ONTOLOGY REPORT - ANNOTATIONS |
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Term: | regionalization |
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Accession: | GO:0003002
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browse the term
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Definition: | The pattern specification process that results in the subdivision of an axis or axes in space to define an area or volume in which specific patterns of cell differentiation will take place or in which cells interpret a specific environment. |
Synonyms: | related_synonym: | pattern formation |
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Pax6 |
paired box 6 |
acts_upstream_of_or_within |
ISO |
MGI:1856155|MGI:1856158 (PMID:24528677), (PMID:9169845) |
RGD |
PMID:9169845 PMID:24528677 |
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NCBI chr 3:92,128,772...92,157,022
Ensembl chr 3:92,135,637...92,157,014
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Wnt8a |
Wnt family member 8A |
acts_upstream_of_or_within |
ISO |
(PMID:16256739) |
RGD |
PMID:16256739 |
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NCBI chr18:26,137,690...26,143,283
Ensembl chr18:26,137,690...26,143,283
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Aurka |
aurora kinase A |
involved_in acts_upstream_of_or_within |
IEA ISO |
GO_REF:0000107 MGI:3836420 (PMID:22939930) |
Ensembl RGD |
PMID:22939930 |
GO_REF:0000107 |
NCBI chr 3:161,128,309...161,144,524
Ensembl chr 3:161,128,313...161,144,390
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Bmp4 |
bone morphogenetic protein 4 |
involved_in acts_upstream_of_or_within |
IEA ISO |
GO_REF:0000107 MGI:104903 (PMID:10964473) |
Ensembl RGD |
PMID:10964473 |
GO_REF:0000107 |
NCBI chr15:19,618,538...19,633,494
Ensembl chr15:19,618,542...19,623,306
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Cdx2 |
caudal type homeo box 2 |
involved_in |
IBA |
GO_REF:0000033 |
GO_Central |
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GO_REF:0000033 |
NCBI chr12:7,726,798...7,733,142
Ensembl chr12:7,726,798...7,733,142
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Cdx4 |
caudal type homeo box 4 |
involved_in |
IBA |
GO_REF:0000033 |
GO_Central |
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GO_REF:0000033 |
NCBI chr X:68,326,874...68,335,461
Ensembl chr X:68,326,874...68,335,461
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Cer1 |
cerberus 1, DAN family BMP antagonist |
acts_upstream_of_or_within |
ISO |
MGI:107405|MGI:98658 (PMID:15004567), (PMID:18241853) |
RGD |
PMID:15004567 PMID:18241853 |
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NCBI chr 5:97,306,427...97,309,783
Ensembl chr 5:97,306,431...97,309,783
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Cripto |
cripto, EGF-CFC family member |
acts_upstream_of_or_within |
ISO |
MGI:1201414 (PMID:18241853) |
RGD |
PMID:18241853 |
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NCBI chr 8:110,924,774...110,938,545
Ensembl chr 8:110,925,024...110,930,308
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Ctnnb1 |
catenin beta 1 |
involved_in acts_upstream_of_or_within |
IEA ISO |
GO_REF:0000107 MGI:2148590 (PMID:10662781) |
Ensembl RGD |
PMID:10662781 |
GO_REF:0000107 |
NCBI chr 8:120,640,008...120,667,110
Ensembl chr 8:120,639,995...120,667,111
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Ddit3 |
DNA-damage inducible transcript 3 |
involved_in |
ISO |
(PMID:16434966) |
RGD |
PMID:16434966 |
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NCBI chr 7:63,115,645...63,121,203
Ensembl chr 7:63,116,380...63,121,201
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Gpc3 |
glypican 3 |
involved_in acts_upstream_of_or_within |
IEA ISO |
GO_REF:0000107 MGI:88180 (PMID:10964473) |
Ensembl RGD |
PMID:10964473 |
GO_REF:0000107 |
NCBI chr X:131,868,986...132,236,824
Ensembl chr X:131,868,990...132,236,798
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Hey1 |
hes-related family bHLH transcription factor with YRPW motif 1 |
acts_upstream_of_or_within |
ISO |
MGI:1341884 (PMID:15680351) |
RGD |
PMID:15680351 |
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NCBI chr 2:93,096,605...93,100,316
Ensembl chr 2:93,095,498...93,100,312
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Hey2 |
hes-related family bHLH transcription factor with YRPW motif 2 |
acts_upstream_of_or_within |
ISO |
MGI:1341800 (PMID:15680351) |
RGD |
PMID:15680351 |
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NCBI chr 1:26,822,131...26,832,218
Ensembl chr 1:26,822,131...26,832,218
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Ldb1 |
LIM domain binding 1 |
acts_upstream_of_or_within |
ISO |
MGI:2449177 (PMID:12490556) |
RGD |
PMID:12490556 |
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NCBI chr 1:244,864,168...244,890,007
Ensembl chr 1:244,877,173...244,890,013
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Lefty1 |
left right determination factor 1 |
involved_in acts_upstream_of_or_within |
IBA ISO |
GO_REF:0000033 MGI:1201414 (PMID:15004567) |
GO_Central RGD |
PMID:15004567 |
GO_REF:0000033 |
NCBI chr13:92,649,226...92,659,722
Ensembl chr13:92,656,323...92,659,720
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Lefty2 |
Left-right determination factor 2 |
involved_in |
IBA |
GO_REF:0000033 |
GO_Central |
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GO_REF:0000033 |
NCBI chr13:92,610,185...92,620,918
Ensembl chr13:92,615,360...92,619,880
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Lhx1 |
LIM homeobox 1 |
involved_in acts_upstream_of_or_within |
ISS ISO |
GO_REF:0000024 MGI:2443342 (PMID:10529425) |
UniProt RGD |
PMID:10529425 |
GO_REF:0000024 |
NCBI chr10:69,396,829...69,403,617
Ensembl chr10:69,396,829...69,403,617
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Nodal |
nodal growth differentiation factor |
acts_upstream_of_or_within |
ISO |
MGI:2158732 (PMID:11311163) |
RGD |
PMID:11311163 |
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NCBI chr20:29,368,436...29,376,837
Ensembl chr20:29,368,436...29,376,837
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Pgap1 |
post-GPI attachment to proteins inositol deacylase 1 |
involved_in acts_upstream_of_or_within |
IEA ISO |
GO_REF:0000107 MGI:1856621|MGI:99783 (PMID:10529425) |
Ensembl RGD |
PMID:10529425 |
GO_REF:0000107 |
NCBI chr 9:55,975,574...56,044,325
Ensembl chr 9:55,975,667...56,044,464
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Rnf2 |
ring finger protein 2 |
involved_in acts_upstream_of_or_within |
IEA ISO |
GO_REF:0000107 MGI:2447529 (PMID:12183370) |
Ensembl RGD |
PMID:12183370 |
GO_REF:0000107 |
NCBI chr13:63,553,964...63,584,047
Ensembl chr13:63,554,862...63,583,099
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Six2 |
SIX homeobox 2 |
involved_in |
ISO |
(PMID:18321982) |
RGD |
PMID:18321982 |
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NCBI chr 6:8,974,859...8,981,345
Ensembl chr 6:8,967,157...8,981,193
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Ski |
Ski proto-oncogene |
acts_upstream_of_or_within |
ISO |
MGI:2177555 (PMID:11731796) |
RGD |
PMID:11731796 |
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NCBI chr 5:165,713,525...165,782,134
Ensembl chr 5:165,714,093...165,782,733
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Tbx18 |
T-box transcription factor 18 |
acts_upstream_of_or_within |
ISO |
MGI:3044914 (PMID:15155583) |
RGD |
PMID:15155583 |
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NCBI chr 8:88,652,054...88,680,081
Ensembl chr 8:88,652,054...88,680,058
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Wls |
Wnt ligand secretion mediator |
involved_in |
ISS ISO |
GO_REF:0000024 (PMID:19841259) |
UniProt RGD |
PMID:19841259 |
GO_REF:0000024 |
NCBI chr 2:248,931,885...249,047,248
Ensembl chr 2:248,931,903...249,048,298
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Wnt3 |
Wnt family member 3 |
acts_upstream_of_or_within |
ISO |
MGI:2450902 (PMID:18028899) |
RGD |
PMID:18028899 |
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NCBI chr10:88,680,198...88,724,170
Ensembl chr10:88,680,248...88,724,099
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Cripto |
cripto, EGF-CFC family member |
acts_upstream_of_or_within |
ISO |
MGI:1934206 (PMID:9790191) |
RGD |
PMID:9790191 |
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NCBI chr 8:110,924,774...110,938,545
Ensembl chr 8:110,925,024...110,930,308
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Frs2 |
fibroblast growth factor receptor substrate 2 |
acts_upstream_of_or_within |
ISO |
MGI:3580390 (PMID:15870281) |
RGD |
PMID:15870281 |
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NCBI chr 7:52,711,255...52,792,738
Ensembl chr 7:52,711,257...52,792,743
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Fzd5 |
frizzled class receptor 5 |
involved_in |
ISO IEA |
(PMID:9054360) GO_REF:0000107 |
RGD Ensembl |
PMID:9054360 |
GO_REF:0000107 |
NCBI chr 9:66,113,096...66,120,276
Ensembl chr 9:66,113,112...66,121,457
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Tasor |
transcription activation suppressor |
involved_in |
ISO |
(PMID:28839193) |
RGD |
PMID:28839193 |
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NCBI chr16:2,606,807...2,669,902
Ensembl chr16:2,603,936...2,667,292
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Tbx3 |
T-box transcription factor 3 |
involved_in |
ISS ISO |
GO_REF:0000024 (PMID:9207801) |
UniProt RGD |
PMID:9207801 |
GO_REF:0000024 |
NCBI chr12:36,879,924...36,894,849
Ensembl chr12:36,881,445...36,893,708
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Tcf7l1 |
transcription factor 7 like 1 |
acts_upstream_of_or_within |
ISO |
MGI:3044616 (PMID:14668413) |
RGD |
PMID:14668413 |
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NCBI chr 4:104,680,734...104,846,086
Ensembl chr 4:104,680,739...104,845,287
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Wnt5a |
Wnt family member 5A |
involved_in |
IEA ISO |
GO_REF:0000107 (PMID:9054360) |
Ensembl RGD |
PMID:9054360 |
GO_REF:0000107 |
NCBI chr16:3,697,032...3,718,230
Ensembl chr16:3,697,032...3,718,234
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Acvr2a |
activin A receptor type 2A |
involved_in acts_upstream_of_or_within |
IEA ISO |
GO_REF:0000107 MGI:87912 (PMID:10452853), (PMID:16991118) |
Ensembl RGD |
PMID:10452853 PMID:16991118 |
GO_REF:0000107 |
NCBI chr 3:33,204,961...33,292,673
Ensembl chr 3:33,205,523...33,289,968
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Acvr2b |
activin A receptor type 2B |
involved_in acts_upstream_of_or_within |
ISO IEA |
(PMID:9916847) MGI:102806|MGI:1095407|MGI:1857709|MGI:98728 (PMID:10452853), (PMID:15542835), (PMID:16845371), (PMID:16991118), (PMID:9242489) GO_REF:0000107 |
RGD Ensembl |
PMID:9242489 PMID:9916847 PMID:10452853 PMID:15542835 PMID:16845371 PMID:16991118 More...
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GO_REF:0000107 |
NCBI chr 8:119,138,901...119,178,477
Ensembl chr 8:119,138,812...119,170,458
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Aldh1a2 |
aldehyde dehydrogenase 1 family, member A2 |
acts_upstream_of_or_within |
ISO |
MGI:1096359|MGI:1857891|MGI:2180721|MGI:2679699 (PMID:15652703), (PMID:15872003), (PMID:16368932), (PMID:17067568) |
RGD |
PMID:15652703 PMID:15872003 PMID:16368932 PMID:17067568 |
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NCBI chr 8:71,877,850...71,957,107
Ensembl chr 8:71,877,850...71,957,107
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Alx1 |
ALX homeobox 1 |
acts_upstream_of_or_within |
ISO |
MGI:108359 (PMID:9847249) |
RGD |
PMID:9847249 |
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NCBI chr 7:38,157,626...38,177,220
Ensembl chr 7:38,147,117...38,177,220
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Alx4 |
ALX homeobox 4 |
acts_upstream_of_or_within |
ISO |
MGI:104621|MGI:1857484 (PMID:9374397), (PMID:9847249) |
RGD |
PMID:9374397 PMID:9847249 |
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NCBI chr 3:79,611,682...79,648,260
Ensembl chr 3:79,611,719...79,648,260
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Apc |
APC regulator of WNT signaling pathway |
acts_upstream_of_or_within |
ISO |
MGI:2449944 (PMID:12645927) |
RGD |
PMID:12645927 |
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NCBI chr18:25,828,558...25,925,511
Ensembl chr18:25,864,222...25,922,696
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Arc |
activity-regulated cytoskeleton-associated protein |
acts_upstream_of_or_within |
ISO |
MGI:2386454 (PMID:10727859) |
RGD |
PMID:10727859 |
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NCBI chr 7:106,555,968...106,559,697
Ensembl chr 7:106,555,785...106,559,378
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Barx1 |
BARX homeobox 1 |
acts_upstream_of_or_within |
ISO |
MGI:3578634 (PMID:17855428) |
RGD |
PMID:17855428 |
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NCBI chr17:15,990,412...15,993,887
Ensembl chr17:15,990,412...15,993,887
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Bmpr1a |
bone morphogenetic protein receptor type 1A |
acts_upstream_of_or_within |
ISO |
MGI:2158342 (PMID:15136140) |
RGD |
PMID:15136140 |
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NCBI chr16:9,736,390...9,829,825
Ensembl chr16:9,736,630...9,780,616
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Bmpr2 |
bone morphogenetic protein receptor type 2 |
acts_upstream_of_or_within |
ISO |
MGI:2158503|MGI:87912 (PMID:10772805), (PMID:15542835) |
RGD |
PMID:10772805 PMID:15542835 |
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NCBI chr 9:61,192,718...61,307,280
Ensembl chr 9:61,190,566...61,301,809
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Bptf |
bromodomain PHD finger transcription factor |
acts_upstream_of_or_within |
ISO |
MGI:3823037|MGI:3841299 (PMID:18794365), (PMID:18974875) |
RGD |
PMID:18794365 PMID:18974875 |
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NCBI chr10:91,980,279...92,082,731
Ensembl chr10:91,982,758...92,082,769
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Btg2 |
BTG anti-proliferation factor 2 |
acts_upstream_of_or_within |
ISO |
MGI:3525505 (PMID:15542835) |
RGD |
PMID:15542835 |
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NCBI chr13:45,531,881...45,535,642
Ensembl chr13:45,531,925...45,535,628
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Cdon |
cell adhesion associated, oncogene regulated |
involved_in acts_upstream_of_or_within |
IEA ISO |
GO_REF:0000107 MGI:2653120 (PMID:19754878) |
Ensembl RGD |
PMID:19754878 |
GO_REF:0000107 |
NCBI chr 8:33,775,123...33,861,635
Ensembl chr 8:33,806,183...33,859,033
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Cdx1 |
caudal type homeo box 1 |
acts_upstream_of_or_within involved_in |
ISO IEA |
MGI:2154514|MGI:97858 (PMID:11784046), (PMID:7585967) GO_REF:0000107 |
RGD Ensembl |
PMID:7585967 PMID:11784046 |
GO_REF:0000107 |
NCBI chr18:54,472,587...54,490,913
Ensembl chr18:54,473,444...54,490,814
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Cdx2 |
caudal type homeo box 2 |
acts_upstream_of_or_within |
ISO |
MGI:88362 (PMID:19853565) |
RGD |
PMID:19853565 |
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NCBI chr12:7,726,798...7,733,142
Ensembl chr12:7,726,798...7,733,142
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Cdx4 |
caudal type homeo box 4 |
acts_upstream_of_or_within |
ISO |
MGI:88361 (PMID:19853565) |
RGD |
PMID:19853565 |
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NCBI chr X:68,326,874...68,335,461
Ensembl chr X:68,326,874...68,335,461
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Celsr1 |
cadherin, EGF LAG seven-pass G-type receptor 1 |
acts_upstream_of_or_within |
ISO |
MGI:2668337|MGI:4430218 (PMID:18849982), (PMID:19357712) |
RGD |
PMID:18849982 PMID:19357712 |
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NCBI chr 7:116,987,616...117,125,035
Ensembl chr 7:116,987,605...117,125,164
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Cer1 |
cerberus 1, DAN family BMP antagonist |
acts_upstream_of_or_within |
ISO |
(PMID:9501024) |
RGD |
PMID:9501024 |
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NCBI chr 5:97,306,427...97,309,783
Ensembl chr 5:97,306,431...97,309,783
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Cfc1 |
cripto, FRL-1, cryptic family 1 |
involved_in acts_upstream_of_or_within |
IBA ISO |
GO_REF:0000033 MGI:97451 (PMID:11412024) |
GO_Central RGD |
PMID:11412024 |
GO_REF:0000033 |
NCBI chr 9:36,742,106...36,751,931
Ensembl chr 9:36,739,071...36,751,930
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Cripto |
cripto, EGF-CFC family member |
involved_in |
IBA |
GO_REF:0000033 |
GO_Central |
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GO_REF:0000033 |
NCBI chr 8:110,924,774...110,938,545
Ensembl chr 8:110,925,024...110,930,308
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Crkl |
CRK like proto-oncogene, adaptor protein |
acts_upstream_of_or_within |
ISO |
MGI:98493 (PMID:16399080) |
RGD |
PMID:16399080 |
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NCBI chr11:83,528,788...83,563,214
Ensembl chr11:83,526,530...83,563,238
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Ctnnbip1 |
catenin, beta-interacting protein 1 |
acts_upstream_of_or_within |
ISO |
MGI:3045424 (PMID:15148409) |
RGD |
PMID:15148409 |
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NCBI chr 5:159,961,961...160,010,942
Ensembl chr 5:159,961,928...160,010,939
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Cyp26a1 |
cytochrome P450, family 26, subfamily a, polypeptide 1 |
acts_upstream_of_or_within |
ISO |
MGI:2183292|MGI:2679699 (PMID:17067568) |
RGD |
PMID:17067568 |
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NCBI chr 1:235,471,368...235,475,204
Ensembl chr 1:235,471,298...235,475,204
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Cyp26c1 |
cytochrome P450, family 26, subfamily C, polypeptide 1 |
acts_upstream_of_or_within |
ISO |
MGI:1096359 (PMID:17067568) |
RGD |
PMID:17067568 |
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NCBI chr 1:235,458,961...235,468,433
Ensembl chr 1:235,459,356...235,466,842
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Emx2 |
empty spiracles homeobox 2 |
acts_upstream_of_or_within |
ISO |
MGI:2148858|MGI:97490 (PMID:12196586), (PMID:15917450) |
RGD |
PMID:12196586 PMID:15917450 |
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NCBI chr 1:258,626,584...258,633,594
Ensembl chr 1:258,626,584...258,633,594
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Foxa2 |
forkhead box A2 |
acts_upstream_of_or_within |
ISO |
MGI:99783 (PMID:10498685) |
RGD |
PMID:10498685 |
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NCBI chr 3:135,470,123...135,474,326
Ensembl chr 3:135,470,131...135,474,326
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Foxh1 |
forkhead box H1 |
acts_upstream_of_or_within |
ISO |
MGI:2387775 (PMID:11358868) |
RGD |
PMID:11358868 |
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NCBI chr 7:108,387,969...108,391,566
Ensembl chr 7:108,387,969...108,390,049
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Fuz |
fuzzy planar cell polarity protein |
acts_upstream_of_or_within |
ISO |
MGI:4346364 (PMID:19877275) |
RGD |
PMID:19877275 |
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NCBI chr 1:95,379,542...95,384,532
Ensembl chr 1:95,379,587...95,384,530
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Gdf11 |
growth differentiation factor 11 |
acts_upstream_of_or_within |
ISO |
MGI:2449672|MGI:5544775 (PMID:10391213), (PMID:23918385) |
RGD |
PMID:10391213 PMID:23918385 |
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NCBI chr 7:1,311,732...1,325,211
Ensembl chr 7:1,311,732...1,320,725
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Gli2 |
GLI family zinc finger 2 |
acts_upstream_of_or_within |
ISO |
MGI:95729 (PMID:22841643) |
RGD |
PMID:22841643 |
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NCBI chr13:29,946,882...30,163,589
Ensembl chr13:29,946,809...30,163,574
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Gli3 |
GLI family zinc finger 3 |
acts_upstream_of_or_within |
ISO |
MGI:1856276|MGI:3798847|MGI:95728 (PMID:15315762), (PMID:22841643) |
RGD |
PMID:15315762 PMID:22841643 |
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NCBI chr17:49,438,567...49,709,712
Ensembl chr17:49,438,567...49,709,712
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Grsf1 |
G-rich RNA sequence binding factor 1 |
acts_upstream_of_or_within |
ISO |
(PMID:15857914) |
RGD |
PMID:15857914 |
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NCBI chr14:19,412,944...19,429,364
Ensembl chr14:19,412,156...19,429,362
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Hhex |
hematopoietically expressed homeobox |
involved_in |
ISO |
(PMID:16936074) |
RGD |
PMID:16936074 |
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NCBI chr 1:235,190,455...235,196,042
Ensembl chr 1:235,190,455...235,196,042
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|
G |
Hipk1 |
homeodomain interacting protein kinase 1 |
involved_in acts_upstream_of_or_within |
IEA ISO |
GO_REF:0000107 MGI:1314872 (PMID:16537918) |
Ensembl RGD |
PMID:16537918 |
GO_REF:0000107 |
NCBI chr 2:191,248,817...191,299,787
Ensembl chr 2:191,248,817...191,298,902
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|
G |
Hipk2 |
homeodomain interacting protein kinase 2 |
acts_upstream_of_or_within |
ISO |
MGI:1314872 (PMID:16537918) |
RGD |
PMID:16537918 |
|
NCBI chr 4:67,439,327...67,619,223
Ensembl chr 4:67,440,501...67,619,223
|
|
