271)
GO_REF:0000107
(PMID:23143308)		 UniProt
RGD
Ensembl		 PMID:22955271 PMID:23143308 GO_REF:0000024 GO_REF:0000107 NCBI chr 6:73,996,601...74,001,483
Ensembl chr 6:73,996,601...73,999,791 		JBrowse link
G Thra thyroid hormone receptor alpha IDA RGD PMID:20368265 RGD:2324624 NCBI chr10:83,701,885...83,729,408
Ensembl chr10:83,700,755...83,729,936 		JBrowse link
left-handed Z-DNA binding term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Zbp1 Z-DNA binding protein 1 enables ISO (PMID:11524677) RGD PMID:11524677 NCBI chr 3:161,993,351...162,009,297
Ensembl chr 3:161,993,351...162,003,870 		JBrowse link
mismatched DNA binding term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Aptx aprataxin enables IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr 5:55,798,896...55,822,963
Ensembl chr 5:55,800,248...55,822,855 		JBrowse link
G Mlh1 mutL homolog 1 enables IEA GO_REF:0000002 InterPro GO_REF:0000002 NCBI chr 8:111,196,468...111,233,721
Ensembl chr 8:111,196,468...111,233,617 		JBrowse link
G Mlh3 mutL homolog 3 enables IEA GO_REF:0000002 InterPro GO_REF:0000002 NCBI chr 6:104,881,483...104,917,686
Ensembl chr 6:104,881,483...104,917,728 		JBrowse link
G Msh2 mutS homolog 2 contributes_to
enables		 ISO
IBA
IEA		 (PMID:11756455), (PMID:11801590), (PMID:8942985)
MGI:1857940|MGI:2680817 (PMID:14744764), (PMID:7550317)
GO_REF:0000033
GO_REF:0000002		 RGD
GO_Central
InterPro		 PMID:7550317 PMID:8942985 PMID:11756455 PMID:11801590 PMID:14744764 GO_REF:0000002 GO_REF:0000033 NCBI chr 6:6,813,793...6,872,960
Ensembl chr 6:6,813,795...6,872,938 		JBrowse link
G Msh3 mutS homolog 3 contributes_to ISO (PMID:8942985) RGD PMID:8942985 NCBI chr 2:23,444,326...23,585,777 JBrowse link
G Msh4 mutS homolog 4 enables IEA GO_REF:0000002 InterPro GO_REF:0000002 NCBI chr 2:242,785,392...242,844,609
Ensembl chr 2:242,792,661...242,843,487 		JBrowse link
G Msh5 mutS homolog 5 enables IEA GO_REF:0000002 InterPro GO_REF:0000002 NCBI chr20:3,773,867...3,793,337
Ensembl chr20:3,776,942...3,793,336 		JBrowse link
G Msh6 mutS homolog 6 contributes_to
enables		 ISO
IBA		 (PMID:11756455), (PMID:11801590), (PMID:8942985)
GO_REF:0000033
(PMID:23622243)		 RGD
GO_Central		 PMID:8942985 PMID:11756455 PMID:11801590 PMID:23622243 GO_REF:0000033 NCBI chr 6:6,562,631...6,579,995
Ensembl chr 6:6,562,632...6,579,956 		JBrowse link
G Pms1 PMS1 homolog 1, mismatch repair system component enables IEA GO_REF:0000002 InterPro GO_REF:0000002 NCBI chr 9:48,229,403...48,340,237
Ensembl chr 9:48,253,410...48,340,237 		JBrowse link
G Tdg thymine-DNA glycosylase enables ISO (PMID:11889051), (PMID:15959518), (PMID:16626738), (PMID:18512959), (PMID:22573813) RGD PMID:11889051 PMID:15959518 PMID:16626738 PMID:18512959 PMID:22573813 NCBI chr 7:21,077,853...21,097,617
Ensembl chr 7:21,077,853...21,097,567 		JBrowse link
mitochondrial promoter sequence-specific DNA binding term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Lonp1 lon peptidase 1, mitochondrial NOT|enables ISO (PMID:9485316)
(PMID:12657466)		 RGD PMID:9485316 PMID:12657466 NCBI chr 9:1,447,444...1,459,771
Ensembl chr 9:1,447,447...1,459,771 		JBrowse link
G Polrmt RNA polymerase mitochondrial enables IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr 7:9,959,532...9,969,791
Ensembl chr 7:9,959,576...9,969,791 		JBrowse link
G Tfam transcription factor A, mitochondrial enables ISO
ISS		 (PMID:19304746)
(PMID:2628167)
GO_REF:0000024		 RGD
UniProt		 PMID:2628167 PMID:19304746 GO_REF:0000024 NCBI chr20:17,356,243...17,368,293
Ensembl chr20:17,356,197...17,368,292 		JBrowse link
N-box binding term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Hes1 hes family bHLH transcription factor 1 enables IDA
ISO
IBA
ISS
IEA		 (PMID:10851137), (PMID:17681138)
GO_REF:0000033
GO_REF:0000024
GO_REF:0000107		 RGD
GO_Central
UniProt
Ensembl		 PMID:10851137 PMID:17681138 PMID:22302822 GO_REF:0000024 GO_REF:0000033 GO_REF:0000107, RGD:9685391 NCBI chr11:70,705,763...70,708,176
Ensembl chr11:70,705,764...70,708,192 		JBrowse link
promoter-enhancer loop anchoring activity term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ahdc1 AT hook, DNA binding motif, containing 1 enables ISO (PMID:35585237) RGD PMID:35585237 NCBI chr 5:145,228,228...145,294,170
Ensembl chr 5:145,228,227...145,294,145 		JBrowse link
G Msl2 MSL complex subunit 2 enables ISO (PMID:38030723) RGD PMID:38030723 NCBI chr 8:101,676,605...101,702,818
Ensembl chr 8:101,676,765...101,763,833 		JBrowse link
G Pcbp2 poly(rC) binding protein 2 enables ISO (PMID:31361039) RGD PMID:31361039 NCBI chr 7:133,605,375...133,631,312
Ensembl chr 7:133,605,573...133,629,863 		JBrowse link
G Ruvbl2 RuvB-like AAA ATPase 2 enables ISO (PMID:23637611) RGD PMID:23637611 NCBI chr 1:95,902,014...95,915,247
Ensembl chr 1:95,901,701...95,915,342 		JBrowse link
purine-rich negative regulatory element binding term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Elk3 ETS transcription factor ELK3 enables ISO (PMID:12933792) RGD PMID:12933792 NCBI chr 7:27,768,582...27,831,088
Ensembl chr 7:27,768,599...27,804,084 		JBrowse link
G Pura purine rich element binding protein A enables ISO
IEA		 (PMID:12933792)
GO_REF:0000107		 RGD
Ensembl		 PMID:12933792 GO_REF:0000107 NCBI chr18:27,885,071...27,905,509
Ensembl chr18:27,884,556...27,905,513 		JBrowse link
G Purb purine rich element binding protein B enables IDA
IBA
IEA		 PMID:12933792
GO_REF:0000033
GO_REF:0000002		 GO_Central
InterPro		 PMID:12933792 GO_REF:0000002 GO_REF:0000033, RGD:1581942 NCBI chr14:81,342,374...81,344,857
Ensembl chr14:81,336,448...81,351,432 		JBrowse link
G Purg purine-rich element binding protein G enables IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr16:58,732,327...58,763,356
Ensembl chr16:58,720,335...58,763,359 		JBrowse link
rDNA binding term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Alkbh2 alkB homolog 2, alpha-ketoglutarate-dependent dioxygenase enables ISO (PMID:23972994) RGD PMID:23972994 NCBI chr12:42,494,187...42,500,929
Ensembl chr12:42,496,300...42,500,914 		JBrowse link
G Bend3 BEN domain containing 3 enables ISO
IBA		 (PMID:26100909)
GO_REF:0000033		 RGD
GO_Central		 PMID:26100909 GO_REF:0000033 NCBI chr20:46,980,246...47,017,059
Ensembl chr20:46,979,831...47,014,671 		JBrowse link
G Bnc1 basonuclin zinc finger protein 1 enables ISO (PMID:10449744), (PMID:11152639) RGD PMID:10449744 PMID:11152639 NCBI chr 1:135,917,676...135,943,333
Ensembl chr 1:135,917,687...135,943,333 		JBrowse link
G Bnc2 basonuclin zinc finger protein 2 enables ISO (PMID:15081112) RGD PMID:15081112 NCBI chr 5:98,679,071...99,016,044
Ensembl chr 5:98,687,410...99,079,426 		JBrowse link
G Dhx33 DEAH-box helicase 33 enables ISO (PMID:21930779) RGD PMID:21930779 NCBI chr10:55,708,102...55,724,618
Ensembl chr10:55,705,756...55,724,567 		JBrowse link
G Macroh2a1 macroH2A.1 histone enables ISO (PMID:24071584) RGD PMID:24071584 NCBI chr17:8,479,331...8,542,071
Ensembl chr17:8,479,372...8,542,072 		JBrowse link
