Send us a Message



Submit Data |  Help |  Video Tutorials |  News |  Publications |  Download |  REST API |  Citing RGD |  Contact   

ONTOLOGY REPORT - ANNOTATIONS


Term:immune system development
go back to main search page
Accession:GO:0002520 term browser browse the term
Definition:The process whose specific outcome is the progression of an organismal system whose objective is to provide calibrated responses by an organism to a potential internal or invasive threat, over time, from its formation to the mature structure. A system is a regularly interacting or interdependent group of organs or tissues that work together to carry out a given biological process.


GViewer not supported for the selected species.

show annotations for term's descendants           Sort by:
immune system development term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Bcl2 BCL2 apoptosis regulator involved_in
acts_upstream_of_or_within
IEA
ISO
(PMID:7812968)
(PMID:8372353)
Ensembl
MGI
PMID:7812968 PMID:8372353 GO_REF:0000107 NCBI chrNW_004936497:2,209,136...2,373,580
Ensembl chrNW_004936497:2,210,334...2,210,921
JBrowse link
G Cacna1c calcium voltage-gated channel subunit alpha1 C involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936606:2,168,104...2,867,560
Ensembl chrNW_004936606:2,168,625...2,865,758
JBrowse link
G Gata3 GATA binding protein 3 involved_in IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004936484:6,780,692...6,800,883
Ensembl chrNW_004936484:6,780,692...6,800,966
JBrowse link
G Ro60 Ro60, Y RNA binding protein involved_in
acts_upstream_of_or_within
IEA
ISO
(PMID:12788971) Ensembl
MGI
PMID:12788971 GO_REF:0000107 NCBI chrNW_004936638:1,289,452...1,320,522
Ensembl chrNW_004936638:1,304,048...1,317,948
JBrowse link
G Smad3 SMAD family member 3 involved_in
acts_upstream_of_or_within
IEA
ISO
(PMID:15183723) Ensembl
MGI
PMID:15183723 GO_REF:0000107 NCBI chrNW_004936471:27,080,662...27,185,861
Ensembl chrNW_004936471:27,080,575...27,189,793
JBrowse link
bone marrow development term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Asxl1 ASXL transcriptional regulator 1 involved_in
acts_upstream_of_or_within
IEA
ISO
(PMID:19861679) Ensembl
MGI
PMID:19861679 GO_REF:0000107 NCBI chrNW_004936485:19,218,494...19,297,188
Ensembl chrNW_004936485:19,227,400...19,298,912
JBrowse link
G Ctc1 CST telomere replication complex component 1 involved_in
acts_upstream_of_or_within
IEA
ISO
(PMID:22531781) Ensembl
MGI
PMID:22531781 GO_REF:0000107 NCBI chrNW_004936595:1,456,911...1,476,331
Ensembl chrNW_004936595:1,454,508...1,476,593
JBrowse link
G Fancb FA complementation group B acts_upstream_of_or_within ISO (PMID:26658157) MGI PMID:26658157 NCBI chrNW_004936470:4,305,220...4,323,456
Ensembl chrNW_004936470:4,305,740...4,323,374
JBrowse link
G Hoxb4 homeobox B4 involved_in
acts_upstream_of_or_within
IEA
ISO
(PMID:14962901) Ensembl
MGI
PMID:14962901 GO_REF:0000107 NCBI chrNW_004936490:12,808,679...12,811,688
Ensembl chrNW_004936490:12,808,679...12,811,688
JBrowse link
G LOC101960702 lysosomal acid lipase/cholesteryl ester hydrolase involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936601:4,975,296...5,008,938
Ensembl chrNW_004936601:4,975,211...5,008,962
JBrowse link
G Lrp5 LDL receptor related protein 5 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936599:1,746,309...1,814,471
Ensembl chrNW_004936599:1,746,406...1,814,321
JBrowse link
G Lrrc17 leucine rich repeat containing 17 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936479:20,392,485...20,423,209
Ensembl chrNW_004936479:20,392,523...20,423,281
