ONTOLOGY REPORT - ANNOTATIONS
Term: immune system development
Accession: GO:0002520
browse the term
Definition: The process whose specific outcome is the progression of an organismal system whose objective is to provide calibrated responses by an organism to a potential internal or invasive threat, over time, from its formation to the mature structure. A system is a regularly interacting or interdependent group of organs or tissues that work together to carry out a given biological process.
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Bcl2
BCL2 apoptosis regulator
involved_in acts_upstream_of_or_within
IEA ISO
(PMID:7812968) (PMID:8372353)
Ensembl MGI
PMID:7812968 PMID:8372353
GO_REF:0000107
NCBI chrNW_004936497:2,209,136...2,373,580
Ensembl chrNW_004936497:2,210,334...2,210,921
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Cacna1c
calcium voltage-gated channel subunit alpha1 C
involved_in
IEA
Ensembl
GO_REF:0000107
NCBI chrNW_004936606:2,168,104...2,867,560
Ensembl chrNW_004936606:2,168,625...2,865,758
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Gata3
GATA binding protein 3
involved_in
IEA
TreeGrafter
GO_REF:0000118
NCBI chrNW_004936484:6,780,692...6,800,883
Ensembl chrNW_004936484:6,780,692...6,800,966
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Ro60
Ro60, Y RNA binding protein
involved_in acts_upstream_of_or_within
IEA ISO
(PMID:12788971)
Ensembl MGI
PMID:12788971
GO_REF:0000107
NCBI chrNW_004936638:1,289,452...1,320,522
Ensembl chrNW_004936638:1,304,048...1,317,948
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Smad3
SMAD family member 3
involved_in acts_upstream_of_or_within
IEA ISO
(PMID:15183723)
Ensembl MGI
PMID:15183723
GO_REF:0000107
NCBI chrNW_004936471:27,080,662...27,185,861
Ensembl chrNW_004936471:27,080,575...27,189,793
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Asxl1
ASXL transcriptional regulator 1
involved_in acts_upstream_of_or_within
IEA ISO
(PMID:19861679)
Ensembl MGI
PMID:19861679
GO_REF:0000107
NCBI chrNW_004936485:19,218,494...19,297,188
Ensembl chrNW_004936485:19,227,400...19,298,912
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Ctc1
CST telomere replication complex component 1
involved_in acts_upstream_of_or_within
IEA ISO
(PMID:22531781)
Ensembl MGI
PMID:22531781
GO_REF:0000107
NCBI chrNW_004936595:1,456,911...1,476,331
Ensembl chrNW_004936595:1,454,508...1,476,593
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Fancb
FA complementation group B
acts_upstream_of_or_within
ISO
(PMID:26658157)
MGI
PMID:26658157
NCBI chrNW_004936470:4,305,220...4,323,456
Ensembl chrNW_004936470:4,305,740...4,323,374
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Hoxb4
homeobox B4
involved_in acts_upstream_of_or_within
IEA ISO
(PMID:14962901)
Ensembl MGI
PMID:14962901
GO_REF:0000107
NCBI chrNW_004936490:12,808,679...12,811,688
Ensembl chrNW_004936490:12,808,679...12,811,688
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LOC101960702
lysosomal acid lipase/cholesteryl ester hydrolase
involved_in
IEA
Ensembl
GO_REF:0000107
NCBI chrNW_004936601:4,975,296...5,008,938
Ensembl chrNW_004936601:4,975,211...5,008,962
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Lrp5
LDL receptor related protein 5
involved_in
IEA
Ensembl
GO_REF:0000107
NCBI chrNW_004936599:1,746,309...1,814,471
Ensembl chrNW_004936599:1,746,406...1,814,321
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Lrrc17
leucine rich repeat containing 17
involved_in
IEA
Ensembl
GO_REF:0000107
NCBI chrNW_004936479:20,392,485...20,423,209
Ensembl chrNW_004936479:20,392,523...20,423,281
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Ptprc
protein tyrosine phosphatase receptor type C
involved_in
IEA
Ensembl
GO_REF:0000107
NCBI chrNW_004936567:5,266,653...5,378,464
Ensembl chrNW_004936567:5,267,615...5,378,258
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Sbds
SBDS ribosome maturation factor
involved_in
ISO
(PMID:15342903)
UniProt
PMID:15342903
NCBI chrNW_004936543:7,324,748...7,329,774
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Tp53
tumor protein p53
involved_in
IEA
Ensembl
GO_REF:0000107
NCBI chrNW_004936595:919,807...935,367
Ensembl chrNW_004936595:919,428...925,425
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Foxj1
forkhead box J1
involved_in
IEA
Ensembl
GO_REF:0000107
NCBI chrNW_004936594:1,284,799...1,288,898
Ensembl chrNW_004936594:1,284,781...1,289,361
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Aire
autoimmune regulator
involved_in
IEA
Ensembl
GO_REF:0000107
NCBI chrNW_004936500:125,589...137,071
Ensembl chrNW_004936500:125,795...137,056
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Asxl1
ASXL transcriptional regulator 1
acts_upstream_of_or_within involved_in
ISO IEA
(PMID:19861679)
MGI Ensembl
PMID:19861679
GO_REF:0000107
NCBI chrNW_004936485:19,218,494...19,297,188
Ensembl chrNW_004936485:19,227,400...19,298,912
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Ltbr
lymphotoxin beta receptor
involved_in
IEA
InterPro
GO_REF:0000002
NCBI chrNW_004936709:1,362,846...1,369,287
Ensembl chrNW_004936709:1,362,840...1,369,365
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Polb
DNA polymerase beta
involved_in acts_upstream_of_or_within
IEA ISO
(PMID:24388753)
Ensembl MGI
PMID:24388753
GO_REF:0000107
NCBI chrNW_004936785:324,655...350,496
Ensembl chrNW_004936785:323,941...350,539
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Yy1
YY1 transcription factor
involved_in
ISO
(PMID:23531880)
MGI
PMID:23531880
NCBI chrNW_004936604:3,911,407...3,945,405
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Cyren
cell cycle regulator of NHEJ
involved_in
IEA
Ensembl
GO_REF:0000107
NCBI chrNW_004936579:768,153...776,053
Ensembl chrNW_004936579:768,252...770,440
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Foxp1
forkhead box P1
acts_upstream_of_or_within
ISO
(PMID:16819554)
MGI
PMID:16819554
NCBI chrNW_004936603:2,631,781...3,146,104
Ensembl chrNW_004936603:2,632,274...2,830,324
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Lig4
DNA ligase 4
involved_in acts_upstream_of_or_within
IEA ISO
(PMID:9823897)
Ensembl MGI TreeGrafter
PMID:9823897
GO_REF:0000107 GO_REF:0000118
NCBI chrNW_004936472:3,861,833...3,867,943
Ensembl chrNW_004936472:3,861,866...3,867,933
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Nhej1
non-homologous end joining factor 1
involved_in
IEA
Ensembl
GO_REF:0000107
NCBI chrNW_004936569:1,494,783...1,578,587
Ensembl chrNW_004936569:1,495,446...1,578,590
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Prkdc
protein kinase, DNA-activated, catalytic subunit
involved_in acts_upstream_of_or_within
IEA ISO
(PMID:9768755)
TreeGrafter MGI Ensembl
PMID:9768755
GO_REF:0000107 GO_REF:0000118
NCBI chrNW_004936590:4,722,914...4,887,615
Ensembl chrNW_004936590:4,722,873...4,890,156
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Tcf3
transcription factor 3
acts_upstream_of_or_within involved_in
ISO IEA
(PMID:16428437)
MGI Ensembl TreeGrafter
PMID:16428437
GO_REF:0000107 GO_REF:0000118
NCBI chrNW_004936588:884,817...913,052
Ensembl chrNW_004936588:884,789...912,753
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Xrcc4
X-ray repair cross complementing 4
involved_in acts_upstream_of_or_within
IEA ISO
(PMID:9875844)
TreeGrafter MGI
PMID:9875844
GO_REF:0000118
NCBI chrNW_004936469:2,248,367...2,495,215
Ensembl chrNW_004936469:2,248,039...2,495,226
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Aicda
activation induced cytidine deaminase
acts_upstream_of_or_within involved_in
ISO IEA
(PMID:17713479)
MGI Ensembl
PMID:17713479
GO_REF:0000107
NCBI chrNW_004936870:25,039...34,601
Ensembl chrNW_004936870:25,039...34,601
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Atad5
ATPase family AAA domain containing 5
involved_in acts_upstream_of
IEA ISO
(PMID:25404367)
Ensembl MGI
PMID:25404367
GO_REF:0000107
NCBI chrNW_004936538:2,815,370...2,877,084
Ensembl chrNW_004936538:2,811,174...2,874,113
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Batf
basic leucine zipper ATF-like transcription factor
involved_in
IEA
Ensembl
GO_REF:0000107
NCBI chrNW_004936488:4,607,716...4,631,237
Ensembl chrNW_004936488:4,607,716...4,631,283
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Cd40lg
CD40 ligand
involved_in
IEA
Ensembl
GO_REF:0000107
NCBI chrNW_004936513:10,607,617...10,620,403
Ensembl chrNW_004936513:10,607,617...10,620,403
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Ercc1
ERCC excision repair 1, endonuclease non-catalytic subunit
acts_upstream_of_or_within involved_in
ISO IEA
(PMID:15280420)
MGI Ensembl
PMID:15280420
GO_REF:0000107
NCBI chrNW_004936706:1,854,938...1,867,521
Ensembl chrNW_004936706:1,852,359...1,867,745
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Exo1
exonuclease 1
acts_upstream_of_or_within
ISO
(PMID:14716311)
MGI
PMID:14716311
NCBI chrNW_004936526:8,570,488...8,627,004
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Exosc3
exosome component 3
involved_in
IEA
Ensembl
GO_REF:0000107
NCBI chrNW_004936524:5,580,855...5,586,170
Ensembl chrNW_004936524:5,581,090...5,586,128
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Exosc6
exosome component 6
involved_in
IEA
Ensembl
GO_REF:0000107
NCBI chrNW_004936475:23,295,441...23,297,321
Ensembl chrNW_004936475:23,295,500...23,296,318
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Lig4
DNA ligase 4
involved_in acts_upstream_of_or_within
IEA ISO
(PMID:17713479)
Ensembl MGI
PMID:17713479
GO_REF:0000107
NCBI chrNW_004936472:3,861,833...3,867,943
Ensembl chrNW_004936472:3,861,866...3,867,933