retinoic acid-responsive element binding term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Myt1l myelin transcription factor 1-like enables IDA
IMP		 PMID:10606515 RGD
CAFA		 PMID:8631881 PMID:10606515 RGD:633486, RGD:12793025 NCBI chr 6:46,164,742...46,564,234
Ensembl chr 6:46,428,150...46,561,671 		JBrowse link
G Nr2f1 nuclear receptor subfamily 2, group F, member 1 IDA RGD PMID:7797489 RGD:633499 NCBI chr 2:8,040,375...8,050,123
Ensembl chr 2:8,040,377...8,050,123 		JBrowse link
G Rara retinoic acid receptor, alpha enables ISO (PMID:19917671) RGD PMID:19917671 NCBI chr10:83,883,490...83,928,932
Ensembl chr10:83,893,384...83,928,142 		JBrowse link
G Rxra retinoid X receptor alpha enables ISO
IBA
IEA		 (PMID:19917671), (PMID:25592151)
GO_REF:0000033
GO_REF:0000107		 RGD
GO_Central
Ensembl		 PMID:19917671 PMID:25592151 GO_REF:0000033 GO_REF:0000107 NCBI chr 3:10,989,832...11,076,366
Ensembl chr 3:10,989,832...11,073,712 		JBrowse link
G Rxrb retinoid X receptor beta enables IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr20:4,816,813...4,823,267
Ensembl chr20:4,816,815...4,828,773 		JBrowse link
G Rxrg retinoid X receptor gamma enables IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr13:79,743,430...79,785,173
Ensembl chr13:79,743,563...79,785,167 		JBrowse link
G Zfp536 zinc finger protein 536 enables ISO (PMID:19398580) RGD PMID:19398580 NCBI chr 1:90,000,359...90,463,423
Ensembl chr 1:90,002,858...90,462,990 		JBrowse link
RNA polymerase I cis-regulatory region sequence-specific DNA binding term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Pih1d1 PIH1 domain containing 1 NOT|enables ISO (PMID:22368283) RGD PMID:22368283 NCBI chr 1:95,639,597...95,645,295
Ensembl chr 1:95,639,592...95,645,290 		JBrowse link
G Ubtf upstream binding transcription factor enables ISO (PMID:22368283) RGD PMID:22368283 NCBI chr10:87,258,217...87,274,291
Ensembl chr10:87,258,217...87,272,969 		JBrowse link
RNA polymerase I core promoter sequence-specific DNA binding term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Baz2a bromodomain adjacent to zinc finger domain, 2A contributes_to ISO (PMID:22368283) RGD PMID:22368283 NCBI chr 7:523,204...560,911
Ensembl chr 7:523,265...560,659 		JBrowse link
G Rrn3 RRN3 homolog, RNA polymerase I transcription factor enables ISO (PMID:22368283) RGD PMID:22368283 NCBI chr10:2,129,949...2,165,381
Ensembl chr10:2,129,978...2,165,663 		JBrowse link
G Smarca4 SWI/SNF related BAF chromatin remodeling complex subunit ATPase 4 contributes_to
enables		 ISO
IEA		 (PMID:22368283)
GO_REF:0000107		 RGD
Ensembl		 PMID:22368283 GO_REF:0000107 NCBI chr 8:20,167,717...20,258,975
Ensembl chr 8:20,167,717...20,258,975 		JBrowse link
G Smarcb1 SWI/SNF related BAF chromatin remodeling complex subunit B1 contributes_to ISO (PMID:22368283) RGD PMID:22368283 NCBI chr20:12,741,164...12,763,616
Ensembl chr20:12,741,477...12,763,620 		JBrowse link
G Taf1b TATA-box binding protein associated factor, RNA polymerase I subunit B enables ISS
IBA
IEA
ISO		 GO_REF:0000024
GO_REF:0000033
GO_REF:0000107
(PMID:21921198), (PMID:21921199)		 UniProt
GO_Central
Ensembl
RGD		 PMID:21921198 PMID:21921199 GO_REF:0000024 GO_REF:0000033 GO_REF:0000107 NCBI chr 6:41,116,980...41,194,593
Ensembl chr 6:41,117,420...41,194,593 		JBrowse link
G Taf1c TATA-box binding protein associated factor, RNA polymerase 1 subunit C enables ISO
IBA		 (PMID:22368283)
GO_REF:0000033		 RGD
GO_Central		 PMID:22368283 GO_REF:0000033 NCBI chr19:47,652,451...47,658,971
Ensembl chr19:47,652,452...47,658,971 		JBrowse link
G Tbp TATA box binding protein enables ISO (PMID:11250903) RGD PMID:11250903 NCBI chr 1:56,463,330...56,480,430
Ensembl chr 1:56,463,618...56,510,016 		JBrowse link
G Ubtf upstream binding transcription factor enables ISO
IBA		 (PMID:22368283)
GO_REF:0000033		 RGD
GO_Central		 PMID:22368283 GO_REF:0000033 NCBI chr10:87,258,217...87,274,291
Ensembl chr10:87,258,217...87,272,969 		JBrowse link
RNA polymerase I transcription regulatory region sequence-specific DNA binding term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Cebpa CCAAT/enhancer binding protein alpha enables ISO
ISS		 (PMID:20075868)
GO_REF:0000024		 RGD
UniProt		 PMID:20075868 GO_REF:0000024 NCBI chr 1:87,759,631...87,762,303
Ensembl chr 1:87,759,433...87,762,412 		JBrowse link
RNA polymerase II cis-regulatory region sequence-specific DNA binding term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G AABR07001923.1 enables IBA GO_REF:0000033 GO_Central GO_REF:0000033 Ensembl chr 1:61,789,774...61,868,888 JBrowse link
G AABR07049728.1 enables IBA GO_REF:0000033 GO_Central GO_REF:0000033 Ensembl chr 5:131,226,562...131,229,441 JBrowse link
G Ago1 argonaute RISC component 1 enables ISO (PMID:22053081) RGD PMID:22053081 NCBI chr 5:138,722,111...138,757,118
Ensembl chr 5:138,722,111...138,773,546 		JBrowse link
G App amyloid beta precursor protein enables IEA
ISO		 GO_REF:0000107
(PMID:15944124)		 Ensembl
RGD		 PMID:15944124 GO_REF:0000107 NCBI chr11:24,019,774...24,236,584
Ensembl chr11:24,019,778...24,236,561 		JBrowse link
G Ar androgen receptor enables ISO
IEA		 (PMID:16728402), (PMID:25802280)
GO_REF:0000107		 RGD
Ensembl		 PMID:16728402 PMID:25802280 GO_REF:0000107 NCBI chr  X:63,104,771...63,273,934
Ensembl chr  X:63,104,771...63,273,925 		JBrowse link
G Arnt aryl hydrocarbon receptor nuclear translocator enables IEA
ISO
IBA		 GO_REF:0000107
MGI:106918|MGI:109169|UniProtKB:Q99814 (PMID:9000051), (PMID:9113979)
GO_REF:0000033		 Ensembl
RGD
GO_Central		 PMID:9000051 PMID:9113979 GO_REF:0000033 GO_REF:0000107 NCBI chr 2:182,997,731...183,056,584
Ensembl chr 2:182,997,736...183,056,580 		JBrowse link
G Arnt2 aryl hydrocarbon receptor nuclear translocator 2 enables IBA
ISO		 GO_REF:0000033
(PMID:14701734), (PMID:8657146)		 GO_Central
RGD		 PMID:8657146 PMID:14701734 GO_REF:0000033 NCBI chr 1:138,236,235...138,392,868
Ensembl chr 1:138,189,940...138,393,153 		JBrowse link
G Arx aristaless related homeobox enables IEA
ISO		 GO_REF:0000107
(PMID:15930104)
(PMID:22194193), (PMID:31691806)		 Ensembl
RGD		 PMID:15930104 PMID:22194193 PMID:31691806 GO_REF:0000107 NCBI chr  X:58,016,233...58,028,149
Ensembl chr  X:58,016,233...58,028,142 		JBrowse link
G Ascl1 achaete-scute family bHLH transcription factor 1 enables ISO (PMID:11736660) RGD PMID:11736660 NCBI chr 7:21,903,136...21,906,003
Ensembl chr 7:21,903,126...21,905,993 		JBrowse link
G Ascl2 achaete-scute family bHLH transcription factor 2 enables ISO (PMID:14561729) RGD PMID:14561729 NCBI chr 1:198,148,999...198,151,406
Ensembl chr 1:198,148,999...198,151,406 		JBrowse link
G Ascl5 achaete-scute family bHLH transcription factor 5 enables ISO (PMID:30426815) RGD PMID:30426815 NCBI chr13:47,491,799...47,493,269
Ensembl chr13:47,492,026...47,492,592 		JBrowse link
G Atf1 activating transcription factor 1 enables IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr 7:131,361,962...131,404,677
Ensembl chr 7:131,362,450...131,404,670 		JBrowse link
G Atf2 activating transcription factor 2 enables ISO (PMID:19861239)
