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ONTOLOGY REPORT - ANNOTATIONS

Term:chromatin binding
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Accession:GO:0003682 term browser browse the term
Definition:Binding to chromatin, the network of fibers of DNA, protein, and sometimes RNA, that make up the chromosomes of the eukaryotic nucleus during interphase.
Synonyms:narrow_synonym: lamin/chromatin binding;   nuclear membrane vesicle binding to chromatin
 related_synonym: microtubule/chromatin interaction

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chromatin binding term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Acss2 acyl-CoA synthetase short chain family member 2 enables ISO (PMID:28562591) UniProt PMID:28562591 NCBI chrNW_004624842:4,470,551...4,523,174
Ensembl chrNW_004624842:4,471,360...4,522,849 		JBrowse link
G Actl6a actin like 6A enables IEA Ensembl GO_REF:0000107 NCBI chrNW_004624730:57,305,105...57,337,653
Ensembl chrNW_004624730:57,305,053...57,337,797 		JBrowse link
G Actrt1 actin related protein T1 enables ISO (PMID:28869610) UniProt PMID:28869610 NCBI chrNW_004624797:7,165,111...7,166,494 JBrowse link
G Adnp activity dependent neuroprotector homeobox enables ISO (PMID:17222401) MGI PMID:17222401 NCBI chrNW_004624790:4,822,467...4,854,852
Ensembl chrNW_004624790:4,832,494...4,854,845 		JBrowse link
G Aire autoimmune regulator enables ISO (PMID:18292755) UniProt PMID:18292755 NCBI chrNW_004624745:29,850,410...29,857,351
Ensembl chrNW_004624745:29,850,560...29,857,029 		JBrowse link
G Ajuba ajuba LIM protein enables IEA Ensembl GO_REF:0000107 NCBI chrNW_004624820:9,551,664...9,562,773
Ensembl chrNW_004624820:9,552,287...9,563,472 		JBrowse link
G Ankrd17 ankyrin repeat domain 17 enables ISO (PMID:19150984) UniProt PMID:19150984 NCBI chrNW_004624735:34,337,722...34,516,891
Ensembl chrNW_004624735:34,337,835...34,519,559 		JBrowse link
G Ankrd2 ankyrin repeat domain 2 enables ISO (PMID:24434510) MGI PMID:24434510 NCBI chrNW_004624737:9,219,092...9,228,218
Ensembl chrNW_004624737:9,218,712...9,228,319 		JBrowse link
G Apbb1 amyloid beta precursor protein binding family B member 1 enables ISO (PMID:19343227) UniProt PMID:19343227 NCBI chrNW_004624817:7,913,541...7,937,945
Ensembl chrNW_004624817:7,909,468...7,936,487 		JBrowse link
G App amyloid beta precursor protein enables ISO (PMID:19057576) ARUK-UCL PMID:19057576 NCBI chrNW_004624745:13,904,912...14,159,374
Ensembl chrNW_004624745:13,902,577...14,159,372 		JBrowse link
G Aptx aprataxin enables IEA Ensembl GO_REF:0000107 NCBI chrNW_004624736:37,729,624...37,757,780
Ensembl chrNW_004624736:37,730,072...37,749,174 		JBrowse link
G Ar androgen receptor enables ISO (PMID:21730289) RGD
UniProt		 PMID:3499428 PMID:21730289 RGD:10043310 NCBI chrNW_004624891:3,135,824...3,330,487
Ensembl chrNW_004624891:3,138,848...3,329,459 		JBrowse link
G Arid3a AT-rich interaction domain 3A enables ISO (PMID:21955986) MGI PMID:21955986 NCBI chrNW_004624828:7,636,211...7,666,868
Ensembl chrNW_004624828:7,635,383...7,666,416 		JBrowse link
G Arid3c AT-rich interaction domain 3C enables ISO (PMID:21955986) MGI PMID:21955986 NCBI chrNW_004624736:39,016,483...39,023,701
Ensembl chrNW_004624736:39,016,483...39,023,668 		JBrowse link
G Arid5a AT-rich interaction domain 5A enables ISO (PMID:21346191) MGI PMID:21346191 NCBI chrNW_004624749:2,491,162...2,504,580
Ensembl chrNW_004624749:2,491,156...2,506,110 		JBrowse link
G Arx aristaless related homeobox enables ISO (PMID:21966449) MGI PMID:21966449 NCBI chrNW_004624897:1,279,138...1,303,210 JBrowse link
G Ascl1 achaete-scute family bHLH transcription factor 1 enables ISO (PMID:23639443) MGI PMID:23639443 NCBI chrNW_004624750:5,487,046...5,489,399
Ensembl chrNW_004624750:5,487,053...5,493,339 		JBrowse link
G Asf1a anti-silencing function 1A histone chaperone enables ISO (PMID:24105743) MGI PMID:24105743 NCBI chrNW_004624798:11,306,849...11,317,075 JBrowse link
G Ash1l ASH1 like histone lysine methyltransferase enables IEA InterPro GO_REF:0000002 NCBI chrNW_004624885:961,880...1,136,990
Ensembl chrNW_004624885:961,880...1,136,731 		JBrowse link
G Asxl1 ASXL transcriptional regulator 1 enables IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004624741:188,985...258,065
Ensembl chrNW_004624741:188,745...250,142 		JBrowse link
G Asxl2 ASXL transcriptional regulator 2 enables IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004624738:7,958,610...8,100,223
Ensembl chrNW_004624738:7,603,252...8,100,369 		JBrowse link
G Asxl3 ASXL transcriptional regulator 3 enables IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004624779:8,099,434...8,270,812
Ensembl chrNW_004624779:8,144,474...8,271,269 		JBrowse link
G Atad2 ATPase family AAA domain containing 2 enables IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004624735:31,570,336...31,637,253
Ensembl chrNW_004624735:31,570,451...31,636,552 		JBrowse link
G Atad2b ATPase family AAA domain containing 2B enables IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004624738:6,139,729...6,302,875
Ensembl chrNW_004624738:6,143,025...6,302,579 		JBrowse link
G Atf2 activating transcription factor 2 enables ISO (PMID:17767158) MGI PMID:17767158 NCBI chrNW_004624787:12,241,838...12,338,089 JBrowse link
G Atf5 activating transcription factor 5 enables ISO PMID:21212266
(PMID:24216764)
(PMID:21212266)		 UniProt PMID:21212266 PMID:24216764 RGD:10400862 NCBI chrNW_004624832:4,400,586...4,405,203
Ensembl chrNW_004624832:4,396,604...4,405,185 		JBrowse link
G Atxn1 ataxin 1 enables ISO (PMID:20628574) MGI PMID:20628574 NCBI chrNW_004624756:9,770,261...10,167,560
Ensembl chrNW_004624756:10,011,250...10,160,469 		JBrowse link
G Atxn7 ataxin 7 enables ISO (PMID:14613968) MGI PMID:14613968 NCBI chrNW_004624888:1,910,385...2,045,038
Ensembl chrNW_004624888:1,914,063...1,999,755 		JBrowse link
G Auts2 activator of transcription and developmental regulator AUTS2 enables ISO (PMID:25519132) MGI PMID:25519132 NCBI chrNW_004624740:10,339,411...11,463,292
Ensembl chrNW_004624740:10,341,274...10,367,075 		JBrowse link
G Bahcc1 BAH domain and coiled-coil containing 1 enables IEA InterPro GO_REF:0000002 NCBI chrNW_004624801:10,404,029...10,461,789
Ensembl chrNW_004624801:10,408,133...10,459,840 		JBrowse link
G Bahd1 bromo adjacent homology domain containing 1 enables IEA TreeGrafter
InterPro		 GO_REF:0000002 GO_REF:0000118 NCBI chrNW_004624804:7,741,141...7,767,049
Ensembl chrNW_004624804:7,742,217...7,769,108 		JBrowse link
G Bap1 BRCA1 associated deubiquitinase 1 enables ISO (PMID:19815555) UniProt PMID:19815555 NCBI chrNW_004624822:4,809,489...4,818,514
Ensembl chrNW_004624822:4,809,405...4,818,515 		JBrowse link
G Barx2 BARX homeobox 2 enables ISO (PMID:15728386), (PMID:15800003) MGI PMID:15728386 PMID:15800003 NCBI chrNW_004624812:3,720,302...3,802,630
Ensembl chrNW_004624812:3,720,303...3,802,701 		JBrowse link
G Bcas3 BCAS3 microtubule associated cell migration factor enables ISO (PMID:17505058) UniProt PMID:17505058 NCBI chrNW_004624871:2,444,262...3,036,148
Ensembl chrNW_004624871:2,444,952...3,034,311 		JBrowse link
G Bcl6 BCL6 transcription repressor enables ISO (PMID:12817026), (PMID:15240705)
(PMID:12097386)		 MGI PMID:12097386 PMID:12817026 PMID:15240705 NCBI chrNW_004624730:69,145,035...69,167,583
Ensembl chrNW_004624730:69,154,080...69,167,689 		JBrowse link
G Bend6 BEN domain containing 6 enables ISO (PMID:23571214) MGI PMID:23571214 NCBI chrNW_004624753:18,778,611...18,848,599
Ensembl chrNW_004624753:18,795,568...18,823,842 		JBrowse link
G Bhlhe22 basic helix-loop-helix family member e22 enables ISO (PMID:22284184) MGI PMID:22284184 NCBI chrNW_004624744:27,008,292...27,009,602
Ensembl chrNW_004624744:27,008,471...27,009,583 		JBrowse link
G Bmi1 BMI1 proto-oncogene, polycomb ring finger enables ISO (PMID:16359901), (PMID:24105743) MGI PMID:16359901 PMID:24105743 NCBI chrNW_004624796:6,277,201...6,282,830
Ensembl chrNW_004624796:6,274,561...6,282,984 		JBrowse link
G Brca1 BRCA1 DNA repair associated ISO RGD PMID:15574597 RGD:9586065 NCBI chrNW_004624795:1,186,043...1,238,986
Ensembl chrNW_004624795:1,188,136...1,241,964 		JBrowse link
G Brd4 bromodomain containing 4 enables ISO (PMID:23154982), (PMID:23752591)
(PMID:20871596), (PMID:23728299)		 MGI
UniProt		 PMID:20871596 PMID:23154982 PMID:23728299 PMID:23752591 NCBI chrNW_004624901:2,348,218...2,434,429
Ensembl chrNW_004624901:2,346,734...2,380,852 		JBrowse link
G Brip1 BRCA1 interacting DNA helicase 1 ISO RGD PMID:22212472 RGD:11252153 NCBI chrNW_004624871:2,051,044...2,195,364
Ensembl chrNW_004624871:2,052,863...2,198,165 		JBrowse link
G Calcoco1 calcium binding and coiled-coil domain 1 enables ISO (PMID:15383530) MGI PMID:15383530 NCBI chrNW_004624904:1,792,861...1,809,265
Ensembl chrNW_004624904:1,790,587...1,809,277 		JBrowse link
G Camta2 calmodulin binding transcription activator 2 enables ISO (PMID:16678093) MGI PMID:16678093 NCBI chrNW_004624786:8,820,062...8,836,711
Ensembl chrNW_004624786:8,820,170...8,836,703 		JBrowse link
G Cbfa2t3 CBFA2/RUNX1 partner transcriptional co-repressor 3 enables ISO (PMID:19799863) MGI PMID:19799863 NCBI chrNW_004624746:716,848...773,169
Ensembl chrNW_004624746:716,836...773,169 		JBrowse link
G Cbx2 chromobox 2 enables ISO (PMID:16687444) MGI PMID:16687444 NCBI chrNW_004624801:8,951,659...8,961,280
Ensembl chrNW_004624801:8,951,723...8,958,352 		JBrowse link
G Cbx4 chromobox 4 enables ISO (PMID:17392792) MGI PMID:17392792 NCBI chrNW_004624801:9,002,290...9,008,305
Ensembl chrNW_004624801:9,003,059...9,008,203 		JBrowse link
G Cbx5 chromobox 5 enables IEA Ensembl GO_REF:0000107 NCBI chrNW_004624904:2,273,054...2,313,723
Ensembl chrNW_004624904:2,276,036...2,296,706 		JBrowse link
G Cbx6 chromobox 6 enables IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004624752:9,291,955...9,302,451
Ensembl chrNW_004624752:9,291,892...9,302,688 		JBrowse link
G Cbx7 chromobox 7 enables ISO (PMID:22056776) MGI PMID:22056776 NCBI chrNW_004624752:9,133,587...9,151,216
Ensembl chrNW_004624752:9,133,569...9,151,934 		JBrowse link
G Cbx8 chromobox 8 enables IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004624801:8,966,366...8,969,458
Ensembl chrNW_004624801:8,967,013...8,969,697 		JBrowse link
G Ccnt1 cyclin T1 enables ISO (PMID:18662700) MGI PMID:18662700 NCBI chrNW_004624816:3,396,740...3,445,976
Ensembl chrNW_004624816:3,421,709...3,442,170 		JBrowse link
G Ccnt2 cyclin T2 enables ISO (PMID:16245309) UniProt PMID:16245309 NCBI chrNW_004624732:34,307,124...34,357,354 JBrowse link
G Cdc45 cell division cycle 45 enables IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004624747:132,731...161,590
Ensembl chrNW_004624747:132,835...161,553 		JBrowse link
G Cdc6 cell division cycle 6 enables IEA Ensembl GO_REF:0000107 NCBI chrNW_004624795:2,980,334...2,992,579
Ensembl chrNW_004624795:2,980,185...2,992,330 		JBrowse link
G Cdk1 cyclin dependent kinase 1 enables ISO (PMID:18625720) MGI PMID:18625720 NCBI chrNW_004624791:2,891,239...2,915,001 JBrowse link
G Cdk9 cyclin dependent kinase 9 enables ISO (PMID:16245309), (PMID:23154982) UniProt
RGD		 PMID:16245309 PMID:20081228 PMID:23154982 RGD:9698419 NCBI chrNW_004624760:7,760,474...7,765,711 JBrowse link
G Cdt1 chromatin licensing and DNA replication factor 1 enables ISO (PMID:11125146) CAFA PMID:11125146 NCBI chrNW_004624746:808,463...813,464
Ensembl chrNW_004624746:809,252...812,993 		JBrowse link
G Cdyl chromodomain Y like enables ISO (PMID:24144980) UniProt PMID:24144980 NCBI chrNW_004624756:20,261,150...20,471,697
Ensembl chrNW_004624756:20,261,019...20,406,338 		JBrowse link
G Cebpa CCAAT enhancer binding protein alpha enables ISO (PMID:22780989) MGI PMID:22780989 NCBI chrNW_004624794:9,809,007...9,813,418 JBrowse link
G Cebpb CCAAT enhancer binding protein beta enables ISO (PMID:21122806), (PMID:24216764) MGI PMID:21122806 PMID:24216764 NCBI chrNW_004624790:5,367,808...5,369,686
Ensembl chrNW_004624790:5,368,349...5,369,377 		JBrowse link
G Cenpb centromere protein B enables IEA InterPro GO_REF:0000002 NCBI chrNW_004624741:4,868,453...4,870,933
Ensembl chrNW_004624741:4,869,248...4,870,897 		JBrowse link
G Cenps centromere protein S enables IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004624818:2,244,114...2,256,870
Ensembl chrNW_004624818:2,249,369...2,256,834 		JBrowse link
G Cgas cyclic GMP-AMP synthase enables IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004624819:587,739...680,618
Ensembl chrNW_004624819:643,045...680,684 		JBrowse link
G Chd1 chromodomain helicase DNA binding protein 1 enables IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004624743:17,311,167...17,380,458 JBrowse link
G Chd2 chromodomain helicase DNA binding protein 2 enables IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004624768:10,786,139...10,922,558
Ensembl chrNW_004624768:10,785,815...10,922,790 		JBrowse link
G Chd4 chromodomain helicase DNA binding protein 4 enables IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004624860:3,285,086...3,318,939
Ensembl chrNW_004624860:3,283,837...3,318,985 		JBrowse link
G Chd5 chromodomain helicase DNA binding protein 5 enables ISO
IEA		 RGD
TreeGrafter		 PMID:21931736 GO_REF:0000118 RGD:8553453 NCBI chrNW_004624818:5,203,200...5,251,057
Ensembl chrNW_004624818:5,203,304...5,249,033 		JBrowse link
G Chd8 chromodomain helicase DNA binding protein 8 enables IEA Ensembl GO_REF:0000107 NCBI chrNW_004624825:7,411,629...7,475,111
Ensembl chrNW_004624825:7,411,629...7,474,526 		JBrowse link
G Cic capicua transcriptional repressor enables ISO (PMID:20628574), (PMID:22014525) MGI PMID:20628574 PMID:22014525 NCBI chrNW_004624907:458,447...486,482
Ensembl chrNW_004624907:454,948...486,565 		JBrowse link
G Cited1 Cbp/p300 interacting transactivator with Glu/Asp rich carboxy-terminal domain 1 enables ISO (PMID:17938205) UniProt PMID:17938205 NCBI chrNW_004624903:2,596,049...2,601,315 JBrowse link
G Cited2 Cbp/p300 interacting transactivator with Glu/Asp rich carboxy-terminal domain 2 enables ISO (PMID:15475956), (PMID:16619037), (PMID:18653562) MGI PMID:15475956 PMID:16619037 PMID:18653562 NCBI chrNW_004624753:14,630,842...14,633,245
Ensembl chrNW_004624753:14,630,827...14,632,536 		JBrowse link
G Cks2 CDC28 protein kinase regulatory subunit 2 enables IEA Ensembl GO_REF:0000107 NCBI chrNW_004624765:23,297,668...23,302,545
Ensembl chrNW_004624765:23,297,259...23,302,711 		JBrowse link
G Coq7 coenzyme Q7, hydroxylase enables ISO (PMID:25961505) WB PMID:25961505 NCBI chrNW_004624782:2,682,489...2,689,662
Ensembl chrNW_004624782:2,682,486...2,689,661 		JBrowse link
G Cramp1 cramped chromatin regulator homolog 1 enables IEA TreeGrafter
InterPro		 GO_REF:0000002 GO_REF:0000118 NCBI chrNW_004624913:551,610...616,009
Ensembl chrNW_004624913:553,470...614,680 		JBrowse link
G Creb3 cAMP responsive element binding protein 3 enables ISO (PMID:16940180) UniProt PMID:16940180 NCBI chrNW_004624868:5,056,415...5,061,234
Ensembl chrNW_004624868:5,056,691...5,060,669 		JBrowse link
G Creb3l1 cAMP responsive element binding protein 3 like 1 enables ISO (PMID:19767743) MGI PMID:19767743 NCBI chrNW_004624767:2,215,850...2,247,470
Ensembl chrNW_004624767:2,215,558...2,247,509 		JBrowse link
G Crebbp CREB binding protein enables ISO (PMID:24939902)
(PMID:15832170), (PMID:22780989)		 UniProt
MGI		 PMID:15832170 PMID:22780989 PMID:24939902 NCBI chrNW_004624824:1,516,481...1,655,364
Ensembl chrNW_004624824:1,517,966...1,655,329 		JBrowse link
G Crtc2 CREB regulated transcription coactivator 2 ISO RGD PMID:21826657 RGD:9685171 NCBI chrNW_004624885:3,265,079...3,276,594
Ensembl chrNW_004624885:3,264,983...3,277,459 		JBrowse link
G Crx cone-rod homeobox enables ISO (PMID:14613968) MGI PMID:14613968 NCBI chrNW_004624832:6,103,530...6,108,129
Ensembl chrNW_004624832:6,104,229...6,108,146 		JBrowse link
G Csnk2b casein kinase 2 beta enables ISO (PMID:25519132) MGI PMID:25519132 NCBI chrNW_004624754:24,533,134...24,538,233 JBrowse link
G Ctbp1 C-terminal binding protein 1 enables ISO (PMID:17392792) MGI PMID:17392792 NCBI chrNW_004624755:25,998,524...26,021,223
Ensembl chrNW_004624755:25,999,713...26,021,331 		JBrowse link
G Ctbp2 C-terminal binding protein 2 enables ISO (PMID:23775127) MGI PMID:23775127 NCBI chrNW_004624737:22,135,046...22,166,580
Ensembl chrNW_004624737:22,003,871...22,165,257 		JBrowse link
G Ctcf CCCTC-binding factor enables ISO (PMID:22780989), (PMID:23804403), (PMID:24105743) MGI PMID:22780989 PMID:23804403 PMID:24105743 NCBI chrNW_004624746:18,705,017...18,760,345
Ensembl chrNW_004624746:18,706,663...18,760,203 		JBrowse link
G Ctnnb1 catenin beta 1 enables IEA Ensembl GO_REF:0000107 NCBI chrNW_004624730:77,876,361...77,887,228
Ensembl chrNW_004624730:77,875,257...77,887,234 		JBrowse link
G Cux1 cut like homeobox 1 enables ISO (PMID:15994318) MGI PMID:15994318 NCBI chrNW_004624740:15,289,616...15,664,090
Ensembl chrNW_004624740:15,287,421...15,664,077 		JBrowse link
G Ddx1 DEAD-box helicase 1 enables ISO (PMID:19058135) UniProt PMID:19058135 NCBI chrNW_004624865:898,850...927,375
Ensembl chrNW_004624865:898,850...928,091 		JBrowse link
G Ddx11 DEAD/H-box helicase 11 enables ISO (PMID:20124417), (PMID:26089203), (PMID:27477908)
(PMID:26503245)		 UniProt PMID:20124417 PMID:26089203 PMID:26503245 PMID:27477908 NCBI chrNW_004624828:269,444...301,899
Ensembl chrNW_004624828:269,843...302,301 		JBrowse link
G Dhx30 DExH-box helicase 30 enables ISO (PMID:18063578) UniProt PMID:18063578 NCBI chrNW_004624730:73,656,378...73,685,863
Ensembl chrNW_004624730:73,656,361...73,681,999 		JBrowse link
G Dlx1 distal-less homeobox 1 enables IEA Ensembl GO_REF:0000107 NCBI chrNW_004624787:9,514,170...9,519,309
Ensembl chrNW_004624787:9,514,573...9,519,724 		JBrowse link
G Dlx2 distal-less homeobox 2 enables ISO (PMID:14769946) MGI PMID:14769946 NCBI chrNW_004624787:9,528,942...9,532,252
Ensembl chrNW_004624787:9,530,034...9,533,109 		JBrowse link
G Dlx3 distal-less homeobox 3 enables ISO (PMID:22351765) MGI PMID:22351765 NCBI chrNW_004624795:6,014,044...6,018,819
Ensembl chrNW_004624795:6,015,523...6,018,684 		JBrowse link
G Dmrt1 doublesex and mab-3 related transcription factor 1 enables ISO (PMID:23473982) MGI PMID:23473982 NCBI chrNW_004624736:5,525,417...5,641,612
Ensembl chrNW_004624736:5,525,408...5,645,636 		JBrowse link