JBrowse link
G Ptprc protein tyrosine phosphatase receptor type C involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936567:5,266,653...5,378,464
Ensembl chrNW_004936567:5,267,615...5,378,258
JBrowse link
G Sbds SBDS ribosome maturation factor involved_in ISO (PMID:15342903) UniProt PMID:15342903 NCBI chrNW_004936543:7,324,748...7,329,774 JBrowse link
G Tp53 tumor protein p53 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936595:919,807...935,367
Ensembl chrNW_004936595:919,428...925,425
JBrowse link
central tolerance induction term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Foxj1 forkhead box J1 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936594:1,284,799...1,288,898
Ensembl chrNW_004936594:1,284,781...1,289,361
JBrowse link
central tolerance induction to self antigen term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Aire autoimmune regulator involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936500:125,589...137,071
Ensembl chrNW_004936500:125,795...137,056
JBrowse link
hematopoietic or lymphoid organ development term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Asxl1 ASXL transcriptional regulator 1 acts_upstream_of_or_within
involved_in
ISO
IEA
(PMID:19861679) MGI
Ensembl
PMID:19861679 GO_REF:0000107 NCBI chrNW_004936485:19,218,494...19,297,188
Ensembl chrNW_004936485:19,227,400...19,298,912
JBrowse link
G Ltbr lymphotoxin beta receptor involved_in IEA InterPro GO_REF:0000002 NCBI chrNW_004936709:1,362,846...1,369,287
Ensembl chrNW_004936709:1,362,840...1,369,365
JBrowse link
immunoglobulin heavy chain V-D-J recombination term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Polb DNA polymerase beta involved_in
acts_upstream_of_or_within
IEA
ISO
(PMID:24388753) Ensembl
MGI
PMID:24388753 GO_REF:0000107 NCBI chrNW_004936785:324,655...350,496
Ensembl chrNW_004936785:323,941...350,539
JBrowse link
G Yy1 YY1 transcription factor involved_in ISO (PMID:23531880) MGI PMID:23531880 NCBI chrNW_004936604:3,911,407...3,945,405 JBrowse link
immunoglobulin V(D)J recombination term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Cyren cell cycle regulator of NHEJ involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936579:768,153...776,053
Ensembl chrNW_004936579:768,252...770,440
JBrowse link
G Foxp1 forkhead box P1 acts_upstream_of_or_within ISO (PMID:16819554) MGI PMID:16819554 NCBI chrNW_004936603:2,631,781...3,146,104
Ensembl chrNW_004936603:2,632,274...2,830,324
JBrowse link
G Lig4 DNA ligase 4 involved_in
acts_upstream_of_or_within
IEA
ISO
(PMID:9823897) Ensembl
MGI
TreeGrafter
PMID:9823897 GO_REF:0000107 GO_REF:0000118 NCBI chrNW_004936472:3,861,833...3,867,943
Ensembl chrNW_004936472:3,861,866...3,867,933
JBrowse link
G Nhej1 non-homologous end joining factor 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936569:1,494,783...1,578,587
Ensembl chrNW_004936569:1,495,446...1,578,590
JBrowse link
G Prkdc protein kinase, DNA-activated, catalytic subunit involved_in
acts_upstream_of_or_within
IEA
ISO
(PMID:9768755) TreeGrafter
MGI
Ensembl
PMID:9768755 GO_REF:0000107 GO_REF:0000118 NCBI chrNW_004936590:4,722,914...4,887,615
Ensembl chrNW_004936590:4,722,873...4,890,156
JBrowse link
G Tcf3 transcription factor 3 acts_upstream_of_or_within
involved_in
ISO
IEA
(PMID:16428437) MGI
Ensembl
TreeGrafter
PMID:16428437 GO_REF:0000107 GO_REF:0000118 NCBI chrNW_004936588:884,817...913,052
Ensembl chrNW_004936588:884,789...912,753
JBrowse link
G Xrcc4 X-ray repair cross complementing 4 involved_in
acts_upstream_of_or_within
IEA
ISO
(PMID:9875844) TreeGrafter