(PMID:16405968)		 RGD PMID:16405968 PMID:19861239 NCBI chr 3:58,718,323...58,795,280
Ensembl chr 3:58,718,332...58,795,236 		JBrowse link
G Atf3 activating transcription factor 3 enables IDA
IBA
ISO		 PMID:18308734
GO_REF:0000033
(PMID:16644691)		 GO_Central
RGD		 PMID:16644691 PMID:18308734 GO_REF:0000033, RGD:39458028 NCBI chr13:102,751,278...102,800,520
Ensembl chr13:102,751,321...102,764,631 		JBrowse link
G Atf4 activating transcription factor 4 enables
contributes_to		 ISS
ISO		 GO_REF:0000024
(PMID:12749859), (PMID:15724149), (PMID:15788408), (PMID:21768648), (PMID:27812542)
(PMID:27812542)		 UniProt
RGD		 PMID:12749859 PMID:15724149 PMID:15788408 PMID:21768648 PMID:27812542 GO_REF:0000024 NCBI chr 7:111,804,135...111,806,457
Ensembl chr 7:111,804,183...111,806,446 		JBrowse link
G Atf6 activating transcription factor 6 enables ISO
IBA
IEA		 (PMID:24269637)
GO_REF:0000033
GO_REF:0000107		 RGD
GO_Central
Ensembl		 PMID:24269637 GO_REF:0000033 GO_REF:0000107 NCBI chr13:82,927,579...83,106,381
Ensembl chr13:82,930,034...83,107,177 		JBrowse link
G Atf6b activating transcription factor 6 beta contributes_to
enables		 ISO
IBA		 (PMID:11256944)
GO_REF:0000033		 RGD
GO_Central		 PMID:11256944 GO_REF:0000033 NCBI chr20:4,090,921...4,098,920
Ensembl chr20:4,090,921...4,098,894 		JBrowse link
G Atf7 activating transcription factor 7 enables ISO (PMID:8288576) RGD PMID:8288576 NCBI chr 7:133,660,491...133,750,902
Ensembl chr 7:133,663,294...133,750,848 		JBrowse link
G Atoh1 atonal bHLH transcription factor 1 enables ISO (PMID:17826772) RGD PMID:17826772 NCBI chr 4:93,912,068...93,914,163
Ensembl chr 4:93,912,068...93,914,154 		JBrowse link
G Bach1 BTB domain and CNC homolog 1 enables IBA
ISO		 GO_REF:0000033
(PMID:8887638)		 GO_Central
RGD		 PMID:8887638 GO_REF:0000033 NCBI chr11:26,939,429...26,974,876
Ensembl chr11:26,939,480...26,972,447 		JBrowse link
G Bach2 BTB domain and CNC homolog 2 enables IBA
ISO		 GO_REF:0000033
(PMID:8887638)		 GO_Central
RGD		 PMID:8887638 GO_REF:0000033 NCBI chr 5:46,632,338...46,982,676
Ensembl chr 5:46,638,317...46,977,877 		JBrowse link
G Batf basic leucine zipper ATF-like transcription factor enables ISO
IBA		 (PMID:22983707)
GO_REF:0000033		 RGD
GO_Central		 PMID:22983707 GO_REF:0000033 NCBI chr 6:105,353,715...105,376,051
Ensembl chr 6:105,353,715...105,376,051 		JBrowse link
G Batf2 basic leucine zipper ATF-like transcription factor 2 enables IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr 1:203,467,291...203,479,428
Ensembl chr 1:203,468,097...203,475,889 		JBrowse link
G Batf3 basic leucine zipper ATF-like transcription factor 3 enables IEA
IBA
ISO		 GO_REF:0000107
GO_REF:0000033
(PMID:15467742)		 Ensembl
GO_Central
RGD		 PMID:15467742 GO_REF:0000033 GO_REF:0000107 NCBI chr13:102,689,657...102,701,241
Ensembl chr13:102,689,657...102,701,139 		JBrowse link
G Bcl11a BCL11 transcription factor A enables ISO
IBA		 (PMID:19153051)
GO_REF:0000033		 RGD
GO_Central		 PMID:19153051 GO_REF:0000033 NCBI chr14:98,029,018...98,124,181
Ensembl chr14:98,030,461...98,124,180 		JBrowse link
G Bcl11b BCL11 transcription factor B enables ISO
IBA		 (PMID:16809611)
GO_REF:0000033		 RGD
GO_Central		 PMID:16809611 GO_REF:0000033 NCBI chr 6:126,834,531...126,927,720
Ensembl chr 6:126,834,531...126,928,224 		JBrowse link
G Bcl6 BCL6, transcription repressor enables IBA
ISO		 GO_REF:0000033
(PMID:10490661), (PMID:15611242), (PMID:9110977)		 GO_Central
RGD		 PMID:9110977 PMID:10490661 PMID:15611242 GO_REF:0000033 NCBI chr11:76,854,090...76,877,389
Ensembl chr11:76,854,090...76,877,389 		JBrowse link
G Bcl6b BCL6B, transcription repressor enables IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr10:54,940,908...54,947,022
Ensembl chr10:54,940,909...54,945,974 		JBrowse link
G Bhlhe40 basic helix-loop-helix family, member e40 enables IBA
ISO		 GO_REF:0000033
(PMID:15147242)		 GO_Central
RGD		 PMID:15147242 GO_REF:0000033 NCBI chr 4:141,618,453...141,624,154
Ensembl chr 4:141,618,476...141,624,774 		JBrowse link
G Bhlhe41 basic helix-loop-helix family, member e41 enables IBA
ISO		 GO_REF:0000033
(PMID:12657651), (PMID:15147242)		 GO_Central
RGD		 PMID:12657651 PMID:15147242 GO_REF:0000033 NCBI chr 4:178,834,264...178,838,618
Ensembl chr 4:178,834,271...178,838,468 		JBrowse link
G Bmal1 basic helix-loop-helix ARNT like 1 enables ISS
ISO
IBA		 GO_REF:0000024
(PMID:15147242), (PMID:21113167), (PMID:21768648), (PMID:22894897), (PMID:24043798), (PMID:24051492), (PMID:24089055), (PMID:24385426)
GO_REF:0000033		 UniProt
RGD
GO_Central		 PMID:15147242 PMID:21113167 PMID:21768648 PMID:22894897 PMID:24043798 More... GO_REF:0000024 GO_REF:0000033 NCBI chr 1:167,331,756...167,430,235
Ensembl chr 1:167,331,633...167,430,231 		JBrowse link
G Bmal2 basic helix-loop-helix ARNT like 2 enables ISO
IBA		 (PMID:15147242)
GO_REF:0000033		 RGD
GO_Central		 PMID:15147242 GO_REF:0000033 NCBI chr 4:179,699,432...179,747,710
Ensembl chr 4:179,699,502...179,746,949 		JBrowse link
G Bptf bromodomain PHD finger transcription factor enables IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr10:91,980,279...92,082,731
Ensembl chr10:91,982,758...92,082,769 		JBrowse link
G Bsx brain specific homeobox enables IBA
ISO		 GO_REF:0000033
(PMID:17353277)		 GO_Central
RGD		 PMID:17353277 GO_REF:0000033 NCBI chr 8:41,254,105...41,257,861
Ensembl chr 8:41,254,105...41,257,861 		JBrowse link
G Calcoco1 calcium binding and coiled coil domain 1 enables ISO
IEA
ISS		 (PMID:24245781)
GO_REF:0000107
GO_REF:0000024		 RGD
Ensembl
UniProt		 PMID:24245781 GO_REF:0000024 GO_REF:0000107 NCBI chr 7:133,834,705...133,849,515
Ensembl chr 7:133,834,707...133,849,422 		JBrowse link
G Carf calcium responsive transcription factor enables IEA
ISO
IBA		 GO_REF:0000107
(PMID:11832226)
GO_REF:0000033		 Ensembl
RGD
GO_Central		 PMID:11832226 GO_REF:0000033 GO_REF:0000107 NCBI chr 9:61,502,368...61,552,433
Ensembl chr 9:61,506,956...61,550,462 		JBrowse link
G Cc2d1a coiled-coil and C2 domain containing 1A enables ISO
IBA
IEA		 (PMID:12917378)
(PMID:21155902)
GO_REF:0000033
GO_REF:0000107		 RGD
GO_Central
Ensembl		 PMID:12917378 PMID:21155902 GO_REF:0000033 GO_REF:0000107 NCBI chr19:24,011,897...24,026,937
Ensembl chr19:24,011,938...24,026,936 		JBrowse link
G Cc2d1b coiled-coil and C2 domain containing 1B enables IBA
ISO		 GO_REF:0000033
(PMID:21155902)		 GO_Central
RGD		 PMID:21155902 GO_REF:0000033 NCBI chr 5:123,353,289...123,367,343
Ensembl chr 5:123,353,292...123,367,318 		JBrowse link
G Ccar1 cell division cycle and apoptosis regulator 1 enables ISO (PMID:24245781) RGD PMID:24245781 NCBI chr20:30,685,916...30,728,531
Ensembl chr20:30,685,916...30,728,526 		JBrowse link
G Cdk9 cyclin-dependent kinase 9 enables ISO (PMID:21245044) RGD PMID:21245044 NCBI chr 3:15,996,467...16,001,315
Ensembl chr 3:15,996,468...16,002,410 		JBrowse link
G Cdx1 caudal type homeo box 1 enables ISO
IEA		 (PMID:15774940)
GO_REF:0000107		 RGD
Ensembl		 PMID:15774940 GO_REF:0000107 NCBI chr18:54,472,587...54,490,913
Ensembl chr18:54,473,444...54,490,814 		JBrowse link