G Dnajc2 DnaJ heat shock protein family (Hsp40) member C2 enables IEA Ensembl GO_REF:0000107 NCBI chrNW_004624739:26,018,209...26,045,781
Ensembl chrNW_004624739:26,018,247...26,045,738 		JBrowse link
G Dnmt1 DNA methyltransferase 1 enables IEA UniProt
InterPro		 GO_REF:0000002 GO_REF:0000104 NCBI chrNW_004624828:2,316,042...2,358,866
Ensembl chrNW_004624828:2,315,251...2,358,711 		JBrowse link
G Dnmt3a DNA methyltransferase 3 alpha ISO RGD PMID:23671328 RGD:9590112 NCBI chrNW_004624738:7,481,084...7,581,332
Ensembl chrNW_004624738:7,485,842...7,581,056 		JBrowse link
G Dnmt3b DNA methyltransferase 3 beta ISO RGD PMID:23671328 RGD:9590112 NCBI chrNW_004624842:6,450,972...6,505,929
Ensembl chrNW_004624842:6,450,852...6,475,785 		JBrowse link
G Dppa2 developmental pluripotency associated 2 enables IEA TreeGrafter
InterPro		 GO_REF:0000002 GO_REF:0000118 NCBI chrNW_004624731:39,749,759...39,757,389 JBrowse link
G Dppa4 developmental pluripotency associated 4 enables IEA InterPro
TreeGrafter		 GO_REF:0000002 GO_REF:0000118 NCBI chrNW_004624731:39,723,840...39,736,652 JBrowse link
G E2f4 E2F transcription factor 4 enables ISO (PMID:22780989) MGI PMID:22780989 NCBI chrNW_004624746:19,117,582...19,124,261
Ensembl chrNW_004624746:19,118,393...19,124,196 		JBrowse link
G Ebf2 EBF transcription factor 2 enables ISO (PMID:23499423) MGI PMID:23499423 NCBI chrNW_004624758:20,791,824...20,989,836
Ensembl chrNW_004624758:20,794,698...20,989,306 		JBrowse link
G Ecsit ECSIT signaling integrator enables ISO (PMID:14633973) MGI PMID:14633973 NCBI chrNW_004624828:3,264,054...3,276,270
Ensembl chrNW_004624828:3,264,149...3,269,030 		JBrowse link
G Eed embryonic ectoderm development enables ISO (PMID:16687444), (PMID:24105743) RGD
MGI		 PMID:16687444 PMID:23354331 PMID:24105743 RGD:9588305 NCBI chrNW_004624845:3,679,163...3,712,153
Ensembl chrNW_004624845:3,679,096...3,712,176 		JBrowse link
G Egfr epidermal growth factor receptor enables ISO (PMID:20551055) UniProt PMID:20551055 NCBI chrNW_004624740:584,133...713,205
Ensembl chrNW_004624740:589,606...713,271 		JBrowse link
G Egr2 early growth response 2 enables ISO (PMID:17938205) UniProt PMID:17938205 NCBI chrNW_004624791:953,009...959,656
Ensembl chrNW_004624791:955,161...959,791 		JBrowse link
G Elk1 ETS transcription factor ELK1 ISO RGD PMID:18768922 RGD:7488907 NCBI chrNW_004624978:194,985...208,105
Ensembl chrNW_004624978:194,992...208,103 		JBrowse link
G Elk4 ETS transcription factor ELK4 enables ISO (PMID:22722849) UniProt PMID:22722849 NCBI chrNW_004624807:5,603,815...5,620,856
Ensembl chrNW_004624807:5,604,183...5,617,319 		JBrowse link
G Eomes eomesodermin enables ISO (PMID:21822279) MGI PMID:21822279 NCBI chrNW_004624788:5,550,569...5,557,342
Ensembl chrNW_004624788:5,550,445...5,557,321 		JBrowse link
G Ep400 E1A binding protein p400 enables IEA
ISO		 TreeGrafter
RGD		 PMID:12776177 GO_REF:0000118 RGD:1302285 NCBI chrNW_004624747:27,709,215...27,815,642
Ensembl chrNW_004624747:27,709,216...27,815,641 		JBrowse link
G Epop elongin BC and polycomb repressive complex 2 associated protein enables ISO (PMID:27863225), (PMID:27863226) UniProt PMID:27863225 PMID:27863226 NCBI chrNW_004624795:3,995,647...3,998,419
Ensembl chrNW_004624795:3,996,084...3,997,046 		JBrowse link
G Ercc6 ERCC excision repair 6, chromatin remodeling factor enables ISO (PMID:25820262)
(PMID:26620705)		 UniProt PMID:25820262 PMID:26620705 NCBI chrNW_004624928:458,651...532,201
Ensembl chrNW_004624928:463,279...530,115 		JBrowse link
G Erg ETS transcription factor ERG enables ISO (PMID:22932696) MGI PMID:22932696 NCBI chrNW_004624745:25,239,356...25,457,533
Ensembl chrNW_004624745:25,294,832...25,459,683 		JBrowse link
G Esr1 estrogen receptor 1 enables ISO (PMID:17505058), (PMID:20080953)
(PMID:18202148), (PMID:24332041)		 UniProt
MGI		 PMID:17505058 PMID:18202148 PMID:20080953 PMID:24332041 NCBI chrNW_004624785:6,164,507...6,601,302
Ensembl chrNW_004624785:6,164,379...6,601,326 		JBrowse link
G Exo1 exonuclease 1 enables ISO (PMID:14716311) MGI PMID:14716311 NCBI chrNW_004624771:12,215,957...12,230,908 JBrowse link
G Eya3 EYA transcriptional coactivator and phosphatase 3 enables ISO (PMID:19008232) MGI PMID:19008232 NCBI chrNW_004624764:11,820,993...11,932,183
Ensembl chrNW_004624764:11,821,609...11,898,144 		JBrowse link
G Ezh1 enhancer of zeste 1 polycomb repressive complex 2 subunit enables ISO
IEA		 RGD
TreeGrafter		 PMID:23932971 GO_REF:0000118 RGD:9587811 NCBI chrNW_004624795:1,454,361...1,470,079 JBrowse link
G Ezh2 enhancer of zeste 2 polycomb repressive complex 2 subunit enables ISO
IEA		 RGD
TreeGrafter		 PMID:23932971 GO_REF:0000118 RGD:9587811 NCBI chrNW_004624800:6,781,848...6,874,221
Ensembl chrNW_004624800:6,802,901...6,874,196 		JBrowse link
G Faap24 FA core complex associated protein 24 enables IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004624794:7,862,653...7,866,065
Ensembl chrNW_004624794:7,862,139...7,868,373 		JBrowse link
G Fancm FA complementation group M enables ISO (PMID:20347429) UniProt PMID:20347429 NCBI chrNW_004624731:23,342,313...23,391,877
Ensembl chrNW_004624731:23,340,460...23,392,040 		JBrowse link
G Fezf2 FEZ family zinc finger 2 enables ISO (PMID:24997765) MGI PMID:24997765 NCBI chrNW_004624888:3,462,132...3,467,701
Ensembl chrNW_004624888:3,462,233...3,468,293 		JBrowse link
G Fli1 Fli-1 proto-oncogene, ETS transcription factor enables ISO (PMID:16757682) MGI PMID:16757682 NCBI chrNW_004624812:3,004,631...3,138,901
Ensembl chrNW_004624812:3,004,628...3,139,101 		JBrowse link
G Fmr1 Fragile X messenger ribonucleoprotein 1 enables ISO (PMID:24813610) UniProt PMID:24813610 NCBI chrNW_004624883:645,524...681,705
Ensembl chrNW_004624883:645,449...682,292 		JBrowse link
G Fos Fos proto-oncogene, AP-1 transcription factor subunit enables IEA Ensembl GO_REF:0000107 NCBI chrNW_004624734:26,424,053...26,427,431
Ensembl chrNW_004624734:26,423,079...26,427,732 		JBrowse link
G Fosl2 FOS like 2, AP-1 transcription factor subunit enables ISO (PMID:25547114) MGI PMID:25547114 NCBI chrNW_004624738:10,370,479...10,391,623
Ensembl chrNW_004624738:10,370,103...10,391,623 		JBrowse link
G Foxa1 forkhead box A1 enables ISO (PMID:22780989) MGI PMID:22780989 NCBI chrNW_004624955:234,289...239,541
Ensembl chrNW_004624955:231,506...239,508 		JBrowse link
G Foxa2 forkhead box A2 enables ISO (PMID:22780989) MGI PMID:22780989 NCBI chrNW_004624741:22,645,580...22,649,722
Ensembl chrNW_004624741:22,645,519...22,649,854 		JBrowse link
G Foxn4 forkhead box N4 enables ISO (PMID:22323600) UniProt PMID:22323600 NCBI chrNW_004624747:11,122,463...11,149,505
Ensembl chrNW_004624747:11,123,615...11,149,571 		JBrowse link
G Foxp1 forkhead box P1 enables ISO (PMID:18347093) MGI PMID:18347093 NCBI chrNW_004624773:5,543,529...6,076,522
Ensembl chrNW_004624773:5,543,536...5,883,131 		JBrowse link
G Fus FUS RNA binding protein enables ISO (PMID:25453086), (PMID:27731383) UniProt PMID:25453086 PMID:27731383 NCBI chrNW_004624782:14,211,294...14,223,698 JBrowse link
G Gabpa GA binding protein transcription factor subunit alpha enables IEA Ensembl GO_REF:0000107 NCBI chrNW_004624745:13,787,352...13,820,781
Ensembl chrNW_004624745:13,788,288...13,821,599 		JBrowse link
G Gata1 GATA binding protein 1 enables ISO (PMID:17505015), (PMID:19011221) RGD
MGI		 PMID:17505015 PMID:19011221 PMID:22885997 RGD:6892958 NCBI chrNW_004624893:595,948...602,980
Ensembl chrNW_004624893:595,967...602,979 		JBrowse link
G Gata2 GATA binding protein 2 enables ISO (PMID:18184866), (PMID:18779319)
(PMID:19242469)		 MGI PMID:18184866 PMID:18779319 PMID:19242469 NCBI chrNW_004624961:147,685...155,614
Ensembl chrNW_004624961:143,358...154,003 		JBrowse link
G Gata4 GATA binding protein 4 enables ISO (PMID:21379568) MGI PMID:21379568 NCBI chrNW_004624758:25,278,878...25,319,317
Ensembl chrNW_004624758:25,278,874...25,319,318 		JBrowse link
G Gata6 GATA binding protein 6 enables ISO (PMID:16199866) MGI PMID:16199866 NCBI chrNW_004624770:9,772,818...9,799,837
Ensembl chrNW_004624770:9,772,818...9,798,259 		JBrowse link
G Gli1 GLI family zinc finger 1 enables ISO (PMID:19706761)
(PMID:16396903), (PMID:17442700)		 UniProt
MGI		 PMID:16396903 PMID:17442700 PMID:19706761 NCBI chrNW_004624802:10,483,279...10,494,539
Ensembl chrNW_004624802:10,483,219...10,498,609 		JBrowse link
G Gli2 GLI family zinc finger 2 enables ISO (PMID:16396903) MGI PMID:16396903 NCBI chrNW_004624732:24,159,407...24,381,495
Ensembl chrNW_004624732:24,159,312...24,328,452 		JBrowse link
G Gli3 GLI family zinc finger 3 enables ISO (PMID:16396903) MGI PMID:16396903 NCBI chrNW_004624740:18,961,395...19,238,760
Ensembl chrNW_004624740:18,975,596...19,235,900 		JBrowse link
G Glyr1 glyoxylate reductase 1 homolog enables IEA Ensembl GO_REF:0000107 NCBI chrNW_004624824:2,655,909...2,692,546
Ensembl chrNW_004624824:2,655,909...2,692,522 		JBrowse link
G Gmnn geminin DNA replication inhibitor enables ISO (PMID:11125146) CAFA PMID:11125146 NCBI chrNW_004624756:2,268,304...2,335,021
Ensembl chrNW_004624756:2,268,304...2,278,129 		JBrowse link
G Gper1 G protein-coupled estrogen receptor 1 enables IEA Ensembl GO_REF:0000107 NCBI chrNW_004624740:26,627,560...26,632,483
Ensembl chrNW_004624740:26,627,473...26,632,027 		JBrowse link
G Grhl2 grainyhead like transcription factor 2 enables ISO (PMID:25758223) MGI PMID:25758223 NCBI chrNW_004624763:18,784,815...18,916,358
Ensembl chrNW_004624763:18,784,187...18,916,358 		JBrowse link
G Grwd1 glutamate rich WD repeat containing 1 enables ISO (PMID:25990725) UniProt PMID:25990725 NCBI chrNW_004624832:5,354,259...5,360,171
Ensembl chrNW_004624832:5,354,176...5,360,233 		JBrowse link
G Gtf2h1 general transcription factor IIH subunit 1 ISO RGD PMID:17242204 RGD:9681447 NCBI chrNW_004624766:9,807,973...9,848,167
Ensembl chrNW_004624766:9,808,170...9,848,173 		JBrowse link
G Hcfc1 host cell factor C1 enables ISO (PMID:21285374) UniProt PMID:21285374 NCBI chrNW_004624946:571,776...591,543
Ensembl chrNW_004624946:571,774...590,247 		JBrowse link
G Hdac1 histone deacetylase 1 enables ISO (PMID:15608638), (PMID:16109736), (PMID:16678101), (PMID:17392792), (PMID:17905753) RGD
MGI		 PMID:15608638 PMID:16109736 PMID:16678101 PMID:17392792 PMID:17905753 More... RGD:9590112 NCBI chrNW_004624764:15,510,655...15,552,020
Ensembl chrNW_004624764:15,510,866...15,552,025 		JBrowse link
G Hdac2 histone deacetylase 2 enables ISO (PMID:17392792), (PMID:18754010) MGI PMID:17392792 PMID:18754010 NCBI chrNW_004624856:4,834,197...4,861,546
Ensembl chrNW_004624856:4,834,217...4,861,592 		JBrowse link
G Hdac3 histone deacetylase 3 enables ISO (PMID:16569215), (PMID:18417529)
(PMID:15832170), (PMID:24565863)		 RGD
UniProt
MGI		 PMID:15832170 PMID:16569215 PMID:18417529 PMID:22679019 PMID:24565863 RGD:9590167 NCBI chrNW_004624774:845,970...864,080
Ensembl chrNW_004624774:845,358...863,809 		JBrowse link
G Hdac4 histone deacetylase 4 enables ISO (PMID:24768298) MGI PMID:24768298 NCBI chrNW_004624847:3,846,196...4,101,537
Ensembl chrNW_004624847:3,845,858...4,101,487 		JBrowse link
G Hdac5 histone deacetylase 5 ISO RGD PMID:19638401 RGD:9590153 NCBI chrNW_004624795:814,134...838,031
Ensembl chrNW_004624795:818,154...837,961 		JBrowse link
G Hdac7 histone deacetylase 7 enables ISO (PMID:16109736) MGI PMID:16109736 NCBI chrNW_004624816:4,441,543...4,476,520
Ensembl chrNW_004624816:4,441,849...4,475,437 		JBrowse link
G Hdac8 histone deacetylase 8 ISO RGD PMID:28559304 RGD:13208603 NCBI chrNW_004624903:2,620,571...2,852,247
Ensembl chrNW_004624903:2,620,501...2,852,822 		JBrowse link
G Hells helicase, lymphoid specific enables IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004624737:5,892,705...5,954,364 JBrowse link
G Hes1 hes family bHLH transcription factor 1 ISO RGD PMID:15607978 RGD:9685371 NCBI chrNW_004624730:63,563,848...63,566,303
Ensembl chrNW_004624730:63,563,754...63,566,781 		JBrowse link
G Hes5 hes family bHLH transcription factor 5 enables ISO PMID:17006542 MGI PMID:17006542 RGD:8554845 NCBI chrNW_004624818:7,516,279...7,517,654
Ensembl chrNW_004624818:7,516,189...7,518,734 		JBrowse link
G Hesx1 HESX homeobox 1 enables ISO (PMID:16678101) MGI PMID:16678101 NCBI chrNW_004624822:74,344...102,484
Ensembl chrNW_004624822:74,373...101,828 		JBrowse link
G Hhex hematopoietically expressed homeobox enables ISO (PMID:16764824) MGI PMID:16764824 NCBI chrNW_004624737:3,897,907...3,903,828
Ensembl chrNW_004624737:3,897,871...3,904,083 		JBrowse link
G Hinfp histone H4 transcription factor enables ISO (PMID:17767158) MGI PMID:17767158 NCBI chrNW_004624784:14,502,600...14,514,012
Ensembl chrNW_004624784:14,502,554...14,513,567 		JBrowse link
G Hmga1 high mobility group AT-hook 1 enables ISO (PMID:19389484) BHF-UCL PMID:19389484 NCBI chrNW_004624754:22,888,052...22,900,685
Ensembl chrNW_004624754:22,892,226...22,898,807 		JBrowse link
G Hmgn1 high mobility group nucleosome binding domain 1 enables IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004624745:24,659,391...24,665,874
Ensembl chrNW_004624745:24,659,334...24,665,221 		JBrowse link
G Hmgn2 high mobility group nucleosomal binding domain 2 enables IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004624764:10,477,276...10,480,980 JBrowse link
G Hmgn3 high mobility group nucleosomal binding domain 3 enables IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004624819:5,831,031...5,860,249
Ensembl chrNW_004624819:5,830,311...5,860,141 		JBrowse link
G Hmgn5 high mobility group nucleosome binding domain 5 enables ISO (PMID:10692437) MGI PMID:10692437 NCBI chrNW_004624836:30,417...38,253 JBrowse link
G Hnf1a HNF1 homeobox A enables ISO (PMID:22780989) MGI PMID:22780989 NCBI chrNW_004624747:12,717,713...12,746,040
Ensembl chrNW_004624747:12,717,707...12,746,724 		JBrowse link
G Hnf4a hepatocyte nuclear factor 4 alpha enables IEA Ensembl GO_REF:0000107 NCBI chrNW_004624790:10,039,344...10,065,167
Ensembl chrNW_004624790:10,038,999...10,100,649 		JBrowse link
G Hnrnpd heterogeneous nuclear ribonucleoprotein D ISO RGD PMID:18413351 RGD:10041067 NCBI chrNW_004624757:8,532,373...8,549,840
Ensembl chrNW_004624757:8,531,601...8,549,835 		JBrowse link
G Hnrnpu heterogeneous nuclear ribonucleoprotein U enables ISO (PMID:11909954), (PMID:28622508), (PMID:9405365) UniProt PMID:9405365 PMID:11909954 PMID:28622508 NCBI chrNW_004624771:14,756,088...14,766,106
Ensembl chrNW_004624771:14,756,100...14,765,832 		JBrowse link
G Hoxc13 homeobox C13 enables ISO (PMID:21191399) MGI PMID:21191399 NCBI chrNW_004624904:1,993,854...2,001,623
Ensembl chrNW_004624904:1,993,854...2,000,500 		JBrowse link
G Hoxd10 homeobox D10 enables ISO (PMID:16672333) MGI PMID:16672333 NCBI chrNW_004624787:13,256,600...13,260,664
Ensembl chrNW_004624787:13,257,387...13,262,685 		JBrowse link
G Hoxd13 homeobox D13 enables ISO (PMID:16672333) MGI PMID:16672333 NCBI chrNW_004624787:13,233,932...13,237,210
Ensembl chrNW_004624787:13,233,932...13,238,503 		JBrowse link
G Hsf1 heat shock transcription factor 1 enables ISO (PMID:21690297) MGI PMID:21690297 NCBI chrNW_004624735:12,536,818...12,562,643
Ensembl chrNW_004624735:12,537,128...12,562,644 		JBrowse link
G Ift74 intraflagellar transport 74 enables ISO (PMID:20545763) MGI PMID:20545763 NCBI chrNW_004624736:31,188,963...31,308,872
Ensembl chrNW_004624736:31,188,987...31,306,815 		JBrowse link
G Ikzf5 IKAROS family zinc finger 5 enables IEA Ensembl GO_REF:0000107 NCBI chrNW_004624737:23,999,688...24,016,903 JBrowse link
G Ing5 inhibitor of growth family member 5 enables IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004624847:5,648,199...5,659,038
Ensembl chrNW_004624847:5,648,233...5,662,044 		JBrowse link
G Isl1 ISL LIM homeobox 1 enables IEA Ensembl GO_REF:0000107 NCBI chrNW_004624759:7,996,177...8,006,281
Ensembl chrNW_004624759:7,994,242...8,006,311 		JBrowse link
G Jarid2 jumonji and AT-rich interaction domain containing 2 enables ISO (PMID:20064375), (PMID:20064376) UniProt PMID:20064375 PMID:20064376 NCBI chrNW_004624756:10,932,148...11,079,609
Ensembl chrNW_004624756:10,933,717...11,199,077 		JBrowse link
G Jdp2 Jun dimerization protein 2 enables ISO (PMID:17464331) MGI PMID:17464331 NCBI chrNW_004624734:26,228,147...26,276,485
Ensembl chrNW_004624734:26,224,961...26,276,612 		JBrowse link
G Jun Jun proto-oncogene, AP-1 transcription factor subunit enables ISO (PMID:20442316), (PMID:23918802) MGI PMID:20442316 PMID:23918802 NCBI chrNW_004624862:1,537,886...1,540,633
Ensembl chrNW_004624862:1,538,455...1,539,426 		JBrowse link
G Kat2a lysine acetyltransferase 2A enables ISO (PMID:16109736), (PMID:23637336)
(PMID:29211711)		 RGD
MGI
UniProt		 PMID:16109736 PMID:21697636 PMID:23637336 PMID:29211711 RGD:8693753 NCBI chrNW_004624795:1,782,367...1,787,408
Ensembl chrNW_004624795:1,782,366...1,788,951 		JBrowse link
G Kat2b lysine acetyltransferase 2B enables ISO (PMID:16245309) RGD
UniProt		 PMID:16245309 PMID:20870727 RGD:9590266 NCBI chrNW_004624821:5,387,212...5,489,013 JBrowse link
G Kat5 lysine acetyltransferase 5 enables IEA
ISO		 UniProt
RGD		 PMID:12776177 GO_REF:0000117 RGD:1302285 NCBI chrNW_004624767:20,668,759...20,675,367
Ensembl chrNW_004624767:20,666,763...20,675,164 		JBrowse link
G Kat6a lysine acetyltransferase 6A enables IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004624780:1,237,326...1,378,718
Ensembl chrNW_004624780:1,240,292...1,376,072 		JBrowse link
G Kat6b lysine acetyltransferase 6B enables IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004624754:8,204,266...8,391,328
Ensembl chrNW_004624754:8,204,943...8,392,724 		JBrowse link
G Kat7 lysine acetyltransferase 7 enables IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004624795:5,859,974...5,892,519
Ensembl chrNW_004624795:5,859,443...5,892,527 		JBrowse link
G Kat8 lysine acetyltransferase 8 enables IEA UniProt GO_REF:0000117 NCBI chrNW_004624782:14,157,905...14,169,231
Ensembl chrNW_004624782:14,157,823...14,169,231 		JBrowse link
G Kdm1a lysine demethylase 1A enables ISO
IEA		 RGD
TreeGrafter		 PMID:23221071 GO_REF:0000118 RGD:9588312 NCBI chrNW_004624764:7,664,550...7,742,494 JBrowse link
G Kdm3a lysine demethylase 3A enables IEA Ensembl GO_REF:0000107 NCBI chrNW_004624749:16,784,538...16,829,784
Ensembl chrNW_004624749:16,784,538...16,829,365 		JBrowse link