G |
Hnf1b |
HNF1 homeobox B |
involved_in acts_upstream_of_or_within |
IEA ISO |
GO_REF:0000107 MGI:2176174|MGI:2670936 (PMID:15872003) |
Ensembl RGD |
PMID:15872003 |
GO_REF:0000107 |
NCBI chr10:68,735,894...68,789,888
Ensembl chr10:68,735,894...68,789,888
|
|
G |
Hoxa1 |
homeobox A1 |
acts_upstream_of_or_within |
ISO |
MGI:3056069|MGI:96182 (PMID:10529420), (PMID:15367676) |
RGD |
PMID:10529420 PMID:15367676 |
|
NCBI chr 4:81,255,814...81,258,587
Ensembl chr 4:81,255,883...81,258,504
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|
G |
Hoxa10 |
homeobox A10 |
acts_upstream_of_or_within |
ISO |
MGI:96192|MGI:96202 (PMID:12869760) |
RGD |
PMID:12869760 |
|
NCBI chr 4:81,331,591...81,340,878
Ensembl chr 4:81,331,591...81,340,919
|
|
G |
Hoxa11 |
homeobox A11 |
acts_upstream_of_or_within |
ISO |
MGI:96193|MGI:96203 (PMID:12869760) |
RGD |
PMID:12869760 |
|
NCBI chr 4:81,342,527...81,346,189
Ensembl chr 4:81,342,528...81,346,232
|
|
G |
Hoxa2 |
homeobox A2 |
involved_in acts_upstream_of_or_within |
IEA ISO |
GO_REF:0000107 MGI:1857626 (PMID:9367425) |
Ensembl RGD |
PMID:9367425 |
GO_REF:0000107 |
NCBI chr 4:81,262,668...81,266,970
Ensembl chr 4:81,262,768...81,265,044
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|
G |
Hoxa3 |
homeobox A3 |
involved_in acts_upstream_of_or_within |
IBA ISO |
GO_REF:0000033 MGI:96184|MGI:96207 (PMID:7913519), (PMID:9441667) |
GO_Central RGD |
PMID:7913519 PMID:9441667 |
GO_REF:0000033 |
NCBI chr 4:81,269,243...81,313,218
Ensembl chr 4:81,269,243...81,313,218
|
|
G |
Hoxa4 |
homeo box A4 |
acts_upstream_of_or_within |
ISO |
MGI:2150391|MGI:96185|MGI:96208 (PMID:7628700), (PMID:7918106) |
RGD |
PMID:7628700 PMID:7918106 |
|
NCBI chr 4:81,289,677...81,291,685
Ensembl chr 4:81,289,682...81,291,685
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|
G |
Hoxa5 |
homeo box A5 |
involved_in acts_upstream_of_or_within |
IBA ISO |
GO_REF:0000033 MGI:2150397|MGI:3723623|MGI:96186|MGI:96196 (PMID:17417799), (PMID:17626057), (PMID:7901120), (PMID:9603431) |
GO_Central RGD |
PMID:7901120 PMID:9603431 PMID:17417799 PMID:17626057 |
GO_REF:0000033 |
NCBI chr 4:81,302,341...81,306,234
Ensembl chr 4:81,302,353...81,306,234
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|
G |
Hoxa6 |
homeobox A6 |
involved_in acts_upstream_of_or_within |
IBA ISO |
GO_REF:0000033 MGI:2150392|MGI:96187|MGI:96197 (PMID:17626057), (PMID:7918106) |
GO_Central RGD |
PMID:7918106 PMID:17626057 |
GO_REF:0000033 |
NCBI chr 4:81,304,918...81,313,184
Ensembl chr 4:81,306,407...81,308,850
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|
G |
Hoxa7 |
homeobox A7 |
involved_in acts_upstream_of_or_within |
IEA ISO |
GO_REF:0000107 MGI:96188 (PMID:9784603) |
Ensembl RGD |
PMID:9784603 |
GO_REF:0000107 |
NCBI chr 4:81,315,730...81,317,629
Ensembl chr 4:81,314,625...81,317,659
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|
G |
Hoxa9 |
homeobox A9 |
involved_in acts_upstream_of_or_within |
IBA ISO |
GO_REF:0000033 MGI:2150411|MGI:96190|MGI:96199|MGI:96210 (PMID:17626057), (PMID:8625797), (PMID:9013929) |
GO_Central RGD |
PMID:8625797 PMID:9013929 PMID:17626057 |
GO_REF:0000033 |
NCBI chr 4:81,323,235...81,329,344
Ensembl chr 4:81,323,382...81,326,358
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|
G |
Hoxb1 |
homeo box B1 |
acts_upstream_of_or_within |
ISO |
MGI:96170|MGI:96183|MGI:96184|MGI:96185|MGI:96186|MGI:96187|MGI:96188|MGI:96189|MGI:96190 (PMID:10529420), (PMID:10885747) |
RGD |
PMID:10529420 PMID:10885747 |
|
NCBI chr10:81,331,507...81,332,928
Ensembl chr10:81,331,507...81,332,836
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|
G |
Hoxb2 |
homeobox B2 |
acts_upstream_of_or_within |
ISO |
MGI:2151772|MGI:96182|MGI:96184|MGI:96185|MGI:96186|MGI:96187|MGI:96188|MGI:96189|MGI:96190 (PMID:10885747), (PMID:9012503) |
RGD |
PMID:9012503 PMID:10885747 |
|
NCBI chr10:81,317,828...81,320,220
Ensembl chr10:81,318,026...81,320,192
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|
G |
Hoxb3 |
homeo box B3 |
involved_in acts_upstream_of_or_within |
IBA ISO |
GO_REF:0000033 MGI:96175|MGI:96182|MGI:96183|MGI:96185|MGI:96186|MGI:96187|MGI:96188|MGI:96189|MGI:96190|MGI:96207 (PMID:10885747), (PMID:9441667) |
GO_Central RGD |
PMID:9441667 PMID:10885747 |
GO_REF:0000033 |
NCBI chr10:81,258,739...81,314,134
Ensembl chr10:81,299,357...81,313,107
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|
G |
Hoxb4 |
homeo box B4 |
acts_upstream_of_or_within |
ISO |
MGI:96176|MGI:96183|MGI:96184|MGI:96186|MGI:96187|MGI:96188|MGI:96189|MGI:96190 (PMID:10885747), (PMID:7628700), (PMID:9012503) |
RGD |
PMID:7628700 PMID:9012503 PMID:10885747 |
|
NCBI chr10:81,284,552...81,287,134
Ensembl chr10:81,284,552...81,287,128
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|
G |
Hoxb5 |
homeo box B5 |
involved_in acts_upstream_of_or_within |
IBA ISO |
GO_REF:0000033 MGI:2151484|MGI:96177|MGI:96182|MGI:96183|MGI:96184|MGI:96185|MGI:96187|MGI:96188|MGI:96189|MGI:96190|MGI:96196 (PMID:10885747), (PMID:17626057), (PMID:7828847) |
GO_Central RGD |
PMID:7828847 PMID:10885747 PMID:17626057 |
GO_REF:0000033 |
NCBI chr10:81,269,372...81,271,580
Ensembl chr10:81,269,372...81,271,580
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|
G |
Hoxb6 |
homeo box B6 |
involved_in acts_upstream_of_or_within |
IBA ISO |
GO_REF:0000033 MGI:2151485|MGI:96178|MGI:96182|MGI:96183|MGI:96184|MGI:96185|MGI:96186|MGI:96188|MGI:96189|MGI:96190|MGI:96197 (PMID:10885747), (PMID:17626057), (PMID:7828847) |
GO_Central RGD |
PMID:7828847 PMID:10885747 PMID:17626057 |
GO_REF:0000033 |
NCBI chr10:81,258,726...81,267,458
Ensembl chr10:81,265,056...81,267,449
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G |
Hoxb7 |
homeo box B7 |
involved_in acts_upstream_of_or_within |
IBA ISO |
GO_REF:0000033 MGI:2150401|MGI:96179|MGI:96182|MGI:96183|MGI:96184|MGI:96185|MGI:96186|MGI:96187|MGI:96189|MGI:96190 (PMID:10885747), (PMID:9784603) |
GO_Central RGD |
PMID:9784603 PMID:10885747 |
GO_REF:0000033 |
NCBI chr10:81,252,616...81,256,034
Ensembl chr10:81,252,553...81,256,034
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|
G |
Hoxb8 |
homeo box B8 |
involved_in acts_upstream_of_or_within |
IEA ISO |
GO_REF:0000107 MGI:1934178|MGI:2683089|MGI:96182|MGI:96183|MGI:96184|MGI:96185|MGI:96186|MGI:96187|MGI:96188|MGI:96190|MGI:96198|MGI:96209 (PMID:10559485), (PMID:10885747), (PMID:11311170), (PMID:14623233) |
Ensembl RGD |
PMID:10559485 PMID:10885747 PMID:11311170 PMID:14623233 |
GO_REF:0000107 |
NCBI chr10:81,248,313...81,251,261
Ensembl chr10:81,248,887...81,250,638
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|
G |
Hoxb9 |
homeo box B9 |
involved_in acts_upstream_of_or_within |
IBA ISO |
GO_REF:0000033 MGI:2150429|MGI:96180|MGI:96182|MGI:96183|MGI:96184|MGI:96185|MGI:96186|MGI:96187|MGI:96188|MGI:96189|MGI:96199|MGI:96210 (PMID:10885747), (PMID:17626057), (PMID:9013929) |
GO_Central RGD |
PMID:9013929 PMID:10885747 PMID:17626057 |
GO_REF:0000033 |
NCBI chr10:81,237,312...81,240,818
Ensembl chr10:81,237,312...81,240,818
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|
G |
Hoxc10 |
homeo box C10 |
acts_upstream_of_or_within |
ISO |
MGI:96171|MGI:96202 (PMID:12869760) |
RGD |
PMID:12869760 |
|
NCBI chr 7:134,103,741...134,108,966
Ensembl chr 7:134,103,643...134,108,966
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|
G |
Hoxc11 |
homeobox C11 |
acts_upstream_of_or_within |
ISO |
MGI:96172|MGI:96203 (PMID:12869760) |
RGD |
PMID:12869760 |
|
NCBI chr 7:134,091,224...134,094,738
Ensembl chr 7:134,091,552...134,094,738
|
|
G |
Hoxc13 |
homeobox C13 |
acts_upstream_of_or_within |
ISO |
MGI:1926422 (PMID:9420327) |
RGD |
PMID:9420327 |
|
NCBI chr 7:134,058,640...134,065,479
Ensembl chr 7:134,058,640...134,064,800
|
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G |
Hoxc4 |
homeo box C4 |
acts_upstream_of_or_within involved_in |
ISO IBA |
MGI:1857570|MGI:2150683 (PMID:8626021), (PMID:8660891) GO_REF:0000033 |
RGD GO_Central |
PMID:8626021 PMID:8660891 |
GO_REF:0000033 |
NCBI chr 7:134,135,279...134,173,133
Ensembl chr 7:134,170,591...134,173,133
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|
G |
Hoxc5 |
homeo box C5 |
involved_in acts_upstream_of_or_within |
IBA ISO |
GO_REF:0000033 MGI:96177|MGI:96186 (PMID:17626057) |
GO_Central RGD |
PMID:17626057 |
GO_REF:0000033 |
NCBI chr 7:134,150,988...134,154,410
Ensembl chr 7:134,150,988...134,154,410
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|
G |
Hoxc6 |
homeo box C6 |
involved_in acts_upstream_of_or_within |
IBA ISO |
GO_REF:0000033 MGI:96178|MGI:96187 (PMID:17626057) |
GO_Central RGD |
PMID:17626057 |
GO_REF:0000033 |
NCBI chr 7:134,138,017...134,148,899
Ensembl chr 7:134,135,502...134,148,392
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|
G |
Hoxc8 |
homeobox C8 |
involved_in acts_upstream_of_or_within |
IEA ISO |
GO_REF:0000107 MGI:2149030|MGI:96189|MGI:96209 (PMID:11311170) |
Ensembl RGD |
PMID:11311170 |
GO_REF:0000107 |
NCBI chr 7:134,127,937...134,130,503
Ensembl chr 7:134,127,913...134,130,503
|
|
G |
Hoxc9 |
homeobox C9 |
acts_upstream_of_or_within |
ISO |
MGI:2150685|MGI:96180|MGI:96190|MGI:96210 (PMID:17626057), (PMID:7547473) |
RGD |
PMID:7547473 PMID:17626057 |
|
NCBI chr 7:134,118,817...134,121,497
Ensembl chr 7:134,118,817...134,121,492
|
|
G |
Hoxd10 |
homeo box D10 |
acts_upstream_of_or_within |
ISO |
MGI:96171|MGI:96192|MGI:96210 (PMID:10642795), (PMID:12869760) |
RGD |
PMID:10642795 PMID:12869760 |
|
NCBI chr 3:59,594,516...59,597,725
Ensembl chr 3:59,594,516...59,597,725
|
|
G |
Hoxd11 |
homeobox D11 |
acts_upstream_of_or_within |
ISO |
MGI:96172|MGI:96193 (PMID:12869760) |
RGD |
PMID:12869760 |
|
NCBI chr 3:59,584,840...59,587,257
Ensembl chr 3:59,585,039...59,586,783
|
|
G |
Hoxd13 |
homeo box D13 |
acts_upstream_of_or_within |
ISO |
MGI:1857871 (PMID:8106170) |
RGD |
PMID:8106170 |
|
NCBI chr 3:59,570,647...59,573,963
Ensembl chr 3:59,570,646...59,573,963
|
|
G |
Hoxd3 |
homeo box D3 |
involved_in acts_upstream_of_or_within |
IEA ISO |
GO_REF:0000107 MGI:1857959|MGI:96175|MGI:96184 (PMID:7910549), (PMID:7913519), (PMID:9441667) |
Ensembl RGD |
PMID:7910549 PMID:7913519 PMID:9441667 |
GO_REF:0000107 |
NCBI chr 3:59,638,708...59,650,282
Ensembl chr 3:59,638,708...59,650,282
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|
G |
Hoxd4 |
homeo box D4 |
involved_in acts_upstream_of_or_within |
IBA ISO |
GO_REF:0000033 MGI:2151488|MGI:96176 (PMID:7628700), (PMID:7750651) |
GO_Central RGD |
PMID:7628700 PMID:7750651 |
GO_REF:0000033 |
NCBI chr 3:59,614,464...59,634,042
Ensembl chr 3:59,614,464...59,631,528
|
|
G |
Hoxd8 |
homeobox D8 |
acts_upstream_of_or_within |
ISO |
MGI:2151815|MGI:96189|MGI:96198 (PMID:11311170) |
RGD |
PMID:11311170 |
|
NCBI chr 3:59,607,793...59,610,359
Ensembl chr 3:59,607,996...59,610,361
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G |
Hoxd9 |
homeo box D9 |
involved_in acts_upstream_of_or_within |
IEA ISO IBA |
GO_REF:0000107 MGI:2150414|MGI:96180|MGI:96190|MGI:96199|MGI:96202 (PMID:10642795), (PMID:17626057), (PMID:8625797) GO_REF:0000033 |
Ensembl RGD GO_Central |
PMID:8625797 PMID:10642795 PMID:17626057 |
GO_REF:0000033 GO_REF:0000107 |
NCBI chr 3:59,600,575...59,602,755
Ensembl chr 3:59,600,575...59,602,754
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G |
Htt |
huntingtin |
acts_upstream_of_or_within |
ISO |
MGI:1857180 (PMID:16109169) |
RGD |
PMID:16109169 |
|
NCBI chr14:75,845,836...75,996,094
Ensembl chr14:75,845,836...75,995,070
|
|
G |
Ifitm1 |
interferon induced transmembrane protein 1 |
acts_upstream_of_or_within |
ISO |
(PMID:15857914) |
RGD |
PMID:15857914 |
|
NCBI chr 1:196,067,163...196,069,169
Ensembl chr 1:196,067,963...196,069,169
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|
G |
Ift88 |
intraflagellar transport 88 |
acts_upstream_of_or_within |
ISO |
MGI:2157527|MGI:3027342 (PMID:12701101), (PMID:15930098) |
RGD |
PMID:12701101 PMID:15930098 |
|
NCBI chr15:31,573,325...31,666,068
Ensembl chr15:31,573,376...31,672,147
|
|
G |
Kif3a |
kinesin family member 3a |
acts_upstream_of_or_within |
ISO |
MGI:1861960 (PMID:10220415) |
RGD |
PMID:10220415 |
|
NCBI chr10:37,725,930...37,761,183
Ensembl chr10:37,725,970...37,759,191
|
|
G |
Kmt2a |
lysine methyltransferase 2A |
acts_upstream_of_or_within |
ISO |
MGI:1932339 (PMID:15741318), (PMID:16618927) |
RGD |
PMID:15741318 PMID:16618927 |
|
NCBI chr 8:45,116,763...45,193,320
Ensembl chr 8:45,118,814...45,193,181
|
|
G |
Lhx1 |
LIM homeobox 1 |
involved_in acts_upstream_of_or_within |
ISS ISO |
GO_REF:0000024 MGI:1347476 (PMID:10498685) |
UniProt RGD |
PMID:10498685 |
GO_REF:0000024 |
NCBI chr10:69,396,829...69,403,617
Ensembl chr10:69,396,829...69,403,617
|
|
G |
Lrp5 |
LDL receptor related protein 5 |
acts_upstream_of_or_within |
ISO |
MGI:1298218 (PMID:15142971) |
RGD |
PMID:15142971 |
|
NCBI chr 1:200,814,247...200,917,581
Ensembl chr 1:200,814,250...200,917,581
|
|
G |
Lrp6 |
LDL receptor related protein 6 |
acts_upstream_of_or_within |
ISO |
MGI:1278315|MGI:1861309|MGI:2156191 (PMID:15142971), (PMID:16126904), (PMID:19795512) |
RGD |
PMID:15142971 PMID:16126904 PMID:19795512 |
|
NCBI chr 4:167,269,856...167,400,364
Ensembl chr 4:167,270,353...167,400,497
|
|
G |
Mllt3 |
MLLT3, super elongation complex subunit |
acts_upstream_of_or_within |
ISO |
MGI:2388982 (PMID:12242306) |
RGD |
PMID:12242306 |
|
NCBI chr 5:102,259,075...102,515,447
Ensembl chr 5:102,260,011...102,515,361
|
|
G |
Msx1 |
msh homeobox 1 |
acts_upstream_of_or_within |
ISO |
MGI:97169 (PMID:21465616) |
RGD |
PMID:21465616 |
|
NCBI chr14:72,961,036...72,964,970
Ensembl chr14:72,961,148...72,964,966
|
|
G |
Msx2 |
msh homeobox 2 |
involved_in acts_upstream_of_or_within |
IEA ISO |
GO_REF:0000107 MGI:97168 (PMID:21465616) |
Ensembl RGD |
PMID:21465616 |
GO_REF:0000107 |
NCBI chr17:11,097,214...11,102,879
Ensembl chr17:11,097,103...11,102,879
|
|
G |
Neurod1 |
neuronal differentiation 1 |
acts_upstream_of_or_within |
ISO |
MGI:2148229 (PMID:16368089) |
RGD |
PMID:16368089 |
|
NCBI chr 3:64,359,554...64,363,526
Ensembl chr 3:64,359,395...64,363,649
|
|
G |
Nodal |
nodal growth differentiation factor |
acts_upstream_of_or_within |
ISO |
MGI:106676|MGI:2158732|MGI:2180793|MGI:2656539|MGI:3056345 (PMID:11311163), (PMID:11418863), (PMID:15004567), (PMID:15302604), (PMID:16496285) |
RGD |
PMID:11311163 PMID:11418863 PMID:15004567 PMID:15302604 PMID:16496285 |
|
NCBI chr20:29,368,436...29,376,837
Ensembl chr20:29,368,436...29,376,837
|
|
G |
Nr2f2 |
nuclear receptor subfamily 2, group F, member 2 |
acts_upstream_of_or_within |
ISO |
MGI:3579117|MGI:3579118 (PMID:15829524) |
RGD |
PMID:15829524 |
|
NCBI chr 1:124,008,282...124,022,521
Ensembl chr 1:124,009,181...124,022,031
|
|
G |
Otx1 |
orthodenticle homeobox 1 |
involved_in acts_upstream_of_or_within |
IEA ISO |
GO_REF:0000107 MGI:97451 (PMID:15105370) |
Ensembl RGD |
PMID:15105370 |
GO_REF:0000107 |
NCBI chr14:96,082,146...96,089,161
Ensembl chr14:96,082,151...96,089,086
|
|
G |
Otx2 |
orthodenticle homeobox 2 |
acts_upstream_of_or_within |
ISO |
MGI:109448|MGI:1857502|MGI:2661067 (PMID:11412024), (PMID:12652306), (PMID:9501024) |
RGD |
PMID:9501024 PMID:11412024 PMID:12652306 |
|
NCBI chr15:21,942,233...21,953,034
Ensembl chr15:21,943,191...21,953,416
|
|
G |
Pax6 |
paired box 6 |
acts_upstream_of_or_within |
ISO |
MGI:1856155|MGI:95388 (PMID:12196586), (PMID:15917450) |
RGD |
PMID:12196586 PMID:15917450 |
|
NCBI chr 3:92,128,772...92,157,022
Ensembl chr 3:92,135,637...92,157,014
|
|
G |
Pbx1 |
PBX homeobox 1 |
acts_upstream_of_or_within |
ISO |
MGI:2155612 (PMID:11566859) |
RGD |
PMID:11566859 |
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NCBI chr13:80,278,766...80,588,563
Ensembl chr13:80,278,770...80,588,594
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G |
Pcgf2 |
polycomb group ring finger 2 |
acts_upstream_of_or_within |
ISO |
MGI:1857633|MGI:1932339 (PMID:15741318), (PMID:8625838) |
RGD |
PMID:8625838 PMID:15741318 |
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NCBI chr10:82,682,563...82,694,563
Ensembl chr10:82,683,553...82,693,406
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|
G |
Pcsk5 |
proprotein convertase subtilisin/kexin type 5 |
involved_in |
ISO IEA |
(PMID:18519639) GO_REF:0000107 |
RGD Ensembl |
PMID:18519639 |
GO_REF:0000107 |
NCBI chr 1:214,837,847...215,267,626
Ensembl chr 1:214,837,927...215,267,600
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G |
Pds5a |
PDS5 cohesin associated factor A |
acts_upstream_of_or_within |
ISO |
MGI:3847257 (PMID:19412548) |
RGD |
PMID:19412548 |
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NCBI chr14:42,551,653...42,651,074
Ensembl chr14:42,552,647...42,648,669
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G |
Rarg |
retinoic acid receptor, gamma |
acts_upstream_of_or_within |
ISO |
MGI:1931079|MGI:88360 (PMID:11784046), (PMID:8388780) |
RGD |
PMID:8388780 PMID:11784046 |
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NCBI chr 7:133,367,833...133,390,301
Ensembl chr 7:133,367,833...133,390,177
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G |
Ring1 |
ring finger protein 1 |
involved_in acts_upstream_of_or_within |
IEA ISO |
GO_REF:0000107 MGI:1926913|MGI:99150 (PMID:11060235), (PMID:16624538) |
Ensembl RGD |
PMID:11060235 PMID:16624538 |
GO_REF:0000107 |
NCBI chr20:4,830,120...4,833,623
Ensembl chr20:4,830,053...4,833,620
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|
G |
Scmh1 |
Scm polycomb group protein homolog 1 |
acts_upstream_of_or_within |
ISO |
MGI:3706668 (PMID:17215307) |
RGD |
PMID:17215307 |
|
NCBI chr 5:133,991,167...134,115,893
Ensembl chr 5:133,990,520...134,122,105
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G |
Sf3b1 |
splicing factor 3b, subunit 1 |
acts_upstream_of_or_within |
ISO |
MGI:96995|MGI:99161 (PMID:15741318) |
RGD |
PMID:15741318 |
|
NCBI chr 9:56,492,403...56,532,300
Ensembl chr 9:56,492,403...56,532,300
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|
G |
Sfrp1 |
secreted frizzled-related protein 1 |
acts_upstream_of_or_within |
ISO |
MGI:108078 (PMID:16467359) |
RGD |
PMID:16467359 |
|
NCBI chr16:68,575,763...68,614,180
Ensembl chr16:68,575,763...68,614,286
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G |
Sfrp2 |
secreted frizzled-related protein 2 |
acts_upstream_of_or_within |
ISO |
MGI:892014 (PMID:16467359) |
RGD |
PMID:16467359 |
|
NCBI chr 2:169,089,517...169,097,064
Ensembl chr 2:169,089,517...169,097,063
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G |
Shh |
sonic hedgehog signaling molecule |
acts_upstream_of_or_within |
ISO |
MGI:1857796 (PMID:11118883) |
RGD |
PMID:11118883 |
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NCBI chr 4:6,954,017...6,963,170
Ensembl chr 4:6,954,017...6,963,170
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|
G |
Smad2 |
SMAD family member 2 |
involved_in acts_upstream_of_or_within |
ISS ISO |
GO_REF:0000024 MGI:1857691|MGI:2668416 (PMID:11418863), (PMID:12842913), (PMID:9529255) |
UniProt RGD |
PMID:9529255 PMID:11418863 PMID:12842913 |
GO_REF:0000024 |
NCBI chr18:69,849,884...69,918,926
Ensembl chr18:69,850,377...69,912,323
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G |
Smad4 |
SMAD family member 4 |
acts_upstream_of_or_within |
ISO |
MGI:1857691|MGI:2656539|MGI:2668393 (PMID:15215210) |
RGD |
PMID:15215210 |
|
NCBI chr18:67,243,742...67,274,438
Ensembl chr18:67,243,742...67,274,438
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|
G |
Smo |
smoothened, frizzled class receptor |
involved_in acts_upstream_of_or_within |
IEA ISO |
GO_REF:0000107 MGI:2176256|MGI:2450929 (PMID:22987639) |
Ensembl RGD |
PMID:22987639 |
GO_REF:0000107 |
NCBI chr 4:58,343,626...58,373,823
Ensembl chr 4:58,343,529...58,373,829
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|
G |
Tbx1 |
T-box transcription factor 1 |
involved_in acts_upstream_of_or_within |
ISS ISO |
GO_REF:0000024 MGI:104686|MGI:2179191 (PMID:15084464), (PMID:16399080) |
UniProt RGD |
PMID:15084464 PMID:16399080 |
GO_REF:0000024 |
NCBI chr11:82,409,275...82,419,058
Ensembl chr11:82,409,275...82,418,380
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|
G |
Tbxt |
T-box transcription factor T |
acts_upstream_of_or_within |
ISO |
MGI:3042261|MGI:3042262|MGI:3042264 (PMID:15384171) |
RGD |
PMID:15384171 |
|
NCBI chr 1:52,298,104...52,309,813
Ensembl chr 1:52,298,099...52,305,864
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|
G |
Tcf15 |
transcription factor 15 |
acts_upstream_of_or_within |
ISO |
MGI:1929775 (PMID:8955271) |
RGD |
PMID:8955271 |
|
NCBI chr 3:140,638,984...140,644,766
Ensembl chr 3:140,638,984...140,644,766
|
|
G |
Tgfbr1 |
transforming growth factor, beta receptor 1 |
involved_in acts_upstream_of_or_within |
IEA ISO |
GO_REF:0000107 MGI:87912 (PMID:16845371) |
Ensembl RGD |
PMID:16845371 |
GO_REF:0000107 |
NCBI chr 5:61,653,773...61,710,777
Ensembl chr 5:61,653,233...61,710,777
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|
G |
Tshz1 |
teashirt zinc finger homeobox 1 |
acts_upstream_of_or_within |
ISO |
MGI:3721421 (PMID:17586487) |
RGD |
PMID:17586487 |
|
NCBI chr18:77,376,399...77,452,815
Ensembl chr18:77,377,394...77,453,509
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|
G |
Tulp3 |
TUB like protein 3 |
acts_upstream_of_or_within |
ISO |
MGI:2388066 (PMID:19334287) |
RGD |
PMID:19334287 |
|
NCBI chr 4:161,590,478...161,632,244
Ensembl chr 4:161,590,479...161,632,149
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|
G |
Vangl2 |
VANGL planar cell polarity protein 2 |
acts_upstream_of_or_within |
ISO |
MGI:1857642 (PMID:18849982) |
RGD |
PMID:18849982 |
|
NCBI chr13:84,462,731...84,489,404
Ensembl chr13:84,465,527...84,489,378