G Cdx2 caudal type homeo box 2 enables ISO (PMID:15677472)
(PMID:9512360), (PMID:9933478)		 RGD PMID:9512360 PMID:9933478 PMID:15677472 NCBI chr12:7,726,798...7,733,142
Ensembl chr12:7,726,798...7,733,142 		JBrowse link
G Cdx4 caudal type homeo box 4 enables ISO (PMID:21471217) RGD PMID:21471217 NCBI chr  X:68,326,874...68,335,461
Ensembl chr  X:68,326,874...68,335,461 		JBrowse link
G Cebpa CCAAT/enhancer binding protein alpha enables IDA
IBA
ISO		 PMID:8572170
GO_REF:0000033
(PMID:10233885)		 GO_Central
RGD		 PMID:10233885 PMID:8572170 GO_REF:0000033, RGD:8661634 NCBI chr 1:87,759,631...87,762,303
Ensembl chr 1:87,759,433...87,762,412 		JBrowse link
G Cebpb CCAAT/enhancer binding protein beta enables
contributes_to		 IDA
IBA
ISO
IEA		 PMID:8572170
GO_REF:0000033
(PMID:27812542)
GO_REF:0000107		 GO_Central
RGD
Ensembl		 PMID:27812542 PMID:8572170 GO_REF:0000033 GO_REF:0000107, RGD:8661634 NCBI chr 3:156,398,035...156,399,466
Ensembl chr 3:156,397,052...156,399,473 		JBrowse link
G Cebpd CCAAT/enhancer binding protein delta enables IDA
IBA
ISO		 PMID:8572170
GO_REF:0000033
(PMID:15833715)		 GO_Central
RGD		 PMID:15833715 PMID:8572170 GO_REF:0000033, RGD:8661634 NCBI chr11:84,764,670...84,765,808
Ensembl chr11:84,764,565...84,765,829 		JBrowse link
G Cebpe CCAAT/enhancer binding protein epsilon enables ISO
IBA		 (PMID:10233885)
GO_REF:0000033		 RGD
GO_Central		 PMID:10233885 GO_REF:0000033 NCBI chr15:28,169,711...28,171,471
Ensembl chr15:28,169,704...28,171,814 		JBrowse link
G Cebpg CCAAT/enhancer binding protein gamma enables ISO
IBA		 (PMID:15833715)
GO_REF:0000033		 RGD
GO_Central		 PMID:15833715 GO_REF:0000033 NCBI chr 1:87,683,060...87,692,772
Ensembl chr 1:87,684,019...87,694,569 		JBrowse link
G Chd2 chromodomain helicase DNA binding protein 2 enables ISO (PMID:22569126) RGD PMID:22569126 NCBI chr 1:127,188,146...127,317,041
Ensembl chr 1:127,190,059...127,300,502 		JBrowse link
G Chd7 chromodomain helicase DNA binding protein 7 enables ISO (PMID:23319608) RGD PMID:23319608 NCBI chr 5:21,812,007...21,995,358
Ensembl chr 5:21,812,070...21,995,358 		JBrowse link
G Ciart circadian associated repressor of transcription enables IBA
ISO		 GO_REF:0000033
(PMID:24385426)		 GO_Central
RGD		 PMID:24385426 GO_REF:0000033 NCBI chr 2:183,419,819...183,424,845
Ensembl chr 2:183,419,819...183,423,313 		JBrowse link
G Clock clock circadian regulator enables ISO
ISS		 (PMID:18411297)
(PMID:15147242), (PMID:19299583), (PMID:21113167), (PMID:21768648), (PMID:22894897), (PMID:24043798), (PMID:24051492), (PMID:24089055), (PMID:24385426)
GO_REF:0000024		 RGD
UniProt		 PMID:15147242 PMID:18411297 PMID:19299583 PMID:21113167 PMID:21768648 More... GO_REF:0000024 NCBI chr14:31,908,542...31,992,673
Ensembl chr14:31,908,566...31,990,400 		JBrowse link
G Cphx1 cytoplasmic polyadenylated homeobox 1 enables IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr16:1,533,883...1,537,248
Ensembl chr16:1,528,440...1,537,082 		JBrowse link
G Creb1 cAMP responsive element binding protein 1 enables ISO (PMID:19861239), (PMID:9065434) RGD PMID:9065434 PMID:19861239 NCBI chr 9:65,903,511...65,972,562
Ensembl chr 9:65,903,547...65,970,816 		JBrowse link
G Creb3 cAMP responsive element binding protein 3 enables ISO
IBA		 (PMID:16940180)
GO_REF:0000033		 RGD
GO_Central		 PMID:16940180 GO_REF:0000033 NCBI chr 5:57,817,865...57,823,233
Ensembl chr 5:57,817,832...57,824,390 		JBrowse link
G Creb3l2 cAMP responsive element binding protein 3-like 2 enables ISO (PMID:17178827) RGD PMID:17178827 NCBI chr 4:65,907,570...66,112,078
Ensembl chr 4:65,907,655...66,023,763 		JBrowse link
G Creb3l3 cAMP responsive element binding protein 3-like 3 enables IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr 7:8,622,614...8,631,053
Ensembl chr 7:8,622,614...8,631,048 		JBrowse link
G Creb3l4 cAMP responsive element binding protein 3-like 4 enables IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr 2:175,690,340...175,695,846
Ensembl chr 2:175,690,335...175,695,932 		JBrowse link
G Crem cAMP responsive element modulator enables IBA
ISO		 GO_REF:0000033
(PMID:23443664)		 GO_Central
RGD		 PMID:23443664 GO_REF:0000033 NCBI chr17:54,238,889...54,305,989
Ensembl chr17:54,239,030...54,305,989 		JBrowse link
G Crx cone-rod homeobox enables ISO
IBA		 (PMID:10625658)
GO_REF:0000033		 RGD
GO_Central		 PMID:10625658 GO_REF:0000033 NCBI chr 1:76,539,812...76,553,694
Ensembl chr 1:76,540,141...76,545,818 		JBrowse link
G Ctcf CCCTC-binding factor enables ISO
IBA
IEA		 (PMID:8649389)
GO_REF:0000033
GO_REF:0000107		 RGD
GO_Central
Ensembl		 PMID:8649389 GO_REF:0000033 GO_REF:0000107 NCBI chr19:33,521,726...33,571,124
Ensembl chr19:33,529,319...33,571,123 		JBrowse link
G Ctcfl1 CCCTC-binding factor like 1 enables ISO (PMID:16140944) RGD PMID:16140944 NCBI chr 3:161,868,306...161,890,949
Ensembl chr 3:161,868,306...161,890,949 		JBrowse link
G Cux1 cut-like homeobox 1 enables ISO (PMID:18836447) RGD PMID:18836447 NCBI chr12:20,107,062...20,425,868
Ensembl chr12:20,107,311...20,425,866 		JBrowse link
G Cux2 cut-like homeobox 2 enables ISO (PMID:15656993) RGD PMID:15656993 NCBI chr12:34,507,723...34,707,581
Ensembl chr12:34,520,959...34,705,806 		JBrowse link
G Dach1 dachshund family transcription factor 1 enables ISO
IBA		 (PMID:20956529)
GO_REF:0000033		 RGD
GO_Central		 PMID:20956529 GO_REF:0000033 NCBI chr15:74,528,122...74,909,811
Ensembl chr15:74,529,208...74,909,922 		JBrowse link
G Dbp D-box binding PAR bZIP transcription factor enables IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr 1:96,175,796...96,180,745
Ensembl chr 1:96,175,440...96,180,745 		JBrowse link
G Ddit3 DNA-damage inducible transcript 3 enables ISO
IBA
IEA		 (PMID:22065586)
GO_REF:0000033
GO_REF:0000107		 RGD
GO_Central
Ensembl		 PMID:22065586 GO_REF:0000033 GO_REF:0000107 NCBI chr 7:63,115,645...63,121,203
Ensembl chr 7:63,116,380...63,121,201 		JBrowse link
G Ddn dendrin enables IDA PMID:21911934 MGI PMID:21911934 RGD:8554331 NCBI chr 7:129,953,317...129,957,299
Ensembl chr 7:129,953,318...129,957,341 		JBrowse link
G Dhx36 DEAH-box helicase 36 enables ISO
ISS		 (PMID:21586581), (PMID:21993297)
(PMID:25611385)
GO_REF:0000024		 RGD
UniProt		 PMID:21586581 PMID:21993297 PMID:25611385 GO_REF:0000024 NCBI chr 2:146,856,469...146,894,577
Ensembl chr 2:146,856,469...146,894,572 		JBrowse link
G Dhx9 DExH-box helicase 9 enables ISO (PMID:11038348) RGD PMID:11038348 NCBI chr13:65,602,322...65,639,098
Ensembl chr13:65,602,323...65,639,069 		JBrowse link
G Dlx3 distal-less homeobox 3 enables IBA
ISO		 GO_REF:0000033
(PMID:18684741)		 GO_Central
RGD		 PMID:18684741 GO_REF:0000033 NCBI chr10:80,064,489...80,069,891
Ensembl chr10:80,064,489...80,069,872 		JBrowse link
G Dlx4 distal-less homeobox 4 enables ISO
IBA		 (PMID:11909945)
GO_REF:0000033		 RGD
GO_Central		 PMID:11909945 GO_REF:0000033 NCBI chr10:80,085,037...80,090,434
Ensembl chr10:80,085,465...80,090,456 		JBrowse link
G Dlx5 distal-less homeobox 5 enables IEA
ISO
IBA		 GO_REF:0000107
(PMID:20843790)
GO_REF:0000033		 Ensembl
RGD