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Mlh1
mutL homolog 1
involved_in acts_upstream_of_or_within
IEA ISO
(PMID:12743174)
Ensembl MGI
PMID:12743174
GO_REF:0000107
NCBI chrNW_004936473:26,556,636...26,600,830
Ensembl chrNW_004936473:26,556,611...26,603,736
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Msh2
mutS homolog 2
involved_in acts_upstream_of_or_within
IEA ISO
(PMID:12743174) (PMID:10430621)
Ensembl MGI
PMID:10430621 PMID:12743174
GO_REF:0000107
NCBI chrNW_004936508:4,943,987...5,013,356
Ensembl chrNW_004936508:4,944,007...5,013,356
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Msh6
mutS homolog 6
acts_upstream_of_or_within involved_in
ISO IEA
(PMID:16618598) (PMID:17015724)
MGI Ensembl
PMID:16618598 PMID:17015724
GO_REF:0000107
NCBI chrNW_004936508:4,708,661...4,728,671
Ensembl chrNW_004936508:4,708,661...4,728,787
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Nbn
nibrin
involved_in
IEA
Ensembl
GO_REF:0000107
NCBI chrNW_004936544:3,773,828...3,812,673
Ensembl chrNW_004936544:3,775,220...3,808,837
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Nfkbiz
NFKB inhibitor zeta
involved_in
IEA
Ensembl
GO_REF:0000107
NCBI chrNW_004936630:1,601,006...1,633,844
Ensembl chrNW_004936630:1,601,010...1,632,745
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Pcyt1a
phosphate cytidylyltransferase 1A, choline
involved_in
IEA
Ensembl
GO_REF:0000107
NCBI chrNW_004936784:884,751...938,901
Ensembl chrNW_004936784:884,751...938,282
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Rnf168
ring finger protein 168
involved_in
ISO
(PMID:20080757)
UniProt
PMID:20080757
NCBI chrNW_004936784:1,073,236...1,094,575
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Rnf8
ring finger protein 8
involved_in
ISO
(PMID:20080757)
UniProt
PMID:20080757
NCBI chrNW_004936476:22,074,146...22,121,286
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Sanbr
SANT and BTB domain regulator of CSR
involved_in
IEA
Ensembl
GO_REF:0000107
NCBI chrNW_004936491:6,578,538...6,629,610
Ensembl chrNW_004936491:6,578,484...6,630,513
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Swap70
switching B cell complex subunit SWAP70
acts_upstream_of_or_within involved_in
ISO IEA
(PMID:9642267)
MGI Ensembl
PMID:9642267
GO_REF:0000107
NCBI chrNW_004936528:8,441,839...8,511,374
Ensembl chrNW_004936528:8,441,527...8,511,376
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Ung
uracil DNA glycosylase
involved_in acts_upstream_of_or_within
IEA ISO
(PMID:17015724)
Ensembl MGI
PMID:17015724
GO_REF:0000107
NCBI chrNW_004936769:911,296...922,770
Ensembl chrNW_004936769:910,838...922,726
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Xrcc4
X-ray repair cross complementing 4
acts_upstream_of_or_within
ISO
(PMID:17713479)
MGI
PMID:17713479
NCBI chrNW_004936469:2,248,367...2,495,215
Ensembl chrNW_004936469:2,248,039...2,495,226
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Ccr6
C-C motif chemokine receptor 6
involved_in
IEA
Ensembl
GO_REF:0000107
NCBI chrNW_004936489:16,669,297...16,689,451
Ensembl chrNW_004936489:16,669,297...16,689,451
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Bcl6
BCL6 transcription repressor
involved_in acts_upstream_of
IEA ISO
(PMID:10490661)
Ensembl MGI
PMID:10490661
GO_REF:0000107
NCBI chrNW_004936578:2,371,976...2,395,034
Ensembl chrNW_004936578:2,371,945...2,395,071
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Foxp3
forkhead box P3
involved_in acts_upstream_of
IEA ISO
(PMID:16275384)
Ensembl MGI
PMID:16275384
GO_REF:0000107
NCBI chrNW_004936721:1,118,376...1,125,282
Ensembl chrNW_004936721:1,118,782...1,132,308
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Stat6
signal transducer and activator of transcription 6
involved_in acts_upstream_of
IEA ISO
(PMID:10490661)
Ensembl MGI
PMID:10490661
GO_REF:0000107
NCBI chrNW_004936646:1,297,530...1,312,508
Ensembl chrNW_004936646:1,296,290...1,312,157
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Hspd1
heat shock protein family D (Hsp60) member 1
involved_in
ISO
(PMID:16148103)
BHF-UCL
PMID:16148103
NCBI chrNW_004936506:1,678,069...1,687,632
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Ccl21
C-C motif chemokine ligand 21
acts_upstream_of_or_within
ISO
(PMID:12732660)
MGI
PMID:12732660
NCBI chrNW_004936524:2,787,963...2,789,116
Ensembl chrNW_004936524:2,788,341...2,789,016
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Cd248
CD248 molecule
acts_upstream_of_or_within
ISO
(PMID:20432232)
MGI
PMID:20432232
NCBI chrNW_004936599:3,284,695...3,287,022
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Cd2ap
CD2 associated protein
involved_in acts_upstream_of_or_within
IEA ISO
(PMID:24218450)
Ensembl MGI
PMID:24218450
GO_REF:0000107
NCBI chrNW_004936476:12,890,595...12,989,046
Ensembl chrNW_004936476:12,890,468...12,987,843
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Cxcl13
C-X-C motif chemokine ligand 13
acts_upstream_of_or_within involved_in
ISO
(PMID:12732660) (PMID:19783990)
MGI BHF-UCL
PMID:12732660 PMID:19783990
NCBI chrNW_004936676:1,309,625...1,314,532
Ensembl chrNW_004936676:1,309,625...1,313,933
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Cxcr5
C-X-C motif chemokine receptor 5
involved_in acts_upstream_of_or_within
IEA ISO
(PMID:12732660)
InterPro MGI Ensembl
PMID:12732660
GO_REF:0000002 GO_REF:0000107
NCBI chrNW_004936542:3,860,536...3,872,528
Ensembl chrNW_004936542:3,860,536...3,872,116
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Fadd
Fas associated via death domain
involved_in
IEA
Ensembl
GO_REF:0000107
NCBI chrNW_004936599:633,501...639,412
Ensembl chrNW_004936599:633,330...639,456
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Flt3
fms related receptor tyrosine kinase 3
acts_upstream_of_or_within
ISO
(PMID:20457904)
MGI
PMID:20457904
NCBI chrNW_004936472:23,169,967...23,239,178
Ensembl chrNW_004936472:23,170,470...23,256,904
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Ikzf1
IKAROS family zinc finger 1
acts_upstream_of_or_within
ISO
(PMID:7923373)
MGI
PMID:7923373
NCBI chrNW_004936686:1,459,582...1,556,478
Ensembl chrNW_004936686:1,462,145...1,556,451
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Il15
interleukin 15
acts_upstream_of_or_within
ISO
(PMID:10704459)
MGI
PMID:10704459
NCBI chrNW_004936535:6,344,348...6,358,803
Ensembl chrNW_004936535:6,344,395...6,350,197
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Il7r
interleukin 7 receptor
acts_upstream_of_or_within
ISO
(PMID:12732660)
MGI
PMID:12732660
NCBI chrNW_004936518:5,815,820...5,842,571
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Lta
lymphotoxin alpha
acts_upstream_of_or_within involved_in
ISO IEA
(PMID:9565643) (PMID:8171322) (PMID:9368616) (PMID:10415063) (PMID:7636227)
MGI Ensembl
PMID:7636227 PMID:8171322 PMID:9368616 PMID:9565643 PMID:10415063
GO_REF:0000107
NCBI chrNW_004936727:1,940,081...1,941,022
Ensembl chrNW_004936727:1,940,081...1,941,022
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Ltb
lymphotoxin beta
acts_upstream_of_or_within involved_in
ISO IEA
(PMID:9256477) (PMID:9133428)
MGI Ensembl
PMID:9133428 PMID:9256477
GO_REF:0000107
NCBI chrNW_004936727:1,929,533...1,932,339
Ensembl chrNW_004936727:1,910,881...1,932,356
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Nkx2-3
NK2 homeobox 3
involved_in acts_upstream_of_or_within
IEA ISO
(PMID:10790368) (PMID:10926756)
Ensembl MGI
PMID:10790368 PMID:10926756
GO_REF:0000107
NCBI chrNW_004936636:529,669...532,237
Ensembl chrNW_004936636:529,669...532,237
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Pdpn
podoplanin
involved_in
IEA
Ensembl
GO_REF:0000107
NCBI chrNW_004936474:1,751,159...1,779,011
Ensembl chrNW_004936474:1,750,944...1,781,156
G
Polb
DNA polymerase beta
acts_upstream_of_or_within involved_in
ISO IEA
(PMID:24388753)
MGI Ensembl
PMID:24388753
GO_REF:0000107
NCBI chrNW_004936785:324,655...350,496
Ensembl chrNW_004936785:323,941...350,539
G
Rc3h1
ring finger and CCCH-type domains 1
acts_upstream_of_or_within involved_in
ISO IEA
(PMID:23583643)
MGI Ensembl
PMID:23583643
GO_REF:0000107
NCBI chrNW_004936481:13,919,006...13,973,868
Ensembl chrNW_004936481:13,919,257...13,966,677
G
Rc3h2
ring finger and CCCH-type domains 2
involved_in acts_upstream_of_or_within
IEA ISO
(PMID:23583643)
Ensembl MGI
PMID:23583643
GO_REF:0000107
NCBI chrNW_004936487:11,341,663...11,393,275
Ensembl chrNW_004936487:11,341,700...11,389,859
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Rcbtb2
RCC1 and BTB domain containing protein 2
involved_in acts_upstream_of_or_within
IEA ISO
(PMID:26291700)
Ensembl MGI
PMID:26291700
GO_REF:0000107
NCBI chrNW_004936565:1,750,565...1,789,779
Ensembl chrNW_004936565:1,750,105...1,789,737
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Ripk3
receptor interacting serine/threonine kinase 3
involved_in
ISS IEA
UniProt Ensembl
GO_REF:0000024 GO_REF:0000107
NCBI chrNW_004936722:209,019...212,817
Ensembl chrNW_004936722:209,013...212,839
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Rorc
RAR related orphan receptor C
involved_in acts_upstream_of_or_within
ISO
(PMID:14691482)
UniProt MGI
PMID:14691482
NCBI chrNW_004936580:1,997,640...2,020,649
Ensembl chrNW_004936580:1,997,640...2,020,649
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Spns2
SPNS lysolipid transporter 2, sphingosine-1-phosphate
involved_in acts_upstream_of_or_within
IEA ISO
(PMID:23180825)
Ensembl MGI
PMID:23180825
GO_REF:0000107
NCBI chrNW_004936677:1,058,601...1,093,233
Ensembl chrNW_004936677:1,058,595...1,093,147