MGI
PMID:9875844 GO_REF:0000118 NCBI chrNW_004936469:2,248,367...2,495,215
Ensembl chrNW_004936469:2,248,039...2,495,226
JBrowse link
isotype switching term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Aicda activation induced cytidine deaminase acts_upstream_of_or_within
involved_in
ISO
IEA
(PMID:17713479) MGI
Ensembl
PMID:17713479 GO_REF:0000107 NCBI chrNW_004936870:25,039...34,601
Ensembl chrNW_004936870:25,039...34,601
JBrowse link
G Atad5 ATPase family AAA domain containing 5 involved_in
acts_upstream_of
IEA
ISO
(PMID:25404367) Ensembl
MGI
PMID:25404367 GO_REF:0000107 NCBI chrNW_004936538:2,815,370...2,877,084
Ensembl chrNW_004936538:2,811,174...2,874,113
JBrowse link
G Batf basic leucine zipper ATF-like transcription factor involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936488:4,607,716...4,631,237
Ensembl chrNW_004936488:4,607,716...4,631,283
JBrowse link
G Cd40lg CD40 ligand involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936513:10,607,617...10,620,403
Ensembl chrNW_004936513:10,607,617...10,620,403
JBrowse link
G Ercc1 ERCC excision repair 1, endonuclease non-catalytic subunit acts_upstream_of_or_within
involved_in
ISO
IEA
(PMID:15280420) MGI
Ensembl
PMID:15280420 GO_REF:0000107 NCBI chrNW_004936706:1,854,938...1,867,521
Ensembl chrNW_004936706:1,852,359...1,867,745
JBrowse link
G Exo1 exonuclease 1 acts_upstream_of_or_within ISO (PMID:14716311) MGI PMID:14716311 NCBI chrNW_004936526:8,570,488...8,627,004 JBrowse link
G Exosc3 exosome component 3 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936524:5,580,855...5,586,170
Ensembl chrNW_004936524:5,581,090...5,586,128
JBrowse link
G Exosc6 exosome component 6 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936475:23,295,441...23,297,321
Ensembl chrNW_004936475:23,295,500...23,296,318
JBrowse link
G Lig4 DNA ligase 4 involved_in
acts_upstream_of_or_within
IEA
ISO
(PMID:17713479) Ensembl
MGI
PMID:17713479 GO_REF:0000107 NCBI chrNW_004936472:3,861,833...3,867,943
Ensembl chrNW_004936472:3,861,866...3,867,933
JBrowse link
G Mlh1 mutL homolog 1 involved_in
acts_upstream_of_or_within
IEA
ISO
(PMID:12743174) Ensembl
MGI
PMID:12743174 GO_REF:0000107 NCBI chrNW_004936473:26,556,636...26,600,830
Ensembl chrNW_004936473:26,556,611...26,603,736
JBrowse link
G Msh2 mutS homolog 2 involved_in
acts_upstream_of_or_within
IEA
ISO
(PMID:12743174)
(PMID:10430621)
Ensembl
MGI
PMID:10430621 PMID:12743174 GO_REF:0000107 NCBI chrNW_004936508:4,943,987...5,013,356
Ensembl chrNW_004936508:4,944,007...5,013,356
JBrowse link
G Msh6 mutS homolog 6 acts_upstream_of_or_within
involved_in
ISO
IEA
(PMID:16618598)
(PMID:17015724)
MGI
Ensembl
PMID:16618598 PMID:17015724 GO_REF:0000107 NCBI chrNW_004936508:4,708,661...4,728,671
Ensembl chrNW_004936508:4,708,661...4,728,787
JBrowse link
G Nbn nibrin involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936544:3,773,828...3,812,673
Ensembl chrNW_004936544:3,775,220...3,808,837
JBrowse link
G Nfkbiz NFKB inhibitor zeta involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936630:1,601,006...1,633,844
Ensembl chrNW_004936630:1,601,010...1,632,745
JBrowse link
G Pcyt1a phosphate cytidylyltransferase 1A, choline involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936784:884,751...938,901
Ensembl chrNW_004936784:884,751...938,282
JBrowse link
G Rnf168 ring finger protein 168 involved_in ISO (PMID:20080757) UniProt PMID:20080757 NCBI chrNW_004936784:1,073,236...1,094,575 JBrowse link
G Rnf8 ring finger protein 8 involved_in ISO (PMID:20080757) UniProt PMID:20080757 NCBI chrNW_004936476:22,074,146...22,121,286 JBrowse link