GO_Central		 PMID:20843790 GO_REF:0000033 GO_REF:0000107 NCBI chr 4:34,999,139...35,003,504
Ensembl chr 4:34,999,139...35,003,407 		JBrowse link
G Dmrt1 doublesex and mab-3 related transcription factor 1 enables IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr 1:223,142,859...223,241,333
Ensembl chr 1:223,142,859...223,241,333 		JBrowse link
G Dmrt2 doublesex and mab-3 related transcription factor 2 enables IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr 1:223,317,543...223,324,131
Ensembl chr 1:223,317,642...223,324,131 		JBrowse link
G Dmrt3 doublesex and mab-3 related transcription factor 3 enables IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr 1:223,244,340...223,264,254
Ensembl chr 1:223,248,747...223,262,530 		JBrowse link
G Dmrta1 DMRT-like family A1 enables IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr 5:104,415,893...104,422,433
Ensembl chr 5:104,415,893...104,422,433 		JBrowse link
G Dmrta2 DMRT-like family A2 enables IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr 5:124,805,883...124,811,694
Ensembl chr 5:124,805,883...124,811,630 		JBrowse link
G Dmrtb1 DMRT-like family B with proline-rich C-terminal, 1 enables IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr 5:122,444,853...122,452,483
Ensembl chr 5:122,444,841...122,452,396 		JBrowse link
G Dmrtc1a DMRT-like family C1a NOT|enables IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr  X:67,822,187...67,852,572
Ensembl chr  X:67,822,113...67,852,571 		JBrowse link
G Dmrtc1c1 DMRT-like family C1c1 NOT|enables IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr  X:67,896,973...67,904,182
Ensembl chr  X:67,896,974...67,904,182 		JBrowse link
G Dmrtc2 DMRT-like family C2 NOT|enables IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr 1:80,466,259...80,473,883
Ensembl chr 1:80,466,132...80,473,531 		JBrowse link
G Dmtf1 cyclin D binding myb-like transcription factor 1 enables IBA
ISO		 GO_REF:0000033
(PMID:19816943)		 GO_Central
RGD		 PMID:19816943 GO_REF:0000033 NCBI chr 4:24,909,937...24,950,786
Ensembl chr 4:24,910,534...24,950,967 		JBrowse link
G Dmtf1l2 cyclin D binding myb like transcription factor 1 like 2 enables IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr  X:89,737,715...89,781,873
Ensembl chr  X:89,737,134...89,781,886 		JBrowse link
G Dnmt3a DNA methyltransferase 3 alpha enables ISO (PMID:19786833), (PMID:23042785) RGD PMID:19786833 PMID:23042785 NCBI chr 6:26,791,517...26,902,161
Ensembl chr 6:26,822,609...26,896,687 		JBrowse link
G Dux4 double homeobox 4 enables ISO (PMID:17984056) RGD PMID:17984056 NCBI chr16:1,558,430...1,570,045
Ensembl chr16:1,558,766...1,568,565 		JBrowse link
G E2f1 E2F transcription factor 1 enables IEA
IBA		 GO_REF:0000002
GO_REF:0000033		 InterPro
GO_Central		 GO_REF:0000002 GO_REF:0000033 NCBI chr 3:143,064,535...143,075,362
Ensembl chr 3:143,049,478...143,075,361 		JBrowse link
G E2f2 E2F transcription factor 2 enables IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr 5:148,399,193...148,422,595
Ensembl chr 5:148,399,642...148,421,217 		JBrowse link
G E2f3 E2F transcription factor 3 enables IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr17:34,601,756...34,679,139
Ensembl chr17:34,601,830...34,676,253 		JBrowse link
G E2f4 E2F transcription factor 4 enables ISO
IBA		 (PMID:10488129)
(PMID:11004506)
GO_REF:0000033		 RGD
GO_Central		 PMID:10488129 PMID:11004506 GO_REF:0000033 NCBI chr19:33,174,396...33,181,806
Ensembl chr19:33,174,410...33,181,806 		JBrowse link
G E2f5 E2F transcription factor 5 enables IEA
IBA		 GO_REF:0000002
GO_REF:0000033		 InterPro
GO_Central		 GO_REF:0000002 GO_REF:0000033 NCBI chr 2:86,997,331...87,012,908
Ensembl chr 2:86,997,332...87,012,990 		JBrowse link
G E2f6 E2F transcription factor 6 enables IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr 6:39,592,224...39,608,685
Ensembl chr 6:39,592,228...39,608,683 		JBrowse link
G E2f7 E2F transcription factor 7 enables ISS
ISO
IBA
IEA		 GO_REF:0000024
(PMID:22180533)
GO_REF:0000033
GO_REF:0000107		 UniProt
RGD
GO_Central
Ensembl		 PMID:22180533 GO_REF:0000024 GO_REF:0000033 GO_REF:0000107 NCBI chr 7:46,150,533...46,192,739
Ensembl chr 7:46,151,293...46,192,734 		JBrowse link
G E2f8 E2F transcription factor 8 enables ISO
IBA
IEA		 (PMID:16179649)
GO_REF:0000033
GO_REF:0000107		 RGD
GO_Central
Ensembl		 PMID:16179649 GO_REF:0000033 GO_REF:0000107 NCBI chr 1:98,565,717...98,584,265
Ensembl chr 1:98,565,717...98,584,098 		JBrowse link
G E4f1 E4F transcription factor 1 enables IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr10:13,471,478...13,495,018
Ensembl chr10:13,474,456...13,485,974 		JBrowse link
G Ebf1 EBF transcription factor 1 enables IBA
ISO		 GO_REF:0000033
(PMID:12446773), (PMID:22194471)		 GO_Central
RGD		 PMID:12446773 PMID:22194471 GO_REF:0000033 NCBI chr10:29,095,858...29,489,142
Ensembl chr10:29,099,933...29,487,665 		JBrowse link
G Ebf2 EBF transcription factor 2 enables IBA
ISO		 GO_REF:0000033
(PMID:12139918)		 GO_Central
RGD		 PMID:12139918 GO_REF:0000033 NCBI chr15:41,435,509...41,634,403
Ensembl chr15:41,435,509...41,634,403 		JBrowse link
G Ebf3 EBF transcription factor 3 enables IBA
ISO		 GO_REF:0000033
(PMID:12139918)		 GO_Central
RGD		 PMID:12139918 GO_REF:0000033 NCBI chr 1:191,996,726...192,114,593
Ensembl chr 1:191,996,730...192,114,359 		JBrowse link
G Ebf4 EBF family member 4 enables ISO
IBA		 (PMID:35939714)
GO_REF:0000033		 RGD
GO_Central		 PMID:35939714 GO_REF:0000033 NCBI chr 3:117,498,186...117,566,566
Ensembl chr 3:117,498,319...117,566,566 		JBrowse link
G Eef1d eukaryotic translation elongation factor 1 delta enables ISO (PMID:21597468) RGD PMID:21597468 NCBI chr 7:107,581,930...107,596,735
Ensembl chr 7:107,581,930...107,608,799 		JBrowse link
G Egr1 early growth response 1 enables IEA
ISO
IBA
IDA		 GO_REF:0000107
(PMID:20018936), (PMID:31467272)
GO_REF:0000033
PMID:15220929
(PMID:19307576), (PMID:20018936)		 Ensembl
RGD
GO_Central		 PMID:19307576 PMID:20018936 PMID:31467272 PMID:15220929 GO_REF:0000033 GO_REF:0000107, RGD:401827136 NCBI chr18:26,462,967...26,466,766
Ensembl chr18:26,462,981...26,466,766 		JBrowse link
G Egr2 early growth response 2 enables ISO
IBA		 (PMID:12687019)
(PMID:8895582)
GO_REF:0000033		 RGD
GO_Central		 PMID:8895582 PMID:12687019 GO_REF:0000033 NCBI chr20:21,051,270...21,056,322
Ensembl chr20:21,051,277...21,055,562 		JBrowse link
G Egr3 early growth response 3 enables IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr15:45,150,335...45,156,052
Ensembl chr15:45,150,567...45,154,627 		JBrowse link
G Egr4 early growth response 4 enables IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr 4:118,047,869...118,050,328
Ensembl chr 4:118,047,869...118,050,328 		JBrowse link
G Ehf ets homologous factor enables ISO (PMID:17027647) RGD PMID:17027647 NCBI chr 3:89,639,845...89,680,061
Ensembl chr 3:89,641,833...89,679,997 		JBrowse link
G Elf1 E74 like ETS transcription factor 1 enables ISO (PMID:8756667)
(PMID:16002702)		 RGD PMID:8756667 PMID:16002702 NCBI chr15:54,890,644...54,986,721