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|
G |
Wnt3 |
Wnt family member 3 |
acts_upstream_of_or_within |
ISO |
MGI:2178826 (PMID:10431240) |
RGD |
PMID:10431240 |
|
NCBI chr10:88,680,198...88,724,170
Ensembl chr10:88,680,248...88,724,099
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|
G |
Wnt3a |
Wnt family member 3A |
acts_upstream_of_or_within |
ISO |
(PMID:15148409) |
RGD |
PMID:15148409 |
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NCBI chr10:44,034,174...44,078,366
Ensembl chr10:44,034,194...44,078,324
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G |
Wnt5a |
Wnt family member 5A |
acts_upstream_of_or_within |
ISO |
MGI:1857617 (PMID:15073149), (PMID:19795512) |
RGD |
PMID:15073149 PMID:19795512 |
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NCBI chr16:3,697,032...3,718,230
Ensembl chr16:3,697,032...3,718,234
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|
G |
Yy1 |
YY1 transcription factor |
acts_upstream_of_or_within |
ISO |
MGI:1101770|MGI:2445451 (PMID:16624538) |
RGD |
PMID:16624538 |
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NCBI chr 6:127,706,739...127,736,499
Ensembl chr 6:127,707,596...127,732,747
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|
G |
Zbtb16 |
zinc finger and BTB domain containing 16 |
acts_upstream_of_or_within |
ISO |
MGI:2182708 (PMID:10835630) |
RGD |
PMID:10835630 |
|
NCBI chr 8:48,989,376...49,177,011
Ensembl chr 8:48,994,566...49,177,011
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|
G |
Zic3 |
Zic family member 3 |
acts_upstream_of_or_within |
ISO |
MGI:97359 (PMID:16496285) |
RGD |
PMID:16496285 |
|
NCBI chr X:136,123,662...136,129,627
Ensembl chr X:136,124,026...136,134,746
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|
|
G |
Lrp6 |
LDL receptor related protein 6 |
acts_upstream_of_or_within |
ISO |
MGI:98956 (PMID:11029008) |
RGD |
PMID:11029008 |
|
NCBI chr 4:167,269,856...167,400,364
Ensembl chr 4:167,270,353...167,400,497
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G |
Med12 |
mediator complex subunit 12 |
acts_upstream_of_or_within |
ISO |
MGI:4839484 (PMID:20630950) |
RGD |
PMID:20630950 |
|
NCBI chr X:66,404,807...66,427,775
Ensembl chr X:66,404,760...66,428,387
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|
G |
Wnt3a |
Wnt family member 3A |
acts_upstream_of_or_within |
ISO |
MGI:1298218 (PMID:11029008) |
RGD |
PMID:11029008 |
|
NCBI chr10:44,034,174...44,078,366
Ensembl chr10:44,034,194...44,078,324
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G |
Egr2 |
early growth response 2 |
acts_upstream_of_or_within |
ISO |
MGI:1857507 (PMID:7903221) |
RGD |
PMID:7903221 |
|
NCBI chr20:21,051,270...21,056,322
Ensembl chr20:21,051,277...21,055,562
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|
G |
Hoxa2 |
homeobox A2 |
involved_in acts_upstream_of_or_within |
IEA ISO |
GO_REF:0000107 MGI:1857626 (PMID:9367425) |
Ensembl RGD |
PMID:9367425 |
GO_REF:0000107 |
NCBI chr 4:81,262,668...81,266,970
Ensembl chr 4:81,262,768...81,265,044
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|
G |
Mafb |
MAF bZIP transcription factor B |
acts_upstream_of_or_within |
ISO |
MGI:1856419 (PMID:7925021) |
RGD |
PMID:7925021 |
|
NCBI chr 3:148,998,111...149,000,031
Ensembl chr 3:148,998,122...149,000,031
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|
|
G |
Zic2 |
Zic family member 2 |
involved_in |
ISO |
MGI:106676 (PMID:17490632) |
RGD |
PMID:17490632 |
|
NCBI chr15:99,576,697...99,581,522
Ensembl chr15:99,576,697...99,581,522
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|
G |
Zic3 |
Zic family member 3 |
involved_in |
ISO |
MGI:106679 (PMID:17490632) |
RGD |
PMID:17490632 |
|
NCBI chr X:136,123,662...136,129,627
Ensembl chr X:136,124,026...136,134,746
|
|
|
G |
Adgrg1 |
adhesion G protein-coupled receptor G1 |
involved_in acts_upstream_of_or_within |
IEA ISO |
GO_REF:0000107 (PMID:24531968) |
Ensembl RGD |
PMID:24531968 |
GO_REF:0000107 |
NCBI chr19:10,003,963...10,041,122
Ensembl chr19:10,003,975...10,041,108
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|
G |
Bhlhe22 |
basic helix-loop-helix family, member e22 |
acts_upstream_of_or_within |
ISO |
MGI:3707409 (PMID:23431145) |
RGD |
PMID:23431145 |
|
NCBI chr 2:100,486,400...100,489,510
Ensembl chr 2:100,486,400...100,489,510
|
|
G |
Dmrta2 |
DMRT-like family A2 |
acts_upstream_of_or_within |
ISO |
MGI:5527461 (PMID:22923088), (PMID:23056351) |
RGD |
PMID:22923088 PMID:23056351 |
|
NCBI chr 5:124,805,883...124,811,694
Ensembl chr 5:124,805,883...124,811,630
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|
G |
Emx1 |
empty spiracles homeobox 1 |
acts_upstream_of_or_within |
ISO |
MGI:95388 (PMID:15147765) |
RGD |
PMID:15147765 |
|
NCBI chr 4:117,725,148...117,741,616
Ensembl chr 4:117,725,155...117,741,613
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|
G |
Emx2 |
empty spiracles homeobox 2 |
acts_upstream_of_or_within |
ISO |
MGI:2148858|MGI:95387 (PMID:12764040), (PMID:15147765) |
RGD |
PMID:12764040 PMID:15147765 |
|
NCBI chr 1:258,626,584...258,633,594
Ensembl chr 1:258,626,584...258,633,594
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|
G |
Eomes |
eomesodermin |
involved_in acts_upstream_of_or_within |
ISO |
(PMID:30186101) MGI:2176173|MGI:3802572 (PMID:23431145) |
RGD |
PMID:23431145 PMID:30186101 |
|
NCBI chr 8:118,181,340...118,189,186
Ensembl chr 8:118,181,777...118,188,316
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|
G |
Nr2f1 |
nuclear receptor subfamily 2, group F, member 1 |
acts_upstream_of_or_within |
ISO |
MGI:3521756 (PMID:17828260) |
RGD |
PMID:17828260 |
|
NCBI chr 2:8,040,375...8,050,123
Ensembl chr 2:8,040,377...8,050,123
|
|
G |
Pax6 |
paired box 6 |
involved_in acts_upstream_of_or_within |
IEA ISO |
GO_REF:0000107 (PMID:30186101) MGI:1856155 (PMID:12764040), (PMID:23431145) |
Ensembl RGD |
PMID:12764040 PMID:23431145 PMID:30186101 |
GO_REF:0000107 |
NCBI chr 3:92,128,772...92,157,022
Ensembl chr 3:92,135,637...92,157,014
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G |
Tra2b |
transformer 2 beta |
involved_in acts_upstream_of_or_within |
IEA ISO |
GO_REF:0000107 MGI:2176173|MGI:4450919 (PMID:24586484) |
Ensembl RGD |
PMID:24586484 |
GO_REF:0000107 |
NCBI chr11:78,788,880...78,807,252
Ensembl chr11:78,788,884...78,807,249
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G |
Dll1 |
delta like canonical Notch ligand 1 |
involved_in acts_upstream_of_or_within |
IEA ISO |
GO_REF:0000107 MGI:1861919 (PMID:12001066) |
Ensembl RGD |
PMID:12001066 |
GO_REF:0000107 |
NCBI chr 1:56,312,062...56,320,177
Ensembl chr 1:56,312,066...56,320,179
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G |
Dll3 |
delta like canonical Notch ligand 3 |
involved_in acts_upstream_of_or_within |
IEA ISO |
GO_REF:0000107 MGI:1857008 (PMID:12001066) |
Ensembl RGD |
PMID:12001066 |
GO_REF:0000107 |
NCBI chr 1:83,562,011...83,570,008
Ensembl chr 1:83,562,014...83,569,750
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G |
Lfng |
LFNG O-fucosylpeptide 3-beta-N-acetylglucosaminyltransferase |
involved_in acts_upstream_of_or_within |
IEA ISO |
GO_REF:0000107 MGI:1933734 (PMID:12001066) |
Ensembl RGD |
PMID:12001066 |
GO_REF:0000107 |
NCBI chr12:14,030,551...14,038,996
Ensembl chr12:14,018,333...14,039,008
|
|
G |
Notch1 |
notch receptor 1 |
acts_upstream_of_or_within |
ISO |
MGI:1857877 (PMID:12001066) |
RGD |
PMID:12001066 |
|
NCBI chr 3:9,277,955...9,323,531
Ensembl chr 3:9,278,086...9,323,531
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|
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G |
Sfrp1 |
secreted frizzled-related protein 1 |
involved_in acts_upstream_of_or_within |
IEA ISO |
GO_REF:0000107 MGI:108078|MGI:1860298 (PMID:18257070) |
Ensembl RGD |
PMID:18257070 |
GO_REF:0000107 |
NCBI chr16:68,575,763...68,614,180
Ensembl chr16:68,575,763...68,614,286
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G |
Pkd1l1 |
polycystin 1 like 1, transient receptor potential channel interacting |
involved_in |
ISO |
(PMID:21307093) |
RGD |
PMID:21307093 |
|
NCBI chr14:83,552,964...83,670,062
Ensembl chr14:83,545,469...83,638,498
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G |
Pkd2 |
polycystin 2, transient receptor potential cation channel |
involved_in |
ISO |
(PMID:21307093) |
RGD |
PMID:21307093 |
|
NCBI chr14:5,237,135...5,280,455
Ensembl chr14:5,237,135...5,280,825
|
|
G |
Tmem107 |
transmembrane protein 107 |
acts_upstream_of_or_within |
ISO |
MGI:5007367 (PMID:31887266) |
RGD |
PMID:31887266 |
|
NCBI chr10:53,772,153...53,774,685
Ensembl chr10:53,771,784...53,774,676
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|
|
G |
Ccdc39 |
coiled-coil domain 39 molecular ruler complex subunit |
involved_in |
ISO |
(PMID:22693285) |
RGD |
PMID:22693285 |
|
NCBI chr 2:116,665,651...116,703,354
Ensembl chr 2:116,665,261...116,703,350
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|
G |
Ccdc40 |
coiled-coil domain 40 molecular ruler complex subunit |
involved_in |
ISO |
(PMID:22693285) |
RGD |
PMID:22693285 |
|
NCBI chr10:104,486,748...104,527,284
Ensembl chr10:104,486,748...104,527,243
|
|
G |
Dnaaf1 |
dynein, axonemal, assembly factor 1 |
involved_in |
ISO IEA |
(PMID:19944405) GO_REF:0000107 |
RGD Ensembl |
PMID:19944405 |
GO_REF:0000107 |
NCBI chr19:47,624,534...47,652,314
Ensembl chr19:47,624,181...47,652,313
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|
G |
Dnaaf19 |
dynein axonemal assembly factor 19 |
involved_in |
ISO |
(PMID:22581229) |
RGD |
PMID:22581229 |
|
NCBI chr10:87,846,327...87,849,959
Ensembl chr10:87,846,357...87,849,757
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|
G |
Megf8 |
multiple EGF-like-domains 8 |
involved_in acts_upstream_of_or_within |
IEA ISO ISS |
GO_REF:0000107 MGI:3722325 (PMID:18043505) GO_REF:0000024 |
Ensembl RGD UniProt |
PMID:18043505 |
GO_REF:0000024 GO_REF:0000107 |
NCBI chr 1:80,902,236...80,951,614
Ensembl chr 1:80,902,574...80,951,613
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|
G |
Zic3 |
Zic family member 3 |
involved_in |
ISO |
(PMID:9354794) |
RGD |
PMID:9354794 |
|
NCBI chr X:136,123,662...136,129,627
Ensembl chr X:136,124,026...136,134,746
|
|
|
G |
Cer1 |
cerberus 1, DAN family BMP antagonist |
involved_in |
ISO |
(PMID:9660951) |
RGD |
PMID:9660951 |
|
NCBI chr 5:97,306,427...97,309,783
Ensembl chr 5:97,306,431...97,309,783
|
|
G |
Grem1 |
gremlin 1, DAN family BMP antagonist |
involved_in |
ISO |
(PMID:9660951) |
RGD |
PMID:9660951 |
|
NCBI chr 3:100,512,317...100,524,001
Ensembl chr 3:100,512,313...100,524,082
|
|
G |
Grem2 |
gremlin 2, DAN family BMP antagonist |
involved_in |
ISO |
(PMID:23063586) |
RGD |
PMID:23063586 |
|
NCBI chr13:86,778,543...86,871,509
Ensembl chr13:86,778,500...86,871,615
|
|
G |
Nbl1 |
NBL1, DAN family BMP antagonist |
involved_in |
ISO |
(PMID:9660951) |
RGD |
PMID:9660951 |
|
NCBI chr 5:151,318,752...151,329,948
Ensembl chr 5:151,318,754...151,338,719
|
|
|
G |
Cited2 |
Cbp/p300-interacting transactivator, with Glu/Asp-rich carboxy-terminal domain, 2 |
acts_upstream_of_or_within |
ISO |
MGI:2176158 (PMID:15750185) |
RGD |
PMID:15750185 |
|
NCBI chr 1:12,312,426...12,314,869
Ensembl chr 1:12,312,160...12,314,897
|
|
G |
Dand5 |
DAN domain BMP antagonist family member 5 |
involved_in |
ISO IBA |
(PMID:15466485) GO_REF:0000033 |
RGD GO_Central |
PMID:15466485 |
GO_REF:0000033 |
NCBI chr19:23,330,917...23,340,486
Ensembl chr19:23,334,164...23,339,589
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|
G |
Hand1 |
heart and neural crest derivatives expressed 1 |
acts_upstream_of_or_within |
ISO |
(PMID:11076684) |
RGD |
PMID:11076684 |
|
NCBI chr10:42,006,646...42,009,213
Ensembl chr10:42,006,651...42,009,213
|
|
G |
Hand2 |
heart and neural crest derivatives expressed 2 |
acts_upstream_of_or_within |
ISO |
MGI:1857639 (PMID:9576835) |
RGD |
PMID:9576835 |
|
NCBI chr16:32,917,448...32,920,791
Ensembl chr16:32,917,823...32,919,891
|
|
G |
Megf8 |
multiple EGF-like-domains 8 |
involved_in acts_upstream_of_or_within |
IEA ISO ISS |
GO_REF:0000107 MGI:3722325 (PMID:18043505) GO_REF:0000024 (PMID:23063620) |
Ensembl RGD UniProt |
PMID:18043505 PMID:23063620 |
GO_REF:0000024 GO_REF:0000107 |
NCBI chr 1:80,902,236...80,951,614
Ensembl chr 1:80,902,574...80,951,613
|
|
G |
Mmp21 |
matrix metallopeptidase 21 |
involved_in |
ISO |
(PMID:26437028) |
RGD |
PMID:26437028 |
|
NCBI chr 1:188,480,186...188,485,855
Ensembl chr 1:188,480,186...188,485,855
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|
G |
Odad3 |
outer dynein arm docking complex subunit 3 |
acts_upstream_of_or_within |
ISO |
MGI:5445347 (PMID:25192045) |
RGD |
PMID:25192045 |
|
NCBI chr 8:20,520,898...20,534,499
Ensembl chr 8:20,520,898...20,534,499
|
|
G |
Tbxt |
T-box transcription factor T |
acts_upstream_of_or_within |
ISO |
MGI:1856184 (PMID:10349618) |
RGD |
PMID:10349618 |
|
NCBI chr 1:52,298,104...52,309,813
Ensembl chr 1:52,298,099...52,305,864
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|
|
G |
Nphp3 |
nephrocystin 3 |
involved_in |
ISO |
(PMID:20007846) |
RGD |
PMID:20007846 |
|
NCBI chr 8:104,621,908...104,662,383
Ensembl chr 8:104,621,864...104,662,383
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|
|
G |
Cited2 |
Cbp/p300-interacting transactivator, with Glu/Asp-rich carboxy-terminal domain, 2 |
involved_in |
ISO |
(PMID:15475956) |
RGD |
PMID:15475956 |
|
NCBI chr 1:12,312,426...12,314,869
Ensembl chr 1:12,312,160...12,314,897
|
|
G |
Dand5 |
DAN domain BMP antagonist family member 5 |
involved_in |
ISO |
(PMID:15466485) |
RGD |
PMID:15466485 |
|
NCBI chr19:23,330,917...23,340,486
Ensembl chr19:23,334,164...23,339,589
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|
G |
Nodal |
nodal growth differentiation factor |
involved_in |
ISO |
(PMID:17507406) |
RGD |
PMID:17507406 |
|
NCBI chr20:29,368,436...29,376,837
Ensembl chr20:29,368,436...29,376,837
|
|
G |
Shh |
sonic hedgehog signaling molecule |
involved_in |
IEA ISO |
GO_REF:0000107 (PMID:11517919) |
Ensembl RGD |
PMID:11517919 |
GO_REF:0000107 |
NCBI chr 4:6,954,017...6,963,170
Ensembl chr 4:6,954,017...6,963,170
|
|
G |
Smad2 |
SMAD family member 2 |
involved_in |
ISO |
(PMID:17239842) |
RGD |
PMID:17239842 |
|
NCBI chr18:69,849,884...69,918,926
Ensembl chr18:69,850,377...69,912,323
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|
G |
Smo |
smoothened, frizzled class receptor |
involved_in |
IEA ISO ISS |
GO_REF:0000107 (PMID:11517919) GO_REF:0000024 |
Ensembl RGD UniProt |
PMID:11517919 |
GO_REF:0000024 GO_REF:0000107 |
NCBI chr 4:58,343,626...58,373,823
Ensembl chr 4:58,343,529...58,373,829
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|
|
G |
Dnah11 |
dynein, axonemal, heavy chain 11 |
acts_upstream_of_or_within |
ISO |
MGI:1856917 (PMID:18414654) |
RGD |
PMID:18414654 |
|
NCBI chr 6:138,839,175...139,155,554
Ensembl chr 6:138,839,177...139,155,536
|
|
G |
Zic3 |
Zic family member 3 |
involved_in |
ISO |
(PMID:11959836) |
RGD |
PMID:11959836 |
|
NCBI chr X:136,123,662...136,129,627
Ensembl chr X:136,124,026...136,134,746
|
|
|
G |
Acvr1 |
activin A receptor type 1 |
acts_upstream_of_or_within |
ISO |
MGI:1931734 (PMID:15531373) |
RGD |
PMID:15531373 |
|
NCBI chr 3:42,978,558...43,097,892
Ensembl chr 3:42,978,561...43,098,241
|
|
G |
Acvr1c |
activin A receptor type 1C |
NOT|acts_upstream_of_or_within |
ISO |
MGI:3512292 (PMID:15485907) |
RGD |
PMID:15485907 |
|
NCBI chr 3:42,815,490...42,892,423
Ensembl chr 3:42,822,610...42,892,327
|
|
G |
Acvr2a |
activin A receptor type 2A |
involved_in acts_upstream_of_or_within |
IEA ISO |
GO_REF:0000107 MGI:87912 (PMID:16991118) |
Ensembl RGD |
PMID:16991118 |
GO_REF:0000107 |
NCBI chr 3:33,204,961...33,292,673
Ensembl chr 3:33,205,523...33,289,968
|
|
G |
Acvr2b |
activin A receptor type 2B |
involved_in acts_upstream_of_or_within |
IEA ISO |
GO_REF:0000107 MGI:102806|MGI:1857709 (PMID:16991118), (PMID:9242489) |
Ensembl RGD |
PMID:9242489 PMID:16991118 |
GO_REF:0000107 |
NCBI chr 8:119,138,901...119,178,477
Ensembl chr 8:119,138,812...119,170,458
|
|
G |
Alg5 |
ALG5, dolichyl-phosphate beta-glucosyltransferase |
acts_upstream_of_or_within |
ISO |
MGI:3578146 (PMID:15755804) |
RGD |
PMID:15755804 |
|
NCBI chr 2:138,936,998...138,951,228
Ensembl chr 2:138,936,993...138,951,216
|
|
G |
Anks6 |
ankyrin repeat and sterile alpha motif domain containing 6 |
involved_in acts_upstream_of_or_within |
IEA ISO |
GO_REF:0000107 (PMID:25807483) |
Ensembl RGD |
PMID:25807483 |
GO_REF:0000107 |
NCBI chr 5:61,309,183...61,350,596
Ensembl chr 5:61,309,183...61,350,596
|
|
G |
Ap1b1 |
adaptor related protein complex 1 subunit beta 1 |
involved_in acts_upstream_of_or_within |
IEA ISO |
GO_REF:0000107 (PMID:25807483) |
Ensembl RGD |
PMID:25807483 |
GO_REF:0000107 |
NCBI chr14:79,879,482...79,930,778
Ensembl chr14:79,879,533...79,930,778
|
|
G |
Arl13b |
ARF like GTPase 13B |
acts_upstream_of_or_within |
ISO |
MGI:3578151 (PMID:15755804) |
RGD |
PMID:15755804 |
|
NCBI chr11:150,100...217,103
Ensembl chr11:150,955...217,197
|
|
G |
Bicc1 |
BicC family RNA binding protein 1 |
acts_upstream_of_or_within |
ISO |
(PMID:25807483) |
RGD |
PMID:25807483 |
|
NCBI chr20:17,449,639...17,686,775
Ensembl chr20:17,449,560...17,686,776
|
|
G |
Cc2d2a |
coiled-coil and C2 domain containing 2A |
acts_upstream_of_or_within |
ISO |
MGI:5708063 (PMID:24947469), (PMID:25807483) |
RGD |
PMID:24947469 PMID:25807483 |
|
NCBI chr14:67,349,004...67,435,883
Ensembl chr14:67,351,353...67,435,949
|
|
G |
Ccdc39 |
coiled-coil domain 39 molecular ruler complex subunit |
acts_upstream_of_or_within |
ISO |
MGI:5316786 (PMID:25807483), (PMID:28289722) |
RGD |
PMID:25807483 PMID:28289722 |
|
NCBI chr 2:116,665,651...116,703,354
Ensembl chr 2:116,665,261...116,703,350
|
|
G |
Ccdc40 |
coiled-coil domain 40 molecular ruler complex subunit |
acts_upstream_of_or_within |
ISO |
MGI:97359 (PMID:28182636) |
RGD |
PMID:28182636 |
|
NCBI chr10:104,486,748...104,527,284
Ensembl chr10:104,486,748...104,527,243
|
|
G |
Cep290 |
centrosomal protein 290 |
acts_upstream_of_or_within |
ISO |
(PMID:25807483) |
RGD |
PMID:25807483 |
|
NCBI chr 7:35,310,071...35,399,388
Ensembl chr 7:35,310,199...35,399,392
|
|
G |
Cfap53 |
cilia and flagella associated protein 53 |
involved_in |
ISO |
(PMID:26531781) |
RGD |
PMID:26531781 |
|
NCBI chr18:67,884,651...67,955,873
Ensembl chr18:67,869,855...67,952,318
|
|
G |
Cfc1 |
cripto, FRL-1, cryptic family 1 |
involved_in acts_upstream_of_or_within |
IBA ISO |
GO_REF:0000033 MGI:2179530 (PMID:10521397), (PMID:25807483) |
GO_Central RGD |
PMID:10521397 PMID:25807483 |
GO_REF:0000033 |
NCBI chr 9:36,742,106...36,751,931
Ensembl chr 9:36,739,071...36,751,930
|
|
G |
Ciroz |
ciliated left-right organizer protein containing ZP-N domains |
acts_upstream_of_or_within |
ISO |
(PMID:25807483) |
RGD |
PMID:25807483 |
|
NCBI chr 5:159,075,217...159,110,642
Ensembl chr 5:159,075,343...159,105,369
|
|
G |
Cited2 |
Cbp/p300-interacting transactivator, with Glu/Asp-rich carboxy-terminal domain, 2 |
involved_in |
ISS ISO |
GO_REF:0000024 (PMID:15750185) |
UniProt RGD |
PMID:15750185 |
GO_REF:0000024 |
NCBI chr 1:12,312,426...12,314,869
Ensembl chr 1:12,312,160...12,314,897
|
|
G |
Cripto |
cripto, EGF-CFC family member |
involved_in |
IBA |
GO_REF:0000033 |
GO_Central |
|
GO_REF:0000033 |
NCBI chr 8:110,924,774...110,938,545
Ensembl chr 8:110,925,024...110,930,308
|
|
G |
Daam2 |
dishevelled associated activator of morphogenesis 2 |
acts_upstream_of_or_within |
ISO |
MGI:4841108 (PMID:24091014) |
RGD |
PMID:24091014 |
|
NCBI chr 9:11,428,913...11,546,982
Ensembl chr 9:11,428,724...11,545,497
|
|
G |
Dand5 |
DAN domain BMP antagonist family member 5 |
acts_upstream_of_or_within |
ISO |
MGI:3056132|MGI:97359 (PMID:15466485) |
RGD |
PMID:15466485 |
|
NCBI chr19:23,330,917...23,340,486
Ensembl chr19:23,334,164...23,339,589
|
|
G |
Daw1 |
dynein assembly factor with WD repeats 1 |
involved_in acts_upstream_of_or_within |
IEA ISO |
GO_REF:0000107 MGI:5431501 (PMID:25807483), (PMID:28289722) |
Ensembl RGD |
PMID:25807483 PMID:28289722 |
GO_REF:0000107 |
NCBI chr 9:84,435,552...84,472,632
Ensembl chr 9:84,435,552...84,472,635
|
|
G |
Disp1 |
dispatched RND transporter family member 1 |
acts_upstream_of_or_within |
ISO |
MGI:2429759|MGI:2448055 (PMID:12421714), (PMID:15755804) |
RGD |
PMID:12421714 PMID:15755804 |
|
NCBI chr13:94,720,928...94,866,695
Ensembl chr13:94,720,928...94,866,702
|
|
G |
Dll1 |
delta like canonical Notch ligand 1 |
acts_upstream_of_or_within |
ISO |
MGI:1861919 (PMID:12730124) |
RGD |
PMID:12730124 |
|
NCBI chr 1:56,312,062...56,320,177
Ensembl chr 1:56,312,066...56,320,179
|
|
G |
Dnaaf19 |
dynein axonemal assembly factor 19 |
involved_in |
IBA |
GO_REF:0000033 |
GO_Central |
|
GO_REF:0000033 |
NCBI chr10:87,846,327...87,849,959
Ensembl chr10:87,846,357...87,849,757
|
|
G |
Dnaaf3 |
dynein, axonemal, assembly factor 3 |
acts_upstream_of_or_within |
ISO |
(PMID:25807483) |
RGD |
PMID:25807483 |
|
NCBI chr 1:69,291,300...69,299,365
Ensembl chr 1:69,291,454...69,299,344
|
|
G |
Dnaaf4 |
dynein axonemal assembly factor 4 |
involved_in acts_upstream_of_or_within |
ISS ISO IBA |
GO_REF:0000024 (PMID:23872636) (PMID:25807483) GO_REF:0000033 |
UniProt RGD GO_Central |
PMID:23872636 PMID:25807483 |
GO_REF:0000024 GO_REF:0000033 |
NCBI chr 8:73,696,394...73,711,315
Ensembl chr 8:73,698,103...73,711,292
|
|
G |
Dnah11 |
dynein, axonemal, heavy chain 11 |
acts_upstream_of_or_within |
ISO |
(PMID:12142464), (PMID:18022865), (PMID:22184204), (PMID:22499950) MGI:1856917|MGI:2152963|MGI:4821828 (PMID:10556073), (PMID:25807483), (PMID:27340223), (PMID:9353118) |
RGD |
PMID:9353118 PMID:10556073 PMID:12142464 PMID:18022865 PMID:22184204 PMID:22499950 PMID:25807483 PMID:27340223 More...