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Tgfb1
transforming growth factor beta 1
acts_upstream_of_or_within involved_in
ISO IEA
(PMID:1436033)
MGI Ensembl
PMID:1436033
GO_REF:0000107
NCBI chrNW_004936661:3,742,080...3,758,266
Ensembl chrNW_004936661:3,742,066...3,758,272
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Tnfrsf11a
TNF receptor superfamily member 11a
involved_in acts_upstream_of_or_within
IEA ISO
(PMID:10500098)
TreeGrafter MGI Ensembl
PMID:10500098
GO_REF:0000107 GO_REF:0000118
NCBI chrNW_004936497:2,944,841...2,986,113
Ensembl chrNW_004936497:2,945,010...2,995,207
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Tox
thymocyte selection associated high mobility group box
acts_upstream_of_or_within involved_in
ISO IEA
(PMID:20818394)
MGI Ensembl
PMID:20818394
GO_REF:0000107
NCBI chrNW_004936496:13,847,210...14,146,110
Ensembl chrNW_004936496:13,847,210...14,147,886
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Traf3ip2
TRAF3 interacting protein 2
involved_in
IEA
Ensembl
GO_REF:0000107
NCBI chrNW_004936679:308,508...348,561
Ensembl chrNW_004936679:316,277...336,557
G
Nkx2-3
NK2 homeobox 3
acts_upstream_of_or_within involved_in
ISO IEA
(PMID:10926756)
MGI Ensembl
PMID:10926756
GO_REF:0000107
NCBI chrNW_004936636:529,669...532,237
Ensembl chrNW_004936636:529,669...532,237
G
Rorc
RAR related orphan receptor C
acts_upstream_of_or_within
ISO
(PMID:15247480)
MGI
PMID:15247480
NCBI chrNW_004936580:1,997,640...2,020,649
Ensembl chrNW_004936580:1,997,640...2,020,649
G
Havcr2
hepatitis A virus cellular receptor 2
involved_in
ISO
(PMID:25578313)
UniProt
PMID:25578313
NCBI chrNW_004936515:6,001,324...6,015,407
G
Lgals9
galectin 9
involved_in
ISO
(PMID:25578313)
UniProt
PMID:25578313
NCBI chrNW_004936538:4,034,467...4,050,240
G
Parp3
poly(ADP-ribose) polymerase family member 3
involved_in
IEA
Ensembl
GO_REF:0000107
NCBI chrNW_004936529:3,291,282...3,297,581
Ensembl chrNW_004936529:3,291,269...3,299,992
G
Bcl6
BCL6 transcription repressor
involved_in acts_upstream_of_or_within
IEA ISO
(PMID:10490661)
Ensembl MGI
PMID:10490661
GO_REF:0000107
NCBI chrNW_004936578:2,371,976...2,395,034
Ensembl chrNW_004936578:2,371,945...2,395,071
G
Foxp3
forkhead box P3
involved_in acts_upstream_of_or_within
IEA ISO
(PMID:16275384)
Ensembl MGI
PMID:16275384
GO_REF:0000107
NCBI chrNW_004936721:1,118,376...1,125,282
Ensembl chrNW_004936721:1,118,782...1,132,308
G
Ndfip1
Nedd4 family interacting protein 1
acts_upstream_of_or_within
ISO
(PMID:17137798)
MGI
PMID:17137798
NCBI chrNW_004936504:12,053,470...12,103,346
G
Cd86
CD86 molecule
ISO
RGD
PMID:18424705
RGD:4892228
NCBI chrNW_004936536:8,414,491...8,481,712
G
Pdcd1
programmed cell death 1
acts_upstream_of_or_within involved_in
ISO IEA
(PMID:23636058)
MGI Ensembl
PMID:23636058
GO_REF:0000107
NCBI chrNW_004936745:152,571...163,712
Ensembl chrNW_004936745:152,612...161,587
G
Aire
autoimmune regulator
involved_in
IEA
Ensembl
GO_REF:0000107
NCBI chrNW_004936500:125,589...137,071
Ensembl chrNW_004936500:125,795...137,056
G
Ada
adenosine deaminase
acts_upstream_of_or_within
ISO
(PMID:10720488)
MGI
PMID:10720488
NCBI chrNW_004936530:2,217,713...2,224,070
G
Cacnb4
calcium voltage-gated channel auxiliary subunit beta 4
involved_in acts_upstream_of_or_within
IEA ISO
(PMID:5037658)
Ensembl MGI
PMID:5037658
GO_REF:0000107
NCBI chrNW_004936469:25,494,820...25,745,783
Ensembl chrNW_004936469:25,494,883...25,740,223
G
Id2
inhibitor of DNA binding 2
acts_upstream_of_or_within
ISO
(PMID:17452521)
MGI
PMID:17452521
NCBI chrNW_004936532:5,236,175...5,238,689
Ensembl chrNW_004936532:5,236,037...5,238,881
G
Ikzf1
IKAROS family zinc finger 1
acts_upstream_of_or_within
ISO
(PMID:7923373)
MGI
PMID:7923373
NCBI chrNW_004936686:1,459,582...1,556,478
Ensembl chrNW_004936686:1,462,145...1,556,451
G
LOC101954516
signal transducer and activator of transcription 5B
acts_upstream_of_or_within involved_in
ISO IEA
(PMID:15294943)
MGI Ensembl
PMID:15294943
GO_REF:0000107
NCBI chrNW_004936490:17,022,268...17,043,751
Ensembl chrNW_004936490:17,021,051...17,043,941
G
Nkx2-3
NK2 homeobox 3
involved_in acts_upstream_of_or_within
IEA ISO
(PMID:10790368)
Ensembl MGI
PMID:10790368
GO_REF:0000107
NCBI chrNW_004936636:529,669...532,237
Ensembl chrNW_004936636:529,669...532,237
G
Rorc
RAR related orphan receptor C
involved_in
ISO
(PMID:14691482)
UniProt
PMID:14691482
NCBI chrNW_004936580:1,997,640...2,020,649
Ensembl chrNW_004936580:1,997,640...2,020,649
G
Tcf3
transcription factor 3
acts_upstream_of_or_within
ISO
(PMID:17452521)
MGI
PMID:17452521
NCBI chrNW_004936588:884,817...913,052
Ensembl chrNW_004936588:884,789...912,753
G
Tox
thymocyte selection associated high mobility group box
involved_in acts_upstream_of_or_within
IEA ISO
(PMID:20818394)
Ensembl MGI
PMID:20818394
GO_REF:0000107
NCBI chrNW_004936496:13,847,210...14,146,110
Ensembl chrNW_004936496:13,847,210...14,147,886
G
Artn
artemin
involved_in
IEA
Ensembl
GO_REF:0000107
NCBI chrNW_004936474:25,252,510...25,254,221
Ensembl chrNW_004936474:25,252,684...25,253,810
G
Foxl1
forkhead box L1
involved_in acts_upstream_of_or_within
IEA ISO
(PMID:12648490)
Ensembl MGI
PMID:12648490
GO_REF:0000107
NCBI chrNW_004936641:2,226,489...2,227,613
Ensembl chrNW_004936641:2,226,550...2,227,578
G
Ret
ret proto-oncogene
involved_in
IEA
Ensembl
GO_REF:0000107
NCBI chrNW_004936617:2,927,185...2,980,594
Ensembl chrNW_004936617:2,927,155...2,980,602
G
Tgfbr2
transforming growth factor beta receptor 2
involved_in acts_upstream_of_or_within
IEA ISO
(PMID:16973387)
Ensembl MGI
PMID:16973387
GO_REF:0000107
NCBI chrNW_004936473:21,324,669...21,409,430
Ensembl chrNW_004936473:21,324,658...21,409,430
G
Foxj1
forkhead box J1
involved_in
IEA
Ensembl
GO_REF:0000107
NCBI chrNW_004936594:1,284,799...1,288,898
Ensembl chrNW_004936594:1,284,781...1,289,361
G
Tnfsf4
TNF superfamily member 4
involved_in
ISO
(PMID:12496423)
BHF-UCL
PMID:12496423
NCBI chrNW_004936481:14,391,359...14,409,514
G
Exosc3
exosome component 3
acts_upstream_of_or_within involved_in
ISO IEA
(PMID:21255825)
MGI Ensembl
PMID:21255825
GO_REF:0000107
NCBI chrNW_004936524:5,580,855...5,586,170
Ensembl chrNW_004936524:5,581,090...5,586,128
G
Exosc6
exosome component 6
involved_in acts_upstream_of_or_within
IEA ISO
(PMID:21255825)
Ensembl MGI
PMID:21255825
GO_REF:0000107
NCBI chrNW_004936475:23,295,441...23,297,321
Ensembl chrNW_004936475:23,295,500...23,296,318
G
Hmces
5-hydroxymethylcytosine binding, ES cell specific
involved_in
IEA
Ensembl
GO_REF:0000107
NCBI chrNW_004936798:261,566...284,480
Ensembl chrNW_004936798:261,661...273,011
G
Kmt5b
lysine methyltransferase 5B
involved_in
IEA
Ensembl
GO_REF:0000107
NCBI chrNW_004936599:1,928,172...1,983,983
Ensembl chrNW_004936599:1,928,145...1,984,008
G
Kmt5c
lysine methyltransferase 5C
involved_in
IEA
Ensembl
GO_REF:0000107
NCBI chrNW_004936886:596,949...602,959
Ensembl chrNW_004936886:595,782...604,286
G
Mad2l2
mitotic arrest deficient 2 like 2
involved_in
IEA
Ensembl
GO_REF:0000107
NCBI chrNW_004936474:538,703...542,901
Ensembl chrNW_004936474:538,625...542,901
G
Paxip1
PAX interacting protein 1
involved_in
IEA
Ensembl
GO_REF:0000107
NCBI chrNW_004936527:9,440,129...9,488,215
Ensembl chrNW_004936527:9,440,036...9,484,245
G
Rif1
replication timing regulatory factor 1
involved_in
IEA
Ensembl
GO_REF:0000107
NCBI chrNW_004936469:26,045,500...26,105,980
Ensembl chrNW_004936469:26,048,953...26,105,997
G
Shld1
shieldin complex subunit 1
involved_in
IEA
TreeGrafter Ensembl
GO_REF:0000107 GO_REF:0000118
NCBI chrNW_004936485:13,179,218...13,267,980
Ensembl chrNW_004936485:13,176,426...13,267,953
G
Shld2
shieldin complex subunit 2
involved_in
IEA
Ensembl
GO_REF:0000107
NCBI chrNW_004936601:5,315,297...5,400,752
Ensembl chrNW_004936601:5,315,261...5,396,301
G
Shld3
shieldin complex subunit 3
involved_in
ISO
(PMID:29656893)
UniProt
PMID:29656893
G
Tfrc
transferrin receptor
involved_in
IEA
Ensembl
GO_REF:0000107
NCBI chrNW_004936784:696,738...728,385
Ensembl chrNW_004936784:696,713...728,543
G
Tp53bp1
tumor protein p53 binding protein 1
involved_in
IEA
Ensembl
GO_REF:0000107
NCBI chrNW_004936471:6,589,395...6,668,242
Ensembl chrNW_004936471:6,589,564...6,668,305
G
Mlh1
mutL homolog 1
involved_in
IEA
Ensembl
GO_REF:0000107
NCBI chrNW_004936473:26,556,636...26,600,830
Ensembl chrNW_004936473:26,556,611...26,603,736
G
Msh2
mutS homolog 2
involved_in
IEA
Ensembl
GO_REF:0000107
NCBI chrNW_004936508:4,943,987...5,013,356
Ensembl chrNW_004936508:4,944,007...5,013,356
G
Nsd2
nuclear receptor binding SET domain protein 2
involved_in acts_upstream_of_or_within
IEA ISO
(PMID:23241889)
Ensembl MGI
PMID:23241889
GO_REF:0000107
NCBI chrNW_004936477:21,460,442...21,531,563
Ensembl chrNW_004936477:21,460,478...21,534,909
G
Pms2
PMS1 homolog 2, mismatch repair system component
involved_in
ISO
(PMID:10430621)
CAFA
PMID:10430621
NCBI chrNW_004936750:439,396...468,747
G
Tgfb1
transforming growth factor beta 1
acts_upstream_of_or_within involved_in
ISO IEA ISS
(PMID:14988498)
MGI Ensembl AgBase
PMID:14988498
GO_REF:0000024 GO_REF:0000107
NCBI chrNW_004936661:3,742,080...3,758,266
Ensembl chrNW_004936661:3,742,066...3,758,272
G
Tnfsf13
TNF superfamily member 13
acts_upstream_of_or_within involved_in
ISO IEA
(PMID:14988498)
MGI Ensembl TreeGrafter
PMID:14988498
GO_REF:0000107 GO_REF:0000118
NCBI chrNW_004936595:839,877...842,962
Ensembl chrNW_004936595:839,877...842,962
G
Clcf1
cardiotrophin like cytokine factor 1
involved_in
IEA
Ensembl
GO_REF:0000107
NCBI chrNW_004936599:2,372,889...2,376,316
Ensembl chrNW_004936599:2,372,031...2,376,939
G
Stat6
signal transducer and activator of transcription 6