Ensembl chr15:54,865,616...54,986,699 		JBrowse link
G Elf3 E74 like ETS transcription factor 3 enables IEA
ISO		 GO_REF:0000107
(PMID:11893733)		 Ensembl
RGD		 PMID:11893733 GO_REF:0000107 NCBI chr13:46,690,460...46,695,394
Ensembl chr13:46,690,466...46,695,481 		JBrowse link
G Elf4 E74 like ETS transcription factor 4 enables ISO (PMID:14625302) RGD PMID:14625302 NCBI chr  X:127,587,401...127,639,063
Ensembl chr  X:127,590,650...127,630,200 		JBrowse link
G Elk1 ETS transcription factor ELK1 enables IDA
ISO		 (PMID:12750007) RGD PMID:12750007 PMID:11557580 RGD:628487 NCBI chr  X:1,138,826...1,155,713
Ensembl chr  X:1,139,756...1,155,713 		JBrowse link
G Elk3 ETS transcription factor ELK3 enables ISO (PMID:12788937) RGD PMID:12788937 NCBI chr 7:27,768,582...27,831,088
Ensembl chr 7:27,768,599...27,804,084 		JBrowse link
G Elk4 ETS transcription factor ELK4 enables ISO (PMID:11846562) RGD PMID:11846562 NCBI chr13:43,451,130...43,475,035
Ensembl chr13:43,435,843...43,475,035 		JBrowse link
G Emx1 empty spiracles homeobox 1 enables IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr 4:117,725,148...117,741,616
Ensembl chr 4:117,725,155...117,741,613 		JBrowse link
G Emx2 empty spiracles homeobox 2 enables IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr 1:258,626,584...258,633,594
Ensembl chr 1:258,626,584...258,633,594 		JBrowse link
G En1 engrailed homeobox 1 enables ISO
IBA		 (PMID:21672318)
GO_REF:0000033		 RGD
GO_Central		 PMID:21672318 GO_REF:0000033 NCBI chr13:31,750,892...31,756,477
Ensembl chr13:31,751,545...31,755,943 		JBrowse link
G En2 engrailed homeobox 2 enables IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr 4:7,221,096...7,226,943
Ensembl chr 4:7,221,096...7,226,943 		JBrowse link
G ENSRNOG00000067618 enables IEA GO_REF:0000002 InterPro GO_REF:0000002 Ensembl chr 1:66,075,748...66,077,115 JBrowse link
G Eomes eomesodermin enables IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr 8:118,181,340...118,189,186
Ensembl chr 8:118,181,777...118,188,316 		JBrowse link
G Ep300 E1A binding protein p300 IDA RGD PMID:20702579 RGD:5128544 NCBI chr 7:113,108,476...113,178,529
Ensembl chr 7:113,106,247...113,136,088
Ensembl chr 7:113,106,247...113,136,088 		JBrowse link
G Epas1 endothelial PAS domain protein 1 enables IEA
ISO		 GO_REF:0000107
MGI:88071 (PMID:9113979)		 Ensembl
RGD		 PMID:9113979 GO_REF:0000107 NCBI chr 6:7,790,236...7,871,717
Ensembl chr 6:7,790,647...7,871,228 		JBrowse link
G Erg ETS transcription factor ERG enables ISO (PMID:23093599) RGD PMID:23093599 NCBI chr11:34,678,614...34,900,951
Ensembl chr11:34,678,618...34,845,871 		JBrowse link
G Esr1 estrogen receptor 1 enables ISO (PMID:12047722), (PMID:15345745) RGD PMID:12047722 PMID:15345745 NCBI chr 1:41,106,335...41,499,104
Ensembl chr 1:41,210,475...41,495,002 		JBrowse link
G Esr2 estrogen receptor 2 enables IDA
ISO		 PMID:12047722
(PMID:15345745)		 RGD PMID:15345745 PMID:12047722 RGD:8661629 NCBI chr 6:94,858,438...94,909,630
Ensembl chr 6:94,809,547...94,908,919 		JBrowse link
G Esrra estrogen related receptor, alpha enables ISO (PMID:18234909) RGD PMID:18234909 NCBI chr 1:204,104,100...204,114,182
Ensembl chr 1:204,104,101...204,114,268 		JBrowse link
G Esrrb estrogen-related receptor beta enables ISS
ISO		 GO_REF:0000024
(PMID:18662995), (PMID:27723719)		 UniProt
RGD		 PMID:18662995 PMID:27723719 GO_REF:0000024 NCBI chr 6:106,007,701...106,163,136
Ensembl chr 6:106,008,095...106,160,791 		JBrowse link
G Ets1 ETS proto-oncogene 1, transcription factor enables ISO
IEA		 (PMID:12119294)
GO_REF:0000107		 RGD
Ensembl		 PMID:12119294 GO_REF:0000107 NCBI chr 8:31,045,909...31,168,010
Ensembl chr 8:31,045,945...31,168,010 		JBrowse link
G Ets2 ETS proto-oncogene 2, transcription factor enables ISO (PMID:12637547) RGD PMID:12637547 NCBI chr11:35,021,536...35,038,322
Ensembl chr11:35,021,596...35,038,319 		JBrowse link
G Etv1 ETS variant transcription factor 1 enables ISO (PMID:12750007) RGD PMID:12750007 NCBI chr 6:55,590,149...55,681,784
Ensembl chr 6:55,590,234...55,681,775 		JBrowse link
G Etv2 ETS variant transcription factor 2 enables ISO (PMID:12087183) RGD PMID:12087183 NCBI chr 1:85,890,562...85,894,025
Ensembl chr 1:85,890,559...85,893,431 		JBrowse link
G Etv4 ETS variant transcription factor 4 enables ISO (PMID:14625302) RGD PMID:14625302 NCBI chr10:86,706,749...86,721,974
Ensembl chr10:86,706,749...86,721,974 		JBrowse link
G Etv6 ETS variant transcription factor 6 enables ISO (PMID:17606295) RGD PMID:17606295 NCBI chr 4:166,849,031...167,085,211
Ensembl chr 4:166,847,686...167,084,992 		JBrowse link
G Evx1 even-skipped homeobox 1 enables IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr 4:81,416,590...81,420,967
Ensembl chr 4:81,416,590...81,420,967 		JBrowse link
G Evx2 even-skipped homeobox 2 enables IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr 3:59,558,197...59,562,267
Ensembl chr 3:59,558,197...59,561,872 		JBrowse link
G Ezh2 enhancer of zeste 2 polycomb repressive complex 2 subunit enables ISO (PMID:24137001) RGD PMID:24137001 NCBI chr 4:76,624,399...76,687,362
Ensembl chr 4:76,624,399...76,687,362 		JBrowse link
G Fev FEV transcription factor, ETS family member enables IDA PMID:9468386 NTNU_SB PMID:9468386 RGD:633697 NCBI chr 9:76,439,164...76,443,603
Ensembl chr 9:76,439,172...76,443,065 		JBrowse link
G Fezf1 Fez family zinc finger 1 enables ISO
IBA		 (PMID:20431123)
GO_REF:0000033		 RGD
GO_Central		 PMID:20431123 GO_REF:0000033 NCBI chr 4:51,762,751...51,766,078
Ensembl chr 4:51,762,751...51,766,078 		JBrowse link
G Fezf2 Fez family zinc finger 2 enables IBA
ISO		 GO_REF:0000033
(PMID:20431123)		 GO_Central
RGD		 PMID:20431123 GO_REF:0000033 NCBI chr15:12,768,614...12,777,554
Ensembl chr15:12,773,762...12,777,554 		JBrowse link
G Figla folliculogenesis specific bHLH transcription factor enables ISO (PMID:9362457) RGD PMID:9362457 NCBI chr 4:118,432,517...118,436,846
Ensembl chr 4:118,432,765...118,436,690 		JBrowse link
G Fli1 Fli-1 proto-oncogene, ETS transcription factor enables ISO (PMID:17606295), (PMID:17962413) RGD PMID:17606295 PMID:17962413 NCBI chr 8:30,831,422...30,950,468
Ensembl chr 8:30,832,753...30,950,433 		JBrowse link
G Fos Fos proto-oncogene, AP-1 transcription factor subunit enables ISO
IBA		 (PMID:30670568)
GO_REF:0000033
(PMID:11925568), (PMID:23980096)		 RGD
GO_Central		 PMID:11925568 PMID:23980096 PMID:30670568 GO_REF:0000033 NCBI chr 6:105,121,170...105,124,036
Ensembl chr 6:105,121,170...105,124,036 		JBrowse link
G Fosb FosB proto-oncogene, AP-1 transcription factor subunit enables ISO
IBA		 (PMID:12525489)
GO_REF:0000033		 RGD
GO_Central		 PMID:12525489 GO_REF:0000033 NCBI chr 1:78,954,312...78,961,492
Ensembl chr 1:78,954,115...78,961,465 		JBrowse link
G Fosl1 FOS like 1, AP-1 transcription factor subunit enables IDA
IBA
ISO		 PMID:12371906
GO_REF:0000033
(PMID:21673316)		 GO_Central
RGD		 PMID:21673316 PMID:12371906 GO_REF:0000033, RGD:629541 NCBI chr 1:202,754,549...202,763,057
Ensembl chr 1:202,754,529...202,764,930 		JBrowse link