G Kdm4c lysine demethylase 4C ISO RGD PMID:24747049 RGD:9587433 NCBI chrNW_004624736:11,254,125...11,711,498
Ensembl chrNW_004624736:11,382,598...11,711,536 		JBrowse link
G Kdm5a lysine demethylase 5A enables ISO (PMID:20064375) UniProt PMID:20064375 NCBI chrNW_004624735:8,473,778...8,631,964
Ensembl chrNW_004624735:8,530,016...8,631,954
Ensembl chrNW_004624735:8,530,016...8,631,954 		JBrowse link
G Kdm6b lysine demethylase 6B ISO RGD PMID:23932971 RGD:9587811 NCBI chrNW_004624786:10,413,670...10,435,118
Ensembl chrNW_004624786:10,425,816...10,433,806 		JBrowse link
G Kdm8 lysine demethylase 8 enables ISO (PMID:20457893)
(PMID:26334721)		 UniProt
MGI		 PMID:20457893 PMID:26334721 NCBI chrNW_004624782:11,884,847...11,903,944
Ensembl chrNW_004624782:11,884,631...11,903,947 		JBrowse link
G Klf14 KLF transcription factor 14 enables ISO (PMID:24759103) MGI PMID:24759103 NCBI chrNW_004624783:5,593,860...5,595,803
Ensembl chrNW_004624783:5,593,860...5,594,855 		JBrowse link
G Klhdc3 kelch domain containing 3 enables IEA TreeGrafter
InterPro
Ensembl		 GO_REF:0000002 GO_REF:0000107 GO_REF:0000118 NCBI chrNW_004624754:16,479,389...16,485,573
Ensembl chrNW_004624754:16,479,389...16,483,824 		JBrowse link
G Kmt2a lysine methyltransferase 2A enables ISO (PMID:15640349) MGI PMID:15640349 NCBI chrNW_004624784:13,824,507...13,912,672
Ensembl chrNW_004624784:13,824,541...13,908,077 		JBrowse link
G Kmt5b lysine methyltransferase 5B enables ISO (PMID:28114273) UniProt PMID:28114273 NCBI chrNW_004624767:18,654,682...18,716,087
Ensembl chrNW_004624767:18,655,193...18,716,252 		JBrowse link
G Kmt5c lysine methyltransferase 5C enables ISO (PMID:28114273) UniProt PMID:28114273 NCBI chrNW_004624832:1,945,194...1,951,016
Ensembl chrNW_004624832:1,945,193...1,951,247 		JBrowse link
G L3mbtl1 L3MBTL histone methyl-lysine binding protein 1 enables IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004624790:10,762,340...10,799,228
Ensembl chrNW_004624790:10,761,632...10,791,891 		JBrowse link
G L3mbtl2 L3MBTL histone methyl-lysine binding protein 2 enables IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004624752:7,291,888...7,309,379
Ensembl chrNW_004624752:7,292,852...7,309,856 		JBrowse link
G L3mbtl3 L3MBTL histone methyl-lysine binding protein 3 enables IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004624753:4,304,787...4,415,684
Ensembl chrNW_004624753:4,326,748...4,414,957 		JBrowse link
G Lcor ligand dependent nuclear receptor corepressor enables ISO (PMID:17392792) MGI PMID:17392792 NCBI chrNW_004624737:8,302,285...8,456,247
Ensembl chrNW_004624737:8,369,522...8,446,114 		JBrowse link
G Ldb1 LIM domain binding 1 enables IEA Ensembl GO_REF:0000107 NCBI chrNW_004624831:1,573,058...1,584,861
Ensembl chrNW_004624831:1,571,942...1,584,775 		JBrowse link
G Lef1 lymphoid enhancer binding factor 1 enables ISO (PMID:15024079), (PMID:16678101), (PMID:16818445), (PMID:18202148) MGI PMID:15024079 PMID:16678101 PMID:16818445 PMID:18202148 NCBI chrNW_004624830:1,320,034...1,422,774
Ensembl chrNW_004624830:1,321,387...1,424,389 		JBrowse link
G Lhx2 LIM homeobox 2 enables ISO (PMID:19146846), (PMID:24012369) MGI PMID:19146846 PMID:24012369 NCBI chrNW_004624760:10,951,837...10,982,592 JBrowse link
G Lmo2 LIM domain only 2 enables ISO (PMID:18184866), (PMID:19011221) MGI PMID:18184866 PMID:19011221 NCBI chrNW_004624767:13,245,783...13,257,322
Ensembl chrNW_004624767:13,245,984...13,257,440 		JBrowse link
G LOC101697775 sex comb on midleg-like protein 1 enables IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004624734:31,534,994...31,535,965 JBrowse link
G LOC101699502 M-phase phosphoprotein 8 enables IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004625119:18...10,401 JBrowse link
G LOC101702959 metastasis-associated protein MTA3-like enables IEA InterPro GO_REF:0000002 NCBI chrNW_004624737:856,346...857,976 JBrowse link
G LOC101704396 chromodomain-helicase-DNA-binding protein 3 enables IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004624786:10,438,023...10,495,343
Ensembl chrNW_004624786:10,438,174...10,439,886
Ensembl chrNW_004624786:10,438,174...10,439,886 		JBrowse link
G LOC101704911 recombination repair protein 1-like enables IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004624859:252,734...260,277 JBrowse link
G LOC101705414 histone PARylation factor 1 enables ISO (PMID:32939087) UniProt PMID:32939087 NCBI chrNW_004624769:1,239,399...1,261,770
Ensembl chrNW_004624769:1,239,455...1,261,901 		JBrowse link
G LOC101705652 protein AF-9-like enables IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004624859:277,809...279,689 JBrowse link
G LOC101706029 WW domain-containing adapter protein with coiled-coil-like enables IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004624764:10,163,785...10,165,559 JBrowse link
G LOC101706296 core histone macro-H2A.1 enables IEA Ensembl GO_REF:0000107 NCBI chrNW_004624733:11,650,067...11,714,399
Ensembl chrNW_004624733:11,650,537...11,715,999 		JBrowse link
G LOC101711575 nucleophosmin-like enables IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004624781:6,286,953...6,291,628 JBrowse link
G LOC101712333 high mobility group nucleosome-binding domain-containing protein 3 enables IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004624814:9,437,476...9,437,829 JBrowse link
G LOC101712482 non-histone chromosomal protein HMG-14 enables IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004624836:2,459,602...2,459,930 JBrowse link
G LOC101712616 polyhomeotic-like protein 1 enables IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004624764:20,089,720...20,113,691 JBrowse link
G LOC101719834 non-histone chromosomal protein HMG-17 enables IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004624759:2,335,123...2,335,529 JBrowse link
G LOC101721757 metastasis-associated protein MTA1 enables IEA InterPro GO_REF:0000002 NCBI chrNW_004624734:69,203...124,988
Ensembl chrNW_004624734:69,748...104,248 		JBrowse link
G LOC101726503 high mobility group nucleosome-binding domain-containing protein 4 enables IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004624756:332,782...340,670 JBrowse link
G LOC106007509 NF-kappa-B-activating protein-like enables IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004625439:20...5,920 JBrowse link
G Lrwd1 leucine rich repeats and WD repeat domain containing 1 enables IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004624740:15,174,170...15,181,341
Ensembl chrNW_004624740:15,174,259...15,181,191 		JBrowse link
G Mapk15 mitogen-activated protein kinase 15 enables ISO (PMID:20733054) UniProt PMID:20733054 NCBI chrNW_004624735:13,049,509...13,077,509
Ensembl chrNW_004624735:13,047,125...13,056,308 		JBrowse link
G Maz MYC associated zinc finger protein enables ISO (PMID:18710939), (PMID:19268698) MGI PMID:18710939 PMID:19268698 NCBI chrNW_004624782:13,395,273...13,398,250 JBrowse link
G Mbd1 methyl-CpG binding domain protein 1 ISO RGD PMID:18689796 RGD:9588634 NCBI chrNW_004624778:13,892,179...13,907,576
Ensembl chrNW_004624778:13,896,447...13,907,656 		JBrowse link
G Mbd2 methyl-CpG binding domain protein 2 enables ISO (PMID:16608912), (PMID:18644872) MGI PMID:16608912 PMID:18644872 NCBI chrNW_004624778:17,880,480...17,959,879
Ensembl chrNW_004624778:17,883,933...17,959,880 		JBrowse link
G Mbd5 methyl-CpG binding domain protein 5 enables IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004624866:1,003,279...1,162,545
Ensembl chrNW_004624866:1,105,616...1,162,288 		JBrowse link
G Mbd6 methyl-CpG binding domain protein 6 enables IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004624802:10,428,782...10,437,992
Ensembl chrNW_004624802:10,428,782...10,437,777 		JBrowse link
G Mbtd1 mbt domain containing 1 enables IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004624795:6,900,281...6,966,249
Ensembl chrNW_004624795:6,900,281...6,960,903 		JBrowse link
G Mcm3ap minichromosome maintenance complex component 3 associated protein enables ISO (PMID:23652018) UniProt PMID:23652018 NCBI chrNW_004624745:31,328,802...31,376,173
Ensembl chrNW_004624745:31,325,526...31,375,368 		JBrowse link
G Mcm8 minichromosome maintenance 8 homologous recombination repair factor enables ISO (PMID:23401855) UniProt PMID:23401855 NCBI chrNW_004624741:6,787,555...6,826,033
Ensembl chrNW_004624741:6,787,578...6,827,188 		JBrowse link
G Mcm9 minichromosome maintenance 9 homologous recombination repair factor enables ISO (PMID:23401855), (PMID:26300262) UniProt PMID:23401855 PMID:26300262 NCBI chrNW_004624798:11,287,882...11,370,040
Ensembl chrNW_004624798:11,290,074...11,367,495 		JBrowse link
G Mcmbp minichromosome maintenance complex binding protein enables IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004624737:26,929,067...27,000,296 JBrowse link
G Mecp2 methyl-CpG binding protein 2 enables ISO
IEA		 RGD
TreeGrafter		 PMID:23688924 GO_REF:0000118 RGD:9589062 NCBI chrNW_004624946:620,581...685,339
Ensembl chrNW_004624946:628,284...685,246 		JBrowse link
G Med1 mediator complex subunit 1 enables ISO (PMID:12446761), (PMID:20720539)
(PMID:17641689)		 RGD
MGI
UniProt		 PMID:12446761 PMID:17641689 PMID:20378540 PMID:20720539 RGD:9681556 NCBI chrNW_004624795:3,572,025...3,605,675
Ensembl chrNW_004624795:3,572,266...3,607,126 		JBrowse link
G Med12 mediator complex subunit 12 enables ISO (PMID:20720539) MGI PMID:20720539 NCBI chrNW_004624903:1,412,346...1,436,474
Ensembl chrNW_004624903:1,412,474...1,436,474 		JBrowse link
G Mef2a myocyte enhancer factor 2A enables ISO (PMID:16407236), (PMID:18198354), (PMID:21379568)
(PMID:21468593)		 MGI
UniProt		 PMID:16407236 PMID:18198354 PMID:21379568 PMID:21468593 NCBI chrNW_004624768:4,701,734...4,852,833
Ensembl chrNW_004624768:4,704,799...4,796,719 		JBrowse link
G Mef2c myocyte enhancer factor 2C enables ISO (PMID:18086704) MGI PMID:18086704 NCBI chrNW_004624743:8,072,871...8,235,174
Ensembl chrNW_004624743:8,072,673...8,235,252 		JBrowse link
G Meiob meiosis specific with OB-fold enables ISO (PMID:24240703)
(PMID:24068956)		 UniProt PMID:24068956 PMID:24240703 NCBI chrNW_004624913:389,772...426,196
Ensembl chrNW_004624913:394,154...426,196 		JBrowse link
G Meis1 Meis homeobox 1 enables ISO (PMID:19268698) MGI PMID:19268698 NCBI chrNW_004624762:6,894,332...7,031,354
Ensembl chrNW_004624762:6,873,913...7,031,346 		JBrowse link
G Meis3 Meis homeobox 3 enables ISO (PMID:21059917) MGI PMID:21059917 NCBI chrNW_004624832:6,369,248...6,379,754
Ensembl chrNW_004624832:6,369,259...6,377,268 		JBrowse link
G Men1 menin 1 enables ISO
IEA		 RGD
TreeGrafter		 PMID:24157940 GO_REF:0000118 RGD:9589069 NCBI chrNW_004624767:21,579,084...21,585,380
Ensembl chrNW_004624767:21,579,103...21,585,373 		JBrowse link
G Meox1 mesenchyme homeobox 1 enables ISO (PMID:15024065) MGI PMID:15024065 NCBI chrNW_004624795:1,032,278...1,041,635
Ensembl chrNW_004624795:1,032,546...1,040,007 		JBrowse link
G Mitf melanocyte inducing transcription factor enables ISO (PMID:15729346) MGI PMID:15729346 NCBI chrNW_004624773:4,346,072...4,561,218
Ensembl chrNW_004624773:4,346,007...4,562,969 		JBrowse link
G Mkrn1 makorin ring finger protein 1 enables ISO (PMID:15522233) MGI PMID:15522233 NCBI chrNW_004624765:20,608,443...20,631,712
Ensembl chrNW_004624765:20,605,090...20,631,776 		JBrowse link
G Mlh1 mutL homolog 1 enables ISO (PMID:26300262)
(PMID:14716311)		 UniProt
MGI		 PMID:14716311 PMID:26300262 NCBI chrNW_004624788:15,110,436...15,160,462
Ensembl chrNW_004624788:15,110,658...15,160,535 		JBrowse link
G Mlh3 mutL homolog 3 enables IEA Ensembl GO_REF:0000107 NCBI chrNW_004624734:26,642,800...26,677,187
Ensembl chrNW_004624734:26,642,946...26,674,315 		JBrowse link
G Mllt1 MLLT1 super elongation complex subunit enables IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004624828:4,055,244...4,110,246
Ensembl chrNW_004624828:4,093,502...4,110,350 		JBrowse link
G Mllt10 MLLT10 histone lysine methyltransferase DOT1L cofactor enables ISO (PMID:26439302) UniProt PMID:26439302 NCBI chrNW_004624796:6,762,304...6,949,126
Ensembl chrNW_004624796:6,762,118...6,948,816 		JBrowse link
G Mllt3 MLLT3 super elongation complex subunit enables IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004624736:24,298,750...24,586,185 JBrowse link
G Mnt MAX network transcriptional repressor enables ISO (PMID:16103876) MGI PMID:16103876 NCBI chrNW_004624786:5,039,699...5,057,789
Ensembl chrNW_004624786:5,039,699...5,055,491 		JBrowse link
G Morc2 MORC family CW-type zinc finger 2 enables ISO (PMID:23260667), (PMID:29211708) UniProt PMID:23260667 PMID:29211708 NCBI chrNW_004624747:7,386,052...7,426,257
Ensembl chrNW_004624747:7,384,270...7,426,285 		JBrowse link
G Morf4l1 mortality factor 4 like 1 enables ISO (PMID:15367658) MGI PMID:15367658 NCBI chrNW_004624941:50,651...71,380
Ensembl chrNW_004624941:50,840...70,767 		JBrowse link
G Mphosph8 M-phase phosphoprotein 8 enables IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004624776:17,998,779...18,030,027 JBrowse link
G Mrnip MRN complex interacting protein enables IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004624733:42,699,950...42,718,623 JBrowse link
G Msgn1 mesogenin 1 enables IEA Ensembl GO_REF:0000107 NCBI chrNW_004624738:756,679...757,278
Ensembl chrNW_004624738:756,679...757,258 		JBrowse link
G Msh2 mutS homolog 2 enables IEA Ensembl GO_REF:0000107 NCBI chrNW_004624738:28,780,596...28,861,523
Ensembl chrNW_004624738:28,780,614...28,861,704 		JBrowse link
G Msh6 mutS homolog 6 enables IEA Ensembl GO_REF:0000107 NCBI chrNW_004624738:29,083,696...29,108,792
Ensembl chrNW_004624738:29,083,692...29,108,792 		JBrowse link
G Msl1 MSL complex subunit 1 enables IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004624795:3,070,233...3,083,746
Ensembl chrNW_004624795:3,068,887...3,083,751 		JBrowse link
G Mta2 metastasis associated 1 family member 2 enables IEA InterPro GO_REF:0000002 NCBI chrNW_004624926:1,124,887...1,133,025
Ensembl chrNW_004624926:1,124,446...1,133,696 		JBrowse link
G Mta3 metastasis associated 1 family member 3 enables IEA InterPro GO_REF:0000002 NCBI chrNW_004624738:24,247,752...24,403,234 JBrowse link
G Mtf2 metal response element binding transcription factor 2 enables IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004624742:4,567,292...4,627,909
Ensembl chrNW_004624742:4,569,064...4,627,862 		JBrowse link
G Myod1 myogenic differentiation 1 enables ISO (PMID:16245309), (PMID:18676376), (PMID:24301466) MGI PMID:16245309 PMID:18676376 PMID:24301466 NCBI chrNW_004624766:9,345,390...9,347,985
Ensembl chrNW_004624766:9,345,613...9,347,326 		JBrowse link
G Nanog Nanog homeobox enables ISO (PMID:18467660) MGI PMID:18467660 NCBI chrNW_004624860:5,026,203...5,037,219 JBrowse link
G Ncaph non-SMC condensin I complex subunit H enables IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004624749:2,411,952...2,439,981
Ensembl chrNW_004624749:2,411,970...2,444,446 		JBrowse link
G Ncaph2 non-SMC condensin II complex subunit H2 enables IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004624752:257,885...268,971
Ensembl chrNW_004624752:258,039...268,737 		JBrowse link
G Ncoa1 nuclear receptor coactivator 1 enables IEA Ensembl GO_REF:0000107 NCBI chrNW_004624738:6,770,745...7,054,616
Ensembl chrNW_004624738:6,943,726...7,054,454 		JBrowse link
G Ncoa2 nuclear receptor coactivator 2 enables ISO (PMID:16109736) MGI PMID:16109736 NCBI chrNW_004624744:20,795,385...21,078,706
Ensembl chrNW_004624744:20,938,555...21,078,690 		JBrowse link
G Ncoa3 nuclear receptor coactivator 3 enables ISO (PMID:16109736) MGI PMID:16109736 NCBI chrNW_004624790:7,229,152...7,358,627
Ensembl chrNW_004624790:7,232,519...7,358,684 		JBrowse link
G Ncoa5 nuclear receptor coactivator 5 enables IEA Ensembl GO_REF:0000107 NCBI chrNW_004624790:8,503,605...8,538,243
Ensembl chrNW_004624790:8,503,611...8,538,238 		JBrowse link
G Ncoa6 nuclear receptor coactivator 6 enables ISO (PMID:12446761) MGI PMID:12446761 NCBI chrNW_004624842:4,570,758...4,665,517 JBrowse link
G Ncor1 nuclear receptor corepressor 1 enables ISO (PMID:17392792) RGD
MGI		 PMID:17392792 PMID:20352046 RGD:5688346 NCBI chrNW_004624877:4,203,125...4,379,891
Ensembl chrNW_004624877:4,233,282...4,377,211 		JBrowse link
G Ncor2 nuclear receptor corepressor 2 enables ISO (PMID:15832170), (PMID:18347093), (PMID:19066220) RGD
MGI		 PMID:15832170 PMID:15870285 PMID:18347093 PMID:19066220 PMID:20137375 More... RGD:5688286 RGD:5688307 RGD:5688346 NCBI chrNW_004624747:23,777,645...23,887,804
Ensembl chrNW_004624747:23,777,325...23,865,804 		JBrowse link
G Nelfa negative elongation factor complex member A enables ISO (PMID:21670248) RGD
MGI		 PMID:21623364 PMID:21670248 RGD:9693718 NCBI chrNW_004624755:25,498,336...25,508,753
Ensembl chrNW_004624755:25,498,431...25,508,753 		JBrowse link
G Nelfe negative elongation factor complex member E enables ISO (PMID:31399344)
(PMID:14701750), (PMID:27256882)		 RGD
UniProt		 PMID:14701750 PMID:20097260 PMID:21623364 PMID:27256882 PMID:31399344 RGD:9588536 RGD:9693718 NCBI chrNW_004624754:24,300,012...24,310,777
Ensembl chrNW_004624754:24,300,602...24,310,671 		JBrowse link
G Neurod1 neuronal differentiation 1 enables IEA Ensembl GO_REF:0000107 NCBI chrNW_004624844:3,493,819...3,497,814
Ensembl chrNW_004624844:3,494,677...3,497,759 		JBrowse link
G Neurog1 neurogenin 1 enables IEA Ensembl GO_REF:0000107 NCBI chrNW_004624733:11,497,872...11,499,957
Ensembl chrNW_004624733:11,498,249...11,498,974 		JBrowse link
G Nfat5 nuclear factor of activated T cells 5 enables IEA Ensembl GO_REF:0000107 NCBI chrNW_004624746:16,684,556...16,818,321
Ensembl chrNW_004624746:16,684,407...16,818,430 		JBrowse link
G Nfatc1 nuclear factor of activated T cells 1 enables ISO (PMID:24301466) MGI PMID:24301466 NCBI chrNW_004624806:905,487...1,022,784
Ensembl chrNW_004624806:905,174...1,022,800 		JBrowse link
G Nfatc2 nuclear factor of activated T cells 2 enables IEA Ensembl GO_REF:0000107 NCBI chrNW_004624790:4,366,440...4,484,279
Ensembl chrNW_004624790:4,366,406...4,484,432 		JBrowse link
G Nfatc3 nuclear factor of activated T cells 3 enables ISO (PMID:16998587), (PMID:18676376), (PMID:21514407), (PMID:24301466) MGI PMID:16998587 PMID:18676376 PMID:21514407 PMID:24301466 NCBI chrNW_004624746:18,083,051...18,210,399
Ensembl chrNW_004624746:18,085,518...18,210,401 		JBrowse link