involved_in acts_upstream_of_or_within
IEA ISO
(PMID:10490661)
Ensembl MGI
PMID:10490661
GO_REF:0000107
NCBI chrNW_004936646:1,297,530...1,312,508
Ensembl chrNW_004936646:1,296,290...1,312,157
G
Atad5
ATPase family AAA domain containing 5
involved_in acts_upstream_of_or_within
IEA ISO
(PMID:25404367)
Ensembl MGI
PMID:25404367
GO_REF:0000107
NCBI chrNW_004936538:2,815,370...2,877,084
Ensembl chrNW_004936538:2,811,174...2,874,113
G
Cd28
CD28 molecule
involved_in acts_upstream_of_or_within
IEA ISO
(PMID:7688139)
Ensembl MGI
PMID:7688139
GO_REF:0000107
NCBI chrNW_004936631:335,411...363,407
Ensembl chrNW_004936631:335,411...363,407
G
Cd40
CD40 molecule
involved_in acts_upstream_of_or_within
IEA ISO
(PMID:12882831)
Ensembl MGI
PMID:12882831
GO_REF:0000107
NCBI chrNW_004936514:6,936,915...6,947,246
Ensembl chrNW_004936514:6,936,572...6,947,280
G
Ifng
interferon gamma
acts_upstream_of_or_within
ISO
(PMID:12882831)
MGI
PMID:12882831
NCBI chrNW_004936545:6,139,130...6,144,543
Ensembl chrNW_004936545:6,139,116...6,148,452
G
Il2
interleukin 2
acts_upstream_of_or_within involved_in
ISO IEA
(PMID:1830926)
MGI Ensembl
PMID:1830926
GO_REF:0000107
NCBI chrNW_004936662:1,594,953...1,599,625
Ensembl chrNW_004936662:1,594,953...1,599,625
G
Mlh1
mutL homolog 1
involved_in
IEA
Ensembl
GO_REF:0000107
NCBI chrNW_004936473:26,556,636...26,600,830
Ensembl chrNW_004936473:26,556,611...26,603,736
G
Msh2
mutS homolog 2
involved_in
IEA
Ensembl
GO_REF:0000107
NCBI chrNW_004936508:4,943,987...5,013,356
Ensembl chrNW_004936508:4,944,007...5,013,356
G
Pagr1
PAXIP1 associated glutamate rich protein 1
involved_in
ISO
(PMID:26744420)
UniProt
PMID:26744420
NCBI chrNW_004936501:12,657,092...12,660,106
Ensembl chrNW_004936501:12,656,435...12,660,067
G
Paxip1
PAX interacting protein 1
involved_in
IEA
Ensembl
GO_REF:0000107
NCBI chrNW_004936527:9,440,129...9,488,215
Ensembl chrNW_004936527:9,440,036...9,484,245
G
Pms2
PMS1 homolog 2, mismatch repair system component
involved_in
ISO
(PMID:10430621)
CAFA
PMID:10430621
NCBI chrNW_004936750:439,396...468,747
G
Ptprc
protein tyrosine phosphatase receptor type C
involved_in acts_upstream_of_or_within
IEA ISO
(PMID:9015183)
Ensembl MGI
PMID:9015183
GO_REF:0000107
NCBI chrNW_004936567:5,266,653...5,378,464
Ensembl chrNW_004936567:5,267,615...5,378,258
G
Tbx21
T-box transcription factor 21
involved_in acts_upstream_of_or_within
IEA ISO
(PMID:12882831)
Ensembl MGI
PMID:12882831
GO_REF:0000107
NCBI chrNW_004936490:13,546,405...13,558,635
Ensembl chrNW_004936490:13,546,292...13,558,635
G
Irak3
interleukin 1 receptor associated kinase 3
involved_in
IEA
Ensembl
GO_REF:0000107
NCBI chrNW_004936545:4,233,353...4,284,324
Ensembl chrNW_004936545:4,233,358...4,282,806
G
Foxp3
forkhead box P3
involved_in acts_upstream_of_or_within
IEA ISO
(PMID:16532000)
Ensembl MGI
PMID:16532000
GO_REF:0000107
NCBI chrNW_004936721:1,118,376...1,125,282
Ensembl chrNW_004936721:1,118,782...1,132,308
G
Cblb
Cbl proto-oncogene B
involved_in acts_upstream_of_or_within
IEA ISO
(PMID:14973438)
Ensembl MGI
PMID:14973438
GO_REF:0000107
NCBI chrNW_004936701:1,157,790...1,353,375
Ensembl chrNW_004936701:1,157,797...1,353,388
G
Cd3e
CD3e molecule
acts_upstream_of_or_within
ISO
(PMID:14973438)
MGI
PMID:14973438
NCBI chrNW_004936542:3,379,361...3,390,677
G
Foxp3
forkhead box P3
involved_in acts_upstream_of_or_within
IEA ISO
(PMID:16945588)
Ensembl MGI
PMID:16945588
GO_REF:0000107
NCBI chrNW_004936721:1,118,376...1,125,282
Ensembl chrNW_004936721:1,118,782...1,132,308
G
Itch
itchy E3 ubiquitin protein ligase
involved_in acts_upstream_of_or_within
IEA ISO
(PMID:14973438)
Ensembl MGI
PMID:14973438
GO_REF:0000107
NCBI chrNW_004936561:6,140,236...6,265,734
Ensembl chrNW_004936561:6,140,234...6,265,767
G
Nr5a2
nuclear receptor subfamily 5 group A member 2
involved_in
IEA
Ensembl
GO_REF:0000107
NCBI chrNW_004936567:4,084,161...4,194,858
Ensembl chrNW_004936567:4,084,608...4,212,854
G
Foxp3
forkhead box P3
involved_in acts_upstream_of_or_within
IEA ISO
(PMID:16945588)
Ensembl MGI
PMID:16945588
GO_REF:0000107
NCBI chrNW_004936721:1,118,376...1,125,282
Ensembl chrNW_004936721:1,118,782...1,132,308
G
Ido1
indoleamine 2,3-dioxygenase 1
acts_upstream_of_or_within involved_in
ISO IEA
(PMID:9712583)
MGI Ensembl
PMID:9712583
GO_REF:0000107
NCBI chrNW_004936843:658,058...672,662
Ensembl chrNW_004936843:657,979...672,700
G
Tgfbr2
transforming growth factor beta receptor 2
involved_in acts_upstream_of_or_within
IEA ISO
(PMID:16973387)
Ensembl MGI
PMID:16973387
GO_REF:0000107
NCBI chrNW_004936473:21,324,669...21,409,430
Ensembl chrNW_004936473:21,324,658...21,409,430
G
Tgfbr2
transforming growth factor beta receptor 2
involved_in acts_upstream_of_or_within
IEA ISO
(PMID:16973387)
Ensembl MGI
PMID:16973387
GO_REF:0000107
NCBI chrNW_004936473:21,324,669...21,409,430
Ensembl chrNW_004936473:21,324,658...21,409,430
G
Aplf
aprataxin and PNKP like factor
involved_in acts_upstream_of_or_within
IEA ISO
(PMID:21211721)
Ensembl MGI
PMID:21211721
GO_REF:0000107
NCBI chrNW_004936491:12,857,928...12,961,709
Ensembl chrNW_004936491:12,857,785...12,962,376
G
Supt6h
SPT6 homolog, histone chaperone and transcription elongation factor
involved_in
IEA
Ensembl
GO_REF:0000107
NCBI chrNW_004936538:4,878,645...4,910,613
Ensembl chrNW_004936538:4,878,662...4,910,597
G
Foxp3
forkhead box P3
acts_upstream_of_or_within involved_in
ISO IEA
(PMID:16275384)
MGI Ensembl
PMID:16275384
GO_REF:0000107
NCBI chrNW_004936721:1,118,376...1,125,282
Ensembl chrNW_004936721:1,118,782...1,132,308
G
Il27ra
interleukin 27 receptor subunit alpha
acts_upstream_of_or_within involved_in
ISO IEA
(PMID:11057672)
MGI Ensembl
PMID:11057672
GO_REF:0000107
NCBI chrNW_004936659:2,706,037...2,720,486
Ensembl chrNW_004936659:2,705,985...2,722,748
G
Ndfip1
Nedd4 family interacting protein 1
acts_upstream_of_or_within
ISO
(PMID:17137798)
MGI
PMID:17137798
NCBI chrNW_004936504:12,053,470...12,103,346
G
Slc15a4
solute carrier family 15 member 4
involved_in
ISO
(PMID:25310967)
UniProt
PMID:25310967
NCBI chrNW_004936660:481,772...493,567
G
Foxp3
forkhead box P3
involved_in
IEA
Ensembl
GO_REF:0000107
NCBI chrNW_004936721:1,118,376...1,125,282
Ensembl chrNW_004936721:1,118,782...1,132,308
G
Phlpp1
PH domain and leucine rich repeat protein phosphatase 1
involved_in
IEA
Ensembl
GO_REF:0000107
NCBI chrNW_004936497:2,467,776...2,683,794
Ensembl chrNW_004936497:2,467,684...2,683,799
G
Il2ra
interleukin 2 receptor subunit alpha
involved_in
IEA
Ensembl
GO_REF:0000107
NCBI chrNW_004936484:8,514,333...8,555,392
Ensembl chrNW_004936484:8,544,062...8,555,332
G
Hmgb1
high mobility group box 1
involved_in
IEA
Ensembl
GO_REF:0000107
NCBI chrNW_004936472:25,236,728...25,246,585
Ensembl chrNW_004936472:25,236,728...25,246,580
G
LOC101976825
high mobility group protein B1
involved_in
IEA
Ensembl
GO_REF:0000107
NCBI chrNW_004936516:6,259,790...6,261,016
G
Marchf7
membrane associated ring-CH-type finger 7
acts_upstream_of_or_within involved_in
ISO IEA
(PMID:15670816)
MGI Ensembl
PMID:15670816
GO_REF:0000107
NCBI chrNW_004936469:18,966,239...19,016,829
Ensembl chrNW_004936469:18,962,655...19,017,100
G
Havcr2
hepatitis A virus cellular receptor 2
involved_in
ISO
(PMID:14556006)
UniProt
PMID:14556006
NCBI chrNW_004936515:6,001,324...6,015,407
G
Adar
adenosine deaminase RNA specific
involved_in acts_upstream_of_or_within
IEA ISO
(PMID:23209284)
Ensembl MGI
PMID:23209284
GO_REF:0000107
NCBI chrNW_004936580:4,183,016...4,208,341
Ensembl chrNW_004936580:4,183,079...4,203,435
G
Aicda
activation induced cytidine deaminase
involved_in
IEA
Ensembl
GO_REF:0000107
NCBI chrNW_004936870:25,039...34,601
Ensembl chrNW_004936870:25,039...34,601
G
Ctnnbl1
catenin beta like 1
involved_in
IEA
Ensembl
GO_REF:0000107
NCBI chrNW_004936561:3,434,232...3,589,341
Ensembl chrNW_004936561:3,434,731...3,589,341
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Polb
DNA polymerase beta
acts_upstream_of_or_within involved_in
ISO IEA
(PMID:24388753)
MGI Ensembl
PMID:24388753
GO_REF:0000107
NCBI chrNW_004936785:324,655...350,496
Ensembl chrNW_004936785:323,941...350,539
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Aicda
activation induced cytidine deaminase
involved_in
IEA
Ensembl
GO_REF:0000107
NCBI chrNW_004936870:25,039...34,601
Ensembl chrNW_004936870:25,039...34,601
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Exo1
exonuclease 1
acts_upstream_of_or_within
ISO
(PMID:14716311)
MGI
PMID:14716311
NCBI chrNW_004936526:8,570,488...8,627,004
G
Hmces
5-hydroxymethylcytosine binding, ES cell specific
involved_in
IEA
Ensembl
GO_REF:0000107
NCBI chrNW_004936798:261,566...284,480
Ensembl chrNW_004936798:261,661...273,011
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Mcm3ap
minichromosome maintenance complex component 3 associated protein
involved_in
IEA
Ensembl
GO_REF:0000107
NCBI chrNW_004936778:273,152...318,157
Ensembl chrNW_004936778:273,909...319,232
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Mlh1
mutL homolog 1
involved_in acts_upstream_of_or_within
IEA ISO
(PMID:10092760), (PMID:10429667)
Ensembl MGI TreeGrafter
PMID:10092760 PMID:10429667
GO_REF:0000107 GO_REF:0000118
NCBI chrNW_004936473:26,556,636...26,600,830
Ensembl chrNW_004936473:26,556,611...26,603,736
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Msh2
mutS homolog 2
acts_upstream_of_or_within NOT|acts_upstream_of_or_within involved_in
ISO IEA
(PMID:14568978) (PMID:15494304) (PMID:9607915) (PMID:9607916) (PMID:9697842), (PMID:9697843)
MGI Ensembl
PMID:9607915 PMID:9607916 PMID:9697842 PMID:9697843 PMID:14568978 PMID:15494304 More...