|
MGI:48750 |
NCBI chr 6:138,839,175...139,155,554
Ensembl chr 6:138,839,177...139,155,536
|
|
G |
Dnah5 |
dynein, axonemal, heavy chain 5 |
involved_in acts_upstream_of_or_within |
IEA ISO |
GO_REF:0000107 MGI:2180081|MGI:5285078 (PMID:11912187), (PMID:25807483), (PMID:28289722) (PMID:11788826), (PMID:17515466), (PMID:22499950) |
Ensembl RGD |
PMID:11788826 PMID:11912187 PMID:17515466 PMID:22499950 PMID:25807483 PMID:28289722 More...
|
GO_REF:0000107 |
NCBI chr 2:78,937,788...79,255,551
Ensembl chr 2:78,937,800...79,254,890
|
|
G |
Dnai1 |
dynein, axonemal, intermediate chain 1 |
acts_upstream_of_or_within |
ISO |
(PMID:11231901), (PMID:17515466), (PMID:22499950) (PMID:25807483) |
RGD |
PMID:11231901 PMID:17515466 PMID:22499950 PMID:25807483 |
|
NCBI chr 5:56,730,179...56,800,926
Ensembl chr 5:56,730,179...56,800,925
|
|
G |
Dnai2 |
dynein, axonemal, intermediate chain 2 |
acts_upstream_of_or_within |
ISO |
(PMID:18950741) |
RGD |
PMID:18950741 |
|
NCBI chr10:99,759,966...99,793,379
Ensembl chr10:99,759,966...99,793,378
|
|
G |
Dpcd |
deleted in primary ciliary dyskinesia |
involved_in acts_upstream_of_or_within |
IEA ISO |
GO_REF:0000107 MGI:4262238 (PMID:21746835) |
Ensembl RGD |
PMID:21746835 |
GO_REF:0000107 |
NCBI chr 1:244,408,766...244,426,891
Ensembl chr 1:244,408,785...244,426,888
|
|
G |
Drc1 |
dynein regulatory complex subunit 1 |
acts_upstream_of_or_within |
ISO |
(PMID:25807483) |
RGD |
PMID:25807483 |
|
NCBI chr 6:26,025,004...26,059,438
Ensembl chr 6:26,025,005...26,059,414
|
|
G |
Dync2h1 |
dynein cytoplasmic 2 heavy chain 1 |
involved_in acts_upstream_of_or_within |
IEA ISO |
GO_REF:0000107 MGI:3578144 (PMID:15755804), (PMID:16061793), (PMID:16229832), (PMID:25807483) |
Ensembl RGD |
PMID:15755804 PMID:16061793 PMID:16229832 PMID:25807483 |
GO_REF:0000107 |
NCBI chr 8:4,189,067...4,412,183
Ensembl chr 8:4,189,257...4,412,183
|
|
G |
Dync2li1 |
dynein cytoplasmic 2 light intermediate chain 1 |
involved_in acts_upstream_of_or_within |
IEA ISO |
GO_REF:0000107 MGI:3505858 (PMID:15371312) |
Ensembl RGD |
PMID:15371312 |
GO_REF:0000107 |
NCBI chr 6:9,992,537...10,025,355
Ensembl chr 6:9,992,541...10,025,336
|
|
G |
Fgf10 |
fibroblast growth factor 10 |
acts_upstream_of_or_within |
ISO |
MGI:1859647 (PMID:15329346) |
RGD |
PMID:15329346 |
|
NCBI chr 2:50,801,171...50,878,218
Ensembl chr 2:50,800,992...50,876,866
|
|
G |
Fgf8 |
fibroblast growth factor 8 |
acts_upstream_of_or_within |
ISO |
MGI:1857843 (PMID:10411502) |
RGD |
PMID:10411502 |
|
NCBI chr 1:244,584,477...244,590,578
Ensembl chr 1:244,584,652...244,590,359
|
|
G |
Foxf1 |
forkhead box F1 |
acts_upstream_of_or_within |
ISO |
(PMID:11493558) |
RGD |
PMID:11493558 |
|
NCBI chr19:49,153,949...49,157,741
Ensembl chr19:49,153,699...49,157,738
|
|
G |
Foxh1 |
forkhead box H1 |
acts_upstream_of_or_within |
ISO |
MGI:2387775 (PMID:12642485) |
RGD |
PMID:12642485 |
|
NCBI chr 7:108,387,969...108,391,566
Ensembl chr 7:108,387,969...108,390,049
|
|
G |
Foxj1 |
forkhead box J1 |
involved_in acts_upstream_of_or_within |
ISS ISO IEA |
GO_REF:0000024 (PMID:25807483) GO_REF:0000107 (PMID:31630787) |
UniProt RGD Ensembl |
PMID:25807483 PMID:31630787 |
GO_REF:0000024 GO_REF:0000107 |
NCBI chr10:101,566,299...101,570,370
Ensembl chr10:101,566,304...101,570,237
|
|
G |
Galnt11 |
polypeptide N-acetylgalactosaminyltransferase 11 |
involved_in |
ISS |
GO_REF:0000024 |
UniProt |
|
GO_REF:0000024 |
NCBI chr 4:9,837,629...9,871,141
Ensembl chr 4:9,837,629...9,871,140
|
|
G |
Gas8 |
growth arrest specific 8 |
acts_upstream_of_or_within |
ISO |
MGI:3870680 (PMID:27472056) |
RGD |
PMID:27472056 |
|
NCBI chr19:51,552,770...51,572,323
Ensembl chr19:51,552,816...51,572,305
|
|
G |
Ift140 |
intraflagellar transport 140 |
acts_upstream_of_or_within |
ISO |
(PMID:25807483) |
RGD |
PMID:25807483 |
|
NCBI chr10:14,032,665...14,121,682
Ensembl chr10:14,032,648...14,120,433
|
|
G |
Ift172 |
intraflagellar transport 172 |
acts_upstream_of_or_within |
ISO |
MGI:2682066 (PMID:15755804) |
RGD |
PMID:15755804 |
|
NCBI chr 6:25,081,933...25,121,271
Ensembl chr 6:25,081,980...25,120,860
|
|
G |
Ift52 |
intraflagellar transport 52 |
acts_upstream_of_or_within |
ISO |
(PMID:15930098) |
RGD |
PMID:15930098 |
|
NCBI chr 3:151,672,505...151,696,975
Ensembl chr 3:151,672,493...151,696,980
|
|
G |
Ift74 |
intraflagellar transport 74 |
acts_upstream_of_or_within |
ISO |
(PMID:25807483) |
RGD |
PMID:25807483 |
|
NCBI chr 5:109,460,372...109,563,839
Ensembl chr 5:109,474,255...109,563,833
|
|
G |
Ift88 |
intraflagellar transport 88 |
acts_upstream_of_or_within |
ISO |
MGI:1859153|MGI:3027342 (PMID:10804177), (PMID:15755804) |
RGD |
PMID:10804177 PMID:15755804 |
|
NCBI chr15:31,573,325...31,666,068
Ensembl chr15:31,573,376...31,672,147
|
|
G |
Kif3a |
kinesin family member 3a |
acts_upstream_of_or_within |
ISO |
MGI:1861960|MGI:3580660 (PMID:10220415), (PMID:15755804) |
RGD |
PMID:10220415 PMID:15755804 |
|
NCBI chr10:37,725,930...37,761,183
Ensembl chr10:37,725,970...37,759,191
|
|
G |
Lefty1 |
left right determination factor 1 |
involved_in |
ISO |
(PMID:9708732) |
RGD |
PMID:9708732 |
|
NCBI chr13:92,649,226...92,659,722
Ensembl chr13:92,656,323...92,659,720
|
|
G |
Megf8 |
multiple EGF-like-domains 8 |
acts_upstream_of_or_within |
ISO |
(PMID:25807483) |
RGD |
PMID:25807483 |
|
NCBI chr 1:80,902,236...80,951,614
Ensembl chr 1:80,902,574...80,951,613
|
|
G |
Mks1 |
MKS transition zone complex subunit 1 |
involved_in acts_upstream_of_or_within |
IEA ISO |
GO_REF:0000107 MGI:4410614|MGI:4887578 (PMID:19776033), (PMID:21045211) |
Ensembl RGD |
PMID:19776033 PMID:21045211 |
GO_REF:0000107 |
NCBI chr10:72,655,921...72,667,007
Ensembl chr10:72,655,921...72,666,655
|
|
G |
Mmp21 |
matrix metallopeptidase 21 |
involved_in acts_upstream_of_or_within |
ISO |
(PMID:26429889), (PMID:26437028) (PMID:26437028) (PMID:25807483) |
RGD |
PMID:25807483 PMID:26429889 PMID:26437028 |
|
NCBI chr 1:188,480,186...188,485,855
Ensembl chr 1:188,480,186...188,485,855
|
|
G |
Nat8f5 |
N-acetyltransferase 8 (GCN5-related) family member 5 |
involved_in acts_upstream_of_or_within |
IEA ISO |
GO_REF:0000107 (PMID:25807483) |
Ensembl RGD |
PMID:25807483 |
GO_REF:0000107 |
NCBI chr 4:118,260,323...118,285,038
Ensembl chr 4:118,260,252...118,285,704
|
|
G |
Nek8 |
NIMA-related kinase 8 |
acts_upstream_of_or_within |
ISO |
(PMID:25807483) |
RGD |
PMID:25807483 |
|
NCBI chr10:63,060,868...63,073,546
Ensembl chr10:63,061,253...63,072,416
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Nkx3-2 |
NK3 homeobox 2 |
acts_upstream_of_or_within |
ISO |
MGI:1931319 (PMID:15329346) |
RGD |
PMID:15329346 |
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NCBI chr14:69,183,795...69,186,182
Ensembl chr14:69,183,820...69,186,061
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Nme7 |
NME/NM23 family member 7 |
acts_upstream_of_or_within involved_in |
ISO IEA |
MGI:4151115 (PMID:21746835) GO_REF:0000107 |
RGD Ensembl |
PMID:21746835 |
GO_REF:0000107 |
NCBI chr13:76,657,303...76,786,768
Ensembl chr13:76,657,367...76,786,765
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Nodal |
nodal growth differentiation factor |
acts_upstream_of_or_within |
ISO |
MGI:106676|MGI:1344365|MGI:2158732|MGI:2180793|MGI:2388004|MGI:2443893 (PMID:11311163), (PMID:12231623), (PMID:12642485), (PMID:12654299), (PMID:15466485), (PMID:16496285), (PMID:28182636) |
RGD |
PMID:11311163 PMID:12231623 PMID:12642485 PMID:12654299 PMID:15466485 PMID:16496285 PMID:28182636 More...
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NCBI chr20:29,368,436...29,376,837
Ensembl chr20:29,368,436...29,376,837
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Notch1 |
notch receptor 1 |
acts_upstream_of_or_within |
ISO |
MGI:1857230|MGI:1857877 (PMID:12730124), (PMID:7789282) |
RGD |
PMID:7789282 PMID:12730124 |
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NCBI chr 3:9,277,955...9,323,531
Ensembl chr 3:9,278,086...9,323,531
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Notch2 |
notch receptor 2 |
acts_upstream_of_or_within |
ISO |
MGI:1933205 (PMID:12730124) |
RGD |
PMID:12730124 |
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NCBI chr 2:185,610,594...185,744,088
Ensembl chr 2:185,610,589...185,744,088
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Noto |
notochord homeobox |
acts_upstream_of_or_within |
ISO |
MGI:3053092 (PMID:17884984), (PMID:20350929), (PMID:22357932) |
RGD |
PMID:17884984 PMID:20350929 PMID:22357932 |
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NCBI chr 4:117,961,163...117,965,402
Ensembl chr 4:117,961,163...117,965,402
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Nphp3 |
nephrocystin 3 |
involved_in |
ISO IBA |
(PMID:18371931) GO_REF:0000033 |
RGD GO_Central |
PMID:18371931 |
GO_REF:0000033 |
NCBI chr 8:104,621,908...104,662,383
Ensembl chr 8:104,621,864...104,662,383
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Odad2 |
outer dynein arm docking complex subunit 2 |
acts_upstream_of_or_within |
ISO |
(PMID:23849778) MGI:5311373 (PMID:23849778), (PMID:25807483) |
RGD |
PMID:23849778 PMID:25807483 |
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NCBI chr17:55,216,877...55,409,872
Ensembl chr17:55,218,991...55,409,399
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Odad3 |
outer dynein arm docking complex subunit 3 |
acts_upstream_of_or_within |
ISO |
(PMID:25192045) MGI:5548687 (PMID:25807483), (PMID:31383820) |
RGD |
PMID:25192045 PMID:25807483 PMID:31383820 |
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NCBI chr 8:20,520,898...20,534,499
Ensembl chr 8:20,520,898...20,534,499
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G |
Pcsk5 |
proprotein convertase subtilisin/kexin type 5 |
involved_in acts_upstream_of_or_within |
IEA ISO |
GO_REF:0000107 (PMID:25807483) |
Ensembl RGD |
PMID:25807483 |
GO_REF:0000107 |
NCBI chr 1:214,837,847...215,267,626
Ensembl chr 1:214,837,927...215,267,600
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Pcsk6 |
proprotein convertase subtilisin/kexin type 6 |
involved_in acts_upstream_of_or_within |
IEA ISO |
GO_REF:0000107 MGI:97359 (PMID:10809672) |
Ensembl RGD |
PMID:10809672 |
GO_REF:0000107 |
NCBI chr 1:119,428,978...119,627,626
Ensembl chr 1:119,429,265...119,627,596
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Pierce1 |
piercer of microtubule wall 1 |
acts_upstream_of_or_within involved_in |
ISO |
MGI:4133392 (PMID:27305836) (PMID:34715025) |
RGD |
PMID:27305836 PMID:34715025 |
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NCBI chr 3:11,797,031...11,801,568
Ensembl chr 3:11,797,031...11,801,568
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Pierce2 |
piercer of microtubule wall 2 |
involved_in |
ISO |
(PMID:34715025) |
RGD |
PMID:34715025 |
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NCBI chr 8:73,715,383...73,719,849
Ensembl chr 8:73,715,383...73,719,849
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Pitx2 |
paired-like homeodomain 2 |
acts_upstream_of_or_within involved_in |
ISO |
MGI:1857844|MGI:1857846|MGI:1857880|MGI:2136268|MGI:2384494|MGI:2445428 (PMID:10498698), (PMID:10499586), (PMID:10572050), (PMID:11493526), (PMID:12397115), (PMID:24091014) (PMID:9708732) |
RGD |
PMID:9708732 PMID:10498698 PMID:10499586 PMID:10572050 PMID:11493526 PMID:12397115 PMID:24091014 More...
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NCBI chr 2:217,717,738...217,737,293
Ensembl chr 2:217,717,693...217,737,293
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Pkd1l1 |
polycystin 1 like 1, transient receptor potential channel interacting |
acts_upstream_of_or_within |
ISO |
(PMID:25807483) |
RGD |
PMID:25807483 |
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NCBI chr14:83,552,964...83,670,062
Ensembl chr14:83,545,469...83,638,498
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Pkd2 |
polycystin 2, transient receptor potential cation channel |
acts_upstream_of_or_within |
ISO |
MGI:2676373 (PMID:12062060) |
RGD |
PMID:12062060 |
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NCBI chr14:5,237,135...5,280,455
Ensembl chr14:5,237,135...5,280,825
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Pskh1 |
protein serine kinase H1 |
acts_upstream_of_or_within |
ISO |
(PMID:25807483) |
RGD |
PMID:25807483 |
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NCBI chr19:33,794,919...33,827,040
Ensembl chr19:33,794,935...33,827,032
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Rfx3 |
regulatory factor X3 |
acts_upstream_of_or_within |
ISO |
MGI:3045792 (PMID:15121860) |
RGD |
PMID:15121860 |
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NCBI chr 1:225,449,872...225,709,622
Ensembl chr 1:225,456,187...225,709,402
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Ripply2 |
ripply transcriptional repressor 2 |
acts_upstream_of_or_within |
ISO |
MGI:3513254 (PMID:17531978) |
RGD |
PMID:17531978 |
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NCBI chr 8:87,974,444...87,979,002
Ensembl chr 8:87,974,776...87,978,969
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Rpgrip1l |
Rpgrip1-like |
acts_upstream_of_or_within |
ISO |
MGI:3716208 (PMID:17553904) |
RGD |
PMID:17553904 |
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NCBI chr19:15,692,189...15,785,083
Ensembl chr19:15,692,150...15,785,083
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Rttn |
rotatin |
acts_upstream_of_or_within |
ISO |
MGI:2674124 (PMID:11900971) |
RGD |
PMID:11900971 |
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NCBI chr18:82,220,999...82,398,334
Ensembl chr18:82,221,050...82,398,333
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Shh |
sonic hedgehog signaling molecule |
acts_upstream_of_or_within |
ISO |
MGI:1857796 (PMID:10385121), (PMID:10411502), (PMID:10500184) |
RGD |
PMID:10385121 PMID:10411502 PMID:10500184 |
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NCBI chr 4:6,954,017...6,963,170
Ensembl chr 4:6,954,017...6,963,170
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Smo |
smoothened, frizzled class receptor |
acts_upstream_of_or_within |
ISO |
MGI:2137553|MGI:2176255 (PMID:12421714), (PMID:15755804) |
RGD |
PMID:12421714 PMID:15755804 |
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NCBI chr 4:58,343,626...58,373,823
Ensembl chr 4:58,343,529...58,373,829
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Stil |
STIL, centriolar assembly protein |
acts_upstream_of_or_within |
ISO |
MGI:2152962 (PMID:10385121) |
RGD |
PMID:10385121 |
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NCBI chr 5:128,520,837...128,573,732
Ensembl chr 5:128,520,953...128,573,730
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Sufu |
SUFU negative regulator of hedgehog signaling |
acts_upstream_of_or_within |
ISO |
MGI:3512046 (PMID:16155214) |
RGD |
PMID:16155214 |
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NCBI chr 1:245,257,725...245,355,576
Ensembl chr 1:245,257,768...245,355,577
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Tbc1d32 |
TBC1 domain family, member 32 |
acts_upstream_of_or_within |
ISO |
(PMID:25807483) |
RGD |
PMID:25807483 |
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NCBI chr20:35,359,865...35,590,992
Ensembl chr20:35,359,863...35,590,415
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Tbx1 |
T-box transcription factor 1 |
involved_in acts_upstream_of_or_within |
ISS ISO |
GO_REF:0000024 MGI:2179191 (PMID:16556915) |
UniProt RGD |
PMID:16556915 |
GO_REF:0000024 |
NCBI chr11:82,409,275...82,419,058
Ensembl chr11:82,409,275...82,418,380
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Tgif1 |
TGFB-induced factor homeobox 1 |
acts_upstream_of_or_within |
ISO |
MGI:3652354 (PMID:16705179) |
RGD |
PMID:16705179 |
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NCBI chr 9:110,748,094...110,757,714
Ensembl chr 9:110,720,921...110,757,802
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Tmem107 |
transmembrane protein 107 |
acts_upstream_of_or_within |
ISO |
MGI:5007367 (PMID:31887266) |
RGD |
PMID:31887266 |
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NCBI chr10:53,772,153...53,774,685
Ensembl chr10:53,771,784...53,774,676
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Tmem67 |
transmembrane protein 67 |
acts_upstream_of_or_within |
ISO |
(PMID:25807483) |
RGD |
PMID:25807483 |
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NCBI chr 5:25,536,458...25,589,378
Ensembl chr 5:25,536,458...25,589,334
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Wnt3a |
Wnt family member 3A |
acts_upstream_of_or_within |
ISO |
MGI:1857489 (PMID:16291790) |
RGD |
PMID:16291790 |
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NCBI chr10:44,034,174...44,078,366
Ensembl chr10:44,034,194...44,078,324
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Wnt5a |
Wnt family member 5A |
acts_upstream_of_or_within |
ISO |
MGI:1857617 (PMID:24091014) |
RGD |
PMID:24091014 |
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NCBI chr16:3,697,032...3,718,230
Ensembl chr16:3,697,032...3,718,234
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Zic3 |
Zic family member 3 |
involved_in acts_upstream_of_or_within |
ISO |
(PMID:9354794) MGI:2180720|MGI:3043027|MGI:97359 (PMID:15384171), (PMID:16496285) |
RGD |
PMID:9354794 PMID:15384171 PMID:16496285 |
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NCBI chr X:136,123,662...136,129,627
Ensembl chr X:136,124,026...136,134,746
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Ccdc39 |
coiled-coil domain 39 molecular ruler complex subunit |
involved_in |
ISO |
(PMID:22693285) |
RGD |
PMID:22693285 |
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NCBI chr 2:116,665,651...116,703,354
Ensembl chr 2:116,665,261...116,703,350
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G |
Ccdc40 |
coiled-coil domain 40 molecular ruler complex subunit |
involved_in |
ISO |
(PMID:22693285) |
RGD |
PMID:22693285 |
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NCBI chr10:104,486,748...104,527,284
Ensembl chr10:104,486,748...104,527,243
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Dnaaf1 |
dynein, axonemal, assembly factor 1 |
involved_in |
ISO IEA |
(PMID:19944405) GO_REF:0000107 |
RGD Ensembl |
PMID:19944405 |
GO_REF:0000107 |
NCBI chr19:47,624,534...47,652,314
Ensembl chr19:47,624,181...47,652,313
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G |
Nphp3 |
nephrocystin 3 |
involved_in |
ISO |
(PMID:20007846) |
RGD |
PMID:20007846 |
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NCBI chr 8:104,621,908...104,662,383
Ensembl chr 8:104,621,864...104,662,383
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G |
Pkd2 |
polycystin 2, transient receptor potential cation channel |
involved_in |
ISO |
(PMID:21719175) |
RGD |
PMID:21719175 |
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NCBI chr14:5,237,135...5,280,455
Ensembl chr14:5,237,135...5,280,825
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G |
Zic3 |
Zic family member 3 |
involved_in |
ISO |
(PMID:9354794) |
RGD |
PMID:9354794 |
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NCBI chr X:136,123,662...136,129,627
Ensembl chr X:136,124,026...136,134,746
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Ccdc39 |
coiled-coil domain 39 molecular ruler complex subunit |
involved_in |
ISO |
(PMID:22693285) |
RGD |
PMID:22693285 |
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NCBI chr 2:116,665,651...116,703,354
Ensembl chr 2:116,665,261...116,703,350
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G |
Ccdc40 |
coiled-coil domain 40 molecular ruler complex subunit |
involved_in |
ISO |
(PMID:22693285) |
RGD |
PMID:22693285 |
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NCBI chr10:104,486,748...104,527,284
Ensembl chr10:104,486,748...104,527,243
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G |
Dnaaf1 |
dynein, axonemal, assembly factor 1 |
involved_in |
IEA ISO |
GO_REF:0000107 (PMID:19944405) |
Ensembl RGD |
PMID:19944405 |
GO_REF:0000107 |
NCBI chr19:47,624,534...47,652,314
Ensembl chr19:47,624,181...47,652,313