G Fosl2 FOS like 2, AP-1 transcription factor subunit enables IEA
IBA
ISO		 GO_REF:0000107
GO_REF:0000033
(PMID:24464219)		 Ensembl
GO_Central
RGD		 PMID:24464219 GO_REF:0000033 GO_REF:0000107 NCBI chr 6:24,297,898...24,319,219
Ensembl chr 6:24,300,956...24,320,034 		JBrowse link
G Foxa1 forkhead box A1 enables IEA
ISO
IBA		 GO_REF:0000107
(PMID:10049364)
GO_REF:0000033
(PMID:25802280)		 Ensembl
RGD
GO_Central		 PMID:10049364 PMID:25802280 GO_REF:0000033 GO_REF:0000107 NCBI chr 6:75,099,907...75,136,534
Ensembl chr 6:75,103,503...75,136,188 		JBrowse link
G Foxa2 forkhead box A2 enables ISO
IBA
IDA
IEA		 (PMID:12642491)
(PMID:12488434), (PMID:15485926), (PMID:15987774), (PMID:16912278)
GO_REF:0000033
PMID:20735474
GO_REF:0000107		 RGD
GO_Central
Ensembl		 PMID:12488434 PMID:12642491 PMID:15485926 PMID:15987774 PMID:16912278 More... GO_REF:0000033 GO_REF:0000107, RGD:8553707 NCBI chr 3:135,470,123...135,474,326
Ensembl chr 3:135,470,131...135,474,326 		JBrowse link
G Foxa3 forkhead box A3 enables IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr 1:78,662,067...78,672,321
Ensembl chr 1:78,662,431...78,672,155 		JBrowse link
G Foxb2 forkhead box B2 enables IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr 1:214,232,731...214,234,226
Ensembl chr 1:214,232,731...214,234,226 		JBrowse link
G Foxc1 forkhead box C1 enables IBA
ISO		 GO_REF:0000033
(PMID:25808752)		 GO_Central
RGD		 PMID:25808752 GO_REF:0000033 NCBI chr17:32,631,379...32,635,361
Ensembl chr17:32,633,142...32,634,803 		JBrowse link
G Foxc2 forkhead box C2 enables ISO
IBA		 (PMID:20956529)
GO_REF:0000033		 RGD
GO_Central		 PMID:20956529 GO_REF:0000033 NCBI chr19:49,186,034...49,188,736
Ensembl chr19:49,185,662...49,188,737 		JBrowse link
G Foxd1 forkhead box D1 enables IEA
ISO		 GO_REF:0000107
(PMID:13678594)		 Ensembl
RGD		 PMID:13678594 GO_REF:0000107 NCBI chr 2:29,702,558...29,704,978
Ensembl chr 2:29,702,558...29,704,978 		JBrowse link
G Foxd2 forkhead box D2 enables IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr 5:128,427,986...128,430,709
Ensembl chr 5:128,429,020...128,430,504 		JBrowse link
G Foxe1 forkhead box E1 enables IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr 5:60,630,027...60,632,835
Ensembl chr 5:60,630,027...60,632,835 		JBrowse link
G Foxe3 forkhead box E3 enables IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr 5:128,444,912...128,446,494
Ensembl chr 5:128,445,594...128,446,454 		JBrowse link
G Foxf1 forkhead box F1 enables IBA
ISO		 GO_REF:0000033
(PMID:15987774)		 GO_Central
RGD		 PMID:15987774 GO_REF:0000033 NCBI chr19:49,153,949...49,157,741
Ensembl chr19:49,153,699...49,157,738 		JBrowse link
G Foxi1 forkhead box I1 enables ISO
IBA		 (PMID:19214237)
(PMID:16159312)
GO_REF:0000033		 RGD
GO_Central		 PMID:16159312 PMID:19214237 GO_REF:0000033 NCBI chr10:18,806,292...18,810,231
Ensembl chr10:18,806,308...18,810,231 		JBrowse link
G Foxi3 forkhead box I3 enables IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr 4:102,933,487...102,937,655
Ensembl chr 4:102,933,409...102,937,655 		JBrowse link
G Foxj1 forkhead box J1 enables IEA
ISO
IBA		 GO_REF:0000107
(PMID:9096351)
GO_REF:0000033		 Ensembl
RGD
GO_Central		 PMID:9096351 GO_REF:0000033 GO_REF:0000107 NCBI chr10:101,566,299...101,570,370
Ensembl chr10:101,566,304...101,570,237 		JBrowse link
G Foxj2 forkhead box J2 enables ISO
IBA		 (PMID:10777590)
GO_REF:0000033		 RGD
GO_Central		 PMID:10777590 GO_REF:0000033 NCBI chr 4:156,047,043...156,073,540
Ensembl chr 4:156,046,969...156,073,518 		JBrowse link
G Foxj3 forkhead box J3 enables IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr 5:133,140,344...133,228,489
Ensembl chr 5:133,140,884...133,228,489 		JBrowse link
G Foxk1 forkhead box K1 enables IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr12:12,110,119...12,175,089
Ensembl chr12:12,115,950...12,175,089 		JBrowse link
G Foxk2 forkhead box K2 enables ISO (PMID:9065434) RGD PMID:9065434 NCBI chr10:106,542,643...106,592,569
Ensembl chr10:106,542,566...106,592,563 		JBrowse link
G Foxl1 forkhead box L1 enables IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr19:49,197,269...49,200,682
Ensembl chr19:49,197,400...49,198,425 		JBrowse link
G Foxl2 forkhead box L2 enables IBA
ISO		 GO_REF:0000033
(PMID:12943993)		 GO_Central
RGD		 PMID:12943993 GO_REF:0000033 NCBI chr 8:99,512,971...99,514,500
Ensembl chr 8:99,513,303...99,514,427 		JBrowse link
G Foxl3 forkhead box L3 enables IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr12:15,812,177...15,814,534
Ensembl chr12:15,812,674...15,814,534 		JBrowse link
G Foxo1 forkhead box O1 enables IBA
ISO		 GO_REF:0000033
(PMID:17090532)		 GO_Central
RGD		 PMID:17090532 GO_REF:0000033 NCBI chr 2:136,312,168...136,390,603
Ensembl chr 2:136,312,168...136,387,790 		JBrowse link
G Foxo3 forkhead box O3 enables IBA
ISO		 GO_REF:0000033
(PMID:17521387)		 GO_Central
RGD		 PMID:17521387 GO_REF:0000033 NCBI chr20:45,669,708...45,764,606
Ensembl chr20:45,672,995...45,764,561 		JBrowse link
G Foxo4 forkhead box O4 enables IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr  X:66,385,241...66,392,115
Ensembl chr  X:66,385,558...66,392,115 		JBrowse link
G Foxo6 forkhead box O6 enables IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr 5:133,856,087...133,876,387
Ensembl chr 5:133,856,072...133,876,573 		JBrowse link
G Foxp1 forkhead box P1 enables IBA
ISO		 GO_REF:0000033
(PMID:14701752)		 GO_Central
RGD		 PMID:14701752 GO_REF:0000033 NCBI chr 4:131,559,599...132,155,092
Ensembl chr 4:131,564,756...132,112,258 		JBrowse link
G Foxp2 forkhead box P2 enables IBA
ISO		 GO_REF:0000033
(PMID:14701752)		 GO_Central
RGD		 PMID:14701752 GO_REF:0000033 NCBI chr 4:43,133,827...43,712,442
Ensembl chr 4:43,133,912...43,711,683 		JBrowse link
G Foxp3 forkhead box P3 enables IBA
ISO		 GO_REF:0000033
(PMID:17377532)		 GO_Central
RGD		 PMID:17377532 GO_REF:0000033 NCBI chr  X:14,908,494...14,924,994
Ensembl chr  X:14,908,494...14,923,838 		JBrowse link
G Foxp4 forkhead box P4 enables IBA
ISO		 GO_REF:0000033
(PMID:14701752)		 GO_Central
RGD		 PMID:14701752 GO_REF:0000033 NCBI chr 9:13,058,506...13,115,406
Ensembl chr 9:13,058,476...13,114,879 		JBrowse link
G Foxq1 forkhead box Q1 enables IEA
ISO
IBA		 GO_REF:0000107
(PMID:10896677)
GO_REF:0000033		 Ensembl
RGD
GO_Central		 PMID:10896677 GO_REF:0000033 GO_REF:0000107 NCBI chr17:32,912,744...32,915,377
Ensembl chr17:32,912,744...32,915,377
Ensembl chr17:32,912,744...32,915,377 		JBrowse link
G Foxs1 forkhead box S1 enables IBA
ISO		 GO_REF:0000033
(PMID:18288644)		 GO_Central
RGD		 PMID:18288644 GO_REF:0000033 NCBI chr 3:141,397,012...141,398,296
Ensembl chr 3:141,397,016...141,398,281 		JBrowse link
G Fubp1 far upstream element binding protein 1 enables ISO (PMID:18836447) RGD PMID:18836447 NCBI chr 2:241,159,481...241,186,591
Ensembl chr 2:241,159,512...241,186,602 		JBrowse link
G Gabpa GA binding protein transcription factor subunit alpha enables ISO (PMID:12750007), (PMID:22306510)