GO_REF:0000107
NCBI chrNW_004936508:4,943,987...5,013,356
Ensembl chrNW_004936508:4,944,007...5,013,356
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Msh3
mutS homolog 3
NOT|acts_upstream_of_or_within
ISO
(PMID:10662804)
MGI
PMID:10662804
NCBI chrNW_004936469:82,967...275,772
Ensembl chrNW_004936469:83,285...273,561
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Msh6
mutS homolog 6
acts_upstream_of_or_within involved_in
ISO IEA
(PMID:10662804), (PMID:15238604), (PMID:17015724) (PMID:16618598)
MGI Ensembl
PMID:10662804 PMID:15238604 PMID:16618598 PMID:17015724
GO_REF:0000107
NCBI chrNW_004936508:4,708,661...4,728,671
Ensembl chrNW_004936508:4,708,661...4,728,787
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Nuggc
nuclear GTPase, germinal center associated
acts_upstream_of_or_within
ISO
(PMID:22833677)
MGI
PMID:22833677
NCBI chrNW_004936675:885,015...931,657
Ensembl chrNW_004936675:885,039...920,253
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Pms2
PMS1 homolog 2, mismatch repair system component
involved_in acts_upstream_of_or_within
IEA ISO
(PMID:10429667)
TreeGrafter MGI
PMID:10429667
GO_REF:0000118
NCBI chrNW_004936750:439,396...468,747
G
Polb
DNA polymerase beta
acts_upstream_of_or_within involved_in
ISO IEA
(PMID:24388753)
MGI Ensembl
PMID:24388753
GO_REF:0000107
NCBI chrNW_004936785:324,655...350,496
Ensembl chrNW_004936785:323,941...350,539
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Polm
DNA polymerase mu
acts_upstream_of_or_within
ISO
(PMID:15789338)
MGI
PMID:15789338
NCBI chrNW_004936478:19,032,995...19,042,400
Ensembl chrNW_004936478:19,032,920...19,042,432
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Polq
DNA polymerase theta
involved_in
IEA
Ensembl
GO_REF:0000107
NCBI chrNW_004936536:7,904,166...8,004,305
Ensembl chrNW_004936536:7,904,981...8,004,199
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Samhd1
SAM and HD domain containing deoxynucleoside triphosphate triphosphohydrolase 1
involved_in
IEA
Ensembl
GO_REF:0000107
NCBI chrNW_004936561:4,180,607...4,238,623
Ensembl chrNW_004936561:4,180,546...4,229,036
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Ung
uracil DNA glycosylase
acts_upstream_of_or_within involved_in
ISO IEA
(PMID:17015724) (PMID:15494304)
MGI Ensembl
PMID:15494304 PMID:17015724
GO_REF:0000107
NCBI chrNW_004936769:911,296...922,770
Ensembl chrNW_004936769:910,838...922,726
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Mlh1
mutL homolog 1
acts_upstream_of_or_within involved_in
ISO IEA
(PMID:11828012)
MGI Ensembl
PMID:11828012
GO_REF:0000107
NCBI chrNW_004936473:26,556,636...26,600,830
Ensembl chrNW_004936473:26,556,611...26,603,736
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Msh2
mutS homolog 2
acts_upstream_of_or_within involved_in
ISO IEA
(PMID:11828012) (PMID:14563316), (PMID:15955838) (PMID:15494304) (PMID:14568978)
MGI Ensembl
PMID:11828012 PMID:14563316 PMID:14568978 PMID:15494304 PMID:15955838
GO_REF:0000107
NCBI chrNW_004936508:4,943,987...5,013,356
Ensembl chrNW_004936508:4,944,007...5,013,356
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Msh3
mutS homolog 3
involved_in acts_upstream_of_or_within
IEA ISO
(PMID:15238604)
TreeGrafter MGI
PMID:15238604
GO_REF:0000118
NCBI chrNW_004936469:82,967...275,772
Ensembl chrNW_004936469:83,285...273,561
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Msh6
mutS homolog 6
involved_in acts_upstream_of_or_within
IEA ISO
(PMID:15238604)
Ensembl MGI
PMID:15238604
GO_REF:0000107
NCBI chrNW_004936508:4,708,661...4,728,671
Ensembl chrNW_004936508:4,708,661...4,728,787
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Pms2
PMS1 homolog 2, mismatch repair system component
acts_upstream_of_or_within
ISO
(PMID:11828012)
MGI
PMID:11828012
NCBI chrNW_004936750:439,396...468,747
G
Ung
uracil DNA glycosylase
acts_upstream_of_or_within involved_in
ISO IEA
(PMID:15494304)
MGI Ensembl
PMID:15494304
GO_REF:0000107
NCBI chrNW_004936769:911,296...922,770
Ensembl chrNW_004936769:910,838...922,726
G
Mlh1
mutL homolog 1
acts_upstream_of_or_within involved_in
ISO IEA
(PMID:12743174)
MGI Ensembl
PMID:12743174
GO_REF:0000107
NCBI chrNW_004936473:26,556,636...26,600,830
Ensembl chrNW_004936473:26,556,611...26,603,736
G
Msh2
mutS homolog 2
involved_in acts_upstream_of_or_within
IEA ISO
(PMID:12743174)
Ensembl TreeGrafter MGI
PMID:12743174
GO_REF:0000107 GO_REF:0000118
NCBI chrNW_004936508:4,943,987...5,013,356
Ensembl chrNW_004936508:4,944,007...5,013,356
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Abl1
ABL proto-oncogene 1, non-receptor tyrosine kinase
involved_in acts_upstream_of_or_within
IEA ISO
(PMID:2065352)
Ensembl MGI
PMID:2065352
GO_REF:0000107
NCBI chrNW_004936487:17,690,206...17,819,619
Ensembl chrNW_004936487:17,690,968...17,819,669
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Adam17
ADAM metallopeptidase domain 17
involved_in
ISO
(PMID:17371977)
BHF-UCL
PMID:17371977
NCBI chrNW_004936532:5,864,851...5,904,005
Ensembl chrNW_004936532:5,864,867...5,904,003
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Ahr
aryl hydrocarbon receptor
involved_in
ISO
(PMID:7732381), (PMID:8692887)
DFLAT
PMID:7732381 PMID:8692887
NCBI chrNW_004936546:3,737,908...3,783,492
Ensembl chrNW_004936546:3,737,851...3,783,588
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Barx1
BARX homeobox 1
involved_in acts_upstream_of_or_within
IEA ISO
(PMID:17855428)
Ensembl MGI
PMID:17855428
GO_REF:0000107
NCBI chrNW_004937000:88,529...96,794
Ensembl chrNW_004937000:88,529...92,147
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Bcl2
BCL2 apoptosis regulator
acts_upstream_of_or_within involved_in
ISO IEA
(PMID:15818405)
MGI Ensembl
PMID:15818405
GO_REF:0000107
NCBI chrNW_004936497:2,209,136...2,373,580
Ensembl chrNW_004936497:2,210,334...2,210,921
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Bcl2l11
BCL2 like 11
involved_in acts_upstream_of_or_within
IEA ISO
(PMID:15818405)
Ensembl MGI
PMID:15818405
GO_REF:0000107
NCBI chrNW_004936783:15,493...50,959
Ensembl chrNW_004936783:18,194...50,983
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Bcl3
BCL3 transcription coactivator
involved_in acts_upstream_of_or_within
IEA ISO
(PMID:10586052)
Ensembl MGI
PMID:10586052
GO_REF:0000107
NCBI chrNW_004936706:1,410,848...1,427,822
Ensembl chrNW_004936706:1,416,249...1,427,407
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Cacnb4
calcium voltage-gated channel auxiliary subunit beta 4
involved_in acts_upstream_of_or_within
IEA ISO
(PMID:5037658)
Ensembl MGI
PMID:5037658
GO_REF:0000107
NCBI chrNW_004936469:25,494,820...25,745,783
Ensembl chrNW_004936469:25,494,883...25,740,223
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Cdh17
cadherin 17
involved_in
IEA
Ensembl
GO_REF:0000107
NCBI chrNW_004936544:7,156,213...7,208,392
Ensembl chrNW_004936544:7,156,213...7,205,127
G
Cdkn2b
cyclin dependent kinase inhibitor 2B
acts_upstream_of_or_within
ISO
(PMID:22560297)
MGI
PMID:22560297
NCBI chrNW_004936652:3,576,975...3,582,790
Ensembl chrNW_004936652:3,538,986...3,581,159
G
Cited2
Cbp/p300 interacting transactivator with Glu/Asp rich carboxy-terminal domain 2
involved_in
IEA
Ensembl
GO_REF:0000107
NCBI chrNW_004936560:6,353,901...6,356,749
Ensembl chrNW_004936560:6,354,338...6,356,735
G
Ctc1
CST telomere replication complex component 1
involved_in acts_upstream_of_or_within
IEA ISO
(PMID:22531781)
Ensembl MGI
PMID:22531781
GO_REF:0000107
NCBI chrNW_004936595:1,456,911...1,476,331
Ensembl chrNW_004936595:1,454,508...1,476,593
G
Dicer1
dicer 1, ribonuclease III
acts_upstream_of_or_within
ISO
(PMID:21307095)
MGI
PMID:21307095
NCBI chrNW_004936846:528,768...584,599
Ensembl chrNW_004936846:532,972...575,689
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Epb42
erythrocyte membrane protein band 4.2
involved_in acts_upstream_of_or_within
IEA ISO
(PMID:10359562)
Ensembl MGI
PMID:10359562
GO_REF:0000107
NCBI chrNW_004936471:6,377,232...6,393,588
Ensembl chrNW_004936471:6,377,775...6,395,753
G
Fadd
Fas associated via death domain
involved_in
IEA
Ensembl
GO_REF:0000107
NCBI chrNW_004936599:633,501...639,412
Ensembl chrNW_004936599:633,330...639,456
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Fam210b
family with sequence similarity 210 member B
acts_upstream_of_or_within involved_in
ISO IEA
(PMID:39000360)
MGI Ensembl
PMID:39000360
GO_REF:0000107
NCBI chrNW_004936875:284,612...291,649
Ensembl chrNW_004936875:284,664...291,649
G
Fas
Fas cell surface death receptor
acts_upstream_of_or_within
ISO
(PMID:18199416)
MGI
PMID:18199416
NCBI chrNW_004936735:209,369...234,582
G
Fgf10
fibroblast growth factor 10
involved_in acts_upstream_of_or_within
IEA ISO
(PMID:15329346)
Ensembl MGI
PMID:15329346
GO_REF:0000107
NCBI chrNW_004936480:18,114,231...18,195,884
Ensembl chrNW_004936480:18,114,204...18,195,898
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Flt3
fms related receptor tyrosine kinase 3
acts_upstream_of_or_within
ISO
(PMID:22674806)
MGI
PMID:22674806
NCBI chrNW_004936472:23,169,967...23,239,178
Ensembl chrNW_004936472:23,170,470...23,256,904
G
Flvcr1
FLVCR choline and heme transporter 1
involved_in acts_upstream_of_or_within
IEA ISO
(PMID:18258918)
Ensembl MGI
PMID:18258918
GO_REF:0000107
NCBI chrNW_004936557:693,445...727,166
Ensembl chrNW_004936557:692,489...726,965
G
Hoxb4
homeobox B4