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G |
Nphp3 |
nephrocystin 3 |
involved_in |
ISO |
(PMID:20007846) |
RGD |
PMID:20007846 |
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NCBI chr 8:104,621,908...104,662,383
Ensembl chr 8:104,621,864...104,662,383
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G |
Zic3 |
Zic family member 3 |
involved_in |
ISO |
(PMID:9354794) |
RGD |
PMID:9354794 |
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NCBI chr X:136,123,662...136,129,627
Ensembl chr X:136,124,026...136,134,746
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G |
Nphp3 |
nephrocystin 3 |
involved_in |
ISO |
(PMID:18371931) |
RGD |
PMID:18371931 |
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NCBI chr 8:104,621,908...104,662,383
Ensembl chr 8:104,621,864...104,662,383
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Aida |
axin interactor, dorsalization associated |
involved_in |
IBA |
GO_REF:0000033 |
GO_Central |
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GO_REF:0000033 |
NCBI chr13:94,940,311...94,967,920
Ensembl chr13:94,939,741...94,967,920
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Axin1 |
axin 1 |
involved_in acts_upstream_of_or_within |
IEA ISO |
GO_REF:0000107 (PMID:10330403) |
Ensembl RGD |
PMID:10330403 |
GO_REF:0000107 |
NCBI chr10:15,163,477...15,215,615
Ensembl chr10:15,163,684...15,215,615
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Axin2 |
axin 2 |
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IDA |
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RGD |
PMID:9566905 |
RGD:68736 |
NCBI chr10:93,893,830...93,927,042
Ensembl chr10:93,899,245...93,926,231
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Bmpr1a |
bone morphogenetic protein receptor type 1A |
acts_upstream_of_or_within |
ISO |
MGI:2181295 (PMID:12923052) |
RGD |
PMID:12923052 |
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NCBI chr16:9,736,390...9,829,825
Ensembl chr16:9,736,630...9,780,616
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Ctnnb1 |
catenin beta 1 |
involved_in acts_upstream_of_or_within |
IEA ISO |
GO_REF:0000107 MGI:2148594|MGI:2158470 (PMID:12923052) |
Ensembl RGD |
PMID:12923052 |
GO_REF:0000107 |
NCBI chr 8:120,640,008...120,667,110
Ensembl chr 8:120,639,995...120,667,111
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Lrp6 |
LDL receptor related protein 6 |
acts_upstream_of_or_within |
ISO |
MGI:2156191 (PMID:18985738) |
RGD |
PMID:18985738 |
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NCBI chr 4:167,269,856...167,400,364
Ensembl chr 4:167,270,353...167,400,497
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G |
Mdfi |
MyoD family inhibitor |
involved_in |
ISO |
(PMID:11238923) |
RGD |
PMID:11238923 |
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NCBI chr 9:13,156,806...13,175,218
Ensembl chr 9:13,156,866...13,175,217
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Pax6 |
paired box 6 |
involved_in acts_upstream_of_or_within |
IEA ISO |
GO_REF:0000107 MGI:1856155|MGI:1934347 (PMID:10588713) |
Ensembl RGD |
PMID:10588713 |
GO_REF:0000107 |
NCBI chr 3:92,128,772...92,157,022
Ensembl chr 3:92,135,637...92,157,014
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Senp2 |
SUMO specific peptidase 2 |
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IDA |
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RGD |
PMID:10944533 |
RGD:1299408 |
NCBI chr11:78,981,429...79,018,274
Ensembl chr11:78,981,432...79,018,238
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G |
Sfrp1 |
secreted frizzled-related protein 1 |
involved_in |
IEA ISO |
GO_REF:0000107 (PMID:9192640) |
Ensembl RGD |
PMID:9192640 |
GO_REF:0000107 |
NCBI chr16:68,575,763...68,614,180
Ensembl chr16:68,575,763...68,614,286
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Vax2 |
ventral anterior homeobox 2 |
involved_in acts_upstream_of_or_within |
IEA ISO |
GO_REF:0000107 MGI:2159246|MGI:2388160 (PMID:11830578), (PMID:11830579) |
Ensembl RGD |
PMID:11830578 PMID:11830579 |
GO_REF:0000107 |
NCBI chr 4:116,195,528...116,219,597
Ensembl chr 4:116,195,528...116,219,594
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G |
Wnt3 |
Wnt family member 3 |
acts_upstream_of_or_within |
ISO |
MGI:2450902|MGI:2450903 (PMID:12569130) |
RGD |
PMID:12569130 |
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NCBI chr10:88,680,198...88,724,170
Ensembl chr10:88,680,248...88,724,099
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G |
Bmp4 |
bone morphogenetic protein 4 |
involved_in acts_upstream_of_or_within |
IEA ISO |
GO_REF:0000107 (PMID:15218525) |
Ensembl RGD |
PMID:15218525 |
GO_REF:0000107 |
NCBI chr15:19,618,538...19,633,494
Ensembl chr15:19,618,542...19,623,306
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Fkbp8 |
FKBP prolyl isomerase 8 |
acts_upstream_of_or_within |
ISO |
MGI:107689|MGI:3042750|MGI:3775614|MGI:95728 (PMID:18003640), (PMID:18590716) |
RGD |
PMID:18003640 PMID:18590716 |
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NCBI chr16:18,895,608...18,902,648
Ensembl chr16:18,893,576...18,902,612
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G |
Foxa1 |
forkhead box A1 |
involved_in acts_upstream_of_or_within |
IEA ISO |
GO_REF:0000107 MGI:1347476 (PMID:23383217) |
Ensembl RGD |
PMID:23383217 |
GO_REF:0000107 |
NCBI chr 6:75,099,907...75,136,534
Ensembl chr 6:75,103,503...75,136,188
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G |
Foxa2 |
forkhead box A2 |
acts_upstream_of_or_within |
ISO |
MGI:1347472|MGI:95841 (PMID:18590716), (PMID:23383217), (PMID:9226455) |
RGD |
PMID:9226455 PMID:18590716 PMID:23383217 |
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NCBI chr 3:135,470,123...135,474,326
Ensembl chr 3:135,470,131...135,474,326
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G |
Gas1 |
growth arrest-specific 1 |
acts_upstream_of_or_within |
ISO |
MGI:3711070|MGI:98297 (PMID:17504940), (PMID:17504941) |
RGD |
PMID:17504940 PMID:17504941 |
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NCBI chr17:4,482,168...4,485,153
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Gli2 |
GLI family zinc finger 2 |
acts_upstream_of_or_within |
ISO |
MGI:1857509 (PMID:18590716), (PMID:19286674), (PMID:9247260) |
RGD |
PMID:9247260 PMID:18590716 PMID:19286674 |
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NCBI chr13:29,946,882...30,163,589
Ensembl chr13:29,946,809...30,163,574
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G |
Gsc |
goosecoid homeobox |
acts_upstream_of_or_within |
ISO |
MGI:1347476 (PMID:9226455) |
RGD |
PMID:9226455 |
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NCBI chr 6:123,388,072...123,390,111
Ensembl chr 6:123,388,072...123,390,111
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G |
Kif3a |
kinesin family member 3a |
acts_upstream_of_or_within involved_in |
ISO |
MGI:1341070|MGI:1861960|MGI:95728 (PMID:18590716), (PMID:19286674) (PMID:21209331) |
RGD |
PMID:18590716 PMID:19286674 PMID:21209331 |
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NCBI chr10:37,725,930...37,761,183
Ensembl chr10:37,725,970...37,759,191
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Mnx1 |
motor neuron and pancreas homeobox 1 |
acts_upstream_of_or_within |
ISO |
(PMID:18590716) |
RGD |
PMID:18590716 |
|
NCBI chr 4:5,866,506...5,871,465
Ensembl chr 4:5,866,506...5,871,465
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G |
Pax7 |
paired box 7 |
acts_upstream_of_or_within |
ISO |
(PMID:18590716) |
RGD |
PMID:18590716 |
|
NCBI chr 5:151,996,368...152,098,023
Ensembl chr 5:151,999,092...152,097,979
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|
G |
Psen1 |
presenilin 1 |
acts_upstream_of_or_within |
ISO |
MGI:109284 (PMID:10557208) |
RGD |
PMID:10557208 |
|
NCBI chr 6:103,323,052...103,375,088
Ensembl chr 6:103,323,120...103,371,650
|
|
G |
Psen2 |
presenilin 2 |
acts_upstream_of_or_within |
ISO |
MGI:1202717 (PMID:10557208) |
RGD |
PMID:10557208 |
|
NCBI chr13:91,967,506...91,993,240
Ensembl chr13:91,967,983...91,993,174
|
|
G |
Ptch1 |
patched 1 |
acts_upstream_of_or_within |
ISO |
MGI:1857447 (PMID:9262482) |
RGD |
PMID:9262482 |
|
NCBI chr17:1,542,705...1,607,730
Ensembl chr17:1,542,877...1,607,333
|
|
G |
Rab23 |
RAB23, member RAS oncogene family |
involved_in |
ISO |
(PMID:7720556) |
RGD |
PMID:7720556 |
|
NCBI chr 9:35,943,522...35,967,367
Ensembl chr 9:35,944,085...35,966,927
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|
G |
Rnf220 |
ring finger protein 220 |
acts_upstream_of_or_within |
ISO |
MGI:6393918 (PMID:30177510) |
RGD |
PMID:30177510 |
|
NCBI chr 5:130,739,173...130,961,386
Ensembl chr 5:130,739,183...130,961,418
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|
G |
Shh |
sonic hedgehog signaling molecule |
involved_in acts_upstream_of_or_within |
IEA ISO |
GO_REF:0000107 (PMID:21209331) MGI:95655 (PMID:17442700), (PMID:17504941), (PMID:18590716) |
Ensembl RGD |
PMID:17442700 PMID:17504941 PMID:18590716 PMID:21209331 |
GO_REF:0000107 |
NCBI chr 4:6,954,017...6,963,170
Ensembl chr 4:6,954,017...6,963,170
|
|
G |
Smo |
smoothened, frizzled class receptor |
involved_in acts_upstream_of_or_within |
IEA ISO |
GO_REF:0000107 MGI:2176255 (PMID:18590716) |
Ensembl RGD |
PMID:18590716 |
GO_REF:0000107 |
NCBI chr 4:58,343,626...58,373,823
Ensembl chr 4:58,343,529...58,373,829
|
|
G |
Tctn1 |
tectonic family member 1 |
acts_upstream_of_or_within |
ISO |
MGI:3716885 (PMID:16357211) |
RGD |
PMID:16357211 |
|
NCBI chr12:34,309,795...34,347,190
Ensembl chr12:34,309,897...34,342,267
|
|
G |
Tulp3 |
TUB like protein 3 |
acts_upstream_of_or_within |
ISO |
MGI:2388066 (PMID:19286674) |
RGD |
PMID:19286674 |
|
NCBI chr 4:161,590,478...161,632,244
Ensembl chr 4:161,590,479...161,632,149
|
|
G |
Wnt3a |
Wnt family member 3A |
acts_upstream_of_or_within |
ISO |
MGI:1857489 (PMID:8299937) |
RGD |
PMID:8299937 |
|
NCBI chr10:44,034,174...44,078,366
Ensembl chr10:44,034,194...44,078,324
|
|
|
G |
AABR07063281.1 |
|
involved_in |
IEA |
GO_REF:0000107 |
Ensembl |
|
GO_REF:0000107 |
|
|
G |
Acvr1 |
activin A receptor type 1 |
involved_in |
IBA |
GO_REF:0000033 |
GO_Central |
|
GO_REF:0000033 |
NCBI chr 3:42,978,558...43,097,892
Ensembl chr 3:42,978,561...43,098,241
|
|
G |
Acvrl1 |
activin A receptor like type 1 |
involved_in |
IBA |
GO_REF:0000033 |
GO_Central |
|
GO_REF:0000033 |
NCBI chr 7:132,239,200...132,256,592
Ensembl chr 7:132,239,729...132,256,591
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|
G |
Apc |
APC regulator of WNT signaling pathway |
acts_upstream_of_or_within |
ISO |
MGI:2449944 (PMID:12645927) |
RGD |
PMID:12645927 |
|
NCBI chr18:25,828,558...25,925,511
Ensembl chr18:25,864,222...25,922,696
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|
G |
Arl13b |
ARF like GTPase 13B |
acts_upstream_of_or_within |
ISO |
MGI:3578151 (PMID:15755804) |
RGD |
PMID:15755804 |
|
NCBI chr11:150,100...217,103
Ensembl chr11:150,955...217,197
|
|
G |
Axin1 |
axin 1 |
acts_upstream_of_or_within |
ISO |
MGI:1856035 (PMID:18316368) |
RGD |
PMID:18316368 |
|
NCBI chr10:15,163,477...15,215,615
Ensembl chr10:15,163,684...15,215,615
|
|
G |
Bmp1 |
bone morphogenetic protein 1 |
involved_in |
IBA |
GO_REF:0000033 |
GO_Central |
|
GO_REF:0000033 |
NCBI chr15:45,551,603...45,595,862
Ensembl chr15:45,551,603...45,595,776
|
|
G |
Bmpr1a |
bone morphogenetic protein receptor type 1A |
acts_upstream_of_or_within involved_in |
ISO IBA |
MGI:107191 (PMID:15673568) GO_REF:0000033 |
RGD GO_Central |
PMID:15673568 |
GO_REF:0000033 |
NCBI chr16:9,736,390...9,829,825
Ensembl chr16:9,736,630...9,780,616
|
|
G |
Bmpr1b |
bone morphogenetic protein receptor type 1B |
acts_upstream_of_or_within involved_in |
ISO IBA |
MGI:1338938 (PMID:15673568) GO_REF:0000033 |
RGD GO_Central |
PMID:15673568 |
GO_REF:0000033 |
NCBI chr 2:230,538,252...230,871,077
Ensembl chr 2:230,541,558...230,871,368
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|
G |
Chrd |
chordin |
involved_in acts_upstream_of_or_within |
IBA ISO |
GO_REF:0000033 MGI:2157350 (PMID:12810603) |
GO_Central RGD |
PMID:12810603 |
GO_REF:0000033 |
NCBI chr11:80,171,994...80,181,166
Ensembl chr11:80,171,994...80,180,673
|
|
G |
Ctnnb1 |
catenin beta 1 |
acts_upstream_of_or_within |
ISO |
MGI:2148567|MGI:2176173 (PMID:15708565) |
RGD |
PMID:15708565 |
|
NCBI chr 8:120,640,008...120,667,110
Ensembl chr 8:120,639,995...120,667,111
|
|
G |
Disp1 |
dispatched RND transporter family member 1 |
acts_upstream_of_or_within |
ISO |
MGI:2448055 (PMID:15755804) |
RGD |
PMID:15755804 |
|
NCBI chr13:94,720,928...94,866,695
Ensembl chr13:94,720,928...94,866,702
|
|
G |
Dync2h1 |
dynein cytoplasmic 2 heavy chain 1 |
involved_in acts_upstream_of_or_within |
IEA ISO |
GO_REF:0000107 MGI:105373|MGI:3578144|MGI:95729|MGI:98297 (PMID:15755804), (PMID:16061793), (PMID:16229832), (PMID:21552265) |
Ensembl RGD |
PMID:15755804 PMID:16061793 PMID:16229832 PMID:21552265 |
GO_REF:0000107 |
NCBI chr 8:4,189,067...4,412,183
Ensembl chr 8:4,189,257...4,412,183
|
|
G |
Edn1 |
endothelin 1 |
acts_upstream_of_or_within |
ISO |
MGI:1857637 (PMID:15110048) |
RGD |
PMID:15110048 |
|
NCBI chr17:22,454,924...22,460,812
Ensembl chr17:22,454,420...22,460,885
|
|
G |
En1 |
engrailed homeobox 1 |
acts_upstream_of_or_within |
ISO |
MGI:1857163 (PMID:8684466), (PMID:9362463) |
RGD |
PMID:8684466 PMID:9362463 |
|
NCBI chr13:31,750,892...31,756,477
Ensembl chr13:31,751,545...31,755,943
|
|
G |
Fbxl15 |
F-box and leucine-rich repeat protein 15 |
involved_in |
ISS |
GO_REF:0000024 |
UniProt |
|
GO_REF:0000024 |
NCBI chr 1:245,189,732...245,191,973
Ensembl chr 1:245,189,736...245,192,007
|
|
G |
Fgf8 |
fibroblast growth factor 8 |
involved_in |
IBA |
GO_REF:0000033 |
GO_Central |
|
GO_REF:0000033 |
NCBI chr 1:244,584,477...244,590,578
Ensembl chr 1:244,584,652...244,590,359
|
|
G |
Fkbp8 |
FKBP prolyl isomerase 8 |
acts_upstream_of_or_within |
ISO |
MGI:3042750 (PMID:15105374) |
RGD |
PMID:15105374 |
|
NCBI chr16:18,895,608...18,902,648
Ensembl chr16:18,893,576...18,902,612
|
|
G |
Foxa2 |
forkhead box A2 |
acts_upstream_of_or_within |
ISO |
MGI:99783 (PMID:10498685) |
RGD |
PMID:10498685 |
|
NCBI chr 3:135,470,123...135,474,326
Ensembl chr 3:135,470,131...135,474,326
|
|
G |
Foxg1 |
forkhead box G1 |
acts_upstream_of_or_within |
ISO |
MGI:1857771|MGI:1932522 (PMID:14566948), (PMID:15893304) |
RGD |
PMID:14566948 PMID:15893304 |
|
NCBI chr 6:66,674,797...66,677,611
Ensembl chr 6:66,666,587...66,678,607
|
|
G |
Gas1 |
growth arrest-specific 1 |
acts_upstream_of_or_within |
ISO |
MGI:3711070 (PMID:17504940) |
RGD |
PMID:17504940 |
|
NCBI chr17:4,482,168...4,485,153
|
|
G |
Gli1 |
GLI family zinc finger 1 |
acts_upstream_of_or_within |
ISO |
MGI:95728 (PMID:16342201) |
RGD |
PMID:16342201 |
|
NCBI chr 7:63,156,926...63,169,579
Ensembl chr 7:63,156,926...63,169,251
|
|
G |
Gli2 |
GLI family zinc finger 2 |
acts_upstream_of_or_within |
ISO |
MGI:95727 (PMID:16342201) |
RGD |
PMID:16342201 |
|
NCBI chr13:29,946,882...30,163,589
Ensembl chr13:29,946,809...30,163,574
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|
G |
Gli3 |
GLI family zinc finger 3 |
acts_upstream_of_or_within |
ISO |
MGI:1856275|MGI:1856276 (PMID:12435629), (PMID:14723851), (PMID:16571630) |
RGD |
PMID:12435629 PMID:14723851 PMID:16571630 |
|
NCBI chr17:49,438,567...49,709,712
Ensembl chr17:49,438,567...49,709,712
|
|
G |
Hhip |
Hedgehog-interacting protein |
acts_upstream_of_or_within |
ISO |
MGI:105373 (PMID:15576403) |
RGD |
PMID:15576403 |
|
NCBI chr19:27,863,684...27,952,528
Ensembl chr19:27,863,213...27,952,528
|
|
G |
Hoxa11 |
homeobox A11 |
acts_upstream_of_or_within |
ISO |
MGI:96203 (PMID:11493536) |
RGD |
PMID:11493536 |
|
NCBI chr 4:81,342,527...81,346,189
Ensembl chr 4:81,342,528...81,346,232
|
|
G |
Hoxa2 |
homeobox A2 |
involved_in acts_upstream_of_or_within |
IEA ISO |
GO_REF:0000107 MGI:1857626|MGI:96183 (PMID:10230789) |
Ensembl RGD |
PMID:10230789 |
GO_REF:0000107 |
NCBI chr 4:81,262,668...81,266,970
Ensembl chr 4:81,262,768...81,265,044
|
|
G |
Hoxb2 |
homeobox B2 |
acts_upstream_of_or_within |
ISO |
MGI:96174 (PMID:10230789) |
RGD |
PMID:10230789 |
|
NCBI chr10:81,317,828...81,320,220
Ensembl chr10:81,318,026...81,320,192
|
|
G |
Hoxd11 |
homeobox D11 |
acts_upstream_of_or_within |
ISO |
MGI:96172 (PMID:11493536) |
RGD |
PMID:11493536 |
|
NCBI chr 3:59,584,840...59,587,257
Ensembl chr 3:59,585,039...59,586,783
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|
G |
Ift122 |
intraflagellar transport 122 |
acts_upstream_of_or_within |
ISO |
MGI:3578529|MGI:98297 (PMID:15755804), (PMID:21552265) |
RGD |
PMID:15755804 PMID:21552265 |
|
NCBI chr 4:148,905,031...148,975,458
Ensembl chr 4:148,905,046...148,975,458
|
|
G |
Ift172 |
intraflagellar transport 172 |
involved_in acts_upstream_of_or_within |
IEA ISO |
GO_REF:0000107 MGI:108075|MGI:2682066 (PMID:14603322), (PMID:15755804), (PMID:16061793), (PMID:21552265) |
Ensembl RGD |
PMID:14603322 PMID:15755804 PMID:16061793 PMID:21552265 |
GO_REF:0000107 |
NCBI chr 6:25,081,933...25,121,271
Ensembl chr 6:25,081,980...25,120,860
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|
G |
Ift52 |
intraflagellar transport 52 |
acts_upstream_of_or_within |
ISO |
(PMID:15930098) |
RGD |
PMID:15930098 |
|
NCBI chr 3:151,672,505...151,696,975
Ensembl chr 3:151,672,493...151,696,980
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|
G |
Ift88 |
intraflagellar transport 88 |
acts_upstream_of_or_within |
ISO |
MGI:3027342 (PMID:15755804), (PMID:15930098) |
RGD |
PMID:15755804 PMID:15930098 |
|
NCBI chr15:31,573,325...31,666,068
Ensembl chr15:31,573,376...31,672,147
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|
G |
Kif3a |
kinesin family member 3a |
acts_upstream_of_or_within |
ISO |
MGI:3580660 (PMID:15755804) |
RGD |
PMID:15755804 |
|
NCBI chr10:37,725,930...37,761,183
Ensembl chr10:37,725,970...37,759,191
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|
G |
Lhx1 |
LIM homeobox 1 |
involved_in acts_upstream_of_or_within |
ISS ISO |
GO_REF:0000024 MGI:1347476 (PMID:10498685) |
UniProt RGD |
PMID:10498685 |
GO_REF:0000024 |
NCBI chr10:69,396,829...69,403,617
Ensembl chr10:69,396,829...69,403,617
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|
G |
Lhx2 |
LIM homeobox 2 |
involved_in acts_upstream_of_or_within |
IEA ISO |
GO_REF:0000107 MGI:1890208 (PMID:11165475), (PMID:14566948) |
Ensembl RGD |
PMID:11165475 PMID:14566948 |
GO_REF:0000107 |
NCBI chr 3:22,113,619...22,143,909
Ensembl chr 3:22,126,007...22,143,908
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|
G |
Lhx3 |
LIM homeobox 3 |
acts_upstream_of_or_within |
ISO |
MGI:2385819 (PMID:18037398) |
RGD |
PMID:18037398 |
|
NCBI chr 3:9,026,432...9,035,122
Ensembl chr 3:9,027,425...9,034,480
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|
G |
Lmx1b |
LIM homeobox transcription factor 1 beta |
involved_in |
ISO |
(PMID:10767331) |
RGD |
PMID:10767331 |
|
NCBI chr 3:16,862,195...16,940,899
Ensembl chr 3:16,862,195...16,940,899
|
|
G |
Lrp4 |
LDL receptor related protein 4 |
acts_upstream_of_or_within |
ISO |
MGI:3621893|MGI:3707955 (PMID:16207730), (PMID:17119023) |
RGD |
PMID:16207730 PMID:17119023 |
|
NCBI chr 3:77,429,600...77,483,593
Ensembl chr 3:77,429,798...77,483,593
|
|
G |
Nog |
noggin |
involved_in |
IEA ISO |
GO_REF:0000107 (PMID:7666191) |
Ensembl RGD |
PMID:7666191 |
GO_REF:0000107 |
NCBI chr10:74,128,712...74,130,339
Ensembl chr10:74,128,712...74,130,339
|
|
G |
Noto |
notochord homeobox |
acts_upstream_of_or_within |
ISO |
MGI:1857063 (PMID:8155581) |
RGD |
PMID:8155581 |
|
NCBI chr 4:117,961,163...117,965,402
Ensembl chr 4:117,961,163...117,965,402
|
|
G |
Otx2 |
orthodenticle homeobox 2 |
acts_upstream_of_or_within |
ISO |
MGI:2661067 (PMID:12652306) |
RGD |
PMID:12652306 |
|
NCBI chr15:21,942,233...21,953,034
Ensembl chr15:21,943,191...21,953,416
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|
G |
Ovol2 |
ovo-like zinc finger 2 |
acts_upstream_of_or_within |
ISO |
MGI:3522498 (PMID:16423343) |
RGD |
PMID:16423343 |
|
NCBI chr 3:131,677,391...131,707,123
Ensembl chr 3:131,677,391...131,708,359
|
|
G |
Pax6 |
paired box 6 |