G Nfe2l1 NFE2 like bZIP transcription factor 1 enables ISO (PMID:25637874) MGI PMID:25637874 NCBI chrNW_004624795:4,652,221...4,663,341
Ensembl chrNW_004624795:4,652,637...4,662,454 		JBrowse link
G Nfia nuclear factor I A enables ISO (PMID:23407945) MGI PMID:23407945 NCBI chrNW_004624742:31,895,791...32,198,156
Ensembl chrNW_004624742:31,898,892...32,189,295 		JBrowse link
G Nfix nuclear factor I X enables ISO (PMID:29452604)
(PMID:23964093), (PMID:29452604)		 MGI PMID:23964093 PMID:29452604 NCBI chrNW_004624901:551,277...645,435
Ensembl chrNW_004624901:550,931...646,417 		JBrowse link
G Nfkb1 nuclear factor kappa B subunit 1 enables ISO (PMID:20442316), (PMID:22555453), (PMID:24434510) MGI PMID:20442316 PMID:22555453 PMID:24434510 NCBI chrNW_004624830:5,334,273...5,430,887
Ensembl chrNW_004624830:5,333,616...5,408,723 		JBrowse link
G Nipbl NIPBL cohesin loading factor enables IEA Ensembl
TreeGrafter		 GO_REF:0000107 GO_REF:0000118 NCBI chrNW_004624759:17,899,152...18,078,213
Ensembl chrNW_004624759:17,899,152...17,999,295 		JBrowse link
G Nkap NFKB activating protein enables IEA TreeGrafter
InterPro		 GO_REF:0000002 GO_REF:0000118 NCBI chrNW_004624895:3,840,846...3,849,390 JBrowse link
G Nkapl NFKB activating protein like enables IEA InterPro GO_REF:0000002 NCBI chrNW_004624756:24,637,721...24,639,251 JBrowse link
G Nkx2-5 NK2 homeobox 5 enables IEA Ensembl GO_REF:0000107 NCBI chrNW_004624733:16,881,189...16,884,245
Ensembl chrNW_004624733:16,881,191...16,884,210 		JBrowse link
G Nkx6-1 NK6 homeobox 1 ISO RGD PMID:15883383 RGD:2306242 NCBI chrNW_004624900:1,618,019...1,623,975
Ensembl chrNW_004624900:1,618,563...1,623,793 		JBrowse link
G Noc2l NOC2 like nucleolar associated transcriptional repressor enables ISO (PMID:16322561), (PMID:20123734) UniProt PMID:16322561 PMID:20123734 NCBI chrNW_004624818:8,551,379...8,563,760
Ensembl chrNW_004624818:8,551,462...8,563,529 		JBrowse link
G Noc3l NOC3 like DNA replication regulator enables IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004624737:5,692,010...5,740,747
Ensembl chrNW_004624737:5,709,710...5,740,598 		JBrowse link
G Nono non-POU domain containing octamer binding enables ISO (PMID:19389484) BHF-UCL PMID:19389484 NCBI chrNW_004624903:1,562,818...1,583,648
Ensembl chrNW_004624903:1,562,743...1,586,985 		JBrowse link
G Notch1 notch receptor 1 enables ISO (PMID:15689374) MGI PMID:15689374 NCBI chrNW_004624760:1,636,331...1,676,398
Ensembl chrNW_004624760:1,634,702...1,676,531 		JBrowse link
G Npm1 nucleophosmin 1 enables IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004624733:18,645,269...18,655,073 JBrowse link
G Npm2 nucleophosmin/nucleoplasmin 2 enables IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004624758:17,619,202...17,630,684
Ensembl chrNW_004624758:17,618,821...17,630,737 		JBrowse link
G Npm3 nucleophosmin/nucleoplasmin 3 enables IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004624831:1,261,652...1,263,417
Ensembl chrNW_004624831:1,261,652...1,263,387 		JBrowse link
G Nr3c1 nuclear receptor subfamily 3 group C member 1 ISO RGD PMID:15808513 RGD:1581612 NCBI chrNW_004624774:2,496,276...2,603,894
Ensembl chrNW_004624774:2,495,304...2,602,632 		JBrowse link
G Nr5a1 nuclear receptor subfamily 5 group A member 1 enables ISO (PMID:16109736), (PMID:19389484) BHF-UCL PMID:16109736 PMID:19389484 NCBI chrNW_004624760:10,603,504...10,626,259
Ensembl chrNW_004624760:10,605,877...10,626,386 		JBrowse link
G Nr5a2 nuclear receptor subfamily 5 group A member 2 enables ISO (PMID:19389484) BHF-UCL PMID:19389484 NCBI chrNW_004624798:356,953...494,877 JBrowse link
G Nsd1 nuclear receptor binding SET domain protein 1 enables ISO (PMID:15522233) MGI PMID:15522233 NCBI chrNW_004624733:12,781,693...12,929,861
Ensembl chrNW_004624733:12,786,347...12,927,980 		JBrowse link
G Nsd2 nuclear receptor binding SET domain protein 2 enables ISO (PMID:19483677) MGI PMID:19483677 NCBI chrNW_004624755:25,510,329...25,588,540
Ensembl chrNW_004624755:25,509,301...25,588,204 		JBrowse link
G Nucks1 nuclear casein kinase and cyclin dependent kinase substrate 1 enables ISO (PMID:26323318) ParkinsonsUK-UCL PMID:26323318 NCBI chrNW_004624807:5,495,770...5,535,907 JBrowse link
G Nudt21 nudix hydrolase 21 enables ISO (PMID:18032416) UniProt PMID:18032416 NCBI chrNW_004624757:115,249...130,775
Ensembl chrNW_004624757:114,844...130,097 		JBrowse link
G Nup153 nucleoporin 153 ISO RGD PMID:10362555 RGD:10401210 NCBI chrNW_004624756:8,890,010...8,959,704
Ensembl chrNW_004624756:8,889,992...8,959,115 		JBrowse link
G Nupr1 nuclear protein 1, transcriptional regulator enables ISO (PMID:19723804) MGI PMID:19723804 NCBI chrNW_004624782:13,042,938...13,044,298
Ensembl chrNW_004624782:13,042,939...13,044,267 		JBrowse link
G Obi1 ORC ubiquitin ligase 1 enables ISO (PMID:31160578) UniProt PMID:31160578 NCBI chrNW_004624751:21,752,339...21,803,387
Ensembl chrNW_004624751:21,752,270...21,803,930 		JBrowse link
G Onecut1 one cut homeobox 1 enables ISO (PMID:22780989) MGI PMID:22780989 NCBI chrNW_004624731:7,911,352...7,938,440
Ensembl chrNW_004624731:7,911,264...7,939,434 		JBrowse link
G Orc1 origin recognition complex subunit 1 enables ISO
IEA		 RGD
InterPro		 PMID:16982680 GO_REF:0000002 RGD:2313416 NCBI chrNW_004624859:833,360...863,631
Ensembl chrNW_004624859:833,793...863,539 		JBrowse link
G Ovol2 ovo like zinc finger 2 enables ISO (PMID:24735878) MGI PMID:24735878 NCBI chrNW_004624741:18,994,689...19,012,381
Ensembl chrNW_004624741:18,995,246...19,012,910 		JBrowse link
G Paf1 PAF1 homolog, Paf1/RNA polymerase II complex component enables IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004624794:12,719,819...12,725,109
Ensembl chrNW_004624794:12,719,861...12,725,122 		JBrowse link
G Pam peptidylglycine alpha-amidating monooxygenase enables ISO (PMID:10601332) MGI PMID:10601332 NCBI chrNW_004624743:20,834,664...21,178,933
Ensembl chrNW_004624743:20,988,916...21,178,933 		JBrowse link
G Parg poly(ADP-ribose) glycohydrolase ISO RGD PMID:12858335 RGD:724638 NCBI chrNW_004624928:54,610...188,948
Ensembl chrNW_004624928:54,874...186,353 		JBrowse link
G Parp1 poly(ADP-ribose) polymerase 1 enables ISO (PMID:30675909), (PMID:34874266), (PMID:35013556)
(PMID:24449909)		 UniProt
MGI		 PMID:24449909 PMID:30675909 PMID:34874266 PMID:35013556 NCBI chrNW_004624807:446,662...478,571
Ensembl chrNW_004624807:446,647...479,069 		JBrowse link
G Parp2 poly(ADP-ribose) polymerase 2 enables ISO (PMID:32939087) UniProt PMID:32939087 NCBI chrNW_004624825:4,312,243...4,326,058
Ensembl chrNW_004624825:4,313,217...4,325,968 		JBrowse link
G Patz1 POZ/BTB and AT hook containing zinc finger 1 enables ISO (PMID:16491076) MGI PMID:16491076 NCBI chrNW_004624747:7,823,009...7,841,997
Ensembl chrNW_004624747:7,822,591...7,842,403 		JBrowse link
G Pax3 paired box 3 enables ISO (PMID:15729346) MGI PMID:15729346 NCBI chrNW_004624823:2,870,762...2,963,134
Ensembl chrNW_004624823:2,871,162...2,961,944 		JBrowse link
G Pax6 paired box 6 enables IEA Ensembl GO_REF:0000107 NCBI chrNW_004624766:20,536,581...20,554,589
Ensembl chrNW_004624766:20,536,233...20,554,759 		JBrowse link
G Pbrm1 polybromo 1 enables IEA InterPro
TreeGrafter		 GO_REF:0000002 GO_REF:0000118 NCBI chrNW_004624822:4,529,350...4,666,714
Ensembl chrNW_004624822:4,529,007...4,663,165 		JBrowse link
G Pbx2 PBX homeobox 2 enables ISO (PMID:16672333) MGI PMID:16672333 NCBI chrNW_004624754:24,132,886...24,137,699 JBrowse link
G Pcgf2 polycomb group ring finger 2 enables ISO (PMID:15741318), (PMID:16687444) MGI PMID:15741318 PMID:16687444 NCBI chrNW_004624795:3,942,868...3,952,325
Ensembl chrNW_004624795:3,947,885...3,951,122 		JBrowse link
G Pclaf PCNA clamp associated factor enables IEA TreeGrafter
Ensembl		 GO_REF:0000107 GO_REF:0000118 NCBI chrNW_004624781:8,195,256...8,207,357
Ensembl chrNW_004624781:8,195,451...8,206,187 		JBrowse link
G Pcna proliferating cell nuclear antigen enables ISO (PMID:23277426), (PMID:24939902) UniProt PMID:23277426 PMID:24939902 NCBI chrNW_004624741:6,143,584...6,148,055
Ensembl chrNW_004624741:6,143,332...6,148,898 		JBrowse link
G Pdx1 pancreatic and duodenal homeobox 1 enables ISO (PMID:19651901) MGI PMID:19651901 NCBI chrNW_004624776:10,591,855...10,596,738
Ensembl chrNW_004624776:10,591,855...10,596,676 		JBrowse link
G Pelp1 proline, glutamate and leucine rich protein 1 enables ISO (PMID:17505058) UniProt PMID:17505058 NCBI chrNW_004624786:8,529,425...8,552,730
Ensembl chrNW_004624786:8,529,476...8,552,693 		JBrowse link
G Phc1 polyhomeotic homolog 1 enables IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004624860:4,720,722...4,747,456 JBrowse link
G Phc2 polyhomeotic homolog 2 enables IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004624764:16,353,193...16,456,115
Ensembl chrNW_004624764:16,351,954...16,456,119 		JBrowse link
G Phc3 polyhomeotic homolog 3 enables IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004624730:48,144,767...48,258,807
Ensembl chrNW_004624730:48,153,414...48,238,279 		JBrowse link
G Phf1 PHD finger protein 1 enables ISO
IEA		 RGD
TreeGrafter		 PMID:23879974 GO_REF:0000118 RGD:9586746 NCBI chrNW_004624754:23,400,338...23,405,370
Ensembl chrNW_004624754:23,400,664...23,404,212 		JBrowse link
G Phf13 PHD finger protein 13 enables IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004624818:4,913,209...4,921,093
Ensembl chrNW_004624818:4,913,287...4,921,118 		JBrowse link
G Phf19 PHD finger protein 19 enables IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004624760:14,468,418...14,486,942
Ensembl chrNW_004624760:14,468,461...14,487,091 		JBrowse link
G Phf21a PHD finger protein 21A enables ISO
IEA		 RGD
TreeGrafter		 PMID:19439607 GO_REF:0000118 RGD:9588528 NCBI chrNW_004624767:2,388,111...2,584,033
Ensembl chrNW_004624767:2,388,093...2,584,033 		JBrowse link
G Phf8 PHD finger protein 8 enables ISO (PMID:20622854) UniProt PMID:20622854 NCBI chrNW_004624909:1,481,710...1,639,840 JBrowse link
G Pitx2 paired like homeodomain 2 enables ISO (PMID:11157981), (PMID:17767158) MGI PMID:11157981 PMID:17767158 NCBI chrNW_004624838:4,872,279...4,889,780
Ensembl chrNW_004624838:4,871,511...4,886,384 		JBrowse link
G Pkn1 protein kinase N1 enables ISO (PMID:18066052) UniProt PMID:18066052 NCBI chrNW_004624901:1,582,790...1,605,279 JBrowse link
G Pknox1 PBX/knotted 1 homeobox 1 enables IEA Ensembl GO_REF:0000107 NCBI chrNW_004624745:27,696,257...27,754,162
Ensembl chrNW_004624745:27,696,185...27,754,138 		JBrowse link
G Plac8 placenta associated 8 enables ISO (PMID:21982742) MGI PMID:21982742 NCBI chrNW_004624900:134,075...157,982
Ensembl chrNW_004624900:133,889...158,050 		JBrowse link
G Pola1 DNA polymerase alpha 1, catalytic subunit enables IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004624897:969,431...1,272,762
Ensembl chrNW_004624897:969,479...1,272,803 		JBrowse link
G Pold1 DNA polymerase delta 1, catalytic subunit enables ISO (PMID:16762037), (PMID:24939902) UniProt PMID:16762037 PMID:24939902 NCBI chrNW_004624832:4,117,597...4,135,092
Ensembl chrNW_004624832:4,117,341...4,135,035 		JBrowse link
G Pole DNA polymerase epsilon, catalytic subunit enables ISO (PMID:16762037) UniProt PMID:16762037 NCBI chrNW_004624747:28,024,230...28,068,390
Ensembl chrNW_004624747:28,024,975...28,068,344 		JBrowse link
G Polg DNA polymerase gamma, catalytic subunit enables ISO (PMID:18063578) UniProt PMID:18063578 NCBI chrNW_004624768:16,493,123...16,509,747
Ensembl chrNW_004624768:16,491,555...16,509,900 		JBrowse link
G Polq DNA polymerase theta enables ISO (PMID:25642963) UniProt PMID:25642963 NCBI chrNW_004624731:26,649,606...26,808,098
Ensembl chrNW_004624731:26,649,727...26,807,222 		JBrowse link
G Polr1a RNA polymerase I subunit A enables ISO (PMID:26089203) UniProt PMID:26089203 NCBI chrNW_004624749:17,138,352...17,216,039
Ensembl chrNW_004624749:17,138,476...17,215,124 		JBrowse link
G Polr2b RNA polymerase II subunit B enables ISO (PMID:22287103) MGI PMID:22287103 NCBI chrNW_004624761:12,387,553...12,430,211
Ensembl chrNW_004624761:12,387,553...12,430,871 		JBrowse link
G Polr3a RNA polymerase III subunit A enables ISO (PMID:22287103) MGI PMID:22287103 NCBI chrNW_004624754:11,166,126...11,215,205
Ensembl chrNW_004624754:11,173,601...11,215,258 		JBrowse link
G Polr3d RNA polymerase III subunit D enables ISO (PMID:22287103), (PMID:24107381)
(PMID:24107381)		 MGI PMID:22287103 PMID:24107381 NCBI chrNW_004624758:17,817,716...17,823,442
Ensembl chrNW_004624758:17,817,690...17,824,427 		JBrowse link
G Polr3g RNA polymerase III subunit G enables ISO (PMID:24107381) MGI PMID:24107381 NCBI chrNW_004624743:9,733,372...9,765,967 JBrowse link
G Polr3gl RNA polymerase III subunit GL enables ISO (PMID:24107381) MGI PMID:24107381 NCBI chrNW_004624772:17,320,090...17,328,492
Ensembl chrNW_004624772:17,281,782...17,328,628 		JBrowse link
G Pou1f1 POU class 1 homeobox 1 enables ISO (PMID:16678101), (PMID:17015435), (PMID:17392792) MGI PMID:16678101 PMID:17015435 PMID:17392792 NCBI chrNW_004624789:3,589,863...3,605,655
Ensembl chrNW_004624789:3,592,214...3,605,537 		JBrowse link
G Pou2f1 POU class 2 homeobox 1 enables ISO (PMID:16735694) RGD
MGI		 PMID:16735694 PMID:17481938 RGD:9743917 NCBI chrNW_004624826:5,334,365...5,501,421
Ensembl chrNW_004624826:5,334,366...5,493,821 		JBrowse link
G Pou4f1 POU class 4 homeobox 1 enables ISO (PMID:12934100) ParkinsonsUK-UCL PMID:12934100 NCBI chrNW_004624751:21,812,567...21,817,837
Ensembl chrNW_004624751:21,812,850...21,814,747 		JBrowse link
G Pou4f2 POU class 4 homeobox 2 enables ISO (PMID:18434421), (PMID:20826655) MGI PMID:18434421 PMID:20826655 NCBI chrNW_004624853:5,446,575...5,448,704
Ensembl chrNW_004624853:5,446,694...5,448,637 		JBrowse link
G Pou5f1 POU class 5 homeobox 1 enables ISO (PMID:15988017), (PMID:18467660), (PMID:21295276) MGI PMID:15988017 PMID:18467660 PMID:21295276 NCBI chrNW_004624754:24,758,055...24,764,723 JBrowse link
G Pparg peroxisome proliferator activated receptor gamma enables ISO (PMID:19066220), (PMID:21035761), (PMID:23275342), (PMID:23499423), (PMID:23775123) MGI PMID:19066220 PMID:21035761 PMID:23275342 PMID:23499423 PMID:23775123 NCBI chrNW_004624956:84,673...207,176
Ensembl chrNW_004624956:83,842...149,481 		JBrowse link
G Ppargc1a PPARG coactivator 1 alpha ISO RGD PMID:22705949 RGD:7242168 NCBI chrNW_004624755:7,826,219...8,460,746
Ensembl chrNW_004624755:8,375,596...8,465,297 		JBrowse link
G Ppp2r3b protein phosphatase 2 regulatory subunit B''beta enables ISO (PMID:15522233) MGI PMID:15522233 NCBI chrNW_004624834:282,347...290,389 JBrowse link
G Prdm11 PR/SET domain 11 enables ISO (PMID:25499759) MGI PMID:25499759 NCBI chrNW_004624767:3,132,563...3,201,355 JBrowse link
G Prdm13 PR/SET domain 13 enables ISO (PMID:23639443) MGI PMID:23639443 NCBI chrNW_004624810:5,421,231...5,428,863
Ensembl chrNW_004624810:5,421,522...5,428,848 		JBrowse link
G Prdm8 PR/SET domain 8 enables ISO (PMID:22284184) MGI PMID:22284184 NCBI chrNW_004624757:10,801,701...10,809,887
Ensembl chrNW_004624757:10,802,406...10,805,704 		JBrowse link
G Primpol primase and DNA directed polymerase enables IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004624769:15,414,510...15,451,711
Ensembl chrNW_004624769:15,425,234...15,453,613 		JBrowse link
G Prkaa1 protein kinase AMP-activated catalytic subunit alpha 1 enables ISO (PMID:20647423) UniProt PMID:20647423 NCBI chrNW_004624759:14,143,439...14,174,971
Ensembl chrNW_004624759:14,142,956...14,171,718 		JBrowse link
G Prkaa2 protein kinase AMP-activated catalytic subunit alpha 2 enables ISO (PMID:20647423) UniProt PMID:20647423 NCBI chrNW_004624862:3,443,720...3,496,078
Ensembl chrNW_004624862:3,450,078...3,496,142 		JBrowse link
G Prkcb protein kinase C beta enables ISO (PMID:20228790) UniProt PMID:20228790 NCBI chrNW_004624782:8,974,995...9,287,609
Ensembl chrNW_004624782:8,974,765...9,287,702 		JBrowse link
G Prmt5 protein arginine methyltransferase 5 enables ISO (PMID:18347060) MGI PMID:18347060 NCBI chrNW_004624820:9,599,867...9,608,578
Ensembl chrNW_004624820:9,599,734...9,608,703 		JBrowse link
G Prmt6 protein arginine methyltransferase 6 enables IEA Ensembl GO_REF:0000107 NCBI chrNW_004624772:3,071,601...3,075,866
Ensembl chrNW_004624772:3,071,844...3,075,601 		JBrowse link
G Prop1 PROP paired-like homeobox 1 enables ISO (PMID:16678101) MGI PMID:16678101 NCBI chrNW_004624733:41,852,638...41,856,493
Ensembl chrNW_004624733:41,850,474...41,856,459 		JBrowse link
G Psip1 PC4 and SRSF1 interacting protein 1 enables ISO (PMID:20974633) UniProt PMID:20974633 NCBI chrNW_004624736:19,618,417...19,665,896 JBrowse link
G Ptf1a pancreas associated transcription factor 1a enables ISO (PMID:23639443), (PMID:25063451) MGI PMID:23639443 PMID:25063451 NCBI chrNW_004624796:5,548,982...5,550,563
Ensembl chrNW_004624796:5,549,184...5,550,439 		JBrowse link
G Pus1 pseudouridine synthase 1 enables ISO (PMID:15327771) MGI PMID:15327771 NCBI chrNW_004624747:27,699,397...27,707,592
Ensembl chrNW_004624747:27,698,816...27,709,514 		JBrowse link
G Pwwp2a PWWP domain containing 2A enables IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004624733:29,404,918...29,443,674
Ensembl chrNW_004624733:29,404,778...29,441,414 		JBrowse link
G Pygo2 pygopus family PHD finger 2 enables IEA Ensembl GO_REF:0000107 NCBI chrNW_004624885:2,521,230...2,525,449
Ensembl chrNW_004624885:2,521,368...2,525,449 		JBrowse link
G Rad17 RAD17 checkpoint clamp loader component enables IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004624905:244,811...277,362
Ensembl chrNW_004624905:249,511...276,922 		JBrowse link
G Rad21 RAD21 cohesin complex component enables IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004624763:15,131,106...15,157,512
Ensembl chrNW_004624763:15,131,005...15,158,155 		JBrowse link
G Rad21l1 RAD21 cohesin complex component like 1 enables IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004624741:2,486,612...2,542,452
Ensembl chrNW_004624741:2,485,471...2,542,500 		JBrowse link
G Rad51 RAD51 recombinase enables ISO (PMID:23401855)
(PMID:24108124)		 UniProt
MGI		 PMID:23401855 PMID:24108124 NCBI chrNW_004624804:7,957,175...7,983,078
Ensembl chrNW_004624804:7,957,253...7,983,619 		JBrowse link
G Rag2 recombination activating 2 enables IEA Ensembl GO_REF:0000107 NCBI chrNW_004624767:10,678,547...10,680,130