acts_upstream_of_or_within involved_in
ISO IEA
(PMID:14962901)
MGI Ensembl
PMID:14962901
GO_REF:0000107
NCBI chrNW_004936490:12,808,679...12,811,688
Ensembl chrNW_004936490:12,808,679...12,811,688
G
Jarid2
jumonji and AT-rich interaction domain containing 2
involved_in acts_upstream_of_or_within
IEA ISO
(PMID:9376320)
Ensembl MGI
PMID:9376320
GO_REF:0000107
NCBI chrNW_004936552:1,566,382...1,786,837
Ensembl chrNW_004936552:1,566,788...1,785,490
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Kmt2a
lysine methyltransferase 2A
involved_in acts_upstream_of_or_within
IEA ISO
(PMID:22674806)
Ensembl MGI
PMID:22674806
GO_REF:0000107
NCBI chrNW_004936542:3,480,071...3,566,823
Ensembl chrNW_004936542:3,391,774...3,562,147
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LOC101960702
lysosomal acid lipase/cholesteryl ester hydrolase
involved_in
IEA
Ensembl
GO_REF:0000107
NCBI chrNW_004936601:4,975,296...5,008,938
Ensembl chrNW_004936601:4,975,211...5,008,962
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LOC101960907
uncharacterized LOC101960907
acts_upstream_of_or_within
ISO
(PMID:12874218)
MGI
PMID:12874218
NCBI chrNW_004936471:14,532,888...14,581,258
Ensembl chrNW_004936471:14,532,892...14,566,904
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LOC101967819
cytochrome c oxidase assembly factor 5
acts_upstream_of_or_within involved_in
ISO IEA
(PMID:36301669)
MGI Ensembl
PMID:36301669
GO_REF:0000107
NCBI chrNW_004936744:1,695,656...1,701,897
Ensembl chrNW_004936744:1,695,865...1,701,872
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LOC101974307
protein SCO1 homolog, mitochondrial
acts_upstream_of_or_within
ISO
(PMID:36301669)
MGI
PMID:36301669
NCBI chrNW_004936595:3,523,789...3,537,933
Ensembl chrNW_004936595:3,523,779...3,538,150
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LOC101977127
cyclin-dependent kinase inhibitor 2A
involved_in
IEA
Ensembl
GO_REF:0000107
NCBI chrNW_004936652:3,539,004...3,545,321
G
Myb
MYB proto-oncogene, transcription factor
acts_upstream_of_or_within
ISO
(PMID:19360001)
MGI
PMID:19360001
NCBI chrNW_004936560:2,797,943...2,828,813
Ensembl chrNW_004936560:2,796,697...2,829,650
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Nfkb2
nuclear factor kappa B subunit 2
involved_in acts_upstream_of_or_within
IEA ISO
(PMID:10586052)
Ensembl MGI
PMID:10586052
GO_REF:0000107
NCBI chrNW_004936600:3,465,016...3,471,258
Ensembl chrNW_004936600:3,465,162...3,471,205
G
Nfkbiz
NFKB inhibitor zeta
involved_in
IEA
Ensembl
GO_REF:0000107
NCBI chrNW_004936630:1,601,006...1,633,844
Ensembl chrNW_004936630:1,601,010...1,632,745
G
Nkx2-3
NK2 homeobox 3
acts_upstream_of_or_within involved_in
ISO IEA
(PMID:10926756) (PMID:10207146), (PMID:10790368)
MGI Ensembl
PMID:10207146 PMID:10790368 PMID:10926756
GO_REF:0000107
NCBI chrNW_004936636:529,669...532,237
Ensembl chrNW_004936636:529,669...532,237
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Nkx2-5
NK2 homeobox 5
involved_in acts_upstream_of_or_within
IEA ISO
(PMID:22560297)
Ensembl MGI
PMID:22560297
GO_REF:0000107
NCBI chrNW_004936609:2,406,004...2,408,980
Ensembl chrNW_004936609:2,406,004...2,409,046
G
Nkx3-2
NK3 homeobox 2
acts_upstream_of_or_within involved_in
ISO IEA
(PMID:19208343) (PMID:10449756), (PMID:15329346) (PMID:10572046)
MGI Ensembl
PMID:10449756 PMID:10572046 PMID:15329346 PMID:19208343
GO_REF:0000107
NCBI chrNW_004936477:13,999,045...14,001,659
Ensembl chrNW_004936477:13,999,045...14,001,659
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Nr1h3
nuclear receptor subfamily 1 group H member 3
ISO
RGD
PMID:17341476
RGD:401827282
NCBI chrNW_004936562:1,937,665...1,946,680
Ensembl chrNW_004936562:1,937,667...1,946,669
G
Onecut1
one cut homeobox 1
involved_in
IEA
Ensembl
GO_REF:0000107
G
Pbx1
PBX homeobox 1
involved_in acts_upstream_of_or_within
IEA ISO
(PMID:15944191) (PMID:22560297)
Ensembl MGI
PMID:15944191 PMID:22560297
GO_REF:0000107
NCBI chrNW_004936481:20,200,236...20,440,623
Ensembl chrNW_004936481:20,203,405...20,440,629
G
Pcid2
PCI domain containing 2
involved_in
IEA
Ensembl
GO_REF:0000107
NCBI chrNW_004936472:440,440...464,116
Ensembl chrNW_004936472:446,712...465,039
G
Pitx2
paired like homeodomain 2
involved_in
IEA
Ensembl
GO_REF:0000107
NCBI chrNW_004936563:1,713,294...1,732,431
G
Pkn1
protein kinase N1
involved_in acts_upstream_of_or_within
IEA ISO
(PMID:23223530)
Ensembl MGI
PMID:23223530
GO_REF:0000107
NCBI chrNW_004936659:2,990,905...3,014,553
Ensembl chrNW_004936659:2,990,937...3,014,485
G
Polb
DNA polymerase beta
involved_in acts_upstream_of_or_within
IEA ISO
(PMID:24388753)
Ensembl MGI
PMID:24388753
GO_REF:0000107
NCBI chrNW_004936785:324,655...350,496
Ensembl chrNW_004936785:323,941...350,539
G
Ppp2r3c
protein phosphatase 2 regulatory subunit B''gamma
involved_in acts_upstream_of_or_within
IEA ISO
(PMID:16129705)
Ensembl MGI
PMID:16129705
GO_REF:0000107
NCBI chrNW_004936494:9,247,600...9,283,019
Ensembl chrNW_004936494:9,244,588...9,283,019
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Prkdc
protein kinase, DNA-activated, catalytic subunit
ISO
RGD
PMID:22981234
RGD:8696027
NCBI chrNW_004936590:4,722,914...4,887,615
Ensembl chrNW_004936590:4,722,873...4,890,156
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Psmb9
proteasome 20S subunit beta 9
ISO
RGD
PMID:24707720
RGD:9854625
NCBI chrNW_004936476:25,894,313...25,899,132
Ensembl chrNW_004936476:25,894,027...25,899,319
G
Rbm15
RNA binding motif protein 15
involved_in acts_upstream_of_or_within
IEA ISO
(PMID:18981216)
Ensembl MGI
PMID:18981216
GO_REF:0000107
NCBI chrNW_004936704:1,779,981...1,787,339
Ensembl chrNW_004936704:1,779,482...1,788,710
G
Rc3h1
ring finger and CCCH-type domains 1
acts_upstream_of_or_within involved_in
ISO IEA
(PMID:23583643)
MGI Ensembl
PMID:23583643
GO_REF:0000107
NCBI chrNW_004936481:13,919,006...13,973,868
Ensembl chrNW_004936481:13,919,257...13,966,677
G
Rc3h2
ring finger and CCCH-type domains 2
involved_in acts_upstream_of_or_within
IEA ISO
(PMID:23583643)
Ensembl MGI
PMID:23583643
GO_REF:0000107
NCBI chrNW_004936487:11,341,663...11,393,275
Ensembl chrNW_004936487:11,341,700...11,389,859
G
Rcbtb2
RCC1 and BTB domain containing protein 2
acts_upstream_of_or_within involved_in
ISO IEA
(PMID:26291700)
MGI Ensembl
PMID:26291700
GO_REF:0000107
NCBI chrNW_004936565:1,750,565...1,789,779
Ensembl chrNW_004936565:1,750,105...1,789,737
G
Ripk3
receptor interacting serine/threonine kinase 3
involved_in
ISS IEA
UniProt Ensembl
GO_REF:0000024 GO_REF:0000107
NCBI chrNW_004936722:209,019...212,817
Ensembl chrNW_004936722:209,013...212,839
G
Samd9l
sterile alpha motif domain containing 9 like
acts_upstream_of_or_within
ISO
(PMID:24029230)
MGI
PMID:24029230
NCBI chrNW_004936803:731,878...754,540
Ensembl chrNW_004936803:749,740...754,473
G
Slc40a1
solute carrier family 40 member 1
acts_upstream_of_or_within involved_in
ISO IEA
(PMID:15342464)
MGI Ensembl
PMID:15342464
GO_REF:0000107
NCBI chrNW_004936506:8,396,593...8,415,069
Ensembl chrNW_004936506:8,396,912...8,416,374
G
Tcf21
transcription factor 21
involved_in
IEA
Ensembl
GO_REF:0000107
NCBI chrNW_004936560:1,733,903...1,736,895
Ensembl chrNW_004936560:1,733,903...1,736,890
G
Tet2
tet methylcytosine dioxygenase 2
acts_upstream_of_or_within
ISO
(PMID:21803851)
MGI
PMID:21803851
NCBI chrNW_004936752:440,137...577,339
Ensembl chrNW_004936752:440,136...577,615
G
Tlx1
T cell leukemia homeobox 1
acts_upstream_of_or_within
ISO
(PMID:11356032) (PMID:15944191)
MGI
PMID:11356032 PMID:15944191
NCBI chrNW_004936600:4,564,246...4,569,774
G
Traf3ip2
TRAF3 interacting protein 2
involved_in
IEA
Ensembl
GO_REF:0000107
NCBI chrNW_004936679:308,508...348,561
Ensembl chrNW_004936679:316,277...336,557
G
Slc40a1
solute carrier family 40 member 1
acts_upstream_of_or_within involved_in
ISO IEA
(PMID:15342464)
MGI Ensembl
PMID:15342464
GO_REF:0000107
NCBI chrNW_004936506:8,396,593...8,415,069
Ensembl chrNW_004936506:8,396,912...8,416,374
G
Cblb
Cbl proto-oncogene B
involved_in acts_upstream_of
IEA ISO
(PMID:14973438)
Ensembl MGI
PMID:14973438
GO_REF:0000107
NCBI chrNW_004936701:1,157,790...1,353,375
Ensembl chrNW_004936701:1,157,797...1,353,388
G
Cd3e
CD3e molecule
acts_upstream_of
ISO
(PMID:14973438)
MGI
PMID:14973438
NCBI chrNW_004936542:3,379,361...3,390,677
G
Foxp3
forkhead box P3
involved_in acts_upstream_of
IEA ISO
(PMID:16945588)
Ensembl MGI
PMID:16945588
GO_REF:0000107
NCBI chrNW_004936721:1,118,376...1,125,282
Ensembl chrNW_004936721:1,118,782...1,132,308
G
Itch
itchy E3 ubiquitin protein ligase
involved_in acts_upstream_of
IEA ISO
(PMID:14973438)
Ensembl MGI
PMID:14973438
GO_REF:0000107
NCBI chrNW_004936561:6,140,236...6,265,734
Ensembl chrNW_004936561:6,140,234...6,265,767
G
Bcl11b
BCL11 transcription factor B
acts_upstream_of_or_within involved_in
ISO IEA
(PMID:12717433)
MGI Ensembl
PMID:12717433
GO_REF:0000107
NCBI chrNW_004936604:3,023,781...3,110,104
Ensembl chrNW_004936604:3,023,844...3,110,083
G
Lef1
lymphoid enhancer binding factor 1
involved_in acts_upstream_of_or_within
IEA ISO
(PMID:9462507)
Ensembl MGI
PMID:9462507
GO_REF:0000107
NCBI chrNW_004936818:453,635...569,194
Ensembl chrNW_004936818:453,635...567,469
G
Lig4
DNA ligase 4
involved_in acts_upstream_of_or_within
IEA ISO
(PMID:10911993)
Ensembl MGI
PMID:10911993
GO_REF:0000107
NCBI chrNW_004936472:3,861,833...3,867,943
Ensembl chrNW_004936472:3,861,866...3,867,933