acts_upstream_of_or_within |
ISO |
MGI:1856155|MGI:2156741|MGI:3521718 (PMID:15548580), (PMID:15878992) |
RGD |
PMID:15548580 PMID:15878992 |
|
NCBI chr 3:92,128,772...92,157,022
Ensembl chr 3:92,135,637...92,157,014
|
|
G |
Prop1 |
PROP paired-like homeobox 1 |
acts_upstream_of_or_within |
ISO |
MGI:1856842|MGI:3521736 (PMID:12183375), (PMID:15459176) |
RGD |
PMID:12183375 PMID:15459176 |
|
NCBI chr10:35,271,959...35,274,434
Ensembl chr10:35,271,973...35,274,434
|
|
G |
Ptch1 |
patched 1 |
involved_in acts_upstream_of_or_within |
ISS ISO |
GO_REF:0000024 MGI:1341847 (PMID:15576403) |
UniProt RGD |
PMID:15576403 |
GO_REF:0000024 |
NCBI chr17:1,542,705...1,607,730
Ensembl chr17:1,542,877...1,607,333
|
|
G |
Shh |
sonic hedgehog signaling molecule |
involved_in acts_upstream_of_or_within |
ISS ISO |
GO_REF:0000024 MGI:1932386 (PMID:21552265) |
UniProt RGD |
PMID:21552265 |
GO_REF:0000024 |
NCBI chr 4:6,954,017...6,963,170
Ensembl chr 4:6,954,017...6,963,170
|
|
G |
Smo |
smoothened, frizzled class receptor |
acts_upstream_of_or_within |
ISO |
MGI:2137553|MGI:2176173|MGI:2176256 (PMID:15755804), (PMID:16571630) |
RGD |
PMID:15755804 PMID:16571630 |
|
NCBI chr 4:58,343,626...58,373,823
Ensembl chr 4:58,343,529...58,373,829
|
|
G |
Sp8 |
Sp8 transcription factor |
acts_upstream_of_or_within |
ISO |
MGI:2684137 (PMID:14597661) |
RGD |
PMID:14597661 |
|
NCBI chr 6:139,816,258...139,818,865
Ensembl chr 6:139,814,819...139,823,168 Ensembl chr 6:139,814,819...139,823,168
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|
G |
Tbx20 |
T-box transcription factor 20 |
acts_upstream_of_or_within |
ISO |
MGI:3580099 (PMID:15901664) |
RGD |
PMID:15901664 |
|
NCBI chr 8:23,200,104...23,258,218
Ensembl chr 8:23,204,507...23,258,175
|
|
G |
Tgif1 |
TGFB-induced factor homeobox 1 |
acts_upstream_of_or_within |
ISO |
MGI:3698004 (PMID:17082251) |
RGD |
PMID:17082251 |
|
NCBI chr 9:110,748,094...110,757,714
Ensembl chr 9:110,720,921...110,757,802
|
|
G |
Tll1 |
tolloid-like 1 |
involved_in |
IBA |
GO_REF:0000033 |
GO_Central |
|
GO_REF:0000033 |
NCBI chr16:25,509,146...25,710,330
Ensembl chr16:25,509,146...25,709,543
|
|
G |
Tll2 |
tolloid-like 2 |
involved_in |
IBA |
GO_REF:0000033 |
GO_Central |
|
GO_REF:0000033 |
NCBI chr 1:239,912,648...240,028,168
Ensembl chr 1:239,915,508...240,028,120
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|
G |
Wnt7a |
Wnt family member 7A |
acts_upstream_of_or_within |
ISO |
MGI:1857704 (PMID:7885472), (PMID:9362463) |
RGD |
PMID:7885472 PMID:9362463 |
|
NCBI chr 4:123,863,108...123,908,981
Ensembl chr 4:123,863,108...123,908,981
|
|
|
G |
Bmp2 |
bone morphogenetic protein 2 |
involved_in acts_upstream_of_or_within |
IEA ISO |
GO_REF:0000107 MGI:3583785 (PMID:16314491) |
Ensembl RGD |
PMID:16314491 |
GO_REF:0000107 |
NCBI chr 3:120,812,660...120,822,579
Ensembl chr 3:120,812,882...120,821,397
|
|
G |
Foxh1 |
forkhead box H1 |
acts_upstream_of_or_within |
ISO |
MGI:2179442 (PMID:15363409) |
RGD |
PMID:15363409 |
|
NCBI chr 7:108,387,969...108,391,566
Ensembl chr 7:108,387,969...108,390,049
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|
G |
Gata4 |
GATA binding protein 4 |
acts_upstream_of_or_within |
ISO |
MGI:2386265 (PMID:9136932) |
RGD |
PMID:9136932 |
|
NCBI chr15:37,459,601...37,531,291
Ensembl chr15:37,459,601...37,505,636
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|
G |
Cimap3 |
ciliary microtubule associated protein 3 |
acts_upstream_of_or_within |
ISO |
MGI:4819764 (PMID:20643351) |
RGD |
PMID:20643351 |
|
NCBI chr 2:193,475,785...193,493,092
Ensembl chr 2:193,475,782...193,493,139
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|
G |
Cited2 |
Cbp/p300-interacting transactivator, with Glu/Asp-rich carboxy-terminal domain, 2 |
involved_in |
ISO |
(PMID:15475956) |
RGD |
PMID:15475956 |
|
NCBI chr 1:12,312,426...12,314,869
Ensembl chr 1:12,312,160...12,314,897
|
|
G |
Ift122 |
intraflagellar transport 122 |
involved_in |
ISO |
(PMID:21209331) |
RGD |
PMID:21209331 |
|
NCBI chr 4:148,905,031...148,975,458
Ensembl chr 4:148,905,046...148,975,458
|
|
G |
Invs |
inversin |
acts_upstream_of_or_within |
ISO |
MGI:1856915 (PMID:9192865) |
RGD |
PMID:9192865 |
|
NCBI chr 5:62,610,916...62,763,813
Ensembl chr 5:62,610,968...62,763,350
|
|
G |
Megf8 |
multiple EGF-like-domains 8 |
involved_in |
ISS ISO IEA |
GO_REF:0000024 (PMID:24052814) GO_REF:0000107 |
CAFA RGD Ensembl |
PMID:24052814 |
GO_REF:0000024 GO_REF:0000107 |
NCBI chr 1:80,902,236...80,951,614
Ensembl chr 1:80,902,574...80,951,613
|
|
G |
Nkx2-5 |
NK2 homeobox 5 |
involved_in acts_upstream_of_or_within |
IEA ISO |
GO_REF:0000107 MGI:1927227 (PMID:9192865) |
Ensembl RGD |
PMID:9192865 |
GO_REF:0000107 |
NCBI chr10:16,340,428...16,347,004
Ensembl chr10:16,344,159...16,346,934
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|
G |
Pitx2 |
paired-like homeodomain 2 |
involved_in |
ISO |
(PMID:17234970) |
RGD |
PMID:17234970 |
|
NCBI chr 2:217,717,738...217,737,293
Ensembl chr 2:217,717,693...217,737,293
|
|
|
G |
Ccdc39 |
coiled-coil domain 39 molecular ruler complex subunit |
involved_in |
ISO IBA ISS |
(PMID:21131972) GO_REF:0000033 GO_REF:0000024 |
RGD GO_Central UniProt |
PMID:21131972 |
GO_REF:0000024 GO_REF:0000033 |
NCBI chr 2:116,665,651...116,703,354
Ensembl chr 2:116,665,261...116,703,350
|
|
G |
Ccdc40 |
coiled-coil domain 40 molecular ruler complex subunit |
involved_in |
ISO IBA |
(PMID:21131974) GO_REF:0000033 |
RGD GO_Central |
PMID:21131974 |
GO_REF:0000033 |
NCBI chr10:104,486,748...104,527,284
Ensembl chr10:104,486,748...104,527,243
|
|
G |
Cfap45 |
cilia and flagella associated protein 45 |
acts_upstream_of_or_within |
ISO |
MGI:6509073 (PMID:33139725) |
RGD |
PMID:33139725 |
|
NCBI chr13:84,989,474...85,012,880
Ensembl chr13:84,981,728...85,012,878
|
|
G |
Cfap53 |
cilia and flagella associated protein 53 |
acts_upstream_of_or_within |
ISO |
MGI:6720857 (PMID:33347437) |
RGD |
PMID:33347437 |
|
NCBI chr18:67,884,651...67,955,873
Ensembl chr18:67,869,855...67,952,318
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|
G |
Dnaaf11 |
dynein axonemal assembly factor 11 |
involved_in acts_upstream_of_or_within |
ISO |
(PMID:23122589) MGI:6147714 (PMID:27353389) |
RGD |
PMID:23122589 PMID:27353389 |
|
NCBI chr 7:98,141,525...98,245,906
Ensembl chr 7:98,144,763...98,245,837
|
|
G |
Dnah11 |
dynein, axonemal, heavy chain 11 |
acts_upstream_of_or_within |
ISO |
MGI:1856917 (PMID:10549278), (PMID:22102620) |
RGD |
PMID:10549278 PMID:22102620 |
|
NCBI chr 6:138,839,175...139,155,554
Ensembl chr 6:138,839,177...139,155,536
|
|
G |
Invs |
inversin |
acts_upstream_of_or_within |
ISO |
MGI:1856915 (PMID:10549278) |
RGD |
PMID:10549278 |
|
NCBI chr 5:62,610,916...62,763,813
Ensembl chr 5:62,610,968...62,763,350
|
|
G |
Megf8 |
multiple EGF-like-domains 8 |
NOT|acts_upstream_of_or_within |
ISO |
MGI:3722325 (PMID:18043505) |
RGD |
PMID:18043505 |
|
NCBI chr 1:80,902,236...80,951,614
Ensembl chr 1:80,902,574...80,951,613
|
|
G |
Odad3 |
outer dynein arm docking complex subunit 3 |
acts_upstream_of_or_within |
ISO |
MGI:5548687 (PMID:31383820) |
RGD |
PMID:31383820 |
|
NCBI chr 8:20,520,898...20,534,499
Ensembl chr 8:20,520,898...20,534,499
|
|
G |
Odad4 |
outer dynein arm docking complex subunit 4 |
involved_in acts_upstream_of_or_within |
ISO |
(PMID:27486780) MGI:6110171 (PMID:27486780) |
RGD |
PMID:27486780 |
|
NCBI chr10:85,480,089...85,508,603
Ensembl chr10:85,480,094...85,508,603
|
|
G |
Ofd1 |
Ofd1 centriole and centriolar satellite protein |
involved_in |
ISO |
(PMID:16311594) |
RGD |
PMID:16311594 |
|
NCBI chr X:28,015,347...28,056,115
Ensembl chr X:28,015,347...28,056,110
|
|
G |
Rfx3 |
regulatory factor X3 |
involved_in |
ISO |
(PMID:15121860) |
RGD |
PMID:15121860 |
|
NCBI chr 1:225,449,872...225,709,622
Ensembl chr 1:225,456,187...225,709,402
|
|
|
G |
Ccdc39 |
coiled-coil domain 39 molecular ruler complex subunit |
acts_upstream_of_or_within |
ISO |
MGI:5056368 (PMID:29317443) |
RGD |
PMID:29317443 |
|
NCBI chr 2:116,665,651...116,703,354
Ensembl chr 2:116,665,261...116,703,350
|
|
G |
Cfap45 |
cilia and flagella associated protein 45 |
involved_in |
ISO |
(PMID:33139725) |
RGD |
PMID:33139725 |
|
NCBI chr13:84,989,474...85,012,880
Ensembl chr13:84,981,728...85,012,878
|
|
G |
Cfap52 |
cilia and flagella associated protein 52 |
involved_in |
ISO |
(PMID:33139725) |
RGD |
PMID:33139725 |
|
NCBI chr10:52,613,761...52,654,922
Ensembl chr10:52,613,762...52,654,934
|
|
G |
Dnaaf2 |
dynein, axonemal, assembly factor 2 |
involved_in acts_upstream_of_or_within |
IEA ISO |
GO_REF:0000107 MGI:5526981|MGI:5532530 (PMID:23525783), (PMID:31107948) |
Ensembl RGD |
PMID:23525783 PMID:31107948 |
GO_REF:0000107 |
NCBI chr 6:87,661,101...87,670,267
Ensembl chr 6:87,660,821...87,670,199
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|
G |
Enkur |
enkurin, TRPC channel interacting protein |
involved_in acts_upstream_of_or_within |
ISO |
(PMID:29257953) MGI:6156078 (PMID:29257953) |
RGD |
PMID:29257953 |
|
NCBI chr17:83,690,105...83,714,756
Ensembl chr17:83,690,797...83,714,408
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|
G |
Pierce1 |
piercer of microtubule wall 1 |
involved_in |
ISO |
(PMID:27305836) |
RGD |
PMID:27305836 |
|
NCBI chr 3:11,797,031...11,801,568
Ensembl chr 3:11,797,031...11,801,568
|
|
|
G |
Fgf10 |
fibroblast growth factor 10 |
acts_upstream_of_or_within |
ISO |
MGI:1859647 (PMID:16720875) |
RGD |
PMID:16720875 |
|
NCBI chr 2:50,801,171...50,878,218
Ensembl chr 2:50,800,992...50,876,866
|
|
G |
Fgfr2 |
fibroblast growth factor receptor 2 |
acts_upstream_of_or_within |
ISO |
MGI:2153811 (PMID:16720875) |
RGD |
PMID:16720875 |
|
NCBI chr 1:184,745,418...184,850,655
Ensembl chr 1:184,745,420...184,850,626
|
|
|
G |
Fezf1 |
Fez family zinc finger 1 |
acts_upstream_of_or_within |
ISO |
MGI:1859823 (PMID:16971467) |
RGD |
PMID:16971467 |
|
NCBI chr 4:51,762,751...51,766,078
Ensembl chr 4:51,762,751...51,766,078
|
|
G |
Fezf2 |
Fez family zinc finger 2 |
acts_upstream_of_or_within |
ISO |
MGI:1920441 (PMID:16971467) |
RGD |
PMID:16971467 |
|
NCBI chr15:12,768,614...12,777,554
Ensembl chr15:12,773,762...12,777,554
|
|
G |
Six3 |
SIX homeobox 3 |
acts_upstream_of_or_within |
ISO |
MGI:2450901|MGI:98953 (PMID:18094027) |
RGD |
PMID:18094027 |
|
NCBI chr 6:9,039,017...9,043,336
Ensembl chr 6:9,036,434...9,053,301
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|
G |
Wnt1 |
Wnt family member 1 |
acts_upstream_of_or_within |
ISO |
MGI:102764 (PMID:18094027) |
RGD |
PMID:18094027 |
|
NCBI chr 7:129,938,604...129,942,651
Ensembl chr 7:129,938,604...129,942,651
|
|
|
G |
Fgf8 |
fibroblast growth factor 8 |
acts_upstream_of_or_within |
ISO |
MGI:1857843|MGI:2150348 (PMID:16613831) |
RGD |
PMID:16613831 |
|
NCBI chr 1:244,584,477...244,590,578
Ensembl chr 1:244,584,652...244,590,359
|
|
G |
Gli3 |
GLI family zinc finger 3 |
acts_upstream_of_or_within |
ISO |
MGI:1856276 (PMID:10625551) |
RGD |
PMID:10625551 |
|
NCBI chr17:49,438,567...49,709,712
Ensembl chr17:49,438,567...49,709,712
|
|
G |
Gsx2 |
GS homeobox 2 |
acts_upstream_of_or_within |
ISO |
MGI:2150162 (PMID:11060228), (PMID:11124115), (PMID:18701439) |
RGD |
PMID:11060228 PMID:11124115 PMID:18701439 |
|
NCBI chr14:33,123,799...33,126,151
Ensembl chr14:33,124,381...33,126,105
|
|
G |
Nkx2-1 |
NK2 homeobox 1 |
involved_in acts_upstream_of_or_within |
IEA ISO |
GO_REF:0000107 MGI:1857494 (PMID:10393115), (PMID:11163262), (PMID:11830575) |
Ensembl RGD |
PMID:10393115 PMID:11163262 PMID:11830575 |
GO_REF:0000107 |
NCBI chr 6:73,996,601...74,001,483
Ensembl chr 6:73,996,601...73,999,791
|
|
G |
Pax6 |
paired box 6 |
involved_in acts_upstream_of_or_within |
IEA ISO |
GO_REF:0000107 MGI:1856155|MGI:1856158 (PMID:11050125), (PMID:11124115), (PMID:18701439), (PMID:24528677) |
Ensembl RGD |
PMID:11050125 PMID:11124115 PMID:18701439 PMID:24528677 |
GO_REF:0000107 |
NCBI chr 3:92,128,772...92,157,022
Ensembl chr 3:92,135,637...92,157,014
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|
G |
Six3 |
SIX homeobox 3 |
involved_in |
ISO |
(PMID:18791198) |
RGD |
PMID:18791198 |
|
NCBI chr 6:9,039,017...9,043,336
Ensembl chr 6:9,036,434...9,053,301
|
|
G |
Ttc21b |
tetratricopeptide repeat domain 21B |
acts_upstream_of_or_within |
ISO |
MGI:2152544 (PMID:19732765) |
RGD |
PMID:19732765 |
|
NCBI chr 3:50,861,367...50,935,880
Ensembl chr 3:50,861,367...50,935,903
|
|
|
G |
Lhx1 |
LIM homeobox 1 |
involved_in acts_upstream_of_or_within |
ISS ISO |
GO_REF:0000024 MGI:2443342 (PMID:10529425) |
UniProt RGD |
PMID:10529425 |
GO_REF:0000024 |
NCBI chr10:69,396,829...69,403,617
Ensembl chr10:69,396,829...69,403,617
|
|
G |
Pgap1 |
post-GPI attachment to proteins inositol deacylase 1 |
involved_in acts_upstream_of_or_within |
IEA ISO |
GO_REF:0000107 MGI:1856621|MGI:99783 (PMID:10529425) |
Ensembl RGD |
PMID:10529425 |
GO_REF:0000107 |
NCBI chr 9:55,975,574...56,044,325
Ensembl chr 9:55,975,667...56,044,464
|
|
G |
Shh |
sonic hedgehog signaling molecule |
acts_upstream_of_or_within |
ISO |
MGI:3775846|MGI:3840448 (PMID:24528677) |
RGD |
PMID:24528677 |
|
NCBI chr 4:6,954,017...6,963,170
Ensembl chr 4:6,954,017...6,963,170
|
|
G |
Wnt2b |
Wnt family member 2B |
involved_in |
ISO |
(PMID:15164427) |
RGD |
PMID:15164427 |
|
NCBI chr 2:192,454,226...192,468,599
Ensembl chr 2:192,453,824...192,470,308
|
|
G |
Wnt7b |
Wnt family member 7B |
involved_in |
ISO |
(PMID:15164427) |
RGD |
PMID:15164427 |
|
NCBI chr 7:116,634,817...116,679,459
Ensembl chr 7:116,634,814...116,679,581
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|
G |
Pax6 |
paired box 6 |
involved_in acts_upstream_of_or_within |
IEA ISO |
GO_REF:0000107 MGI:1856155|MGI:1856158 (PMID:9169845) |
Ensembl RGD |
PMID:9169845 |
GO_REF:0000107 |
NCBI chr 3:92,128,772...92,157,022
Ensembl chr 3:92,135,637...92,157,014
|
|
|
G |
Ext1 |
exostosin glycosyltransferase 1 |
acts_upstream_of_or_within |
ISO |
(PMID:26295701) |
RGD |
PMID:26295701 |
|
NCBI chr 7:84,375,769...84,654,625
Ensembl chr 7:84,375,784...84,655,357
|
|
|
G |
Bmp2 |
bone morphogenetic protein 2 |
involved_in |
ISO ISS |
(PMID:19736317) GO_REF:0000024 |
RGD UniProt |
PMID:19736317 |
GO_REF:0000024 |
NCBI chr 3:120,812,660...120,822,579
Ensembl chr 3:120,812,882...120,821,397
|
|
G |
Bmp4 |
bone morphogenetic protein 4 |
involved_in |
ISO ISS IEA |
(PMID:20702560) GO_REF:0000024 GO_REF:0000107 |
RGD UniProt Ensembl |
PMID:20702560 |
GO_REF:0000024 GO_REF:0000107 |
NCBI chr15:19,618,538...19,633,494
Ensembl chr15:19,618,542...19,623,306
|
|
G |
Dkk1 |
dickkopf WNT signaling pathway inhibitor 1 |
involved_in |
ISO |
(PMID:18297060) |
RGD |
PMID:18297060 |
|
NCBI chr 1:228,381,521...228,385,202
Ensembl chr 1:228,381,521...228,385,202
|
|
G |
Gata5 |
GATA binding protein 5 |
involved_in |
ISO |
(PMID:21633169) |
RGD |
PMID:21633169 |
|
NCBI chr 3:167,418,563...167,426,751
Ensembl chr 3:167,418,565...167,426,751
|
|
G |
Mesp1 |
mesoderm posterior bHLH transcription factor 1 |
involved_in |
ISO |
(PMID:18297060), (PMID:18593560) |
RGD |
PMID:18297060 PMID:18593560 |
|
NCBI chr 1:133,738,357...133,739,875
Ensembl chr 1:133,738,357...133,739,875
|
|
G |
Pou5f1 |
POU class 5 homeobox 1 |
involved_in |
ISO |
(PMID:19736317) |
RGD |
PMID:19736317 |
|
NCBI chr20:3,227,836...3,232,598
Ensembl chr20:3,223,129...3,227,891
|
|
G |
Robo1 |
roundabout guidance receptor 1 |
involved_in |
ISO |
(PMID:25691540) |
RGD |
PMID:25691540 |
|
NCBI chr11:10,580,863...11,621,675
Ensembl chr11:10,580,908...11,620,203
|
|
G |
Robo2 |
roundabout guidance receptor 2 |
involved_in |
ISO |
(PMID:25691540) |
RGD |
PMID:25691540 |
|
NCBI chr11:12,528,949...14,096,726
Ensembl chr11:12,528,951...13,041,536
|
|
|
G |
AABR07063281.1 |
|
involved_in |
IEA |
GO_REF:0000107 |
Ensembl |
|
GO_REF:0000107 |
|
|
G |
Ahi1 |
Abelson helper integration site 1 |
involved_in |
ISS |
GO_REF:0000024 |
UniProt |
|
GO_REF:0000024 |
NCBI chr 1:15,762,485...15,891,213
Ensembl chr 1:15,762,462...15,891,041
|
|
G |
Aplnr |
apelin receptor |
involved_in |
ISO |
(PMID:23603510) |
RGD |
PMID:23603510 |
|
NCBI chr 3:70,217,407...70,221,052
Ensembl chr 3:70,217,385...70,221,050
|
|
G |
Arl13b |
ARF like GTPase 13B |
acts_upstream_of_or_within |
ISO |
MGI:3578151 (PMID:22554696) |
RGD |
PMID:22554696 |
|
NCBI chr11:150,100...217,103
Ensembl chr11:150,955...217,197
|
|
G |
Asb2 |
ankyrin repeat and SOCS box-containing 2 |
involved_in |
ISO |
(PMID:32179481) |
RGD |
PMID:32179481 |
|
NCBI chr 6:122,474,754...122,511,014
Ensembl chr 6:122,474,756...122,510,854
|
|
G |
C2cd3 |
C2 domain containing 3 centriole elongation regulator |
acts_upstream_of_or_within |
ISO |
(PMID:19004860) |
RGD |
PMID:19004860 |
|
NCBI chr 1:154,715,151...154,812,955
Ensembl chr 1:154,715,310...154,812,520
|
|
G |
Ccdc39 |
coiled-coil domain 39 molecular ruler complex subunit |
involved_in |
ISO |
(PMID:22693285) |
RGD |
PMID:22693285 |
|
NCBI chr 2:116,665,651...116,703,354
Ensembl chr 2:116,665,261...116,703,350
|
|
G |
Ccdc40 |
coiled-coil domain 40 molecular ruler complex subunit |
involved_in |
ISO IBA |
(PMID:22693285) GO_REF:0000033 |
RGD GO_Central |
PMID:22693285 |
GO_REF:0000033 |
NCBI chr10:104,486,748...104,527,284
Ensembl chr10:104,486,748...104,527,243
|
|
G |
Cfc1 |
cripto, FRL-1, cryptic family 1 |
acts_upstream_of_or_within |
ISO |
MGI:2179530 (PMID:10521397) |
RGD |
PMID:10521397 |
|
NCBI chr 9:36,742,106...36,751,931
Ensembl chr 9:36,739,071...36,751,930
|
|
G |
Cited2 |
Cbp/p300-interacting transactivator, with Glu/Asp-rich carboxy-terminal domain, 2 |
acts_upstream_of_or_within |
ISO |
MGI:2176158 (PMID:15750185) |
RGD |
PMID:15750185 |
|
NCBI chr 1:12,312,426...12,314,869
Ensembl chr 1:12,312,160...12,314,897
|
|
G |
Cluap1 |
clusterin associated protein 1 |
involved_in acts_upstream_of_or_within |
IEA ISO |
GO_REF:0000107 MGI:5523142 (PMID:23742838) |
Ensembl RGD |
PMID:23742838 |
GO_REF:0000107 |
NCBI chr10:11,587,963...11,619,711
Ensembl chr10:11,588,017...11,619,711
|
|
G |
Dll1 |
delta like canonical Notch ligand 1 |
involved_in |
IEA ISO |
GO_REF:0000107 (PMID:12730124) |
Ensembl RGD |
PMID:12730124 |
GO_REF:0000107 |
NCBI chr 1:56,312,062...56,320,177
Ensembl chr 1:56,312,066...56,320,179
|
|
G |
Dnaaf1 |
dynein, axonemal, assembly factor 1 |
involved_in |
ISO IEA |
(PMID:19944400), (PMID:19944405) GO_REF:0000107 |
RGD Ensembl |
PMID:19944400 PMID:19944405 |
GO_REF:0000107 |
NCBI chr19:47,624,534...47,652,314
Ensembl chr19:47,624,181...47,652,313
|
|
G |
Dnaaf19 |
dynein axonemal assembly factor 19 |
involved_in |
ISO |
(PMID:22581229) |
RGD |
PMID:22581229 |
|
NCBI chr10:87,846,327...87,849,959
Ensembl chr10:87,846,357...87,849,757
|
|
G |
Dvl1 |
dishevelled segment polarity protein 1 |
involved_in |
ISO |
UniProtKB:Q60838 (PMID:22841628) |
RGD |
PMID:22841628 |
|
NCBI chr 5:166,456,989...166,468,733
Ensembl chr 5:166,456,686...166,468,664
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|
G |
Dvl2 |
dishevelled segment polarity protein 2 |
involved_in |
ISO |
UniProtKB:P51141 (PMID:22841628) |
RGD |
PMID:22841628 |
|
NCBI chr10:54,723,356...54,732,823
Ensembl chr10:54,723,411...54,732,820
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|
G |
Eng |
endoglin |
involved_in |
ISO |
(PMID:10348742), (PMID:19703439) |
RGD |
PMID:10348742 PMID:19703439 |
|
NCBI chr 3:15,934,566...15,972,618
Ensembl chr 3:15,934,518...15,973,230
|
|
G |
Fgf8 |
fibroblast growth factor 8 |
acts_upstream_of_or_within |
ISO |
MGI:1857843 (PMID:10411502) |
RGD |
PMID:10411502 |
|
NCBI chr 1:244,584,477...244,590,578
Ensembl chr 1:244,584,652...244,590,359
|
|
G |
Folr1 |
folate receptor alpha |
involved_in |
ISO |
(PMID:17286298) |
RGD |
PMID:17286298 |
|
NCBI chr 1:156,219,460...156,238,436
Ensembl chr 1:156,219,460...156,230,667
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|
G |
Foxh1 |
forkhead box H1 |
involved_in |
ISO |
(PMID:15363409) |
RGD |
PMID:15363409 |
|
NCBI chr 7:108,387,969...108,391,566
Ensembl chr 7:108,387,969...108,390,049
|
|
G |
Gata4 |
GATA binding protein 4 |
involved_in |
ISO |
(PMID:15310850) |
RGD |
PMID:15310850 |
|
NCBI chr15:37,459,601...37,531,291
Ensembl chr15:37,459,601...37,505,636