Ensembl chrNW_004624767:10,678,359...10,680,132 		JBrowse link
G Rara retinoic acid receptor alpha enables ISO (PMID:20080953) UniProt PMID:20080953 NCBI chrNW_004624795:2,935,432...2,975,226
Ensembl chrNW_004624795:2,934,731...2,967,232 		JBrowse link
G Rarg retinoic acid receptor gamma enables ISO (PMID:15327771) MGI PMID:15327771 NCBI chrNW_004624904:1,255,854...1,277,946 JBrowse link
G Rbmx RNA binding motif protein X-linked enables ISO (PMID:18541147) UniProt PMID:18541147 NCBI chrNW_004624808:10,176,695...10,185,847
Ensembl chrNW_004624808:10,176,293...10,182,079 		JBrowse link
G Rbpj recombination signal binding protein for immunoglobulin kappa J region enables ISO (PMID:17015435), (PMID:23571214), (PMID:23639443) MGI PMID:17015435 PMID:23571214 PMID:23639443 NCBI chrNW_004624755:6,176,497...6,298,034
Ensembl chrNW_004624755:6,176,497...6,298,225 		JBrowse link
G Rbpjl recombination signal binding protein for immunoglobulin kappa J region like enables IEA Ensembl GO_REF:0000107 NCBI chrNW_004624790:9,173,059...9,185,271
Ensembl chrNW_004624790:9,173,653...9,184,378 		JBrowse link
G Rcc1 regulator of chromosome condensation 1 enables ISO (PMID:2677018) UniProt PMID:2677018 NCBI chrNW_004624764:12,316,976...12,360,673
Ensembl chrNW_004624764:12,326,738...12,362,213 		JBrowse link
G Rcor1 REST corepressor 1 enables ISO (PMID:17392792) MGI PMID:17392792 NCBI chrNW_004624734:1,866,886...1,972,685
Ensembl chrNW_004624734:1,866,830...1,972,986 		JBrowse link
G Rec8 REC8 meiotic recombination protein enables IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004624820:8,361,345...8,369,356
Ensembl chrNW_004624820:8,361,400...8,368,347 		JBrowse link
G Rela RELA proto-oncogene, NF-kB subunit enables IEA Ensembl GO_REF:0000107 NCBI chrNW_004624767:20,732,813...20,742,016
Ensembl chrNW_004624767:20,732,938...20,741,272 		JBrowse link
G Rere arginine-glutamic acid dipeptide repeats enables IEA InterPro GO_REF:0000002 NCBI chrNW_004624818:3,255,835...3,648,634
Ensembl chrNW_004624818:3,388,149...3,648,634 		JBrowse link
G Rest RE1 silencing transcription factor enables ISO (PMID:16684532), (PMID:22780989) MGI PMID:16684532 PMID:22780989 NCBI chrNW_004624761:12,464,243...12,495,294 JBrowse link
G Ring1 ring finger protein 1 enables IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004624754:23,595,612...23,599,146
Ensembl chrNW_004624754:23,594,910...23,599,434 		JBrowse link
G Rit2 Ras like without CAAX 2 enables ISO (PMID:12934100) ParkinsonsUK-UCL PMID:12934100 NCBI chrNW_004624779:17,128,640...17,467,505
Ensembl chrNW_004624779:17,128,075...17,467,817 		JBrowse link
G Rnf168 ring finger protein 168 enables IEA UniProt GO_REF:0000104 NCBI chrNW_004624730:61,592,967...61,627,585
Ensembl chrNW_004624730:61,591,943...61,627,170 		JBrowse link
G Rnf2 ring finger protein 2 enables IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004624814:8,470,818...8,516,252 JBrowse link
G Rnf20 ring finger protein 20 enables ISO (PMID:22252316) MGI PMID:22252316 NCBI chrNW_004624758:9,759,535...9,783,235
Ensembl chrNW_004624758:9,758,101...9,783,411 		JBrowse link
G Rnf8 ring finger protein 8 enables IEA UniProt
Ensembl		 GO_REF:0000104 GO_REF:0000107 NCBI chrNW_004624754:20,683,133...20,714,469
Ensembl chrNW_004624754:20,679,867...20,714,522 		JBrowse link
G Rpa1 replication protein A1 enables ISO (PMID:12091911) MGI PMID:12091911 NCBI chrNW_004624786:4,547,889...4,604,605
Ensembl chrNW_004624786:4,547,962...4,604,290 		JBrowse link
G Runx2 RUNX family transcription factor 2 enables ISO (PMID:15537544), (PMID:18487609) MGI PMID:15537544 PMID:18487609 NCBI chrNW_004624754:14,601,574...14,868,469
Ensembl chrNW_004624754:14,679,974...14,867,729 		JBrowse link
G Safb scaffold attachment factor B enables ISO (PMID:19403048) UniProt PMID:19403048 NCBI chrNW_004624828:4,526,708...4,557,458
Ensembl chrNW_004624828:4,525,536...4,557,715 		JBrowse link
G Sall1 spalt like transcription factor 1 enables ISO (PMID:20439720) MGI PMID:20439720 NCBI chrNW_004624757:5,572,510...5,587,623
Ensembl chrNW_004624757:5,572,528...5,587,617 		JBrowse link
G Samd1 sterile alpha motif domain containing 1 enables ISO (PMID:33980486) UniProt PMID:33980486 NCBI chrNW_004624901:1,315,309...1,318,167
Ensembl chrNW_004624901:1,315,854...1,318,152 		JBrowse link
G Samd13 sterile alpha motif domain containing 13 enables IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004624742:13,121,273...13,163,101
Ensembl chrNW_004624742:13,121,244...13,162,723 		JBrowse link
G Samd7 sterile alpha motif domain containing 7 enables IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004624730:47,963,819...47,992,869
Ensembl chrNW_004624730:47,963,819...47,992,910 		JBrowse link
G Sarnp SAP domain containing ribonucleoprotein enables IEA Ensembl GO_REF:0000107 NCBI chrNW_004624802:12,200,201...12,260,246
Ensembl chrNW_004624802:12,200,312...12,254,195 		JBrowse link
G Satb1 SATB homeobox 1 enables ISO (PMID:21930775) MGI PMID:21930775 NCBI chrNW_004624821:3,723,609...3,820,921
Ensembl chrNW_004624821:3,726,355...3,800,497 		JBrowse link
G Satb2 SATB homeobox 2 enables ISO (PMID:16751105), (PMID:23144223) MGI PMID:16751105 PMID:23144223 NCBI chrNW_004624889:1,321,323...1,466,368
Ensembl chrNW_004624889:1,321,345...1,466,319 		JBrowse link
G Scmh1 Scm polycomb group protein homolog 1 enables IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004624892:435,145...621,203
Ensembl chrNW_004624892:435,459...550,941 		JBrowse link
G Scml1 Scm polycomb group protein like 1 enables IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004624829:2,521,983...2,534,309 JBrowse link
G Scml2 Scm polycomb group protein like 2 enables IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004624829:3,095,925...3,175,062 JBrowse link
G Scml4 Scm polycomb group protein like 4 enables IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004624780:14,516,123...14,575,762
Ensembl chrNW_004624780:14,502,821...14,578,402 		JBrowse link
G Setd7 SET domain containing 7, histone lysine methyltransferase enables IEA
ISO		 TreeGrafter
RGD		 PMID:20930066 GO_REF:0000118 RGD:9491847 NCBI chrNW_004624777:19,764,383...19,812,804
Ensembl chrNW_004624777:19,768,698...19,814,506 		JBrowse link
G Setdb1 SET domain bifurcated histone lysine methyltransferase 1 enables ISO (PMID:27029610)
(PMID:22079090)		 UniProt
MGI		 PMID:22079090 PMID:27029610 NCBI chrNW_004624772:18,855,405...18,894,285
Ensembl chrNW_004624772:18,855,332...18,894,226 		JBrowse link
G Setsip SET like protein enables ISO (PMID:22869753) UniProt PMID:22869753 NCBI chrNW_004624742:7,073,431...7,075,394 JBrowse link
G Sf3b1 splicing factor 3b subunit 1 enables ISO (PMID:15741318), (PMID:20153721) MGI PMID:15741318 PMID:20153721 NCBI chrNW_004624889:2,796,351...2,835,592 JBrowse link
G Sfmbt1 Scm like with four mbt domains 1 enables IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004624822:4,160,661...4,328,058 JBrowse link
G Sfmbt2 Scm like with four mbt domains 2 enables IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004624775:2,151,927...2,386,949 JBrowse link
G Sfpq splicing factor proline and glutamine rich enables ISO (PMID:19389484) BHF-UCL PMID:19389484 NCBI chrNW_004624764:18,223,845...18,239,748
Ensembl chrNW_004624764:18,228,365...18,240,340 		JBrowse link
G Shmt2 serine hydroxymethyltransferase 2 enables ISO (PMID:18063578) UniProt PMID:18063578 NCBI chrNW_004624802:10,713,276...10,718,391
Ensembl chrNW_004624802:10,713,276...10,719,253 		JBrowse link
G Sin3a SIN3 transcription regulator family member A enables ISO (PMID:17074803), (PMID:18212064) MGI PMID:17074803 PMID:18212064 NCBI chrNW_004624894:300,027...388,397
Ensembl chrNW_004624894:301,082...362,683 		JBrowse link
G Sin3b SIN3 transcription regulator family member B enables ISO (PMID:16103876) MGI PMID:16103876 NCBI chrNW_004624908:766,727...787,951
Ensembl chrNW_004624908:767,421...788,616 		JBrowse link
G Sirt2 sirtuin 2 enables ISO (PMID:23908241) UniProt PMID:23908241 NCBI chrNW_004624794:12,239,363...12,259,561
Ensembl chrNW_004624794:12,235,263...12,259,276 		JBrowse link
G Sirt6 sirtuin 6 enables ISO (PMID:27043296), (PMID:27912097)
(PMID:24105743)
(PMID:33067423)		 UniProt
MGI
DisProt		 PMID:24105743 PMID:27043296 PMID:27912097 PMID:33067423 NCBI chrNW_004624828:5,441,973...5,449,549
Ensembl chrNW_004624828:5,442,057...5,451,520 		JBrowse link
G Sirt7 sirtuin 7 enables ISO (PMID:22722849) UniProt PMID:22722849 NCBI chrNW_004624801:10,753,480...10,760,601
Ensembl chrNW_004624801:10,753,333...10,764,122 		JBrowse link
G Six1 SIX homeobox 1 enables IEA Ensembl GO_REF:0000107 NCBI chrNW_004624734:40,453,445...40,457,551
Ensembl chrNW_004624734:40,453,420...40,459,671 		JBrowse link
G Ski SKI proto-oncogene enables ISO (PMID:19008232) MGI PMID:19008232 NCBI chrNW_004624818:7,674,184...7,736,249
Ensembl chrNW_004624818:7,673,203...7,736,255 		JBrowse link
G Skil SKI like proto-oncogene enables ISO (PMID:15657445) MGI PMID:15657445 NCBI chrNW_004624730:48,376,625...48,404,059
Ensembl chrNW_004624730:48,377,499...48,404,141 		JBrowse link
G Skor2 SKI family transcriptional corepressor 2 enables ISO (PMID:24491816) MGI PMID:24491816 NCBI chrNW_004624778:10,757,829...10,807,277
Ensembl chrNW_004624778:10,758,013...10,809,789 		JBrowse link
G Slc30a9 solute carrier family 30 member 9 enables ISO (PMID:15988012) MGI PMID:15988012 NCBI chrNW_004624761:24,869,370...24,944,410
Ensembl chrNW_004624761:24,869,491...24,944,258 		JBrowse link
G Smad2 SMAD family member 2 enables IEA Ensembl GO_REF:0000107 NCBI chrNW_004624778:11,380,656...11,460,566
Ensembl chrNW_004624778:11,384,769...11,501,078 		JBrowse link
G Smad3 SMAD family member 3 enables ISO (PMID:16619037) MGI PMID:16619037 NCBI chrNW_004624781:5,795,652...5,890,047
Ensembl chrNW_004624781:5,795,652...5,890,371 		JBrowse link
G Smad4 SMAD family member 4 enables IEA Ensembl GO_REF:0000107 NCBI chrNW_004624778:14,570,025...14,629,950
Ensembl chrNW_004624778:14,570,348...14,630,325 		JBrowse link
G Smad6 SMAD family member 6 enables ISO (PMID:16491121) UniProt PMID:16491121 NCBI chrNW_004624781:6,043,183...6,108,959
Ensembl chrNW_004624781:6,042,904...6,107,860 		JBrowse link
G Smarca1 SNF2 related chromatin remodeling ATPase 1 enables IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004624797:8,627,048...8,710,540
Ensembl chrNW_004624797:8,626,742...8,710,845 		JBrowse link
G Smarca2 SWI/SNF related BAF chromatin remodeling complex subunit ATPase 2 enables ISO
IEA		 RGD
TreeGrafter		 PMID:15574597 PMID:16452305 GO_REF:0000118 RGD:9586065 RGD:9586344 NCBI chrNW_004624736:6,681,491...6,863,403
Ensembl chrNW_004624736:6,695,658...6,865,809 		JBrowse link
G Smarca4 SWI/SNF related BAF chromatin remodeling complex subunit ATPase 4 enables ISO (PMID:10318760), (PMID:16245309), (PMID:16287714), (PMID:17074803), (PMID:18267097), (PMID:25119045) RGD
MGI		 PMID:10318760 PMID:16245309 PMID:16287714 PMID:16452305 PMID:17074803 More... RGD:9586344 NCBI chrNW_004624828:2,893,075...2,985,968
Ensembl chrNW_004624828:2,893,096...2,985,968 		JBrowse link
G Smarca5 SNF2 related chromatin remodeling ATPase 5 enables IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004624848:3,569,744...3,611,104 JBrowse link
G Smarcc1 SWI/SNF related BAF chromatin remodeling complex subunit C1 enables IEA UniProt GO_REF:0000117 NCBI chrNW_004624730:73,696,734...73,856,082
Ensembl chrNW_004624730:73,696,749...73,856,082 		JBrowse link
G Smarcc2 SWI/SNF related BAF chromatin remodeling complex subunit C2 enables IEA UniProt
Ensembl		 GO_REF:0000107 GO_REF:0000117 NCBI chrNW_004624802:11,821,686...11,845,407
Ensembl chrNW_004624802:11,821,615...11,845,403 		JBrowse link
G Smarcd1 SWI/SNF related BAF chromatin remodeling complex subunit D1 ISO RGD PMID:24615205 RGD:9586357 NCBI chrNW_004624816:2,213,963...2,227,739
Ensembl chrNW_004624816:2,213,969...2,228,413 		JBrowse link
G Smarcd3 SWI/SNF related BAF chromatin remodeling complex subunit D3 ISO RGD PMID:23110084 RGD:9586362 NCBI chrNW_004624800:5,378,364...5,406,474
Ensembl chrNW_004624800:5,379,707...5,406,474 		JBrowse link
G Smc1a structural maintenance of chromosomes 1A enables ISO (PMID:20720539), (PMID:22415368)
(PMID:11076961)		 MGI
UniProt		 PMID:11076961 PMID:20720539 PMID:22415368 NCBI chrNW_004624909:617,015...668,513
Ensembl chrNW_004624909:630,062...668,512 		JBrowse link
G Smc2 structural maintenance of chromosomes 2 enables ISO (PMID:23531880) MGI PMID:23531880 NCBI chrNW_004624758:7,267,024...7,318,930
Ensembl chrNW_004624758:7,268,474...7,317,919 		JBrowse link
G Smc3 structural maintenance of chromosomes 3 enables IEA Ensembl GO_REF:0000107 NCBI chrNW_004624737:35,698,722...35,730,854
Ensembl chrNW_004624737:35,694,566...35,730,829 		JBrowse link
G Smc4 structural maintenance of chromosomes 4 enables ISO (PMID:23531880) MGI PMID:23531880 NCBI chrNW_004624730:38,145,101...38,178,788 JBrowse link
G Snai2 snail family transcriptional repressor 2 enables ISO (PMID:17905753) MGI PMID:17905753 NCBI chrNW_004624735:6,594,564...6,598,288
Ensembl chrNW_004624735:6,594,695...6,598,757 		JBrowse link
G Sox10 SRY-box transcription factor 10 enables ISO (PMID:15729346) RGD
MGI		 PMID:15729346 PMID:27466180 RGD:12879825 NCBI chrNW_004624752:9,965,015...9,976,244
Ensembl chrNW_004624752:9,965,756...9,973,777 		JBrowse link
G Sox14 SRY-box transcription factor 14 enables ISO (PMID:24105743) MGI PMID:24105743 NCBI chrNW_004624730:14,278,017...14,279,929
Ensembl chrNW_004624730:14,278,020...14,279,496 		JBrowse link
G Sox15 SRY-box transcription factor 15 enables ISO (PMID:15863505) MGI PMID:15863505 NCBI chrNW_004624786:10,202,988...10,204,808
Ensembl chrNW_004624786:10,202,988...10,204,358 		JBrowse link
G Sox2 SRY-box transcription factor 2 enables ISO (PMID:15988017) MGI PMID:15988017 NCBI chrNW_004624730:59,570,879...59,573,001
Ensembl chrNW_004624730:59,570,915...59,571,871 		JBrowse link
G Sox9 SRY-box transcription factor 9 enables ISO (PMID:20484372) UniProt PMID:20484372 NCBI chrNW_004624801:2,296,353...2,300,853
Ensembl chrNW_004624801:2,296,168...2,301,596 		JBrowse link
G Sp3 Sp3 transcription factor enables ISO (PMID:15522233) MGI PMID:15522233 NCBI chrNW_004624787:11,144,581...11,193,520 JBrowse link
G Spi1 Spi-1 proto-oncogene enables ISO (PMID:30171019), (PMID:30911105) ARUK-UCL PMID:30171019 PMID:30911105 NCBI chrNW_004624767:1,376,649...1,404,382
Ensembl chrNW_004624767:1,394,704...1,404,406 		JBrowse link
G Srebf1 sterol regulatory element binding transcription factor 1 enables ISO (PMID:15637161), (PMID:17074803), (PMID:19564420) RGD
MGI		 PMID:15637161 PMID:17074803 PMID:19371623 PMID:19564420 RGD:8693606 NCBI chrNW_004624849:3,602,103...3,623,922
Ensembl chrNW_004624849:3,602,261...3,623,465 		JBrowse link
G Srebf2 sterol regulatory element binding transcription factor 2 ISO RGD PMID:19470373 RGD:2308817 NCBI chrNW_004624752:6,815,075...6,871,674
Ensembl chrNW_004624752:6,816,468...6,871,567 		JBrowse link
G Srf serum response factor enables ISO (PMID:21379568) MGI PMID:21379568 NCBI chrNW_004624754:16,371,995...16,381,287 JBrowse link
G Ssbp1 single stranded DNA binding protein 1 enables ISO (PMID:18063578) UniProt PMID:18063578 NCBI chrNW_004624765:21,746,633...21,771,234
Ensembl chrNW_004624765:21,746,794...21,761,258 		JBrowse link
G Ssrp1 structure specific recognition protein 1 enables ISO (PMID:22252316) MGI PMID:22252316 NCBI chrNW_004624864:3,253,639...3,262,105 JBrowse link
G Stag1 STAG1 cohesin complex component enables IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004624730:12,762,099...13,158,603
Ensembl chrNW_004624730:12,761,460...13,086,965 		JBrowse link
G Stag2 STAG2 cohesin complex component enables IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004624797:2,659,785...2,794,168
Ensembl chrNW_004624797:2,719,508...2,794,379 		JBrowse link
G Stag3 STAG3 cohesin complex component enables IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004624740:16,706,695...16,734,142
Ensembl chrNW_004624740:16,707,999...16,732,537 		JBrowse link
G Stpg1 sperm tail PG-rich repeat containing 1 enables IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004624764:8,787,260...8,827,279
Ensembl chrNW_004624764:8,789,302...8,827,262 		JBrowse link
G Stpg4 sperm-tail PG-rich repeat containing 4 enables IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004624738:28,481,864...28,525,079
Ensembl chrNW_004624738:28,483,591...28,521,268 		JBrowse link
G Supt5h SPT5 homolog, DSIF elongation factor subunit enables ISO (PMID:21670248) MGI PMID:21670248 NCBI chrNW_004624794:12,766,734...12,791,590
Ensembl chrNW_004624794:12,766,806...12,804,611 		JBrowse link
G Suv39h2 SUV39H2 histone lysine methyltransferase enables ISO (PMID:11094092) UniProt PMID:11094092 NCBI chrNW_004624805:594,986...619,115
Ensembl chrNW_004624805:597,406...618,969 		JBrowse link
G Suz12 SUZ12 polycomb repressive complex 2 subunit enables ISO (PMID:16687444), (PMID:25547114) MGI PMID:16687444 PMID:25547114 NCBI chrNW_004624875:4,425,486...4,477,338
Ensembl chrNW_004624875:4,425,418...4,477,909 		JBrowse link
G Svep1 sushi, von Willebrand factor type A, EGF and pentraxin domain containing 1 enables ISO (PMID:15522233) MGI PMID:15522233 NCBI chrNW_004624758:946,334...1,188,976
Ensembl chrNW_004624758:946,999...1,188,933 		JBrowse link
G Tada2a transcriptional adaptor 2A enables IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004624871:4,412,703...4,478,275
Ensembl chrNW_004624871:4,415,409...4,469,359 		JBrowse link
G Tada2b transcriptional adaptor 2B enables IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004624755:23,262,693...23,272,531
Ensembl chrNW_004624755:23,262,687...23,272,522 		JBrowse link
G Taf2 TATA-box binding protein associated factor 2 enables IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004624763:17,801,835...17,907,538
Ensembl chrNW_004624763:17,806,280...17,907,547 		JBrowse link
G Tal1 TAL bHLH transcription factor 1, erythroid differentiation factor enables ISO (PMID:16763211)
(PMID:18184866), (PMID:18550854), (PMID:19011221)		 MGI PMID:16763211 PMID:18184866 PMID:18550854 PMID:19011221 NCBI chrNW_004624859:5,586,489...5,601,225
Ensembl chrNW_004624859:5,586,977...5,601,460 		JBrowse link