(PMID:11004506), (PMID:15361867)		 RGD PMID:11004506 PMID:12750007 PMID:15361867 PMID:22306510 NCBI chr11:23,888,586...23,917,612
Ensembl chr11:23,888,815...23,917,605 		JBrowse link
G Gata1 GATA binding protein 1 enables ISS
IBA
ISO		 GO_REF:0000024
GO_REF:0000033
(PMID:7896801)
(PMID:15920471), (PMID:20133935), (PMID:24245781)		 UniProt
GO_Central
RGD		 PMID:7896801 PMID:15920471 PMID:20133935 PMID:24245781 GO_REF:0000024 GO_REF:0000033 NCBI chr  X:14,529,706...14,537,530
Ensembl chr  X:14,529,702...14,537,530 		JBrowse link
G Gata2 GATA binding protein 2 enables ISO
IBA		 (PMID:17962413), (PMID:21245044)
GO_REF:0000033		 RGD
GO_Central		 PMID:17962413 PMID:21245044 GO_REF:0000033 NCBI chr 4:120,654,205...120,667,763
Ensembl chr 4:120,658,986...120,667,761 		JBrowse link
G Gata3 GATA binding protein 3 enables ISO
IBA		 (PMID:19674970)
GO_REF:0000033
(PMID:10549629), (PMID:20484821), (PMID:20636338)		 RGD
GO_Central		 PMID:10549629 PMID:19674970 PMID:20484821 PMID:20636338 GO_REF:0000033 NCBI chr17:68,643,760...68,666,000
Ensembl chr17:68,643,873...68,665,391 		JBrowse link
G Gata4 GATA binding protein 4 enables ISO
IBA		 (PMID:21220346)
GO_REF:0000033
(PMID:15539431), (PMID:21029371)		 RGD
GO_Central		 PMID:15539431 PMID:21029371 PMID:21220346 GO_REF:0000033 NCBI chr15:37,459,601...37,531,291
Ensembl chr15:37,459,601...37,505,636 		JBrowse link
G Gata5 GATA binding protein 5 enables ISO
IBA		 (PMID:15987774)
GO_REF:0000033		 RGD
GO_Central		 PMID:15987774 GO_REF:0000033 NCBI chr 3:167,418,563...167,426,751
Ensembl chr 3:167,418,565...167,426,751 		JBrowse link
G Gata6 GATA binding protein 6 enables IEA
IBA
ISO		 GO_REF:0000107
GO_REF:0000033
(PMID:15987774), (PMID:16199866), (PMID:16621466), (PMID:21350014)		 Ensembl
GO_Central
RGD		 PMID:15987774 PMID:16199866 PMID:16621466 PMID:21350014 GO_REF:0000033 GO_REF:0000107 NCBI chr18:2,188,121...2,219,532
Ensembl chr18:2,188,121...2,219,532 		JBrowse link
G Gcm1 glial cells missing transcription factor 1 enables ISO
IBA		 (PMID:15385555)
GO_REF:0000033		 RGD
GO_Central		 PMID:15385555 GO_REF:0000033 NCBI chr 8:78,925,687...78,938,924
Ensembl chr 8:78,925,687...78,938,924 		JBrowse link
G Gcm2 glial cells missing transcription factor 2 enables IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr17:23,652,637...23,661,754
Ensembl chr17:23,652,637...23,661,754 		JBrowse link
G Gfi1 growth factor independent 1 transcriptional repressor enables IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr14:2,040,576...2,056,874
Ensembl chr14:2,042,434...2,051,814 		JBrowse link
G Gfi1b growth factor independent 1B transcriptional repressor enables IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr 3:11,940,232...11,952,989
Ensembl chr 3:11,940,233...11,952,942 		JBrowse link
G Giot1 gonadotropin inducible ovarian transcription factor 1 enables IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr 7:10,215,602...10,236,423
Ensembl chr 7:10,202,982...10,237,099 		JBrowse link
G Gli1 GLI family zinc finger 1 enables IBA
ISO		 GO_REF:0000033
(PMID:15614767), (PMID:23740243)		 GO_Central
RGD		 PMID:15614767 PMID:23740243 GO_REF:0000033 NCBI chr 7:63,156,926...63,169,579
Ensembl chr 7:63,156,926...63,169,251 		JBrowse link
G Gli2 GLI family zinc finger 2 enables IBA
ISO		 GO_REF:0000033
(PMID:15614767), (PMID:16880529)		 GO_Central
RGD		 PMID:15614767 PMID:16880529 GO_REF:0000033 NCBI chr13:29,946,882...30,163,589
Ensembl chr13:29,946,809...30,163,574 		JBrowse link
G Gli3 GLI family zinc finger 3 enables ISO
IBA		 (PMID:2118997)
GO_REF:0000033		 RGD
GO_Central		 PMID:2118997 GO_REF:0000033 NCBI chr17:49,438,567...49,709,712
Ensembl chr17:49,438,567...49,709,712 		JBrowse link
G Gli4 GLI family zinc finger 4 enables IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr 7:107,325,584...107,330,911
Ensembl chr 7:107,325,607...107,330,907 		JBrowse link
G Glis1 GLIS family zinc finger 1 enables IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr 5:122,222,155...122,412,141
Ensembl chr 5:122,222,128...122,412,141 		JBrowse link
G Glis2 GLIS family zinc finger 2 enables IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr10:10,951,157...10,978,524
Ensembl chr10:10,951,371...10,971,578 		JBrowse link
G Glis3 GLIS family zinc finger 3 enables IBA
ISO		 GO_REF:0000033
(PMID:14500813), (PMID:18263616), (PMID:19264802)		 GO_Central
RGD		 PMID:14500813 PMID:18263616 PMID:19264802 GO_REF:0000033 NCBI chr 1:225,976,029...226,395,849
Ensembl chr 1:225,976,326...226,395,899 		JBrowse link
G Gmeb1 glucocorticoid modulatory element binding protein 1 enables ISO
IBA		 (PMID:10386584)
(PMID:10692587)
GO_REF:0000033		 RGD
GO_Central		 PMID:10386584 PMID:10692587 GO_REF:0000033 NCBI chr 5:144,421,151...144,462,448
Ensembl chr 5:144,420,555...144,462,602 		JBrowse link
G Gmeb2 glucocorticoid modulatory element binding protein 2 enables IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr 3:168,362,650...168,400,788
Ensembl chr 3:168,362,650...168,400,788 		JBrowse link
G Grhl1 grainyhead-like transcription factor 1 enables ISO
IBA		 (PMID:12175488)
GO_REF:0000033		 RGD
GO_Central		 PMID:12175488 GO_REF:0000033 NCBI chr 6:41,207,325...41,257,516
Ensembl chr 6:41,207,348...41,254,301 		JBrowse link
G Grhl2 grainyhead-like transcription factor 2 enables IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr 7:68,400,287...68,530,269
Ensembl chr 7:68,400,477...68,530,258 		JBrowse link
G Grhl3 grainyhead-like transcription factor 3 enables IBA
ISO		 GO_REF:0000033
(PMID:12666198), (PMID:15831758)		 GO_Central
RGD		 PMID:12666198 PMID:15831758 GO_REF:0000033 NCBI chr 5:147,774,161...147,806,291
Ensembl chr 5:147,774,160...147,806,160 		JBrowse link
G Gsc goosecoid homeobox enables IBA
ISO		 GO_REF:0000033
(PMID:9417125)		 GO_Central
RGD		 PMID:9417125 GO_REF:0000033 NCBI chr 6:123,388,072...123,390,111
Ensembl chr 6:123,388,072...123,390,111 		JBrowse link
G Gsc2 goosecoid homeobox 2 enables IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr11:83,070,784...83,075,874
Ensembl chr11:83,072,138...83,074,126 		JBrowse link
G Gsx1 GS homeobox 1 enables IBA
ISO		 GO_REF:0000033
(PMID:11731616)		 GO_Central
RGD		 PMID:11731616 GO_REF:0000033 NCBI chr12:7,880,663...7,882,947
Ensembl chr12:7,881,460...7,882,753 		JBrowse link
G Gtf2ird1 GTF2I repeat domain containing 1 enables ISO (PMID:9774679) RGD PMID:9774679 NCBI chr12:22,254,113...22,361,052
Ensembl chr12:22,254,221...22,361,040 		JBrowse link
G Gzf1 GDNF-inducible zinc finger protein 1 enables ISO
IBA		 (PMID:16049025)
GO_REF:0000033		 RGD
GO_Central		 PMID:16049025 GO_REF:0000033 NCBI chr 3:136,119,004...136,131,223
Ensembl chr 3:136,119,113...136,131,223 		JBrowse link
G H2az1 H2A.Z variant histone 1 enables ISO (PMID:19633671), (PMID:19834540), (PMID:23637611) RGD PMID:19633671 PMID:19834540 PMID:23637611 NCBI chr 2:226,355,668...226,357,984
Ensembl chr 2:226,355,708...226,358,485 		JBrowse link
G H3f3a H3.3 histone A enables ISO (PMID:19633671) RGD PMID:19633671 NCBI chr13:92,533,289...92,544,902
Ensembl chr13:92,533,298...92,544,908 		JBrowse link
G H3f3b H3.3 histone B