|
|
G |
Gja1 |
gap junction protein, alpha 1 |
acts_upstream_of_or_within |
ISO |
MGI:1857177 (PMID:9486664) |
RGD |
PMID:9486664 |
|
NCBI chr20:35,756,007...35,768,481
Ensembl chr20:35,755,991...35,768,582
|
|
G |
Hand1 |
heart and neural crest derivatives expressed 1 |
acts_upstream_of_or_within |
ISO |
MGI:2153823 (PMID:9500551) |
RGD |
PMID:9500551 |
|
NCBI chr10:42,006,646...42,009,213
Ensembl chr10:42,006,651...42,009,213
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|
G |
Hand2 |
heart and neural crest derivatives expressed 2 |
involved_in acts_upstream_of_or_within |
IEA ISO |
GO_REF:0000107 MGI:1857639 (PMID:9171826) |
Ensembl RGD |
PMID:9171826 |
GO_REF:0000107 |
NCBI chr16:32,917,448...32,920,791
Ensembl chr16:32,917,823...32,919,891
|
|
G |
Hif1a |
hypoxia inducible factor 1 subunit alpha |
involved_in acts_upstream_of_or_within |
IEA ISO |
GO_REF:0000107 MGI:2179429 (PMID:14659802) |
Ensembl RGD |
PMID:14659802 |
GO_REF:0000107 |
NCBI chr 6:92,624,059...92,669,262
Ensembl chr 6:92,624,390...92,669,261
|
|
G |
Ift172 |
intraflagellar transport 172 |
involved_in acts_upstream_of_or_within |
IEA ISO |
GO_REF:0000107 MGI:3829198 (PMID:18930042) |
Ensembl RGD |
PMID:18930042 |
GO_REF:0000107 |
NCBI chr 6:25,081,933...25,121,271
Ensembl chr 6:25,081,980...25,120,860
|
|
G |
Ift52 |
intraflagellar transport 52 |
acts_upstream_of_or_within |
ISO |
(PMID:15930098) |
RGD |
PMID:15930098 |
|
NCBI chr 3:151,672,505...151,696,975
Ensembl chr 3:151,672,493...151,696,980
|
|
G |
Ift57 |
intraflagellar transport 57 |
acts_upstream_of_or_within |
ISO |
MGI:3707373 (PMID:17027958) |
RGD |
PMID:17027958 |
|
NCBI chr11:51,051,520...51,124,909
Ensembl chr11:51,059,611...51,124,812
|
|
G |
Ihh |
Indian hedgehog signaling molecule |
involved_in |
ISO |
(PMID:11517919) |
RGD |
PMID:11517919 |
|
NCBI chr 9:76,504,315...76,510,532
Ensembl chr 9:76,504,315...76,510,532
|
|
G |
Kdm2a |
lysine demethylase 2A |
acts_upstream_of_or_within |
ISO |
(PMID:25463925) |
RGD |
PMID:25463925 |
|
NCBI chr 1:201,612,427...201,682,359
Ensembl chr 1:201,612,453...201,680,787
|
|
G |
Kif3a |
kinesin family member 3a |
acts_upstream_of_or_within |
ISO |
MGI:2181727 (PMID:10330409) |
RGD |
PMID:10330409 |
|
NCBI chr10:37,725,930...37,761,183
Ensembl chr10:37,725,970...37,759,191
|
|
G |
Lbx1 |
ladybird homeobox 1 |
acts_upstream_of_or_within |
ISO |
MGI:2386948 (PMID:12522123) |
RGD |
PMID:12522123 |
|
NCBI chr 1:244,083,873...244,085,690
Ensembl chr 1:244,083,873...244,085,690
|
|
G |
Lrp6 |
LDL receptor related protein 6 |
acts_upstream_of_or_within |
ISO |
MGI:98958 (PMID:19795512) |
RGD |
PMID:19795512 |
|
NCBI chr 4:167,269,856...167,400,364
Ensembl chr 4:167,270,353...167,400,497
|
|
G |
Mef2c |
myocyte enhancer factor 2C |
involved_in |
ISS ISO |
GO_REF:0000024 (PMID:16680724) |
UniProt RGD |
PMID:16680724 |
GO_REF:0000024 |
NCBI chr 2:13,973,299...14,136,065
Ensembl chr 2:13,993,438...14,132,880
|
|
G |
Mesp1 |
mesoderm posterior bHLH transcription factor 1 |
involved_in |
ISO |
(PMID:10393122) |
RGD |
PMID:10393122 |
|
NCBI chr 1:133,738,357...133,739,875
Ensembl chr 1:133,738,357...133,739,875
|
|
G |
Mib1 |
MIB E3 ubiquitin protein ligase 1 |
acts_upstream_of_or_within |
ISO |
MGI:3603514 (PMID:16000382) |
RGD |
PMID:16000382 |
|
NCBI chr18:2,075,309...2,199,774
Ensembl chr18:1,802,519...1,920,689
|
|
G |
Mical2 |
microtubule associated monooxygenase, calponin and LIM domain containing 2 |
involved_in |
ISS |
GO_REF:0000024 |
UniProt |
|
GO_REF:0000024 |
NCBI chr 1:166,345,853...166,530,575
Ensembl chr 1:166,345,859...166,471,719 Ensembl chr 1:166,345,859...166,471,719
|
|
G |
Nkx2-5 |
NK2 homeobox 5 |
involved_in acts_upstream_of_or_within |
IEA ISO |
GO_REF:0000107 MGI:1927227 (PMID:16510504), (PMID:7628699), (PMID:9192865) |
Ensembl RGD |
PMID:7628699 PMID:9192865 PMID:16510504 |
GO_REF:0000107 |
NCBI chr10:16,340,428...16,347,004
Ensembl chr10:16,344,159...16,346,934
|
|
G |
Nodal |
nodal growth differentiation factor |
acts_upstream_of_or_within |
ISO |
MGI:106676 (PMID:16496285) |
RGD |
PMID:16496285 |
|
NCBI chr20:29,368,436...29,376,837
Ensembl chr20:29,368,436...29,376,837
|
|
G |
Notch1 |
notch receptor 1 |
involved_in |
ISO |
UniProtKB:O35516 (PMID:12730124) |
RGD |
PMID:12730124 |
|
NCBI chr 3:9,277,955...9,323,531
Ensembl chr 3:9,278,086...9,323,531
|
|
G |
Notch2 |
notch receptor 2 |
involved_in |
IEA ISO |
GO_REF:0000107 UniProtKB:Q01705 (PMID:12730124) |
Ensembl RGD |
PMID:12730124 |
GO_REF:0000107 |
NCBI chr 2:185,610,594...185,744,088
Ensembl chr 2:185,610,589...185,744,088
|
|
G |
Noto |
notochord homeobox |
acts_upstream_of_or_within |
ISO |
MGI:3053092 (PMID:17884984) |
RGD |
PMID:17884984 |
|
NCBI chr 4:117,961,163...117,965,402
Ensembl chr 4:117,961,163...117,965,402
|
|
G |
Nphp3 |
nephrocystin 3 |
involved_in |
ISO |
(PMID:18371931), (PMID:20007846) |
RGD |
PMID:18371931 PMID:20007846 |
|
NCBI chr 8:104,621,908...104,662,383
Ensembl chr 8:104,621,864...104,662,383
|
|
G |
Ovol2 |
ovo-like zinc finger 2 |
acts_upstream_of_or_within |
ISO |
MGI:3777011 (PMID:17573777) |
RGD |
PMID:17573777 |
|
NCBI chr 3:131,677,391...131,707,123
Ensembl chr 3:131,677,391...131,708,359
|
|
G |
Pkd2 |
polycystin 2, transient receptor potential cation channel |
involved_in |
ISO |
(PMID:21719175) |
RGD |
PMID:21719175 |
|
NCBI chr14:5,237,135...5,280,455
Ensembl chr14:5,237,135...5,280,825
|
|
G |
Psen1 |
presenilin 1 |
acts_upstream_of_or_within |
ISO |
MGI:109284 (PMID:10557208) |
RGD |
PMID:10557208 |
|
NCBI chr 6:103,323,052...103,375,088
Ensembl chr 6:103,323,120...103,371,650
|
|
G |
Shh |
sonic hedgehog signaling molecule |
involved_in acts_upstream_of_or_within |
IEA ISO |
GO_REF:0000107 (PMID:11517919) MGI:1857796 (PMID:10411502), (PMID:10500184) |
Ensembl RGD |
PMID:10411502 PMID:10500184 PMID:11517919 |
GO_REF:0000107 |
NCBI chr 4:6,954,017...6,963,170
Ensembl chr 4:6,954,017...6,963,170
|
|
G |
Smad3 |
SMAD family member 3 |
acts_upstream_of_or_within |
ISO |
MGI:108051 (PMID:15183723) |
RGD |
PMID:15183723 |
|
NCBI chr 8:64,126,829...64,236,960
Ensembl chr 8:64,110,039...64,236,960
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|
G |
Smo |
smoothened, frizzled class receptor |
involved_in |
IEA ISO ISS |
GO_REF:0000107 (PMID:11517919) GO_REF:0000024 |
Ensembl RGD UniProt |
PMID:11517919 |
GO_REF:0000024 GO_REF:0000107 |
NCBI chr 4:58,343,626...58,373,823
Ensembl chr 4:58,343,529...58,373,829
|
|
G |
Sox17 |
SRY-box transcription factor 17 |
acts_upstream_of_or_within involved_in |
ISO |
MGI:2179440 (PMID:17610846) (PMID:17610846), (PMID:17655922) |
RGD |
PMID:17610846 PMID:17655922 |
|
NCBI chr 5:15,016,660...15,022,228
Ensembl chr 5:15,016,731...15,022,228
|
|
G |
Srf |
serum response factor |
acts_upstream_of_or_within |
ISO |
MGI:2385465|MGI:2386742 (PMID:15929941) |
RGD |
PMID:15929941 |
|
NCBI chr 9:14,426,453...14,435,734
Ensembl chr 9:14,426,472...14,435,733
|
|
G |
Stil |
STIL, centriolar assembly protein |
acts_upstream_of_or_within |
ISO |
MGI:2152962 (PMID:10385121) |
RGD |
PMID:10385121 |
|
NCBI chr 5:128,520,837...128,573,732
Ensembl chr 5:128,520,953...128,573,730
|
|
G |
Sufu |
SUFU negative regulator of hedgehog signaling |
acts_upstream_of_or_within |
ISO |
MGI:3512046 (PMID:16155214) |
RGD |
PMID:16155214 |
|
NCBI chr 1:245,257,725...245,355,576
Ensembl chr 1:245,257,768...245,355,577
|
|
G |
Tbx20 |
T-box transcription factor 20 |
acts_upstream_of_or_within involved_in |
ISO IBA |
MGI:3579849|MGI:3580099 (PMID:15843407), (PMID:15901664) GO_REF:0000033 (PMID:15843409) |
RGD GO_Central |
PMID:15843407 PMID:15843409 PMID:15901664 |
GO_REF:0000033 |
NCBI chr 8:23,200,104...23,258,218
Ensembl chr 8:23,204,507...23,258,175
|
|
G |
Tbx3 |
T-box transcription factor 3 |
acts_upstream_of_or_within |
ISO |
MGI:2655214|MGI:3769504 (PMID:17460765), (PMID:18723448) |
RGD |
PMID:17460765 PMID:18723448 |
|
NCBI chr12:36,879,924...36,894,849
Ensembl chr12:36,881,445...36,893,708
|
|
G |
Tgfbr2 |
transforming growth factor, beta receptor 2 |
involved_in |
IEA ISO |
GO_REF:0000107 (PMID:17050629) |
Ensembl RGD |
PMID:17050629 |
GO_REF:0000107 |
NCBI chr 8:115,794,537...115,883,615
Ensembl chr 8:115,794,537...115,883,228
|
|
G |
Tmed2 |
transmembrane p24 trafficking protein 2 |
involved_in acts_upstream_of_or_within |
IEA ISO |
GO_REF:0000107 MGI:4343479|MGI:4456438 (PMID:20178780) |
Ensembl RGD |
PMID:20178780 |
GO_REF:0000107 |
NCBI chr12:32,052,542...32,061,628
Ensembl chr12:32,052,543...32,071,903
|
|
G |
Vangl2 |
VANGL planar cell polarity protein 2 |
involved_in |
ISO |
(PMID:11440971) |
RGD |
PMID:11440971 |
|
NCBI chr13:84,462,731...84,489,404
Ensembl chr13:84,465,527...84,489,378
|
|
G |
Wnt3a |
Wnt family member 3A |
acts_upstream_of_or_within |
ISO |
MGI:1857489 (PMID:16291790) |
RGD |
PMID:16291790 |
|
NCBI chr10:44,034,174...44,078,366
Ensembl chr10:44,034,194...44,078,324
|
|
G |
Wnt5a |
Wnt family member 5A |
involved_in acts_upstream_of_or_within |
IEA ISO |
GO_REF:0000107 MGI:1298218 (PMID:19795512) |
Ensembl RGD |
PMID:19795512 |
GO_REF:0000107 |
NCBI chr16:3,697,032...3,718,230
Ensembl chr16:3,697,032...3,718,234
|
|
G |
Zic3 |
Zic family member 3 |
involved_in acts_upstream_of_or_within |
ISO |
(PMID:9354794) MGI:2180720|MGI:3043027|MGI:97359 (PMID:15384171), (PMID:16496285) |
RGD |
PMID:9354794 PMID:15384171 PMID:16496285 |
|
NCBI chr X:136,123,662...136,129,627
Ensembl chr X:136,124,026...136,134,746
|
|
|
G |
AABR07063281.1 |
|
involved_in |
IEA |
GO_REF:0000107 |
Ensembl |
|
GO_REF:0000107 |
|
|
G |
Arl13b |
ARF like GTPase 13B |
acts_upstream_of_or_within |
ISO |
MGI:3578151 (PMID:22554696) |
RGD |
PMID:22554696 |
|
NCBI chr11:150,100...217,103
Ensembl chr11:150,955...217,197
|
|
G |
Cited2 |
Cbp/p300-interacting transactivator, with Glu/Asp-rich carboxy-terminal domain, 2 |
involved_in |
ISO |
(PMID:15475956) |
RGD |
PMID:15475956 |
|
NCBI chr 1:12,312,426...12,314,869
Ensembl chr 1:12,312,160...12,314,897
|
|
G |
Dll1 |
delta like canonical Notch ligand 1 |
involved_in |
IEA ISO |
GO_REF:0000107 (PMID:12730124) |
Ensembl RGD |
PMID:12730124 |
GO_REF:0000107 |
NCBI chr 1:56,312,062...56,320,177
Ensembl chr 1:56,312,066...56,320,179
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|
G |
Epb41l5 |
erythrocyte membrane protein band 4.1 like 5 |
acts_upstream_of_or_within |
ISO |
MGI:3578147 (PMID:20678497) |
RGD |
PMID:20678497 |
|
NCBI chr13:30,670,792...30,770,213
Ensembl chr13:30,669,764...30,768,360
|
|
G |
Ift172 |
intraflagellar transport 172 |
involved_in acts_upstream_of_or_within |
IEA ISO |
GO_REF:0000107 MGI:2682066|MGI:3829198 (PMID:18930042), (PMID:22554696) |
Ensembl RGD |
PMID:18930042 PMID:22554696 |
GO_REF:0000107 |
NCBI chr 6:25,081,933...25,121,271
Ensembl chr 6:25,081,980...25,120,860
|
|
G |
Ift25 |
intraflagellar transport 25 |
acts_upstream_of_or_within |
ISO |
MGI:4432759|MGI:5426875 (PMID:22595669) |
RGD |
PMID:22595669 |
|
NCBI chr 5:122,035,588...122,062,421
Ensembl chr 5:122,035,581...122,062,421
|
|
G |
Mns1 |
meiosis-specific nuclear structural 1 |
acts_upstream_of_or_within |
ISO |
MGI:5425368 (PMID:22396656) |
RGD |
PMID:22396656 |
|
NCBI chr 8:73,148,877...73,169,570
Ensembl chr 8:73,148,877...73,176,925
|
|
G |
Notch1 |
notch receptor 1 |
involved_in |
ISO |
UniProtKB:O35516 (PMID:12730124) |
RGD |
PMID:12730124 |
|
NCBI chr 3:9,277,955...9,323,531
Ensembl chr 3:9,278,086...9,323,531
|
|
G |
Notch2 |
notch receptor 2 |
involved_in |
IEA ISO |
GO_REF:0000107 UniProtKB:Q01705 (PMID:12730124) |
Ensembl RGD |
PMID:12730124 |
GO_REF:0000107 |
NCBI chr 2:185,610,594...185,744,088
Ensembl chr 2:185,610,589...185,744,088
|
|
G |
Pitx2 |
paired-like homeodomain 2 |
involved_in |
ISO |
(PMID:15475956) |
RGD |
PMID:15475956 |
|
NCBI chr 2:217,717,738...217,737,293
Ensembl chr 2:217,717,693...217,737,293
|
|
G |
Pkd1l1 |
polycystin 1 like 1, transient receptor potential channel interacting |
involved_in |
ISO |
(PMID:21307093) |
RGD |
PMID:21307093 |
|
NCBI chr14:83,552,964...83,670,062
Ensembl chr14:83,545,469...83,638,498
|
|
G |
Smo |
smoothened, frizzled class receptor |
involved_in acts_upstream_of_or_within |
IEA ISO |
GO_REF:0000107 MGI:2137553 (PMID:9636176) |
Ensembl RGD |
PMID:9636176 |
GO_REF:0000107 |
NCBI chr 4:58,343,626...58,373,823
Ensembl chr 4:58,343,529...58,373,829
|
|
G |
Zic3 |
Zic family member 3 |
involved_in |
ISO |
MGI:3698161 (PMID:17127413) |
RGD |
PMID:17127413 |
|
NCBI chr X:136,123,662...136,129,627
Ensembl chr X:136,124,026...136,134,746
|
|
|
G |
Cited2 |
Cbp/p300-interacting transactivator, with Glu/Asp-rich carboxy-terminal domain, 2 |
involved_in |
IBA |
GO_REF:0000033 |
GO_Central |
|
GO_REF:0000033 |
NCBI chr 1:12,312,426...12,314,869
Ensembl chr 1:12,312,160...12,314,897
|
|
G |
Cluap1 |
clusterin associated protein 1 |
acts_upstream_of_or_within |
ISO |
MGI:5523142 (PMID:23742838) |
RGD |
PMID:23742838 |
|
NCBI chr10:11,587,963...11,619,711
Ensembl chr10:11,588,017...11,619,711
|
|
G |
Dmrt2 |
doublesex and mab-3 related transcription factor 2 |
NOT|acts_upstream_of_or_within |
ISO |
MGI:3512139 (PMID:21203428) |
RGD |
PMID:21203428 |
|
NCBI chr 1:223,317,543...223,324,131
Ensembl chr 1:223,317,642...223,324,131
|
|
G |
Dnaaf1 |
dynein, axonemal, assembly factor 1 |
involved_in |
ISO |
(PMID:19944400) |
RGD |
PMID:19944400 |
|
NCBI chr19:47,624,534...47,652,314
Ensembl chr19:47,624,181...47,652,313
|
|
G |
Dpcd |
deleted in primary ciliary dyskinesia |
acts_upstream_of_or_within |
ISO |
(PMID:20080492) |
RGD |
PMID:20080492 |
|
NCBI chr 1:244,408,766...244,426,891
Ensembl chr 1:244,408,785...244,426,888
|
|
G |
Foxj1 |
forkhead box J1 |
acts_upstream_of_or_within |
ISO |
MGI:2158221 (PMID:10873152) |
RGD |
PMID:10873152 |
|
NCBI chr10:101,566,299...101,570,370
Ensembl chr10:101,566,304...101,570,237
|
|
G |
Ift57 |
intraflagellar transport 57 |
acts_upstream_of_or_within |
ISO |
MGI:3707373 (PMID:17027958) |
RGD |
PMID:17027958 |
|
NCBI chr11:51,051,520...51,124,909
Ensembl chr11:51,059,611...51,124,812
|
|
G |
Megf8 |
multiple EGF-like-domains 8 |
involved_in acts_upstream_of_or_within |
ISO ISS |
(PMID:23063620) (PMID:24052814) (PMID:32203821), (PMID:32966817) GO_REF:0000024 |
RGD CAFA |
PMID:23063620 PMID:24052814 PMID:32203821 PMID:32966817 |
GO_REF:0000024 |
NCBI chr 1:80,902,236...80,951,614
Ensembl chr 1:80,902,574...80,951,613
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|
G |
Mosmo |
modulator of smoothened |
acts_upstream_of_or_within |
ISO |
(PMID:34486668) |
RGD |
PMID:34486668 |
|
NCBI chr 1:175,217,680...175,288,521
Ensembl chr 1:175,217,545...175,288,334
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|
G |
Nme7 |
NME/NM23 family member 7 |
acts_upstream_of_or_within |
ISO |
MGI:4151115 (PMID:20080492) |
RGD |
PMID:20080492 |
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NCBI chr13:76,657,303...76,786,768
Ensembl chr13:76,657,367...76,786,765
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|
G |
Pkd1l1 |
polycystin 1 like 1, transient receptor potential channel interacting |
acts_upstream_of_or_within |
ISO |
MGI:4949891 (PMID:20080492) |
RGD |
PMID:20080492 |
|
NCBI chr14:83,552,964...83,670,062
Ensembl chr14:83,545,469...83,638,498
|
|
G |
Snai1 |
snail family transcriptional repressor 1 |
acts_upstream_of_or_within |
ISO |
MGI:2183156 (PMID:16801545) |
RGD |
PMID:16801545 |
|
NCBI chr 3:156,248,479...156,252,969
Ensembl chr 3:156,248,485...156,252,969
|
|
G |
Zic3 |
Zic family member 3 |
involved_in |
ISO |
MGI:5476827 (PMID:23184148), (PMID:23303524) |
RGD |
PMID:23184148 PMID:23303524 |
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NCBI chr X:136,123,662...136,129,627
Ensembl chr X:136,124,026...136,134,746
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|
|
G |
Ctnnb1 |
catenin beta 1 |
involved_in acts_upstream_of_or_within |
IEA ISO |
GO_REF:0000107 MGI:2148567|MGI:2148569 (PMID:19686689), (PMID:19805295) |
Ensembl RGD |
PMID:19686689 PMID:19805295 |
GO_REF:0000107 |
NCBI chr 8:120,640,008...120,667,110
Ensembl chr 8:120,639,995...120,667,111
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|
G |
Wnt2 |
Wnt family member 2 |
acts_upstream_of_or_within |
ISO |
MGI:1261834 (PMID:19686689) |
RGD |
PMID:19686689 |
|
NCBI chr 4:46,328,408...46,374,673
Ensembl chr 4:46,333,998...46,374,402
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|
G |
Wnt2b |
Wnt family member 2B |
acts_upstream_of_or_within |
ISO |
MGI:98954 (PMID:19686689) |
RGD |
PMID:19686689 |
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NCBI chr 2:192,454,226...192,468,599
Ensembl chr 2:192,453,824...192,470,308
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|
|
G |
Fgf10 |
fibroblast growth factor 10 |
acts_upstream_of_or_within |
ISO |
(PMID:15531758) |
RGD |
PMID:15531758 |
|
NCBI chr 2:50,801,171...50,878,218
Ensembl chr 2:50,800,992...50,876,866
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|
|
G |
Fgf10 |
fibroblast growth factor 10 |
acts_upstream_of_or_within |
ISO |
MGI:95729 (PMID:16720875) |
RGD |
PMID:16720875 |
|
NCBI chr 2:50,801,171...50,878,218
Ensembl chr 2:50,800,992...50,876,866
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|
G |
Gli3 |
GLI family zinc finger 3 |
acts_upstream_of_or_within |
ISO |
MGI:1099809 (PMID:16720875) |
RGD |
PMID:16720875 |
|
NCBI chr17:49,438,567...49,709,712
Ensembl chr17:49,438,567...49,709,712
|
|
G |
Pax3 |
paired box 3 |
acts_upstream_of_or_within |
ISO |
MGI:2687297 (PMID:16720875) |
RGD |
PMID:16720875 |
|
NCBI chr 9:79,567,455...79,664,042
Ensembl chr 9:79,568,634...79,664,042
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|
|
G |
Foxd1 |
forkhead box D1 |
involved_in |
ISS ISO IEA |
GO_REF:0000024 (PMID:15634693) GO_REF:0000107 |
UniProt RGD Ensembl |
PMID:15634693 |
GO_REF:0000024 GO_REF:0000107 |
NCBI chr 2:29,702,558...29,704,978
Ensembl chr 2:29,702,558...29,704,978
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|
|
G |
En1 |
engrailed homeobox 1 |
acts_upstream_of_or_within |
ISO |
MGI:1857163 (PMID:15607945) |
RGD |
PMID:15607945 |
|
NCBI chr13:31,750,892...31,756,477
Ensembl chr13:31,751,545...31,755,943
|
|
G |
Fgf8 |
fibroblast growth factor 8 |
acts_upstream_of_or_within |
ISO |
MGI:2150347 (PMID:17601531) |
RGD |
PMID:17601531 |
|
NCBI chr 1:244,584,477...244,590,578
Ensembl chr 1:244,584,652...244,590,359
|
|
G |
Gbx2 |
gastrulation brain homeobox 2 |
acts_upstream_of_or_within |
ISO |
MGI:1857634 (PMID:16651541) |
RGD |
PMID:16651541 |
|
NCBI chr 9:90,509,633...90,512,212
Ensembl chr 9:90,509,633...90,512,212
|
|
G |
Lrp6 |
LDL receptor related protein 6 |
acts_upstream_of_or_within |
ISO |
MGI:2156191 (PMID:11029008), (PMID:19795512) |
RGD |
PMID:11029008 PMID:19795512 |
|
NCBI chr 4:167,269,856...167,400,364
Ensembl chr 4:167,270,353...167,400,497
|
|
G |
Wnt1 |
Wnt family member 1 |
acts_upstream_of_or_within |
ISO |
MGI:1857490 (PMID:2205396) |
RGD |
PMID:2205396 |
|
NCBI chr 7:129,938,604...129,942,651
Ensembl chr 7:129,938,604...129,942,651
|
|
|
G |
Ssbp3 |
single stranded DNA binding protein 3 |
involved_in |
IEA ISO |
GO_REF:0000107 (PMID:15857913) |
Ensembl RGD |
PMID:15857913 |
GO_REF:0000107 |
NCBI chr 5:121,691,370...121,828,035
Ensembl chr 5:121,691,393...121,827,992
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|
|
G |
Wnt1 |
Wnt family member 1 |
acts_upstream_of_or_within |
ISO |
MGI:1856382 (PMID:8555108) |
RGD |
PMID:8555108 |
|
NCBI chr 7:129,938,604...129,942,651
Ensembl chr 7:129,938,604...129,942,651
|
|
|
G |
Gbx2 |
gastrulation brain homeobox 2 |
acts_upstream_of_or_within |
ISO |
MGI:1857634 (PMID:16651541) |
RGD |
PMID:16651541 |
|
NCBI chr 9:90,509,633...90,512,212
Ensembl chr 9:90,509,633...90,512,212
|
|
G |
Hes1 |
hes family bHLH transcription factor 1 |
involved_in acts_upstream_of_or_within |
IEA ISO |
GO_REF:0000107 MGI:104877 (PMID:11500373) |
Ensembl RGD |
PMID:11500373 |
GO_REF:0000107 |
NCBI chr11:70,705,763...70,708,176
Ensembl chr11:70,705,764...70,708,192
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|
G |
Hes3 |
hes family bHLH transcription factor 3 |
acts_upstream_of_or_within |
ISO |
MGI:104853 (PMID:11522634) |
RGD |
PMID:11522634 |