G Tasor transcription activation suppressor enables IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004624822:577,840...626,126
Ensembl chrNW_004624822:565,559...624,710 		JBrowse link
G Tbl1x transducin beta like 1 X-linked enables ISO (PMID:15728386) MGI PMID:15728386 NCBI chrNW_004624834:7,086,348...7,281,974 JBrowse link
G Tcf3 transcription factor 3 enables ISO (PMID:18550854), (PMID:19011221) MGI PMID:18550854 PMID:19011221 NCBI chrNW_004624828:7,090,562...7,119,970
Ensembl chrNW_004624828:7,090,605...7,121,428 		JBrowse link
G Tcf4 transcription factor 4 enables ISO (PMID:24192035) MGI PMID:24192035 NCBI chrNW_004624792:686,360...1,030,199
Ensembl chrNW_004624792:686,774...1,027,397 		JBrowse link
G Tcf7l1 transcription factor 7 like 1 enables ISO (PMID:18202148), (PMID:18467660) MGI PMID:18202148 PMID:18467660 NCBI chrNW_004624749:17,804,630...17,956,504
Ensembl chrNW_004624749:17,803,772...17,829,805 		JBrowse link
G Tcf7l2 transcription factor 7 like 2 enables ISO (PMID:17727834)
(PMID:23824574)		 MGI PMID:17727834 PMID:23824574 NCBI chrNW_004624737:33,341,574...33,526,814
Ensembl chrNW_004624737:33,341,029...33,526,928 		JBrowse link
G Tdrd3 tudor domain containing 3 enables ISO (PMID:21172665) UniProt PMID:21172665 NCBI chrNW_004624748:21,656,003...21,815,589 JBrowse link
G Tfam transcription factor A, mitochondrial enables ISO (PMID:18063578) UniProt PMID:18063578 NCBI chrNW_004624791:5,183,276...5,198,986
Ensembl chrNW_004624791:5,179,195...5,198,611 		JBrowse link
G Tfap2a transcription factor AP-2 alpha enables ISO (PMID:15475956), (PMID:18224708) UniProt PMID:15475956 PMID:18224708 NCBI chrNW_004624756:15,413,950...15,436,037
Ensembl chrNW_004624756:15,418,260...15,436,379 		JBrowse link
G Tfap2b transcription factor AP-2 beta ISO RGD PMID:20875861 RGD:5147969 NCBI chrNW_004624855:5,353,347...5,381,454
Ensembl chrNW_004624855:5,355,239...5,381,477 		JBrowse link
G Tgif1 TGFB induced factor homeobox 1 enables ISO (PMID:16428452) MGI PMID:16428452 NCBI chrNW_004624770:13,506,501...13,515,388
Ensembl chrNW_004624770:13,508,409...13,516,457 		JBrowse link
G Thrb thyroid hormone receptor beta enables IEA Ensembl GO_REF:0000107 NCBI chrNW_004624788:1,950,888...2,348,895
Ensembl chrNW_004624788:1,950,890...2,349,343 		JBrowse link
G Ticrr TOPBP1 interacting checkpoint and replication regulator enables IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004624768:16,669,847...16,716,335
Ensembl chrNW_004624768:16,670,390...16,715,697 		JBrowse link
G Tle1 TLE family member 1, transcriptional corepressor enables ISO (PMID:16002402) MGI PMID:16002402 NCBI chrNW_004624811:9,287,088...9,382,522
Ensembl chrNW_004624811:9,287,088...9,381,660 		JBrowse link
G Tnrc18 trinucleotide repeat containing 18 enables IEA InterPro GO_REF:0000002 NCBI chrNW_004624740:28,167,902...28,253,316
Ensembl chrNW_004624740:28,170,226...28,252,338 		JBrowse link
G Top1 DNA topoisomerase I enables ISO (PMID:9049244) UniProt PMID:9049244 NCBI chrNW_004624919:1,668,712...1,756,624
Ensembl chrNW_004624919:1,668,440...1,756,629 		JBrowse link
G Top2b DNA topoisomerase II beta enables ISO (PMID:9049244) UniProt PMID:9049244 NCBI chrNW_004624788:3,493,188...3,590,138 JBrowse link
G Tox3 TOX high mobility group box family member 3 enables ISO (PMID:21172805) UniProt PMID:21172805 NCBI chrNW_004624757:4,144,799...4,275,154
Ensembl chrNW_004624757:4,168,672...4,276,392 		JBrowse link
G Tp53 tumor protein p53 enables ISO (PMID:16322561), (PMID:17599062)
(PMID:15657445), (PMID:18212064), (PMID:20434500)		 MGI PMID:15657445 PMID:16322561 PMID:17599062 PMID:18212064 PMID:20434500 NCBI chrNW_004624786:10,266,316...10,282,664
Ensembl chrNW_004624786:10,263,518...10,271,218 		JBrowse link
G Tp63 tumor protein p63 enables IEA Ensembl GO_REF:0000107 NCBI chrNW_004624730:67,283,444...67,489,808
Ensembl chrNW_004624730:67,286,160...67,489,670 		JBrowse link
G Tpr translocated promoter region, nuclear basket protein enables ISO (PMID:17897941) UniProt PMID:17897941 NCBI chrNW_004624814:7,249,379...7,306,239
Ensembl chrNW_004624814:7,249,278...7,306,235 		JBrowse link
G Trim24 tripartite motif containing 24 enables ISO (PMID:21164480)
(PMID:10318760)		 UniProt
MGI		 PMID:10318760 PMID:21164480 NCBI chrNW_004624765:18,966,663...19,079,857 JBrowse link
G Trim28 tripartite motif containing 28 enables ISO (PMID:27029610) UniProt PMID:27029610 NCBI chrNW_004624832:49,324...56,113 JBrowse link
G Trim37 tripartite motif containing 37 enables ISO (PMID:24105743) MGI PMID:24105743 NCBI chrNW_004624871:899,931...1,049,583
Ensembl chrNW_004624871:912,140...1,021,354 		JBrowse link
G Trim66 tripartite motif containing 66 enables ISO (PMID:24105743) MGI PMID:24105743 NCBI chrNW_004624766:772,565...833,372
Ensembl chrNW_004624766:779,289...833,434 		JBrowse link
G Trrap transformation/transcription domain associated protein ISO RGD PMID:11511539 RGD:9588238 NCBI chrNW_004624740:32,349,521...32,472,240
Ensembl chrNW_004624740:32,349,568...32,472,308 		JBrowse link
G Tshz3 teashirt zinc finger homeobox 3 enables ISO (PMID:19343227) UniProt PMID:19343227 NCBI chrNW_004624794:6,279,964...6,351,026
Ensembl chrNW_004624794:6,280,513...6,350,727 		JBrowse link
G Ttc21b tetratricopeptide repeat domain 21B enables IEA Ensembl GO_REF:0000107 NCBI chrNW_004624787:3,685,700...3,745,018
Ensembl chrNW_004624787:3,686,088...3,744,895 		JBrowse link
G Ttc5 tetratricopeptide repeat domain 5 enables ISO (PMID:22362889) MGI PMID:22362889 NCBI chrNW_004624825:4,863,610...4,923,164
Ensembl chrNW_004624825:4,863,028...4,900,363 		JBrowse link
G Ttf1 transcription termination factor 1 enables IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004624760:3,893,665...3,918,237 JBrowse link
G Twist2 twist family bHLH transcription factor 2 enables ISO (PMID:16831897) MGI PMID:16831897 NCBI chrNW_004624847:3,730,126...3,774,338
Ensembl chrNW_004624847:3,730,291...3,773,773 		JBrowse link
G Ube2t ubiquitin conjugating enzyme E2 T enables ISO (PMID:17938197) UniProt PMID:17938197 NCBI chrNW_004624807:8,420,739...8,429,805
Ensembl chrNW_004624807:8,425,899...8,429,516 		JBrowse link
G Ubtf upstream binding transcription factor enables ISO (PMID:26089203) UniProt PMID:26089203 NCBI chrNW_004624795:768,627...779,174
Ensembl chrNW_004624795:768,697...780,639 		JBrowse link
G Upf1 UPF1 RNA helicase and ATPase enables ISO (PMID:16488880) HGNC-UCL PMID:16488880 NCBI chrNW_004624908:1,909,995...1,935,370
Ensembl chrNW_004624908:1,910,315...1,933,655 		JBrowse link
G Uri1 URI1 prefoldin like chaperone enables IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004624794:5,059,961...5,126,771
Ensembl chrNW_004624794:5,060,061...5,125,969 		JBrowse link
G Uxt ubiquitously expressed prefoldin like chaperone enables ISO (PMID:21730289) UniProt PMID:21730289 NCBI chrNW_004624978:209,222...216,909
Ensembl chrNW_004624978:208,432...217,497 		JBrowse link
G Wac WW domain containing adaptor with coiled-coil enables IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004624805:6,813,100...6,898,686 JBrowse link
G Wdhd1 WD repeat and HMG-box DNA binding protein 1 enables IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004624731:14,382,820...14,430,055
Ensembl chrNW_004624731:14,383,083...14,430,348 		JBrowse link
G Wdr82 WD repeat domain 82 enables IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004624730:6,032,426...6,067,303 JBrowse link
G Wrn WRN RecQ like helicase ISO RGD PMID:19737542 RGD:10042988 NCBI chrNW_004624780:12,875,747...13,051,492
Ensembl chrNW_004624780:12,876,093...13,025,739 		JBrowse link
G Yap1 Yes1 associated transcriptional regulator enables ISO (PMID:19952108), (PMID:21512031) MGI PMID:19952108 PMID:21512031 NCBI chrNW_004624878:621,214...776,363 JBrowse link
G Ybx1 Y-box binding protein 1 enables ISO (PMID:24788519) MGI PMID:24788519 NCBI chrNW_004624892:1,939,641...1,957,621
Ensembl chrNW_004624892:1,939,098...1,957,623 		JBrowse link
G Ybx2 Y-box binding protein 2 enables ISO (PMID:15665108) MGI PMID:15665108 NCBI chrNW_004624786:9,909,464...9,915,335
Ensembl chrNW_004624786:9,909,761...9,915,280 		JBrowse link
G Yy1 YY1 transcription factor enables ISO (PMID:24137001) MGI PMID:24137001 NCBI chrNW_004624734:3,846,753...3,875,294
Ensembl chrNW_004624734:3,846,765...3,875,294 		JBrowse link
G Zc3h12a zinc finger CCCH-type containing 12A enables IEA Ensembl GO_REF:0000107 NCBI chrNW_004624764:20,224,919...20,234,108
Ensembl chrNW_004624764:20,224,906...20,234,629 		JBrowse link
G Zc3h4 zinc finger CCCH-type containing 4 enables ISO (PMID:33767452) UniProt PMID:33767452 NCBI chrNW_004624832:6,571,825...6,609,637 JBrowse link
G Zeb1 zinc finger E-box binding homeobox 1 enables ISO (PMID:16824956), (PMID:17392792) RGD
MGI		 PMID:16824956 PMID:17392792 RGD:2325877 NCBI chrNW_004624805:3,964,448...4,044,546
Ensembl chrNW_004624805:3,964,450...4,042,527 		JBrowse link
G Zfp57 ZFP57 zinc finger protein enables ISO (PMID:30602440) UniProt PMID:30602440 NCBI chrNW_004624754:25,390,107...25,397,205 JBrowse link
G Znf143 zinc finger protein 143 ISO RGD PMID:21352097 RGD:9743924 NCBI chrNW_004624766:1,604,118...1,662,843
Ensembl chrNW_004624766:1,604,783...1,662,595 		JBrowse link
G Znf274 zinc finger protein 274 enables ISO (PMID:27029610) UniProt PMID:27029610 NCBI chrNW_004624832:319,533...337,272
Ensembl chrNW_004624832:319,948...336,974 		JBrowse link
G Znf445 zinc finger protein 445 enables ISO (PMID:30602440) UniProt PMID:30602440 NCBI chrNW_004624730:75,927,861...75,952,155
Ensembl chrNW_004624730:75,928,735...75,952,261 		JBrowse link
G Znhit1 zinc finger HIT-type containing 1 enables IEA Ensembl GO_REF:0000107 NCBI chrNW_004624740:16,066,354...16,073,810
Ensembl chrNW_004624740:16,066,354...16,073,643 		JBrowse link
chromatin DNA binding term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Actn4 actinin alpha 4 enables ISO (PMID:25411248) UniProt PMID:25411248 NCBI chrNW_004624794:12,042,627...12,113,762
Ensembl chrNW_004624794:12,042,533...12,113,886 		JBrowse link
G Apex1 apurinic/apyrimidinic endodeoxyribonuclease 1 enables ISO (PMID:11809897) UniProt PMID:11809897 NCBI chrNW_004624825:4,711,921...4,714,926
Ensembl chrNW_004624825:4,708,093...4,714,921 		JBrowse link
G Atoh1 atonal bHLH transcription factor 1 enables ISO (PMID:15788459) MGI PMID:15788459 NCBI chrNW_004624757:21,517,650...21,519,543
Ensembl chrNW_004624757:21,517,809...21,518,864 		JBrowse link
G Bap1 BRCA1 associated deubiquitinase 1 enables ISO (PMID:22878500) MGI PMID:22878500 NCBI chrNW_004624822:4,809,489...4,818,514
Ensembl chrNW_004624822:4,809,405...4,818,515 		JBrowse link
G Bcl6 BCL6 transcription repressor enables ISO (PMID:17125145) MGI PMID:17125145 NCBI chrNW_004624730:69,145,035...69,167,583
Ensembl chrNW_004624730:69,154,080...69,167,689 		JBrowse link
G Cebpa CCAAT enhancer binding protein alpha enables ISO (PMID:25921091) MGI PMID:25921091 NCBI chrNW_004624794:9,809,007...9,813,418 JBrowse link
G Cebpb CCAAT enhancer binding protein beta enables ISO (PMID:25921091) MGI PMID:25921091 NCBI chrNW_004624790:5,367,808...5,369,686
Ensembl chrNW_004624790:5,368,349...5,369,377 		JBrowse link
G Clock clock circadian regulator enables ISO (PMID:24610784) UniProt PMID:24610784 NCBI chrNW_004624761:13,915,277...14,038,596
Ensembl chrNW_004624761:13,916,653...14,036,164 		JBrowse link
G Crebbp CREB binding protein enables IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004624824:1,516,481...1,655,364
Ensembl chrNW_004624824:1,517,966...1,655,329 		JBrowse link
G Ddx17 DEAD-box helicase 17 enables ISO (PMID:29431742) MGI PMID:29431742 NCBI chrNW_004624752:9,602,267...9,620,770
Ensembl chrNW_004624752:9,602,447...9,620,575 		JBrowse link
G Dhx9 DExH-box helicase 9 enables ISO (PMID:24049074) UniProt PMID:24049074 NCBI chrNW_004624814:10,863,079...10,923,842
Ensembl chrNW_004624814:10,863,337...10,921,075 		JBrowse link
G Eomes eomesodermin enables ISO (PMID:30186101) MGI PMID:30186101 NCBI chrNW_004624788:5,550,569...5,557,342
Ensembl chrNW_004624788:5,550,445...5,557,321 		JBrowse link
G Ezh2 enhancer of zeste 2 polycomb repressive complex 2 subunit enables ISO (PMID:19734898)
(PMID:18483221), (PMID:24137001)		 UniProt
MGI		 PMID:18483221 PMID:19734898 PMID:24137001 NCBI chrNW_004624800:6,781,848...6,874,221
Ensembl chrNW_004624800:6,802,901...6,874,196 		JBrowse link
G Foxc2 forkhead box C2 enables ISO (PMID:16456100) UniProt PMID:16456100 NCBI chrNW_004624746:2,632,547...2,634,867
Ensembl chrNW_004624746:2,632,619...2,634,085 		JBrowse link
G Foxo1 forkhead box O1 enables ISO (PMID:29320745) MGI PMID:29320745 NCBI chrNW_004624748:1,413,754...1,529,646
Ensembl chrNW_004624748:1,413,983...1,529,992 		JBrowse link
G Foxo3 forkhead box O3 enables ISO (PMID:17521387) UniProt PMID:17521387 NCBI chrNW_004624780:13,621,733...13,740,399
Ensembl chrNW_004624780:13,622,948...13,740,374 		JBrowse link
G Gata1 GATA binding protein 1 enables ISO (PMID:22235304) UniProt PMID:22235304 NCBI chrNW_004624893:595,948...602,980
Ensembl chrNW_004624893:595,967...602,979 		JBrowse link
G Gli2 GLI family zinc finger 2 enables ISO (PMID:23201751) MGI PMID:23201751 NCBI chrNW_004624732:24,159,407...24,381,495
Ensembl chrNW_004624732:24,159,312...24,328,452 		JBrowse link
G Grhl1 grainyhead like transcription factor 1 enables ISO (PMID:21081122) UniProt PMID:21081122 NCBI chrNW_004624865:5,046,030...5,078,545
Ensembl chrNW_004624865:5,046,147...5,078,492 		JBrowse link
G Grhl2 grainyhead like transcription factor 2 enables ISO (PMID:21081122) UniProt PMID:21081122 NCBI chrNW_004624763:18,784,815...18,916,358
Ensembl chrNW_004624763:18,784,187...18,916,358 		JBrowse link
G Grhl3 grainyhead like transcription factor 3 enables ISO (PMID:21081122) UniProt PMID:21081122 NCBI chrNW_004624764:8,753,343...8,783,891
Ensembl chrNW_004624764:8,753,567...8,783,162 		JBrowse link
G H1-1 H1.1 linker histone, cluster member enables ISO (PMID:15911621) UniProt PMID:15911621 NCBI chrNW_004624756:885,994...901,354
Ensembl chrNW_004624756:885,994...886,641 		JBrowse link
G H1-4 H1.4 linker histone, cluster member enables ISO (PMID:15911621) UniProt PMID:15911621 NCBI chrNW_004624756:771,688...772,950
Ensembl chrNW_004624756:772,241...772,903 		JBrowse link
G Hcfc1 host cell factor C1 enables ISO (PMID:22878500) MGI PMID:22878500 NCBI chrNW_004624946:571,776...591,543
Ensembl chrNW_004624946:571,774...590,247 		JBrowse link
G Hdac2 histone deacetylase 2 enables ISO (PMID:18458156) MGI PMID:18458156 NCBI chrNW_004624856:4,834,197...4,861,546
Ensembl chrNW_004624856:4,834,217...4,861,592 		JBrowse link
G Hdac3 histone deacetylase 3 enables ISO (PMID:18458156), (PMID:32467224) MGI PMID:18458156 PMID:32467224 NCBI chrNW_004624774:845,970...864,080
Ensembl chrNW_004624774:845,358...863,809 		JBrowse link
G Hnrnpu heterogeneous nuclear ribonucleoprotein U enables ISO (PMID:11003645) UniProt PMID:11003645 NCBI chrNW_004624771:14,756,088...14,766,106
Ensembl chrNW_004624771:14,756,100...14,765,832 		JBrowse link
G Hr HR lysine demethylase and nuclear receptor corepressor enables IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004624758:17,699,357...17,719,188
Ensembl chrNW_004624758:17,699,400...17,715,482 		JBrowse link
G Hsf1 heat shock transcription factor 1 enables ISO (PMID:21085490) UniProt PMID:21085490 NCBI chrNW_004624735:12,536,818...12,562,643
Ensembl chrNW_004624735:12,537,128...12,562,644 		JBrowse link
G Insm1 INSM transcriptional repressor 1 enables ISO (PMID:16569215), (PMID:18417529) UniProt PMID:16569215 PMID:18417529 NCBI chrNW_004624741:20,862,835...20,866,176
Ensembl chrNW_004624741:20,863,088...20,864,584 		JBrowse link
G Jmjd1c jumonji domain containing 1C enables IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004624791:306,827...589,134
Ensembl chrNW_004624791:365,726...588,870 		JBrowse link
G Kdm3a lysine demethylase 3A enables IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004624749:16,784,538...16,829,784
Ensembl chrNW_004624749:16,784,538...16,829,365 		JBrowse link
G Kdm3b lysine demethylase 3B enables IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004624743:31,148,051...31,224,896
Ensembl chrNW_004624743:31,148,098...31,225,992 		JBrowse link
G Kdm4d lysine demethylase 4D enables ISO (PMID:6953429) MGI PMID:6953429 NCBI chrNW_004624735:39,640,090...39,695,833 JBrowse link
G Kdm5a lysine demethylase 5A enables ISO (PMID:18483221) MGI PMID:18483221 NCBI chrNW_004624735:8,473,778...8,631,964
Ensembl chrNW_004624735:8,530,016...8,631,954
Ensembl chrNW_004624735:8,530,016...8,631,954 		JBrowse link
G Kdm6a lysine demethylase 6A enables IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004624887:1,065,173...1,279,660
Ensembl chrNW_004624887:1,065,883...1,279,186 		JBrowse link
G Kdm6b lysine demethylase 6B enables IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004624786:10,413,670...10,435,118
Ensembl chrNW_004624786:10,425,816...10,433,806 		JBrowse link
G Klf4 KLF transcription factor 4 enables ISO (PMID:32467224) MGI PMID:32467224 NCBI chrNW_004624758:4,047,217...4,052,257
Ensembl chrNW_004624758:4,047,219...4,051,983 		JBrowse link
G Lemd2 LEM domain nuclear envelope protein 2 enables IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004624754:23,159,234...23,173,452
Ensembl chrNW_004624754:23,158,985...23,173,885 		JBrowse link
G LOC101701243 histone H2A.Z enables ISO (PMID:19834540), (PMID:23637611) UniProt PMID:19834540 PMID:23637611 NCBI chrNW_004624830:7,238,897...7,240,566
Ensembl chrNW_004624830:7,238,929...7,240,563 		JBrowse link
G LOC101706296 core histone macro-H2A.1 enables IEA UniProt
Ensembl		 GO_REF:0000104 GO_REF:0000107 NCBI chrNW_004624733:11,650,067...11,714,399
Ensembl chrNW_004624733:11,650,537...11,715,999 		JBrowse link
G LOC101710779 histone acetyltransferase p300-like enables IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004624752:7,313,525...7,323,769 JBrowse link
G LOC101711143 histone acetyltransferase p300-like enables IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004624752:7,335,342...7,340,846 JBrowse link
G LOC101711512 histone acetyltransferase p300 enables IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004624752:7,402,305...7,481,612
Ensembl chrNW_004624752:7,401,848...7,481,696 		JBrowse link
G LOC101712013 core histone macro-H2A.2 enables IEA Ensembl