G
Prkdc
protein kinase, DNA-activated, catalytic subunit
involved_in acts_upstream_of_or_within
IEA ISO
(PMID:9768755)
Ensembl MGI
PMID:9768755
GO_REF:0000107
NCBI chrNW_004936590:4,722,914...4,887,615
Ensembl chrNW_004936590:4,722,873...4,890,156
G
Tcf7
transcription factor 7
acts_upstream_of_or_within
ISO
(PMID:9462507)
MGI
PMID:9462507
NCBI chrNW_004936647:1,096,726...1,125,753
Ensembl chrNW_004936647:1,097,019...1,125,729
G
Foxp3
forkhead box P3
involved_in acts_upstream_of
IEA ISO
(PMID:16945588)
Ensembl MGI
PMID:16945588
GO_REF:0000107
NCBI chrNW_004936721:1,118,376...1,125,282
Ensembl chrNW_004936721:1,118,782...1,132,308
G
Icos
inducible T cell costimulator
involved_in
ISO IEA
RGD TreeGrafter
PMID:16220623
GO_REF:0000118 RGD:1624271
NCBI chrNW_004936631:562,650...572,263
Ensembl chrNW_004936631:551,394...570,804
G
Abl1
ABL proto-oncogene 1, non-receptor tyrosine kinase
acts_upstream_of_or_within involved_in
ISO IEA
(PMID:2065352)
MGI Ensembl
PMID:2065352
GO_REF:0000107
NCBI chrNW_004936487:17,690,206...17,819,619
Ensembl chrNW_004936487:17,690,968...17,819,669
G
Adrm1
ADRM1 26S proteasome ubiquitin receptor
involved_in
ISO
(PMID:21048919)
BHF-UCL
PMID:21048919
NCBI chrNW_004936514:9,923,956...9,928,168
Ensembl chrNW_004936514:9,923,896...9,928,170
G
Apc
APC regulator of WNT signaling pathway
acts_upstream_of_or_within
ISO
(PMID:17002498) (PMID:16025118)
MGI
PMID:16025118 PMID:17002498
NCBI chrNW_004936531:6,899,580...7,019,016
Ensembl chrNW_004936531:6,899,788...7,019,453
G
Asxl1
ASXL transcriptional regulator 1
involved_in acts_upstream_of_or_within
IEA ISO
(PMID:19861679)
Ensembl MGI
PMID:19861679
GO_REF:0000107
NCBI chrNW_004936485:19,218,494...19,297,188
Ensembl chrNW_004936485:19,227,400...19,298,912
G
Atm
ATM serine/threonine kinase
involved_in acts_upstream_of_or_within
IEA ISO
(PMID:8843194)
Ensembl MGI
PMID:8843194
GO_REF:0000107
NCBI chrNW_004936551:359,134...534,672
Ensembl chrNW_004936551:359,362...532,211
G
Bcl11b
BCL11 transcription factor B
involved_in acts_upstream_of_or_within
IEA ISO
(PMID:12717433)
Ensembl MGI
PMID:12717433
GO_REF:0000107
NCBI chrNW_004936604:3,023,781...3,110,104
Ensembl chrNW_004936604:3,023,844...3,110,083
G
Bcl2
BCL2 apoptosis regulator
involved_in acts_upstream_of_or_within
IEA ISO
(PMID:15818405) (PMID:9241272)
Ensembl MGI
PMID:9241272 PMID:15818405
GO_REF:0000107
NCBI chrNW_004936497:2,209,136...2,373,580
Ensembl chrNW_004936497:2,210,334...2,210,921
G
Bcl2l11
BCL2 like 11
involved_in acts_upstream_of_or_within
IEA ISO
(PMID:15818405)
Ensembl MGI
PMID:15818405
GO_REF:0000107
NCBI chrNW_004936783:15,493...50,959
Ensembl chrNW_004936783:18,194...50,983
G
Braf
B-Raf proto-oncogene, serine/threonine kinase
involved_in acts_upstream_of_or_within
IEA ISO
(PMID:18952847)
Ensembl MGI
PMID:18952847
GO_REF:0000107
NCBI chrNW_004936592:4,728,371...4,833,830
Ensembl chrNW_004936592:4,737,011...4,834,664
G
Cacnb4
calcium voltage-gated channel auxiliary subunit beta 4
involved_in acts_upstream_of_or_within
IEA ISO
(PMID:5037658)
Ensembl MGI
PMID:5037658
GO_REF:0000107
NCBI chrNW_004936469:25,494,820...25,745,783
Ensembl chrNW_004936469:25,494,883...25,740,223
G
Carmil2
capping protein regulator and myosin 1 linker 2
acts_upstream_of_or_within
ISO
(PMID:23793062)
MGI
PMID:23793062
NCBI chrNW_004936475:18,036,233...18,049,144
Ensembl chrNW_004936475:18,035,994...18,049,129
G
Ccnb2
cyclin B2
acts_upstream_of_or_within
ISO
(PMID:9539739)
MGI
PMID:9539739
NCBI chrNW_004936471:20,216,435...20,238,543
G
Cited2
Cbp/p300 interacting transactivator with Glu/Asp rich carboxy-terminal domain 2
involved_in acts_upstream_of_or_within
IEA ISO
(PMID:20549734)
Ensembl MGI
PMID:20549734
GO_REF:0000107
NCBI chrNW_004936560:6,353,901...6,356,749
Ensembl chrNW_004936560:6,354,338...6,356,735
G
Crkl
CRK like proto-oncogene, adaptor protein
acts_upstream_of_or_within involved_in
ISO IEA
(PMID:16399080)
MGI Ensembl
PMID:16399080
GO_REF:0000107
NCBI chrNW_004936619:2,447,686...2,479,589
Ensembl chrNW_004936619:2,447,614...2,479,805
G
Ctc1
CST telomere replication complex component 1
acts_upstream_of_or_within involved_in
ISO IEA
(PMID:22531781)
MGI Ensembl
PMID:22531781
GO_REF:0000107
NCBI chrNW_004936595:1,456,911...1,476,331
Ensembl chrNW_004936595:1,454,508...1,476,593
G
Ctnnb1
catenin beta 1
involved_in acts_upstream_of_or_within
IEA ISO
(PMID:16025118)
Ensembl MGI
PMID:16025118
GO_REF:0000107
NCBI chrNW_004936473:29,999,542...30,034,610
Ensembl chrNW_004936473:29,999,562...30,038,293
G
Ephb3
EPH receptor B3
involved_in
IEA
Ensembl
GO_REF:0000107
NCBI chrNW_004936578:5,286,580...5,297,369
Ensembl chrNW_004936578:5,287,340...5,298,142
G
Fadd
Fas associated via death domain
involved_in
IEA
Ensembl
GO_REF:0000107
NCBI chrNW_004936599:633,501...639,412
Ensembl chrNW_004936599:633,330...639,456
G
Fgf10
fibroblast growth factor 10
involved_in
IEA
Ensembl
GO_REF:0000107
NCBI chrNW_004936480:18,114,231...18,195,884
Ensembl chrNW_004936480:18,114,204...18,195,898
G
Fgf3
fibroblast growth factor 3
acts_upstream_of_or_within
ISO
(PMID:17000704)
MGI
PMID:17000704
NCBI chrNW_004936599:868,634...875,464
Ensembl chrNW_004936599:868,634...875,464
G
Foxe1
forkhead box E1
involved_in
IEA
Ensembl
GO_REF:0000107
NCBI chrNW_004936524:6,619,128...6,620,278
Ensembl chrNW_004936524:6,619,128...6,620,278
G
Foxi3
forkhead box I3
involved_in
ISO
(PMID:31412026)
UniProt
PMID:31412026
NCBI chrNW_004936712:517,566...522,709
Ensembl chrNW_004936712:517,562...522,925
G
Foxn1
forkhead box N1
acts_upstream_of_or_within involved_in
ISO IEA
(PMID:22072979)
RGD MGI Ensembl
PMID:8790387 PMID:22072979
GO_REF:0000107 RGD:1300512
NCBI chrNW_004936538:4,717,509...4,745,504
Ensembl chrNW_004936538:4,731,958...4,744,796
G
Gata3
GATA binding protein 3
involved_in acts_upstream_of_or_within
IEA ISO
(PMID:17082577)
Ensembl MGI
PMID:17082577
GO_REF:0000107
NCBI chrNW_004936484:6,780,692...6,800,883
Ensembl chrNW_004936484:6,780,692...6,800,966
G
Hand2
heart and neural crest derivatives expressed 2
involved_in
IEA
Ensembl
GO_REF:0000107
NCBI chrNW_004936516:4,692,926...4,695,625
Ensembl chrNW_004936516:4,692,926...4,695,632
G
Hes1
hes family bHLH transcription factor 1
involved_in
IEA
Ensembl
GO_REF:0000107
NCBI chrNW_004936711:640,002...642,580
Ensembl chrNW_004936711:639,905...642,622
G
Hnrnpk
heterogeneous nuclear ribonucleoprotein K
ISO
RGD
PMID:16488668
RGD:10002779
NCBI chrNW_004936828:827,660...839,088
Ensembl chrNW_004936828:828,837...838,720
G
Hoxa3
homeobox A3
involved_in acts_upstream_of_or_within
IEA ISO
(PMID:9520319) (PMID:7635047) (PMID:11476574)
Ensembl MGI
PMID:7635047 PMID:9520319 PMID:11476574
GO_REF:0000107
NCBI chrNW_004936478:3,735,509...3,767,899
Ensembl chrNW_004936478:3,735,505...3,767,899
G
Ikzf1
IKAROS family zinc finger 1
acts_upstream_of_or_within
ISO
(PMID:7923373)
MGI
PMID:7923373
NCBI chrNW_004936686:1,459,582...1,556,478
Ensembl chrNW_004936686:1,462,145...1,556,451
G
Jarid2
jumonji and AT-rich interaction domain containing 2
involved_in acts_upstream_of_or_within
IEA ISO
(PMID:9376320)
Ensembl MGI
PMID:9376320
GO_REF:0000107
NCBI chrNW_004936552:1,566,382...1,786,837
Ensembl chrNW_004936552:1,566,788...1,785,490
G
Lmo4
LIM domain only 4
involved_in acts_upstream_of_or_within
IEA ISO
(PMID:20549734)
Ensembl MGI
PMID:20549734
GO_REF:0000107
NCBI chrNW_004936732:1,541,511...1,557,845
Ensembl chrNW_004936732:1,541,515...1,555,735
G
LOC101967819
cytochrome c oxidase assembly factor 5
acts_upstream_of_or_within involved_in
ISO IEA
(PMID:36301669)
MGI Ensembl
PMID:36301669
GO_REF:0000107
NCBI chrNW_004936744:1,695,656...1,701,897
Ensembl chrNW_004936744:1,695,865...1,701,872
G
LOC101974307
protein SCO1 homolog, mitochondrial
acts_upstream_of_or_within
ISO
(PMID:36301669)
MGI
PMID:36301669
NCBI chrNW_004936595:3,523,789...3,537,933
Ensembl chrNW_004936595:3,523,779...3,538,150
G
Mad1l1
mitotic arrest deficient 1 like 1
acts_upstream_of_or_within
ISO
(PMID:11313860)
MGI
PMID:11313860
NCBI chrNW_004936754:1,842,588...1,957,116
G
Mafb
MAF bZIP transcription factor B
acts_upstream_of_or_within involved_in
ISO IEA
(PMID:19164599)
MGI Ensembl
PMID:19164599
GO_REF:0000107
NCBI chrNW_004936561:1,007,273...1,010,548
Ensembl chrNW_004936561:1,007,647...1,008,618
G
Map2k1
mitogen-activated protein kinase kinase 1
involved_in acts_upstream_of_or_within
IEA ISO
(PMID:18952847)
Ensembl MGI
PMID:18952847
GO_REF:0000107
NCBI chrNW_004936471:26,589,251...26,628,302
Ensembl chrNW_004936471:26,589,161...26,628,302
G
Map2k2
mitogen-activated protein kinase kinase 2
acts_upstream_of_or_within involved_in
ISO IEA
(PMID:18952847)
MGI Ensembl
PMID:18952847
GO_REF:0000107
NCBI chrNW_004936588:2,338,127...2,377,090
Ensembl chrNW_004936588:2,336,858...2,377,090
G
Mapk1
mitogen-activated protein kinase 1
involved_in acts_upstream_of_or_within
IEA ISO
(PMID:18952847)
Ensembl MGI
PMID:18952847
GO_REF:0000107
NCBI chrNW_004936619:1,889,841...1,932,646
Ensembl chrNW_004936619:1,889,708...1,932,646
G
Mapk3
mitogen-activated protein kinase 3
involved_in acts_upstream_of_or_within
IEA ISO
(PMID:18952847)
Ensembl MGI
PMID:18952847
GO_REF:0000107
NCBI chrNW_004936501:12,342,670...12,390,650
Ensembl chrNW_004936501:12,384,804...12,392,180
G
Myb
MYB proto-oncogene, transcription factor
acts_upstream_of_or_within
ISO
(PMID:17927961)
MGI
PMID:17927961