|
NCBI chr 5:162,793,611...162,799,578
Ensembl chr 5:162,794,367...162,796,261
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|
G |
Kdm2b |
lysine demethylase 2B |
involved_in |
ISO |
(PMID:21220025) |
RGD |
PMID:21220025 |
|
NCBI chr12:33,566,530...33,701,366
Ensembl chr12:33,574,657...33,701,355
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|
|
G |
Ddit3 |
DNA-damage inducible transcript 3 |
involved_in |
ISO IEA |
(PMID:16434966) GO_REF:0000107 |
RGD Ensembl |
PMID:16434966 |
GO_REF:0000107 |
NCBI chr 7:63,115,645...63,121,203
Ensembl chr 7:63,116,380...63,121,201
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|
G |
Sostdc1 |
sclerostin domain containing 1 |
involved_in |
ISO |
(PMID:15020244) |
RGD |
PMID:15020244 |
|
NCBI chr 6:53,051,336...53,055,510
Ensembl chr 6:53,051,354...53,055,579
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|
|
G |
Fuz |
fuzzy planar cell polarity protein |
involved_in |
ISS ISO |
GO_REF:0000024 (PMID:23806618) |
UniProt RGD |
PMID:23806618 |
GO_REF:0000024 |
NCBI chr 1:95,379,542...95,384,532
Ensembl chr 1:95,379,587...95,384,530
|
|
G |
Ofd1 |
Ofd1 centriole and centriolar satellite protein |
involved_in |
ISO |
(PMID:23806618) |
RGD |
PMID:23806618 |
|
NCBI chr X:28,015,347...28,056,115
Ensembl chr X:28,015,347...28,056,110
|
|
|
G |
Tbx2 |
T-box transcription factor 2 |
involved_in |
ISO |
(PMID:15042700) |
RGD |
PMID:15042700 |
|
NCBI chr10:70,679,670...70,688,868
Ensembl chr10:70,679,518...70,688,529
|
|
|
G |
Lfng |
LFNG O-fucosylpeptide 3-beta-N-acetylglucosaminyltransferase |
involved_in |
ISS ISO IEA |
GO_REF:0000024 (PMID:23072809) GO_REF:0000107 |
UniProt RGD Ensembl |
PMID:23072809 |
GO_REF:0000024 GO_REF:0000107 |
NCBI chr12:14,030,551...14,038,996
Ensembl chr12:14,018,333...14,039,008
|
|
|
G |
Gpr161 |
G protein-coupled receptor 161 |
involved_in |
ISO |
(PMID:23332756) |
RGD |
PMID:23332756 |
|
NCBI chr13:77,578,257...77,623,661
Ensembl chr13:77,577,739...77,619,613
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|
|
G |
Celsr2 |
cadherin, EGF LAG seven-pass G-type receptor 2 |
involved_in |
IEA ISO |
GO_REF:0000107 (PMID:12755329) |
Ensembl RGD |
PMID:12755329 |
GO_REF:0000107 |
NCBI chr 2:196,029,206...196,053,848
Ensembl chr 2:196,029,434...196,053,845
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|
G |
Nog |
noggin |
involved_in |
IEA ISO |
GO_REF:0000107 (PMID:8582276) |
Ensembl RGD |
PMID:8582276 |
GO_REF:0000107 |
NCBI chr10:74,128,712...74,130,339
Ensembl chr10:74,128,712...74,130,339
|
|
G |
Tbx18 |
T-box transcription factor 18 |
involved_in |
ISO |
(PMID:17584735) |
RGD |
PMID:17584735 |
|
NCBI chr 8:88,652,054...88,680,081
Ensembl chr 8:88,652,054...88,680,058
|
|
|
G |
Bmpr1a |
bone morphogenetic protein receptor type 1A |
acts_upstream_of_or_within |
ISO |
MGI:2158343 (PMID:16943278) |
RGD |
PMID:16943278 |
|
NCBI chr16:9,736,390...9,829,825
Ensembl chr16:9,736,630...9,780,616
|
|
|
G |
Arl13b |
ARF like GTPase 13B |
involved_in |
ISO |
(PMID:23014696) |
RGD |
PMID:23014696 |
|
NCBI chr11:150,100...217,103
Ensembl chr11:150,955...217,197
|
|
G |
Dzip1l |
DAZ interacting zinc finger protein 1-like |
involved_in acts_upstream_of_or_within |
IEA ISO |
GO_REF:0000107 MGI:2442827 (PMID:29487109) |
Ensembl RGD |
PMID:29487109 |
GO_REF:0000107 |
NCBI chr 8:100,188,414...100,229,077
Ensembl chr 8:100,194,999...100,228,988
|
|
G |
Ift140 |
intraflagellar transport 140 |
acts_upstream_of_or_within |
ISO |
MGI:4458412 (PMID:24009529) |
RGD |
PMID:24009529 |
|
NCBI chr10:14,032,665...14,121,682
Ensembl chr10:14,032,648...14,120,433
|
|
G |
Ptch1 |
patched 1 |
involved_in |
ISO |
(PMID:8681379) |
RGD |
PMID:8681379 |
|
NCBI chr17:1,542,705...1,607,730
Ensembl chr17:1,542,877...1,607,333
|
|
G |
Rpgrip1l |
Rpgrip1-like |
acts_upstream_of_or_within |
ISO |
MGI:3716208 (PMID:17553904) |
RGD |
PMID:17553904 |
|
NCBI chr19:15,692,189...15,785,083
Ensembl chr19:15,692,150...15,785,083
|
|
G |
Tbc1d32 |
TBC1 domain family, member 32 |
acts_upstream_of_or_within |
ISO |
MGI:1919757 (PMID:29487109) |
RGD |
PMID:29487109 |
|
NCBI chr20:35,359,865...35,590,992
Ensembl chr20:35,359,863...35,590,415
|
|
G |
Tmem107 |
transmembrane protein 107 |
involved_in |
ISO |
(PMID:22698544) |
RGD |
PMID:22698544 |
|
NCBI chr10:53,772,153...53,774,685
Ensembl chr10:53,771,784...53,774,676
|
|
G |
Traf3ip1 |
TRAF3 interacting protein 1 |
acts_upstream_of_or_within |
ISO |
MGI:4129326 (PMID:21945076) |
RGD |
PMID:21945076 |
|
NCBI chr 9:92,073,622...92,110,427
Ensembl chr 9:92,073,640...92,108,977
|
|
|
G |
Bmp4 |
bone morphogenetic protein 4 |
acts_upstream_of_or_within |
ISO |
MGI:1857137 (PMID:9806931) |
RGD |
PMID:9806931 |
|
NCBI chr15:19,618,538...19,633,494
Ensembl chr15:19,618,542...19,623,306
|
|
G |
Fgf1 |
fibroblast growth factor 1 |
acts_upstream_of_or_within |
ISO |
(PMID:15576401) |
RGD |
PMID:15576401 |
|
NCBI chr18:30,686,555...30,772,667
Ensembl chr18:30,686,581...30,772,357
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|
G |
Fgf10 |
fibroblast growth factor 10 |
acts_upstream_of_or_within |
IDA ISO |
PMID:10964474 MGI:95517 (PMID:12810586) |
RGD |
PMID:12810586 PMID:10964474 |
RGD:8554722 |
NCBI chr 2:50,801,171...50,878,218
Ensembl chr 2:50,800,992...50,876,866
|
|
G |
Fgf2 |
fibroblast growth factor 2 |
acts_upstream_of_or_within |
ISO |
(PMID:15576401) |
RGD |
PMID:15576401 |
|
NCBI chr 2:120,236,328...120,290,673
Ensembl chr 2:120,236,328...120,291,221
|
|
G |
Fgf3 |
fibroblast growth factor 3 |
acts_upstream_of_or_within |
ISO |
MGI:1099809|MGI:99604 (PMID:12810586), (PMID:15741321) |
RGD |
PMID:12810586 PMID:15741321 |
|
NCBI chr 1:200,001,162...200,005,539
Ensembl chr 1:200,001,261...200,005,187
|
|
G |
Fgf8 |
fibroblast growth factor 8 |
acts_upstream_of_or_within |
ISO |
MGI:95517 (PMID:15741321) |
RGD |
PMID:15741321 |
|
NCBI chr 1:244,584,477...244,590,578
Ensembl chr 1:244,584,652...244,590,359
|
|
G |
Fgfr1 |
Fibroblast growth factor receptor 1 |
acts_upstream_of_or_within |
ISO |
(PMID:15576401) |
RGD |
PMID:15576401 |
|
NCBI chr16:66,491,930...66,547,161
Ensembl chr16:66,494,042...66,547,350
|
|
G |
Fgfr4 |
fibroblast growth factor receptor 4 |
acts_upstream_of_or_within |
ISO |
(PMID:15576401) |
RGD |
PMID:15576401 |
|
NCBI chr17:9,461,541...9,476,268
Ensembl chr17:9,461,547...9,476,242
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|
G |
Frs2 |
fibroblast growth factor receptor substrate 2 |
acts_upstream_of_or_within |
ISO |
MGI:3521833 (PMID:15569927) |
RGD |
PMID:15569927 |
|
NCBI chr 7:52,711,255...52,792,738
Ensembl chr 7:52,711,257...52,792,743
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|
G |
Gdnf |
glial cell derived neurotrophic factor |
involved_in acts_upstream_of_or_within |
IEA ISO |
GO_REF:0000107 MGI:1345139 (PMID:15691764) |
Ensembl RGD |
PMID:15691764 |
GO_REF:0000107 |
NCBI chr 2:56,894,022...56,919,935
Ensembl chr 2:56,895,010...56,917,209
|
|
G |
Hoxa11 |
homeobox A11 |
acts_upstream_of_or_within |
ISO |
MGI:96193|MGI:96203 (PMID:12050119) |
RGD |
PMID:12050119 |
|
NCBI chr 4:81,342,527...81,346,189
Ensembl chr 4:81,342,528...81,346,232
|
|
G |
Hoxc11 |
homeobox C11 |
acts_upstream_of_or_within |
ISO |
MGI:96172|MGI:96203 (PMID:12050119) |
RGD |
PMID:12050119 |
|
NCBI chr 7:134,091,224...134,094,738
Ensembl chr 7:134,091,552...134,094,738
|
|
G |
Hoxd11 |
homeobox D11 |
acts_upstream_of_or_within |
ISO |
MGI:96172|MGI:96193 (PMID:12050119) |
RGD |
PMID:12050119 |
|
NCBI chr 3:59,584,840...59,587,257
Ensembl chr 3:59,585,039...59,586,783
|
|
G |
Six1 |
SIX homeobox 1 |
acts_upstream_of_or_within |
ISO |
MGI:2655195 (PMID:12783782) |
RGD |
PMID:12783782 |
|
NCBI chr 6:91,746,739...91,751,975
Ensembl chr 6:91,746,739...91,751,975
|
|
G |
Spry1 |
sprouty RTK signaling antagonist 1 |
acts_upstream_of_or_within |
ISO |
MGI:3574404 (PMID:15691764) |
RGD |
PMID:15691764 |
|
NCBI chr 2:120,557,256...120,561,917
Ensembl chr 2:120,556,706...120,566,189
|
|
|
G |
Pld6 |
phospholipase D family, member 6 |
involved_in |
ISO |
(PMID:21397848) |
RGD |
PMID:21397848 |
|
NCBI chr10:44,578,536...44,581,187
Ensembl chr10:44,577,675...44,581,077
|
|
G |
Tdrd1 |
tudor domain containing 1 |
involved_in |
IBA |
GO_REF:0000033 |
GO_Central |
|
GO_REF:0000033 |
NCBI chr 1:255,871,939...255,919,222
Ensembl chr 1:255,875,887...255,915,871
|
|
G |
Tdrd5 |
tudor domain containing 5 |
involved_in |
IEA ISO ISS |
GO_REF:0000107 (PMID:21383078) GO_REF:0000024 |
Ensembl RGD UniProt |
PMID:21383078 |
GO_REF:0000024 GO_REF:0000107 |
NCBI chr13:68,394,180...68,447,745
Ensembl chr13:68,394,061...68,441,319
|
|
G |
Tdrd6 |
tudor domain containing 6 |
involved_in |
IBA |
GO_REF:0000033 |
GO_Central |
|
GO_REF:0000033 |
NCBI chr 9:17,344,033...17,359,348
Ensembl chr 9:17,344,026...17,359,344
|
|
G |
Tdrd7 |
tudor domain containing 7 |
involved_in |
IBA |
GO_REF:0000033 |
GO_Central |
|
GO_REF:0000033 |
NCBI chr 5:60,238,742...60,312,548
Ensembl chr 5:60,238,678...60,312,544
|
|
G |
Tdrkh |
tudor and KH domain containing |
involved_in |
IBA |
GO_REF:0000033 |
GO_Central |
|
GO_REF:0000033 |
NCBI chr 2:182,049,175...182,071,516
Ensembl chr 2:182,049,215...182,070,755
|
|
|
G |
Shh |
sonic hedgehog signaling molecule |
involved_in |
IEA ISO ISS |
GO_REF:0000107 (PMID:11044396) GO_REF:0000024 |
Ensembl RGD UniProt |
PMID:11044396 |
GO_REF:0000024 GO_REF:0000107 |
NCBI chr 4:6,954,017...6,963,170
Ensembl chr 4:6,954,017...6,963,170
|
|
G |
Wnt8a |
Wnt family member 8A |
acts_upstream_of_or_within |
ISO |
(PMID:16256739) |
RGD |
PMID:16256739 |
|
NCBI chr18:26,137,690...26,143,283
Ensembl chr18:26,137,690...26,143,283
|
|
|
G |
Nodal |
nodal growth differentiation factor |
acts_upstream_of_or_within |
ISO |
(PMID:14511481) |
RGD |
PMID:14511481 |
|
NCBI chr20:29,368,436...29,376,837
Ensembl chr20:29,368,436...29,376,837
|
|
G |
Wnt8a |
Wnt family member 8A |
acts_upstream_of_or_within |
ISO |
(PMID:16256739) |
RGD |
PMID:16256739 |
|
NCBI chr18:26,137,690...26,143,283
Ensembl chr18:26,137,690...26,143,283
|
|
|
G |
Acvr1 |
activin A receptor type 1 |
involved_in |
ISO IEA |
(PMID:19506109) GO_REF:0000107 |
RGD Ensembl |
PMID:19506109 |
GO_REF:0000107 |
NCBI chr 3:42,978,558...43,097,892
Ensembl chr 3:42,978,561...43,098,241
|
|
G |
Ctnnb1 |
catenin beta 1 |
involved_in acts_upstream_of_or_within |
IEA ISO |
GO_REF:0000107 (PMID:18316368) |
Ensembl RGD |
PMID:18316368 |
GO_REF:0000107 |
NCBI chr 8:120,640,008...120,667,110
Ensembl chr 8:120,639,995...120,667,111
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G |
Mapk8 |
mitogen-activated protein kinase 8 |
acts_upstream_of_or_within |
ISO |
(PMID:18316368) |
RGD |
PMID:18316368 |
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NCBI chr16:8,638,897...8,721,960
Ensembl chr16:8,638,924...8,721,981
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G |
Mef2c |
myocyte enhancer factor 2C |
involved_in |
ISS ISO |
GO_REF:0000024 (PMID:16680724) |
UniProt RGD |
PMID:16680724 |
GO_REF:0000024 |
NCBI chr 2:13,973,299...14,136,065
Ensembl chr 2:13,993,438...14,132,880
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G |
Wnt11 |
Wnt family member 11 |
involved_in |
ISO |
UniProtKB:P22725 (PMID:22569553) |
RGD |
PMID:22569553 |
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NCBI chr 1:153,134,503...153,154,294
Ensembl chr 1:153,138,197...153,154,294
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G |
Wnt5a |
Wnt family member 5A |
involved_in |
IEA ISO |
GO_REF:0000107 UniProtKB:P48615 (PMID:22569553) |
Ensembl RGD |
PMID:22569553 |
GO_REF:0000107 |
NCBI chr16:3,697,032...3,718,230
Ensembl chr16:3,697,032...3,718,234
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G |
Ets2 |
ETS proto-oncogene 2, transcription factor |
acts_upstream_of_or_within |
ISO |
MGI:1891557 (PMID:23552073) |
RGD |
PMID:23552073 |
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NCBI chr11:35,021,536...35,038,322
Ensembl chr11:35,021,596...35,038,319
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G |
Foxa2 |
forkhead box A2 |
involved_in acts_upstream_of_or_within |
ISS ISO |
GO_REF:0000024 (PMID:11291865) MGI:1857725 (PMID:11291865) |
UniProt RGD |
PMID:11291865 |
GO_REF:0000024 |
NCBI chr 3:135,470,123...135,474,326
Ensembl chr 3:135,470,131...135,474,326
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G |
Gdf3 |
growth differentiation factor 3 |
acts_upstream_of_or_within |
ISO |
MGI:3612535 (PMID:16368929) |
RGD |
PMID:16368929 |
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NCBI chr 4:155,831,572...155,835,953
Ensembl chr 4:155,830,909...155,835,937
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G |
Hhex |
hematopoietically expressed homeobox |
acts_upstream_of_or_within |
ISO |
MGI:4999724|MGI:97359 (PMID:21445260) |
RGD |
PMID:21445260 |
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NCBI chr 1:235,190,455...235,196,042
Ensembl chr 1:235,190,455...235,196,042
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G |
Lhx1 |
LIM homeobox 1 |
involved_in acts_upstream_of_or_within |
ISS ISO |
GO_REF:0000024 (PMID:11291865) MGI:1857502|MGI:1857848 (PMID:11291865) |
UniProt RGD |
PMID:11291865 |
GO_REF:0000024 |
NCBI chr10:69,396,829...69,403,617
Ensembl chr10:69,396,829...69,403,617
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G |
Lrp6 |
LDL receptor related protein 6 |
acts_upstream_of_or_within |
ISO |
MGI:98958 (PMID:19795512) |
RGD |
PMID:19795512 |
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NCBI chr 4:167,269,856...167,400,364
Ensembl chr 4:167,270,353...167,400,497
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G |
Nodal |
nodal growth differentiation factor |
acts_upstream_of_or_within |
ISO |
MGI:96086 (PMID:21445260) |
RGD |
PMID:21445260 |
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NCBI chr20:29,368,436...29,376,837
Ensembl chr20:29,368,436...29,376,837
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G |
Otx2 |
orthodenticle homeobox 2 |
acts_upstream_of_or_within involved_in |
ISO |
MGI:1857502 (PMID:11291865) |
RGD |
PMID:11291865 |
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NCBI chr15:21,942,233...21,953,034
Ensembl chr15:21,943,191...21,953,416
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G |
Prickle1 |
prickle planar cell polarity protein 1 |
involved_in |
IEA ISO |
GO_REF:0000107 MGI:4356107 (PMID:19706528) |
Ensembl RGD |
PMID:19706528 |
GO_REF:0000107 |
NCBI chr 7:124,639,142...124,735,027
Ensembl chr 7:124,639,142...124,658,113
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G |
Srf |
serum response factor |
acts_upstream_of_or_within |
ISO |
MGI:2158696 (PMID:9799237) |
RGD |
PMID:9799237 |
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NCBI chr 9:14,426,453...14,435,734
Ensembl chr 9:14,426,472...14,435,733
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G |
Wnt5a |
Wnt family member 5A |
involved_in acts_upstream_of_or_within |
IEA ISO |
GO_REF:0000107 MGI:1298218 (PMID:19795512) |
Ensembl RGD |
PMID:19795512 |
GO_REF:0000107 |
NCBI chr16:3,697,032...3,718,230
Ensembl chr16:3,697,032...3,718,234
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G |
Zic3 |
Zic family member 3 |
involved_in |
ISO |
MGI:2180720 (PMID:16397896) |
RGD |
PMID:16397896 |
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NCBI chr X:136,123,662...136,129,627
Ensembl chr X:136,124,026...136,134,746
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G |
Pax2 |
paired box 2 |
involved_in |
ISS ISO |
GO_REF:0000024 (PMID:12435636) |
UniProt RGD |
PMID:12435636 |
GO_REF:0000024 |
NCBI chr 1:243,616,509...243,697,454
Ensembl chr 1:243,616,606...243,695,321
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G |
Pax8 |
paired box 8 |
involved_in |
ISS ISO |
GO_REF:0000024 (PMID:12435636) |
UniProt RGD |
PMID:12435636 |
GO_REF:0000024 |
NCBI chr 3:7,185,721...7,242,363
Ensembl chr 3:7,185,723...7,242,363
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G |
Ar |
androgen receptor |
acts_upstream_of_or_within involved_in |
ISO IEA |
MGI:3716756 (PMID:17317769) GO_REF:0000107 |
RGD Ensembl |
PMID:17317769 |
GO_REF:0000107 |
NCBI chr X:63,104,771...63,273,934
Ensembl chr X:63,104,771...63,273,925
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G |
Six3 |
SIX homeobox 3 |
involved_in |
ISO |
(PMID:12163408) |
RGD |
PMID:12163408 |
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NCBI chr 6:9,039,017...9,043,336
Ensembl chr 6:9,036,434...9,053,301
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G |
Aldh1a2 |
aldehyde dehydrogenase 1 family, member A2 |
acts_upstream_of_or_within |
ISO |
MGI:2180721 (PMID:14623241), (PMID:15069081) |
RGD |
PMID:14623241 PMID:15069081 |
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NCBI chr 8:71,877,850...71,957,107
Ensembl chr 8:71,877,850...71,957,107
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G |
Apc |
APC regulator of WNT signaling pathway |
acts_upstream_of_or_within |
ISO |
MGI:1856318 (PMID:16887818) |
RGD |
PMID:16887818 |
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NCBI chr18:25,828,558...25,925,511
Ensembl chr18:25,864,222...25,922,696
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G |
Chsy1 |
chondroitin sulfate synthase 1 |
acts_upstream_of_or_within |
ISO |
MGI:5007063 (PMID:22280990) |
RGD |
PMID:22280990 |
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NCBI chr 1:119,689,626...119,750,711
Ensembl chr 1:119,686,350...119,750,601
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G |
Ctnnb1 |
catenin beta 1 |
involved_in acts_upstream_of_or_within |
IEA ISO |
GO_REF:0000107 MGI:2148594 (PMID:12885771) |
Ensembl RGD |
PMID:12885771 |
GO_REF:0000107 |
NCBI chr 8:120,640,008...120,667,110
Ensembl chr 8:120,639,995...120,667,111
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G |
Cyp26b1 |
cytochrome P450, family 26, subfamily b, polypeptide 1 |
acts_upstream_of_or_within |
ISO |
MGI:3039046 (PMID:15030763) |
RGD |
PMID:15030763 |
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NCBI chr 4:117,041,808...117,058,628
Ensembl chr 4:117,041,808...117,058,628
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G |
Dll1 |
delta like canonical Notch ligand 1 |
involved_in |
IEA ISO ISS |
GO_REF:0000107 (PMID:22529374) GO_REF:0000024 |
Ensembl RGD UniProt |
PMID:22529374 |
GO_REF:0000024 GO_REF:0000107 |
NCBI chr 1:56,312,062...56,320,177
Ensembl chr 1:56,312,066...56,320,179
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G |
Dlx1 |
distal-less homeobox 1 |
involved_in acts_upstream_of_or_within |
IEA ISO |
GO_REF:0000107 MGI:1857826|MGI:94902 (PMID:9187081) |
Ensembl RGD |
PMID:9187081 |
GO_REF:0000107 |
NCBI chr 3:56,356,190...56,360,780
Ensembl chr 3:56,356,190...56,360,780
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G |
Dlx2 |
distal-less homeobox 2 |
involved_in acts_upstream_of_or_within |
IEA ISO |
GO_REF:0000107 MGI:1857828|MGI:94901 (PMID:9187081) |
Ensembl RGD |
PMID:9187081 |
GO_REF:0000107 |
NCBI chr 3:56,370,238...56,373,581
Ensembl chr 3:56,370,483...56,373,597
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G |
En1 |
engrailed homeobox 1 |
acts_upstream_of_or_within |
ISO |
MGI:1857163 (PMID:8684466), (PMID:9362463) |
RGD |
PMID:8684466 PMID:9362463 |
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NCBI chr13:31,750,892...31,756,477
Ensembl chr13:31,751,545...31,755,943
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G |
Gli1 |
GLI family zinc finger 1 |
acts_upstream_of_or_within |
ISO |
MGI:95728 (PMID:16342201) |
RGD |
PMID:16342201 |
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NCBI chr 7:63,156,926...63,169,579
Ensembl chr 7:63,156,926...63,169,251
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G |
Gli2 |
GLI family zinc finger 2 |
acts_upstream_of_or_within |
ISO |
MGI:95727|MGI:95729 (PMID:16342201) |
RGD |
PMID:16342201 |
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NCBI chr13:29,946,882...30,163,589
Ensembl chr13:29,946,809...30,163,574
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G |
Gli3 |
GLI family zinc finger 3 |
acts_upstream_of_or_within |
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