UniProt		 GO_REF:0000104 GO_REF:0000107 NCBI chrNW_004624754:4,227,897...4,276,595
Ensembl chrNW_004624754:4,227,644...4,279,077 		JBrowse link
G LOC101717518 histone H1.0 enables ISO (PMID:15911621) UniProt PMID:15911621 NCBI chrNW_004624752:10,103,866...10,105,983 JBrowse link
G LOC106007541 inner nuclear membrane protein Man1 enables IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004624802:3,085,919...3,156,775
Ensembl chrNW_004624802:3,077,631...3,156,437 		JBrowse link
G LOC110345136 inner nuclear membrane protein Man1-like enables IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004624802:3,077,279...3,078,302 JBrowse link
G LOC110349366 histone acetyltransferase p300-like enables IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004624752:7,360,302...7,361,958 JBrowse link
G Mecp2 methyl-CpG binding protein 2 ISO RGD PMID:9038338 RGD:1601325 NCBI chrNW_004624946:620,581...685,339
Ensembl chrNW_004624946:628,284...685,246 		JBrowse link
G Med1 mediator complex subunit 1 ISO RGD PMID:20702579 RGD:5128544 NCBI chrNW_004624795:3,572,025...3,605,675
Ensembl chrNW_004624795:3,572,266...3,607,126 		JBrowse link
G Myod1 myogenic differentiation 1 enables ISO (PMID:25085416) MGI PMID:25085416 NCBI chrNW_004624766:9,345,390...9,347,985
Ensembl chrNW_004624766:9,345,613...9,347,326 		JBrowse link
G Myog myogenin enables ISO (PMID:22847234), (PMID:25085416) MGI PMID:22847234 PMID:25085416 NCBI chrNW_004624807:7,742,926...7,753,149
Ensembl chrNW_004624807:7,749,852...7,753,336 		JBrowse link
G Neurog3 neurogenin 3 enables ISO (PMID:16511571) UniProt PMID:16511571 NCBI chrNW_004624754:3,817,400...3,818,047 JBrowse link
G Nkap NFKB activating protein enables ISO (PMID:20610818) MGI PMID:20610818 NCBI chrNW_004624895:3,840,846...3,849,390 JBrowse link
G Notch1 notch receptor 1 enables ISO (PMID:17658278) MGI PMID:17658278 NCBI chrNW_004624760:1,636,331...1,676,398
Ensembl chrNW_004624760:1,634,702...1,676,531 		JBrowse link
G Nr1h2 nuclear receptor subfamily 1 group H member 2 enables ISO (PMID:29431742) MGI PMID:29431742 NCBI chrNW_004624832:4,136,052...4,141,648
Ensembl chrNW_004624832:4,132,904...4,140,896 		JBrowse link
G Nr1h3 nuclear receptor subfamily 1 group H member 3 enables ISO (PMID:29431742) MGI PMID:29431742 NCBI chrNW_004624767:1,459,601...1,473,224
Ensembl chrNW_004624767:1,459,601...1,467,795 		JBrowse link
G Ogt O-linked N-acetylglucosamine (GlcNAc) transferase enables ISO (PMID:22878500) MGI PMID:22878500 NCBI chrNW_004624903:1,863,110...1,912,299
Ensembl chrNW_004624903:1,863,337...1,910,177 		JBrowse link
G Pax6 paired box 6 enables IEA Ensembl GO_REF:0000107 NCBI chrNW_004624766:20,536,581...20,554,589
Ensembl chrNW_004624766:20,536,233...20,554,759 		JBrowse link
G Per1 period circadian regulator 1 enables ISO (PMID:24610784) UniProt PMID:24610784 NCBI chrNW_004624786:10,706,495...10,722,110
Ensembl chrNW_004624786:10,707,075...10,719,859 		JBrowse link
G Pitx2 paired like homeodomain 2 enables ISO (PMID:21035439) MGI PMID:21035439 NCBI chrNW_004624838:4,872,279...4,889,780
Ensembl chrNW_004624838:4,871,511...4,886,384 		JBrowse link
G Pole3 DNA polymerase epsilon 3, accessory subunit enables IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004624760:21,692,734...21,695,636
Ensembl chrNW_004624760:21,692,715...21,695,826 		JBrowse link
G Pou5f1 POU class 5 homeobox 1 enables ISO (PMID:24268575) MGI PMID:24268575 NCBI chrNW_004624754:24,758,055...24,764,723 JBrowse link
G Ppargc1a PPARG coactivator 1 alpha enables ISS UniProt GO_REF:0000024 NCBI chrNW_004624755:7,826,219...8,460,746
Ensembl chrNW_004624755:8,375,596...8,465,297 		JBrowse link
G Prdm14 PR/SET domain 14 enables IEA Ensembl GO_REF:0000107 NCBI chrNW_004624744:21,092,091...21,121,313
Ensembl chrNW_004624744:21,104,798...21,120,591 		JBrowse link
G Rara retinoic acid receptor alpha enables ISO (PMID:19917671) UniProt PMID:19917671 NCBI chrNW_004624795:2,935,432...2,975,226
Ensembl chrNW_004624795:2,934,731...2,967,232 		JBrowse link
G Rela RELA proto-oncogene, NF-kB subunit enables IEA Ensembl GO_REF:0000107 NCBI chrNW_004624767:20,732,813...20,742,016
Ensembl chrNW_004624767:20,732,938...20,741,272 		JBrowse link
G Runx2 RUNX family transcription factor 2 enables ISO (PMID:21930712) MGI PMID:21930712 NCBI chrNW_004624754:14,601,574...14,868,469
Ensembl chrNW_004624754:14,679,974...14,867,729 		JBrowse link
G Ruvbl2 RuvB like AAA ATPase 2 enables ISO (PMID:23637611) UniProt PMID:23637611 NCBI chrNW_004624832:5,014,484...5,028,868
Ensembl chrNW_004624832:5,014,484...5,028,885 		JBrowse link
G Rxra retinoid X receptor alpha enables ISO (PMID:17952069), (PMID:29431742) MGI PMID:17952069 PMID:29431742 NCBI chrNW_004624760:2,379,809...2,455,749
Ensembl chrNW_004624760:2,380,708...2,456,928 		JBrowse link
G Rxrb retinoid X receptor beta enables ISO (PMID:29431742) MGI PMID:29431742 NCBI chrNW_004624754:23,607,046...23,613,399
Ensembl chrNW_004624754:23,606,955...23,613,508 		JBrowse link
G Sbno1 strawberry notch homolog 1 enables IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004624747:23,214,619...23,275,928 JBrowse link
G Sbno2 strawberry notch homolog 2 enables IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004624828:7,479,695...7,532,961
Ensembl chrNW_004624828:7,478,970...7,537,428 		JBrowse link
G Sirt6 sirtuin 6 enables ISO (PMID:33067423) UniProt PMID:33067423 NCBI chrNW_004624828:5,441,973...5,449,549
Ensembl chrNW_004624828:5,442,057...5,451,520 		JBrowse link
G Smad3 SMAD family member 3 enables ISO (PMID:16224064) BHF-UCL PMID:16224064 NCBI chrNW_004624781:5,795,652...5,890,047
Ensembl chrNW_004624781:5,795,652...5,890,371 		JBrowse link
G Sox2 SRY-box transcription factor 2 enables ISO (PMID:24268575) MGI PMID:24268575 NCBI chrNW_004624730:59,570,879...59,573,001
Ensembl chrNW_004624730:59,570,915...59,571,871 		JBrowse link
G Srf serum response factor enables ISO (PMID:18458156) MGI PMID:18458156 NCBI chrNW_004624754:16,371,995...16,381,287 JBrowse link
G Stat3 signal transducer and activator of transcription 3 enables ISO (PMID:17344214) UniProt PMID:17344214 NCBI chrNW_004624795:1,648,235...1,680,788
Ensembl chrNW_004624795:1,648,080...1,681,200 		JBrowse link
G Suz12 SUZ12 polycomb repressive complex 2 subunit enables IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004624875:4,425,486...4,477,338
Ensembl chrNW_004624875:4,425,418...4,477,909 		JBrowse link
G Tbr1 T-box brain transcription factor 1 enables ISO (PMID:30186101) MGI PMID:30186101 NCBI chrNW_004624732:4,043,867...4,052,621
Ensembl chrNW_004624732:4,043,867...4,052,551 		JBrowse link
G Thra thyroid hormone receptor alpha enables ISO (PMID:17952069) MGI PMID:17952069 NCBI chrNW_004624795:3,109,663...3,132,494
Ensembl chrNW_004624795:3,108,854...3,132,464 		JBrowse link
G Thrb thyroid hormone receptor beta enables IEA Ensembl GO_REF:0000107 NCBI chrNW_004624788:1,950,888...2,348,895
Ensembl chrNW_004624788:1,950,890...2,349,343 		JBrowse link
G Top1 DNA topoisomerase I ISO RGD PMID:1332866 RGD:1580856 NCBI chrNW_004624919:1,668,712...1,756,624
Ensembl chrNW_004624919:1,668,440...1,756,629 		JBrowse link
G Tox thymocyte selection associated high mobility group box enables IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004624744:32,865,781...33,218,453
Ensembl chrNW_004624744:32,865,720...33,218,643 		JBrowse link
G Tox2 TOX high mobility group box family member 2 enables IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004624790:10,339,928...10,467,855
Ensembl chrNW_004624790:10,339,858...10,467,837 		JBrowse link
G Tox3 TOX high mobility group box family member 3 enables IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004624757:4,144,799...4,275,154
Ensembl chrNW_004624757:4,168,672...4,276,392 		JBrowse link
G Tox4 TOX high mobility group box family member 4 enables IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004624825:7,493,911...7,511,852
Ensembl chrNW_004624825:7,493,953...7,511,846 		JBrowse link
G Vax1 ventral anterior homeobox 1 enables ISO (PMID:15905411) MGI PMID:15905411 NCBI chrNW_004624737:29,489,601...29,496,548
Ensembl chrNW_004624737:29,490,936...29,496,483 		JBrowse link
G Vax2 ventral anterior homeobox 2 enables ISO (PMID:15905411) MGI PMID:15905411 NCBI chrNW_004624762:2,480,474...2,508,367
Ensembl chrNW_004624762:2,481,372...2,508,306 		JBrowse link
G Wbp2 WW domain binding protein 2 enables IEA Ensembl
TreeGrafter		 GO_REF:0000107 GO_REF:0000118 NCBI chrNW_004624801:5,737,034...5,745,935
Ensembl chrNW_004624801:5,736,797...5,746,018 		JBrowse link
G Wbp2nl WBP2 N-terminal like enables IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004624752:6,689,501...6,736,053
Ensembl chrNW_004624752:6,711,843...6,736,018 		JBrowse link
G Xbp1 X-box binding protein 1 enables ISO (PMID:25280941) UniProt PMID:25280941 NCBI chrNW_004624747:5,123,085...5,128,465 JBrowse link
G Zic2 Zic family member 2 enables ISO (PMID:20676059) UniProt PMID:20676059 NCBI chrNW_004624793:11,162,835...11,167,497
Ensembl chrNW_004624793:11,163,916...11,167,457 		JBrowse link
chromatin insulator sequence binding term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ctcf CCCTC-binding factor enables ISO (PMID:17827499) UniProt PMID:17827499 NCBI chrNW_004624746:18,705,017...18,760,345
Ensembl chrNW_004624746:18,706,663...18,760,203 		JBrowse link
chromatin loop anchoring activity term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ctcf CCCTC-binding factor enables ISO (PMID:34856126) FlyBase PMID:34856126 NCBI chrNW_004624746:18,705,017...18,760,345
Ensembl chrNW_004624746:18,706,663...18,760,203 		JBrowse link
nucleosomal DNA binding term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G H1-1 H1.1 linker histone, cluster member enables IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004624756:885,994...901,354
Ensembl chrNW_004624756:885,994...886,641 		JBrowse link
G Hmga2 high mobility group AT-hook 2 enables ISO (PMID:17078040) UniProt PMID:17078040 NCBI chrNW_004624802:2,337,344...2,468,757
Ensembl chrNW_004624802:2,337,464...2,467,990 		JBrowse link
G Hmgn1 high mobility group nucleosome binding domain 1 enables IEA InterPro GO_REF:0000002 NCBI chrNW_004624745:24,659,391...24,665,874
Ensembl chrNW_004624745:24,659,334...24,665,221 		JBrowse link
G Hmgn2 high mobility group nucleosomal binding domain 2 enables IEA InterPro GO_REF:0000002 NCBI chrNW_004624764:10,477,276...10,480,980 JBrowse link
G Hmgn3 high mobility group nucleosomal binding domain 3 enables IEA InterPro GO_REF:0000002 NCBI chrNW_004624819:5,831,031...5,860,249
Ensembl chrNW_004624819:5,830,311...5,860,141 		JBrowse link
G LOC101698172 histone H3.3 enables IEA Ensembl GO_REF:0000107 NCBI chrNW_004624801:5,668,661...5,672,164 JBrowse link
G LOC101699418 histone H3.3 enables ISO (PMID:19633671) UniProt PMID:19633671 NCBI chrNW_004624807:194,372...203,205 JBrowse link
G LOC101700059 histone H1oo enables ISO (PMID:22868987) UniProt PMID:22868987 NCBI chrNW_004624872:533,877...539,770 JBrowse link
G LOC101701243 histone H2A.Z enables ISO (PMID:19633671) UniProt PMID:19633671 NCBI chrNW_004624830:7,238,897...7,240,566
Ensembl chrNW_004624830:7,238,929...7,240,563 		JBrowse link
G LOC101704911 recombination repair protein 1-like enables IEA InterPro GO_REF:0000002 NCBI chrNW_004624859:252,734...260,277 JBrowse link
G LOC101706296 core histone macro-H2A.1 enables IEA Ensembl GO_REF:0000107 NCBI chrNW_004624733:11,650,067...11,714,399
Ensembl chrNW_004624733:11,650,537...11,715,999 		JBrowse link
G LOC101712045 SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily E member 1-like enables IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004624880:2,510,753...2,512,039 JBrowse link
G LOC101712333 high mobility group nucleosome-binding domain-containing protein 3 enables IEA InterPro GO_REF:0000002 NCBI chrNW_004624814:9,437,476...9,437,829 JBrowse link
G LOC101712482 non-histone chromosomal protein HMG-14 enables IEA InterPro GO_REF:0000002 NCBI chrNW_004624836:2,459,602...2,459,930 JBrowse link
G LOC101717518 histone H1.0 enables IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004624752:10,103,866...10,105,983 JBrowse link
G LOC101719834 non-histone chromosomal protein HMG-17 enables IEA InterPro GO_REF:0000002 NCBI chrNW_004624759:2,335,123...2,335,529 JBrowse link
G LOC101726086 histone H1.0 enables IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004624737:3,363,234...3,366,140 JBrowse link
G LOC101726503 high mobility group nucleosome-binding domain-containing protein 4 enables IEA InterPro GO_REF:0000002 NCBI chrNW_004624756:332,782...340,670 JBrowse link
G LOC106007871 non-histone chromosomal protein HMG-14-like enables IEA InterPro GO_REF:0000002 NCBI chrNW_004624832:4,392,102...4,393,632 JBrowse link
G Rcc1 regulator of chromosome condensation 1 enables ISO (PMID:17435751) UniProt PMID:17435751 NCBI chrNW_004624764:12,316,976...12,360,673
Ensembl chrNW_004624764:12,326,738...12,362,213 		JBrowse link
G Smarce1 SWI/SNF related BAF chromatin remodeling complex subunit E1 enables IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004624795:2,712,524...2,730,028
Ensembl chrNW_004624795:2,714,525...2,729,961 		JBrowse link
G Vrk1 VRK serine/threonine kinase 1 enables ISO (PMID:35390161) UniProt PMID:35390161 NCBI chrNW_004624734:6,595,827...6,678,139
Ensembl chrNW_004624734:6,595,814...6,678,081 		JBrowse link
nucleosome binding term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Arid1a AT-rich interaction domain 1A contributes_to
enables		 ISO
IEA		 (PMID:23129809) MGI
TreeGrafter		 PMID:23129809 GO_REF:0000118 NCBI chrNW_004624764:10,672,673...10,759,634
Ensembl chrNW_004624764:10,672,735...10,759,634 		JBrowse link
G Arid1b AT-rich interaction domain 1B enables IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004624785:970,169...1,417,847
Ensembl chrNW_004624785:973,003...1,417,853 		JBrowse link
G Cabin1 calcineurin binding protein 1 enables IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004624747:10,110,476...10,257,165
Ensembl chrNW_004624747:10,110,370...10,257,276 		JBrowse link
G Cgas cyclic GMP-AMP synthase enables ISO (PMID:32911480), (PMID:32911481), (PMID:32913000)
(PMID:32911482), (PMID:32912999), (PMID:33051594)		 UniProt PMID:32911480 PMID:32911481 PMID:32911482 PMID:32912999 PMID:32913000 More... NCBI chrNW_004624819:587,739...680,618
Ensembl chrNW_004624819:643,045...680,684 		JBrowse link
G Chd1l chromodomain helicase DNA binding protein 1 like enables ISO (PMID:33357431), (PMID:34210977), (PMID:34486521) UniProt PMID:33357431 PMID:34210977 PMID:34486521 NCBI chrNW_004624772:16,178,080...16,241,869
Ensembl chrNW_004624772:16,178,139...16,241,624 		JBrowse link
G Dnttip1 deoxynucleotidyltransferase terminal interacting protein 1 enables IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004624790:8,761,077...8,789,728
Ensembl chrNW_004624790:8,761,075...8,789,711 		JBrowse link
G Ezh1 enhancer of zeste 1 polycomb repressive complex 2 subunit enables ISO (PMID:33514705) DisProt PMID:33514705 NCBI chrNW_004624795:1,454,361...1,470,079 JBrowse link
G Ezh2 enhancer of zeste 2 polycomb repressive complex 2 subunit enables ISO (PMID:33479123) DisProt PMID:33479123 NCBI chrNW_004624800:6,781,848...6,874,221
Ensembl chrNW_004624800:6,802,901...6,874,196 		JBrowse link
G Glyr1 glyoxylate reductase 1 homolog enables IEA TreeGrafter
Ensembl		 GO_REF:0000107 GO_REF:0000118 NCBI chrNW_004624824:2,655,909...2,692,546
Ensembl chrNW_004624824:2,655,909...2,692,522 		JBrowse link
G Hp1bp3 heterochromatin protein 1 binding protein 3 enables IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004624764:5,760,002...5,794,705 JBrowse link
G L3mbtl1 L3MBTL histone methyl-lysine binding protein 1 enables ISO (PMID:17540172) UniProt PMID:17540172 NCBI chrNW_004624790:10,762,340...10,799,228
Ensembl chrNW_004624790:10,761,632...10,791,891 		JBrowse link
G LOC101713307 protein HIRA enables IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004624747:9...95,643 JBrowse link
G LOC101717518 histone H1.0 enables ISO (PMID:35377618) DisProt PMID:35377618 NCBI chrNW_004624752:10,103,866...10,105,983 JBrowse link
G Mllt10 MLLT10 histone lysine methyltransferase DOT1L cofactor enables IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004624796:6,762,304...6,949,126
Ensembl chrNW_004624796:6,762,118...6,948,816 		JBrowse link
G Mllt6 MLLT6, PHD finger containing enables IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004624795:3,955,769...3,976,588
Ensembl chrNW_004624795:3,959,213...3,976,616 		JBrowse link
G Nap1l4 nucleosome assembly protein 1 like 4 enables ISO (PMID:9325046) UniProt PMID:9325046 NCBI chrNW_004624767:15,690,848...15,735,618
Ensembl chrNW_004624767:15,690,848...15,735,969 		JBrowse link
G Noc2l NOC2 like nucleolar associated transcriptional repressor enables ISO (PMID:16322561) UniProt PMID:16322561 NCBI chrNW_004624818:8,551,379...8,563,760
Ensembl chrNW_004624818:8,551,462...8,563,529 		JBrowse link
G Parp1 poly(ADP-ribose) polymerase 1 enables ISO (PMID:15607977), (PMID:31848352) UniProt PMID:15607977 PMID:31848352 NCBI chrNW_004624807:446,662...478,571
Ensembl chrNW_004624807:446,647...479,069 		JBrowse link
G Parp2 poly(ADP-ribose) polymerase 2 enables ISO (PMID:32939087) UniProt PMID:32939087 NCBI chrNW_004624825:4,312,243...4,326,058
Ensembl chrNW_004624825:4,313,217...4,325,968 		JBrowse link
G Pwwp3a PWWP domain containing 3A, DNA repair factor enables IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004624828:7,309,629...7,334,165
Ensembl chrNW_004624828:7,309,119...7,334,176 		JBrowse link
G Rcc1 regulator of chromosome condensation 1 enables ISO (PMID:20347844) CAFA PMID:20347844 NCBI chrNW_004624764:12,316,976...12,360,673
Ensembl chrNW_004624764:12,326,738...12,362,213 		JBrowse link
G Rnf168 ring finger protein 168 enables IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004624730:61,592,967...61,627,585
Ensembl chrNW_004624730:61,591,943...61,627,170 		JBrowse link
G Rnf169 ring finger protein 169 enables IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004624817:2,272,874...2,371,168
Ensembl chrNW_004624817:2,277,222...2,371,105 		JBrowse link
G Rnf4 ring finger protein 4 enables ISO PMID:11319220 UniProt PMID:11319220 RGD:8554033 NCBI chrNW_004624755:25,139,637...25,163,586