NCBI chrNW_004936560:2,797,943...2,828,813
Ensembl chrNW_004936560:2,796,697...2,829,650
G
Nfatc3
nuclear factor of activated T cells 3
acts_upstream_of_or_within
ISO
(PMID:9768749)
MGI
PMID:9768749
NCBI chrNW_004936475:18,462,424...18,557,832
Ensembl chrNW_004936475:18,462,298...18,555,220
G
Nr1h3
nuclear receptor subfamily 1 group H member 3
ISO
RGD
PMID:17341476
RGD:401827282
NCBI chrNW_004936562:1,937,665...1,946,680
Ensembl chrNW_004936562:1,937,667...1,946,669
G
Pax1
paired box 1
involved_in acts_upstream_of_or_within
IEA ISO
(PMID:11476574)
Ensembl MGI
PMID:11476574
GO_REF:0000107
NCBI chrNW_004936620:3,765,481...3,773,779
Ensembl chrNW_004936620:3,765,444...3,776,467
G
Pbx1
PBX homeobox 1
involved_in acts_upstream_of_or_within
IEA ISO
(PMID:15581866)
Ensembl MGI
PMID:15581866
GO_REF:0000107
NCBI chrNW_004936481:20,200,236...20,440,623
Ensembl chrNW_004936481:20,203,405...20,440,629
G
Prdx2
peroxiredoxin 2
acts_upstream_of_or_within
ISO
(PMID:15259009)
MGI
PMID:15259009
NCBI chrNW_004936659:1,894,423...1,897,690
G
Prkdc
protein kinase, DNA-activated, catalytic subunit
ISO
RGD
PMID:22981234
RGD:8696027
NCBI chrNW_004936590:4,722,914...4,887,615
Ensembl chrNW_004936590:4,722,873...4,890,156
G
Psen1
presenilin 1
acts_upstream_of_or_within involved_in
ISO IEA
(PMID:17698590)
MGI Ensembl
PMID:17698590
GO_REF:0000107
NCBI chrNW_004936488:2,464,623...2,528,807
Ensembl chrNW_004936488:2,464,527...2,530,065
G
Psen2
presenilin 2
acts_upstream_of_or_within
ISO
(PMID:17698590)
MGI
PMID:17698590
NCBI chrNW_004936526:3,584,194...3,611,719
Ensembl chrNW_004936526:3,584,188...3,614,074
G
Psmb9
proteasome 20S subunit beta 9
ISO
RGD
PMID:18457575
RGD:9850287
NCBI chrNW_004936476:25,894,313...25,899,132
Ensembl chrNW_004936476:25,894,027...25,899,319
G
Raf1
Raf-1 proto-oncogene, serine/threonine kinase
involved_in acts_upstream_of_or_within
IEA ISO
(PMID:18952847)
Ensembl MGI
PMID:18952847
GO_REF:0000107
NCBI chrNW_004936602:1,089,979...1,114,376
Ensembl chrNW_004936602:1,051,205...1,117,096
G
Rag1
recombination activating 1
acts_upstream_of_or_within involved_in
ISO IEA
(PMID:18684012)
MGI Ensembl
PMID:18684012
GO_REF:0000107
NCBI chrNW_004936533:1,817,135...1,827,393
Ensembl chrNW_004936533:1,817,135...1,827,393
G
Ripk3
receptor interacting serine/threonine kinase 3
involved_in
IEA ISS
Ensembl UniProt
GO_REF:0000024 GO_REF:0000107
NCBI chrNW_004936722:209,019...212,817
Ensembl chrNW_004936722:209,013...212,839
G
Shh
sonic hedgehog signaling molecule
involved_in
IEA
Ensembl
GO_REF:0000107
NCBI chrNW_004936527:10,033,095...10,042,713
Ensembl chrNW_004936527:10,033,299...10,042,599
G
Six1
SIX homeobox 1
involved_in acts_upstream_of_or_within
IEA ISO
(PMID:16530750)
Ensembl MGI
PMID:16530750
GO_REF:0000107
NCBI chrNW_004936495:4,839,496...4,842,906
Ensembl chrNW_004936495:4,838,051...4,842,994
G
Six4
SIX homeobox 4
acts_upstream_of_or_within involved_in
ISO IEA
(PMID:16530750)
MGI Ensembl
PMID:16530750
GO_REF:0000107
NCBI chrNW_004936495:4,887,718...4,900,198
Ensembl chrNW_004936495:4,887,718...4,900,198
G
Slc46a2
solute carrier family 46 member 2
involved_in acts_upstream_of_or_within
IEA ISO
(PMID:18684012)
Ensembl MGI
PMID:18684012
GO_REF:0000107
NCBI chrNW_004936559:670,239...674,061
Ensembl chrNW_004936559:670,231...679,766
G
Srf
serum response factor
acts_upstream_of_or_within involved_in
ISO IEA
(PMID:18952847)
MGI Ensembl
PMID:18952847
GO_REF:0000107
NCBI chrNW_004936476:16,779,941...16,789,499
Ensembl chrNW_004936476:16,782,233...16,789,130
G
Tbx1
T-box transcription factor 1
involved_in acts_upstream_of_or_within
ISO
(PMID:31412026) (PMID:17916582) (PMID:14585638)
UniProt MGI
PMID:14585638 PMID:17916582 PMID:31412026
NCBI chrNW_004936619:3,662,567...3,670,470
Ensembl chrNW_004936619:3,664,468...3,670,525
G
Tgfbr1
transforming growth factor beta receptor 1
involved_in acts_upstream_of_or_within
IEA ISO
(PMID:17078885)
Ensembl MGI
PMID:17078885
GO_REF:0000107
NCBI chrNW_004936524:7,656,523...7,680,043
Ensembl chrNW_004936524:7,655,847...7,681,097
G
Tyr
tyrosinase
acts_upstream_of_or_within involved_in
ISO IEA
(PMID:10890980)
MGI Ensembl
PMID:10890980
GO_REF:0000107
NCBI chrNW_004936736:421,623...519,085
Ensembl chrNW_004936736:421,598...519,253
G
Zbtb1
zinc finger and BTB domain containing 1
involved_in
ISO
(PMID:22201126)
UniProt
PMID:22201126
NCBI chrNW_004936495:8,212,136...8,238,876
G
Zmpste24
zinc metallopeptidase STE24
involved_in acts_upstream_of_or_within
IEA ISO
(PMID:11923874)
Ensembl MGI
PMID:11923874
GO_REF:0000107
NCBI chrNW_004936474:22,035,059...22,077,846
Ensembl chrNW_004936474:22,034,801...22,077,986
G
Aire
autoimmune regulator
involved_in
IEA
Ensembl
GO_REF:0000107
NCBI chrNW_004936500:125,589...137,071
Ensembl chrNW_004936500:125,795...137,056
G
Foxn1
forkhead box N1
involved_in
IEA
Ensembl
GO_REF:0000107
NCBI chrNW_004936538:4,717,509...4,745,504
Ensembl chrNW_004936538:4,731,958...4,744,796
G
C3
complement C3
ISO
RGD
PMID:16555329
RGD:5129541
NCBI chrNW_004936588:3,985,732...4,023,221
G
Ccr4
C-C motif chemokine receptor 4
acts_upstream_of_or_within
ISO
(PMID:15809349)
MGI
PMID:15809349
NCBI chrNW_004936473:23,321,167...23,323,075
G
Foxp3
forkhead box P3
involved_in acts_upstream_of_or_within
IEA ISO
(PMID:15809349)
Ensembl MGI
PMID:15809349
GO_REF:0000107
NCBI chrNW_004936721:1,118,376...1,125,282
Ensembl chrNW_004936721:1,118,782...1,132,308
G
Acod1
aconitate decarboxylase 1
involved_in
IEA
Ensembl
GO_REF:0000107
NCBI chrNW_004936511:4,322,198...4,326,562
Ensembl chrNW_004936511:4,322,198...4,329,686
G
Tnfaip3
TNF alpha induced protein 3
involved_in
IEA
Ensembl
GO_REF:0000107
NCBI chrNW_004936560:5,124,955...5,138,988
Ensembl chrNW_004936560:5,128,843...5,138,345
G
C3ar1
complement C3a receptor 1
ISO
RGD
PMID:12514742
RGD:5129547
NCBI chrNW_004936892:347,547...355,143
Ensembl chrNW_004936892:347,842...349,296
G
Foxp3
forkhead box P3
involved_in acts_upstream_of_or_within
IEA ISO
(PMID:15780990)
Ensembl MGI
PMID:15780990
GO_REF:0000107
NCBI chrNW_004936721:1,118,376...1,125,282
Ensembl chrNW_004936721:1,118,782...1,132,308
G
Lyn
LYN proto-oncogene, Src family tyrosine kinase
involved_in
IEA
Ensembl
GO_REF:0000107
NCBI chrNW_004936496:2,578,598...2,698,165
Ensembl chrNW_004936496:2,637,958...2,700,055
G
Tgfb1
transforming growth factor beta 1
involved_in acts_upstream_of_or_within
IEA ISO
(PMID:17481928)
Ensembl MGI
PMID:17481928
GO_REF:0000107
NCBI chrNW_004936661:3,742,080...3,758,266
Ensembl chrNW_004936661:3,742,066...3,758,272
G
Xkr8
XK related 8
acts_upstream_of_or_within involved_in
ISO IEA
(PMID:29440417)
MGI Ensembl
PMID:29440417
GO_REF:0000107
NCBI chrNW_004936474:12,180,741...12,187,904
Ensembl chrNW_004936474:12,180,424...12,187,876
G
Atm
ATM serine/threonine kinase
acts_upstream_of_or_within involved_in
ISO IEA
(PMID:23836881)
MGI Ensembl
PMID:23836881
GO_REF:0000107
NCBI chrNW_004936551:359,134...534,672
Ensembl chrNW_004936551:359,362...532,211
G
Dcaf1
DDB1 and CUL4 associated factor 1
involved_in
IEA
Ensembl
GO_REF:0000107
NCBI chrNW_004936529:2,786,252...2,856,516
Ensembl chrNW_004936529:2,786,252...2,856,967
G
Dclre1c
DNA cross-link repair 1C
involved_in acts_upstream_of_or_within
IEA ISO
(PMID:23836881)
Ensembl MGI
PMID:23836881
GO_REF:0000107
NCBI chrNW_004936613:1,467,797...1,501,107
Ensembl chrNW_004936613:1,470,365...1,501,138
G
Hmgb1
high mobility group box 1
involved_in
ISO
(PMID:9166431)
UniProt
PMID:9166431
NCBI chrNW_004936472:25,236,728...25,246,585
Ensembl chrNW_004936472:25,236,728...25,246,580
G
Lig1
DNA ligase 1
NOT|involved_in
ISO
(PMID:9809069)
UniProt
PMID:9809069
NCBI chrNW_004936664:2,242,916...2,276,286
Ensembl chrNW_004936664:2,242,897...2,276,715
G
Lig3
DNA ligase 3
NOT|involved_in
ISO
(PMID:9809069)
UniProt
PMID:9809069
NCBI chrNW_004936538:206,179...228,487
Ensembl chrNW_004936538:206,839...226,441
G
Lig4
DNA ligase 4
involved_in acts_upstream_of_or_within
IEA ISO
(PMID:10716994) (PMID:15194694)
Ensembl MGI
PMID:10716994 PMID:15194694
GO_REF:0000107
NCBI chrNW_004936472:3,861,833...3,867,943
Ensembl chrNW_004936472:3,861,866...3,867,933
G
Prkdc
protein kinase, DNA-activated, catalytic subunit
involved_in acts_upstream_of_or_within
IEA ISO
(PMID:23836881)
Ensembl MGI
PMID:23836881
GO_REF:0000107
NCBI chrNW_004936590:4,722,914...4,887,615
Ensembl chrNW_004936590:4,722,873...4,890,156
G
Rag1
recombination activating 1
involved_in acts_upstream_of_or_within
IEA ISO
(PMID:2360047)
TreeGrafter MGI UniProt Ensembl InterPro
PMID:2360047
GO_REF:0000002 GO_REF:0000104 GO_REF:0000107 GO_REF:0000118
NCBI chrNW_004936533:1,817,135...1,827,393
Ensembl chrNW_004936533:1,817,135...1,827,393
G
Rag2
recombination activating 2
involved_in acts_upstream_of_or_within
IEA ISO
(PMID:2360047)
TreeGrafter MGI Ensembl
PMID:2360047
GO_REF:0000107 GO_REF:0000118
NCBI chrNW_004936533:1,801,207...1,807,431
Ensembl chrNW_004936533:1,801,391...1,807,431
G
Xrcc4
X-ray repair cross complementing 4
acts_upstream_of_or_within
ISO
(PMID:10716994)
MGI
PMID:10716994
NCBI chrNW_004936469:2,248,367...2,495,215
Ensembl chrNW_004936469:2,248,039...2,495,226
G
Xrcc6
X-ray repair cross complementing 6
acts_upstream_of_or_within
ISO
(PMID:10716994)
MGI
PMID:10716994
NCBI chrNW_004936492:303,843...325,812
Ensembl chrNW_004936492:300,057...325,845
Term paths to the root one shortest all shortest one longest all longest one shortest and longest all