Ensembl chrNW_004624755:25,141,567...25,153,942 		JBrowse link
G Sap30l SAP30 like enables IEA Ensembl GO_REF:0000107 NCBI chrNW_004624733:34,744,638...34,757,727
Ensembl chrNW_004624733:34,744,554...34,757,764 		JBrowse link
G Sirt6 sirtuin 6 enables ISO (PMID:23892288), (PMID:33067423)
(PMID:33067423)		 UniProt
DisProt		 PMID:23892288 PMID:33067423 NCBI chrNW_004624828:5,441,973...5,449,549
Ensembl chrNW_004624828:5,442,057...5,451,520 		JBrowse link
G Smarca1 SNF2 related chromatin remodeling ATPase 1 enables IEA InterPro GO_REF:0000002 NCBI chrNW_004624797:8,627,048...8,710,540
Ensembl chrNW_004624797:8,626,742...8,710,845 		JBrowse link
G Smarca5 SNF2 related chromatin remodeling ATPase 5 enables IEA InterPro GO_REF:0000002 NCBI chrNW_004624848:3,569,744...3,611,104 JBrowse link
G Ssrp1 structure specific recognition protein 1 enables IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004624864:3,253,639...3,262,105 JBrowse link
G Supt16h SPT16 homolog, facilitates chromatin remodeling subunit enables IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004624825:7,366,448...7,410,847
Ensembl chrNW_004624825:7,367,325...7,410,823 		JBrowse link
G Supt6h SPT6 homolog, histone chaperone and transcription elongation factor enables IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004624786:1,226,131...1,271,872
Ensembl chrNW_004624786:1,238,082...1,271,875 		JBrowse link
promoter-enhancer loop anchoring activity term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ahdc1 AT-hook DNA binding motif containing 1 enables IEA Ensembl GO_REF:0000107 NCBI chrNW_004624764:11,416,674...11,482,622
Ensembl chrNW_004624764:11,416,674...11,482,601 		JBrowse link
G Msl2 MSL complex subunit 2 enables IEA Ensembl GO_REF:0000107 NCBI chrNW_004624730:12,569,562...12,618,933 JBrowse link
G Pcbp2 poly(rC) binding protein 2 enables ISO (PMID:31361039) FlyBase PMID:31361039 NCBI chrNW_004624904:1,553,253...1,579,212
Ensembl chrNW_004624904:1,555,635...1,578,982 		JBrowse link
G Ruvbl2 RuvB like AAA ATPase 2 enables ISO (PMID:23637611) GO_Central PMID:23637611 NCBI chrNW_004624832:5,014,484...5,028,868
Ensembl chrNW_004624832:5,014,484...5,028,885 		JBrowse link
promoter-specific chromatin binding term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ahr aryl hydrocarbon receptor ISO RGD PMID:31746392 RGD:401793746 NCBI chrNW_004624739:12,939,183...12,987,574
Ensembl chrNW_004624739:12,942,165...12,987,973 		JBrowse link
G Atf2 activating transcription factor 2 enables ISO (PMID:18802055)
(PMID:17267404)		 MGI PMID:17267404 PMID:18802055 NCBI chrNW_004624787:12,241,838...12,338,089 JBrowse link
G Atf4 activating transcription factor 4 enables IEA Ensembl GO_REF:0000107 NCBI chrNW_004624752:8,822,955...8,825,019
Ensembl chrNW_004624752:8,822,740...8,825,032 		JBrowse link
G Bmi1 BMI1 proto-oncogene, polycomb ring finger enables IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004624796:6,277,201...6,282,830
Ensembl chrNW_004624796:6,274,561...6,282,984 		JBrowse link
G Chd7 chromodomain helicase DNA binding protein 7 enables ISO (PMID:26102480) MGI PMID:26102480 NCBI chrNW_004624744:31,103,053...31,302,314
Ensembl chrNW_004624744:31,103,059...31,235,623 		JBrowse link
G Ddx5 DEAD-box helicase 5 enables ISO (PMID:24910439) UniProt PMID:24910439 NCBI chrNW_004624870:206,714...214,264
Ensembl chrNW_004624870:204,671...214,156 		JBrowse link
G Dhx9 DExH-box helicase 9 enables ISO (PMID:28221134) UniProt PMID:28221134 NCBI chrNW_004624814:10,863,079...10,923,842
Ensembl chrNW_004624814:10,863,337...10,921,075 		JBrowse link
G Dnmt1 DNA methyltransferase 1 enables ISO (PMID:24623306) UniProt PMID:24623306 NCBI chrNW_004624828:2,316,042...2,358,866
Ensembl chrNW_004624828:2,315,251...2,358,711 		JBrowse link
G E2f4 E2F transcription factor 4 enables ISO (PMID:25100735) MGI PMID:25100735 NCBI chrNW_004624746:19,117,582...19,124,261
Ensembl chrNW_004624746:19,118,393...19,124,196 		JBrowse link
G Egr1 early growth response 1 enables ISO (PMID:20363028) RGD
UniProt		 PMID:20363028 PMID:22292946 RGD:10395298 NCBI chrNW_004624743:31,247,855...31,251,675
Ensembl chrNW_004624743:31,247,516...31,252,205 		JBrowse link
G Ehmt2 euchromatic histone lysine methyltransferase 2 enables ISO (PMID:22770845)
(PMID:23918802)		 MGI PMID:22770845 PMID:23918802 NCBI chrNW_004624754:24,354,271...24,368,319
Ensembl chrNW_004624754:24,354,284...24,368,638 		JBrowse link
G Ercc1 ERCC excision repair 1, endonuclease non-catalytic subunit enables ISO (PMID:22323595) MGI PMID:22323595 NCBI chrNW_004624907:2,288,380...2,298,909
Ensembl chrNW_004624907:2,288,423...2,298,373 		JBrowse link
G Ercc3 ERCC excision repair 3, TFIIH core complex helicase subunit enables IEA Ensembl GO_REF:0000107 NCBI chrNW_004624732:13,730,648...13,776,886
Ensembl chrNW_004624732:13,729,947...13,776,870 		JBrowse link
G Ercc4 ERCC excision repair 4, endonuclease catalytic subunit enables ISO (PMID:22323595) MGI PMID:22323595 NCBI chrNW_004624782:4,508,758...4,537,751
Ensembl chrNW_004624782:4,512,650...4,537,701 		JBrowse link
G Esr1 estrogen receptor 1 ISO RGD PMID:24046281 RGD:7364871 NCBI chrNW_004624785:6,164,507...6,601,302
Ensembl chrNW_004624785:6,164,379...6,601,326 		JBrowse link
G Esr2 estrogen receptor 2 ISO RGD PMID:24046281 RGD:7364871 NCBI chrNW_004624734:36,742,913...36,862,993
Ensembl chrNW_004624734:36,759,104...36,825,295 		JBrowse link
G Ezh2 enhancer of zeste 2 polycomb repressive complex 2 subunit enables ISO (PMID:24623306) UniProt PMID:24623306 NCBI chrNW_004624800:6,781,848...6,874,221
Ensembl chrNW_004624800:6,802,901...6,874,196 		JBrowse link
G Fos Fos proto-oncogene, AP-1 transcription factor subunit ISO mRNA:decreased expression:hippocampus RGD PMID:29330744 RGD:405650592 NCBI chrNW_004624734:26,424,053...26,427,431
Ensembl chrNW_004624734:26,423,079...26,427,732 		JBrowse link
G Fosl1 FOS like 1, AP-1 transcription factor subunit enables IEA Ensembl GO_REF:0000107 NCBI chrNW_004624767:20,519,054...20,525,311
Ensembl chrNW_004624767:20,519,313...20,524,554 		JBrowse link
G Foxc1 forkhead box C1 enables ISO (PMID:25808752) UniProt PMID:25808752 NCBI chrNW_004624756:23,060,065...23,062,407
Ensembl chrNW_004624756:23,060,751...23,062,343 		JBrowse link
G Foxc2 forkhead box C2 enables ISO (PMID:18187037) UniProt PMID:18187037 NCBI chrNW_004624746:2,632,547...2,634,867
Ensembl chrNW_004624746:2,632,619...2,634,085 		JBrowse link
G Foxo1 forkhead box O1 enables ISO (PMID:22514318) MGI PMID:22514318 NCBI chrNW_004624748:1,413,754...1,529,646
Ensembl chrNW_004624748:1,413,983...1,529,992 		JBrowse link
G Foxo4 forkhead box O4 ISO RGD PMID:16054032 RGD:10402362 NCBI chrNW_004624903:1,390,899...1,399,745
Ensembl chrNW_004624903:1,391,910...1,399,949 		JBrowse link
G Gadd45a growth arrest and DNA damage inducible alpha enables ISO (PMID:22323595) MGI PMID:22323595 NCBI chrNW_004624742:27,727,801...27,730,252
Ensembl chrNW_004624742:27,727,660...27,730,316 		JBrowse link
G Gli2 GLI family zinc finger 2 enables ISO (PMID:26565916)
(PMID:25808752)		 UniProt PMID:25808752 PMID:26565916 NCBI chrNW_004624732:24,159,407...24,381,495
Ensembl chrNW_004624732:24,159,312...24,328,452 		JBrowse link
G Gtf2b general transcription factor IIB enables ISO (PMID:12931194), (PMID:24441171)
(PMID:22323595)		 UniProt
MGI		 PMID:12931194 PMID:22323595 PMID:24441171 NCBI chrNW_004624742:8,687,002...8,721,505
Ensembl chrNW_004624742:8,686,537...8,723,399 		JBrowse link
G Gtf2f1 general transcription factor IIF subunit 1 enables ISO (PMID:24441171) UniProt PMID:24441171 NCBI chrNW_004624828:3,512,990...3,521,848
Ensembl chrNW_004624828:3,513,027...3,521,650 		JBrowse link
G Hdac1 histone deacetylase 1 enables ISO (PMID:22770845) MGI PMID:22770845 NCBI chrNW_004624764:15,510,655...15,552,020
Ensembl chrNW_004624764:15,510,866...15,552,025 		JBrowse link
G Hdac2 histone deacetylase 2 ISO RGD PMID:21586557 RGD:7241147 NCBI chrNW_004624856:4,834,197...4,861,546
Ensembl chrNW_004624856:4,834,217...4,861,592 		JBrowse link
G Hdac4 histone deacetylase 4 ISO RGD PMID:21586557 RGD:7241147 NCBI chrNW_004624847:3,846,196...4,101,537
Ensembl chrNW_004624847:3,845,858...4,101,487 		JBrowse link
G Hnf1b HNF1 homeobox B enables ISO (PMID:26292219) MGI PMID:26292219 NCBI chrNW_004624871:4,662,104...4,713,125
Ensembl chrNW_004624871:4,661,669...4,712,960 		JBrowse link
G Hnrnpu heterogeneous nuclear ribonucleoprotein U enables ISO
IEA		 RGD
TreeGrafter		 PMID:19632204 GO_REF:0000118 RGD:10059314 NCBI chrNW_004624771:14,756,088...14,766,106
Ensembl chrNW_004624771:14,756,100...14,765,832 		JBrowse link
G Hsf1 heat shock transcription factor 1 ISO RGD PMID:26053851 RGD:10402396 NCBI chrNW_004624735:12,536,818...12,562,643
Ensembl chrNW_004624735:12,537,128...12,562,644 		JBrowse link
G Ikzf3 IKAROS family zinc finger 3 enables ISO (PMID:17646674) UniProt PMID:17646674 NCBI chrNW_004624795:3,222,170...3,347,079
Ensembl chrNW_004624795:3,290,078...3,345,533 		JBrowse link
G Irf3 interferon regulatory factor 3 enables ISO (PMID:18802055) MGI PMID:18802055 NCBI chrNW_004624832:4,611,445...4,616,319
Ensembl chrNW_004624832:4,612,374...4,616,276 		JBrowse link
G Isl1 ISL LIM homeobox 1 enables IEA Ensembl GO_REF:0000107 NCBI chrNW_004624759:7,996,177...8,006,281
Ensembl chrNW_004624759:7,994,242...8,006,311 		JBrowse link
G Kat8 lysine acetyltransferase 8 enables ISO (PMID:23523075) UniProt PMID:23523075 NCBI chrNW_004624782:14,157,905...14,169,231
Ensembl chrNW_004624782:14,157,823...14,169,231 		JBrowse link
G Kdm1a lysine demethylase 1A enables ISO (PMID:19497860) BHF-UCL PMID:19497860 NCBI chrNW_004624764:7,664,550...7,742,494 JBrowse link
G Klf4 KLF transcription factor 4 enables ISO (PMID:27907090) UniProt PMID:27907090 NCBI chrNW_004624758:4,047,217...4,052,257
Ensembl chrNW_004624758:4,047,219...4,051,983 		JBrowse link
G L3mbtl2 L3MBTL histone methyl-lysine binding protein 2 enables ISO (PMID:22770845) MGI PMID:22770845 NCBI chrNW_004624752:7,291,888...7,309,379
Ensembl chrNW_004624752:7,292,852...7,309,856 		JBrowse link
G LOC101706296 core histone macro-H2A.1 enables IEA Ensembl GO_REF:0000107 NCBI chrNW_004624733:11,650,067...11,714,399
Ensembl chrNW_004624733:11,650,537...11,715,999 		JBrowse link
G Mecp2 methyl-CpG binding protein 2 enables ISO (PMID:16782889) RGD
MGI		 PMID:16782889 PMID:21425435 RGD:8552971 NCBI chrNW_004624946:620,581...685,339
Ensembl chrNW_004624946:628,284...685,246 		JBrowse link
G Med1 mediator complex subunit 1 enables ISO (PMID:22323595), (PMID:29519872) MGI PMID:22323595 PMID:29519872 NCBI chrNW_004624795:3,572,025...3,605,675
Ensembl chrNW_004624795:3,572,266...3,607,126 		JBrowse link
G Mybl1 MYB proto-oncogene like 1 enables ISO (PMID:26624618) MGI PMID:26624618 NCBI chrNW_004624744:24,736,813...24,775,427
Ensembl chrNW_004624744:24,736,861...24,770,884 		JBrowse link
G Myod1 myogenic differentiation 1 enables ISO (PMID:25217815) UniProt PMID:25217815 NCBI chrNW_004624766:9,345,390...9,347,985
Ensembl chrNW_004624766:9,345,613...9,347,326 		JBrowse link
G Ndn necdin, MAGE family member enables IEA Ensembl GO_REF:0000107 NCBI chrNW_004624768:579,607...581,302 JBrowse link
G Nfe2l1 NFE2 like bZIP transcription factor 1 enables ISO (PMID:25637874) MGI PMID:25637874 NCBI chrNW_004624795:4,652,221...4,663,341
Ensembl chrNW_004624795:4,652,637...4,662,454 		JBrowse link
G Nipbl NIPBL cohesin loading factor enables IEA Ensembl GO_REF:0000107 NCBI chrNW_004624759:17,899,152...18,078,213
Ensembl chrNW_004624759:17,899,152...17,999,295 		JBrowse link
G Nr3c1 nuclear receptor subfamily 3 group C member 1 enables IEA Ensembl GO_REF:0000107 NCBI chrNW_004624774:2,496,276...2,603,894
Ensembl chrNW_004624774:2,495,304...2,602,632 		JBrowse link
G Nrl neural retina leucine zipper enables IEA Ensembl GO_REF:0000107 NCBI chrNW_004624820:8,436,469...8,449,354
Ensembl chrNW_004624820:8,444,687...8,449,354 		JBrowse link
G Nup98 nucleoporin 98 and 96 precursor enables ISO (PMID:28221134) UniProt PMID:28221134 NCBI chrNW_004624817:5,125,658...5,245,453
Ensembl chrNW_004624817:5,123,977...5,245,286 		JBrowse link
G Pcgf1 polycomb group ring finger 1 enables IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004624749:28,999,506...29,007,744
Ensembl chrNW_004624749:29,004,390...29,010,393 		JBrowse link
G Pcgf2 polycomb group ring finger 2 enables IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004624795:3,942,868...3,952,325
Ensembl chrNW_004624795:3,947,885...3,951,122 		JBrowse link
G Pdx1 pancreatic and duodenal homeobox 1 ISO RGD PMID:19380737 RGD:2311163 NCBI chrNW_004624776:10,591,855...10,596,738
Ensembl chrNW_004624776:10,591,855...10,596,676 		JBrowse link
G Polr2a RNA polymerase II subunit A enables ISO (PMID:24441171) UniProt PMID:24441171 NCBI chrNW_004624786:10,098,133...10,122,783
Ensembl chrNW_004624786:10,097,294...10,122,893 		JBrowse link
G Pou4f2 POU class 4 homeobox 2 enables ISO (PMID:17145718), (PMID:24643061) UniProt PMID:17145718 PMID:24643061 NCBI chrNW_004624853:5,446,575...5,448,704
Ensembl chrNW_004624853:5,446,694...5,448,637 		JBrowse link
G Pparg peroxisome proliferator activated receptor gamma enables ISO (PMID:29519872) MGI PMID:29519872 NCBI chrNW_004624956:84,673...207,176
Ensembl chrNW_004624956:83,842...149,481 		JBrowse link
G Ppargc1a PPARG coactivator 1 alpha ISO RGD PMID:19948729 RGD:10059643 NCBI chrNW_004624755:7,826,219...8,460,746
Ensembl chrNW_004624755:8,375,596...8,465,297 		JBrowse link
G Prdm1 PR/SET domain 1 enables IEA Ensembl GO_REF:0000107 NCBI chrNW_004624780:16,205,056...16,227,382
Ensembl chrNW_004624780:16,204,838...16,227,390 		JBrowse link
G Prdm15 PR/SET domain 15 enables ISO (PMID:28740264) UniProt PMID:28740264 NCBI chrNW_004624745:28,401,163...28,440,597
Ensembl chrNW_004624745:28,396,485...28,441,450 		JBrowse link
G Rbl1 RB transcriptional corepressor like 1 enables ISO (PMID:25100735)
(PMID:28920576)		 MGI PMID:25100735 PMID:28920576 NCBI chrNW_004624842:2,495,015...2,565,220
Ensembl chrNW_004624842:2,494,911...2,563,421 		JBrowse link
G Rbl2 RB transcriptional corepressor like 2 enables ISO (PMID:25100735)
(PMID:28920576)		 MGI PMID:25100735 PMID:28920576 NCBI chrNW_004624757:3,295,471...3,351,539
Ensembl chrNW_004624757:3,295,479...3,351,928 		JBrowse link
G Rest RE1 silencing transcription factor ISO RGD PMID:37402853 RGD:597538603 NCBI chrNW_004624761:12,464,243...12,495,294 JBrowse link
G Setdb1 SET domain bifurcated histone lysine methyltransferase 1 enables ISO (PMID:24623306)
(PMID:20164836)		 UniProt PMID:20164836 PMID:24623306 NCBI chrNW_004624772:18,855,405...18,894,285
Ensembl chrNW_004624772:18,855,332...18,894,226 		JBrowse link
G Sirt1 sirtuin 1 enables ISO (PMID:22514318) MGI PMID:22514318 NCBI chrNW_004624754:2,304,476...2,332,705
Ensembl chrNW_004624754:2,304,634...2,330,946 		JBrowse link
G Smad3 SMAD family member 3 enables ISO (PMID:18802055) MGI PMID:18802055 NCBI chrNW_004624781:5,795,652...5,890,047
Ensembl chrNW_004624781:5,795,652...5,890,371 		JBrowse link
G Sox10 SRY-box transcription factor 10 ISO RGD PMID:22037207 RGD:12859028 NCBI chrNW_004624752:9,965,015...9,976,244
Ensembl chrNW_004624752:9,965,756...9,973,777 		JBrowse link
G Stat1 signal transducer and activator of transcription 1 enables ISO (PMID:26479788) UniProt PMID:26479788 NCBI chrNW_004624854:5,067,578...5,106,052
Ensembl chrNW_004624854:5,067,535...5,102,106 		JBrowse link
G Suz12 SUZ12 polycomb repressive complex 2 subunit enables ISO (PMID:22770845) MGI PMID:22770845 NCBI chrNW_004624875:4,425,486...4,477,338
Ensembl chrNW_004624875:4,425,418...4,477,909 		JBrowse link
G Taf1 TATA-box binding protein associated factor 1 enables ISO (PMID:22323595) MGI PMID:22323595 NCBI chrNW_004624903:1,698,201...1,774,607 JBrowse link
G Taf10 TATA-box binding protein associated factor 10 enables IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004624817:8,103,065...8,104,435
Ensembl chrNW_004624817:8,103,065...8,104,420 		JBrowse link
G Taf5 TATA-box binding protein associated factor 5 enables ISO (PMID:22323595) MGI PMID:22323595 NCBI chrNW_004624831:2,608,972...2,625,036
Ensembl chrNW_004624831:2,609,819...2,625,182 		JBrowse link
G Tcf7l2 transcription factor 7 like 2 ISO RGD PMID:21901280 RGD:152995490 NCBI chrNW_004624737:33,341,574...33,526,814
Ensembl chrNW_004624737:33,341,029...33,526,928 		JBrowse link
G Tp53 tumor protein p53 enables ISO (PMID:20725088), (PMID:24356969) UniProt PMID:20725088 PMID:24356969 NCBI chrNW_004624786:10,266,316...10,282,664
Ensembl chrNW_004624786:10,263,518...10,271,218 		JBrowse link
G Tp63 tumor protein p63 enables IEA Ensembl GO_REF:0000107 NCBI chrNW_004624730:67,283,444...67,489,808
Ensembl chrNW_004624730:67,286,160...67,489,670 		JBrowse link
G Trim28 tripartite motif containing 28 enables ISO (PMID:24623306) UniProt PMID:24623306 NCBI chrNW_004624832:49,324...56,113 JBrowse link
G Trim33 tripartite motif containing 33 enables ISO (PMID:26624618) MGI PMID:26624618 NCBI chrNW_004624772:10,026,951...10,140,529
Ensembl chrNW_004624772:10,030,640...10,140,607 		JBrowse link
G Usp3 ubiquitin specific peptidase 3 ISO RGD PMID:16279867 RGD:8657120 NCBI chrNW_004624781:8,918,532...9,016,022
Ensembl chrNW_004624781:8,918,526...9,016,070 		JBrowse link
G Wdr13 WD repeat domain 13 enables IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004624893:422,964...434,475
Ensembl chrNW_004624893:422,872...431,515 		JBrowse link
G Zc3h4 zinc finger CCCH-type containing 4 enables ISO (PMID:33913806) UniProt PMID:33913806 NCBI chrNW_004624832:6,571,825...6,609,637 JBrowse link
G Znf609 zinc finger protein 609 enables ISO (PMID:28041881) ARUK-UCL PMID:28041881 NCBI chrNW_004624781:7,906,197...8,086,735 JBrowse link
G Znf683 zinc finger protein 683 enables ISO (PMID:27102484) UniProt PMID:27102484 NCBI chrNW_004624764:10,382,733...10,388,608 JBrowse link
G Znf750 zinc finger protein 750 enables IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004624801:11,519,383...11,528,264
Ensembl chrNW_004624801:11,520,636...11,522,890 		JBrowse link
Term paths to the root
Path 1
Term Annotations click to browse term
  molecular_function 18442
    binding 16071
      chromatin binding 639
        chromatin DNA binding + 116
        euchromatin binding 0
        nucleosome binding + 51
        promoter-specific chromatin binding 83
paths to the root