G Sanbr SANT and BTB domain regulator of CSR involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936491:6,578,538...6,629,610
Ensembl chrNW_004936491:6,578,484...6,630,513
JBrowse link
G Swap70 switching B cell complex subunit SWAP70 acts_upstream_of_or_within
involved_in
ISO
IEA
(PMID:9642267) MGI
Ensembl
PMID:9642267 GO_REF:0000107 NCBI chrNW_004936528:8,441,839...8,511,374
Ensembl chrNW_004936528:8,441,527...8,511,376
JBrowse link
G Ung uracil DNA glycosylase involved_in
acts_upstream_of_or_within
IEA
ISO
(PMID:17015724) Ensembl
MGI
PMID:17015724 GO_REF:0000107 NCBI chrNW_004936769:911,296...922,770
Ensembl chrNW_004936769:910,838...922,726
JBrowse link
G Xrcc4 X-ray repair cross complementing 4 acts_upstream_of_or_within ISO (PMID:17713479) MGI PMID:17713479 NCBI chrNW_004936469:2,248,367...2,495,215
Ensembl chrNW_004936469:2,248,039...2,495,226
JBrowse link
isotype switching to IgA isotypes term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ccr6 C-C motif chemokine receptor 6 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936489:16,669,297...16,689,451
Ensembl chrNW_004936489:16,669,297...16,689,451
JBrowse link
isotype switching to IgE isotypes term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Bcl6 BCL6 transcription repressor involved_in
acts_upstream_of
IEA
ISO
(PMID:10490661) Ensembl
MGI
PMID:10490661 GO_REF:0000107 NCBI chrNW_004936578:2,371,976...2,395,034
Ensembl chrNW_004936578:2,371,945...2,395,071
JBrowse link
G Foxp3 forkhead box P3 involved_in
acts_upstream_of
IEA
ISO
(PMID:16275384) Ensembl
MGI
PMID:16275384 GO_REF:0000107 NCBI chrNW_004936721:1,118,376...1,125,282
Ensembl chrNW_004936721:1,118,782...1,132,308
JBrowse link
G Stat6 signal transducer and activator of transcription 6 involved_in
acts_upstream_of
IEA
ISO
(PMID:10490661) Ensembl
MGI
PMID:10490661 GO_REF:0000107 NCBI chrNW_004936646:1,297,530...1,312,508
Ensembl chrNW_004936646:1,296,290...1,312,157
JBrowse link
isotype switching to IgG isotypes term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Hspd1 heat shock protein family D (Hsp60) member 1 involved_in ISO (PMID:16148103) BHF-UCL PMID:16148103 NCBI chrNW_004936506:1,678,069...1,687,632 JBrowse link
lymph node development term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ccl21 C-C motif chemokine ligand 21 acts_upstream_of_or_within ISO (PMID:12732660) MGI PMID:12732660 NCBI chrNW_004936524:2,787,963...2,789,116
Ensembl chrNW_004936524:2,788,341...2,789,016
JBrowse link
G Cd248 CD248 molecule acts_upstream_of_or_within ISO (PMID:20432232) MGI PMID:20432232 NCBI chrNW_004936599:3,284,695...3,287,022 JBrowse link
G Cd2ap CD2 associated protein involved_in
acts_upstream_of_or_within
IEA
ISO
(PMID:24218450) Ensembl
MGI
PMID:24218450 GO_REF:0000107 NCBI chrNW_004936476:12,890,595...12,989,046
Ensembl chrNW_004936476:12,890,468...12,987,843
JBrowse link
G Cxcl13 C-X-C motif chemokine ligand 13 acts_upstream_of_or_within
involved_in
ISO (PMID:12732660)
(PMID:19783990)
MGI
BHF-UCL
PMID:12732660 PMID:19783990 NCBI chrNW_004936676:1,309,625...1,314,532
Ensembl chrNW_004936676:1,309,625...1,313,933
JBrowse link
G Cxcr5 C-X-C motif chemokine receptor 5 involved_in
acts_upstream_of_or_within
IEA
ISO
(PMID:12732660) InterPro
MGI
Ensembl
PMID:12732660 GO_REF:0000002 GO_REF:0000107 NCBI chrNW_004936542:3,860,536...3,872,528
Ensembl chrNW_004936542:3,860,536...3,872,116
JBrowse link
G Fadd Fas associated via death domain involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936599:633,501...639,412
Ensembl chrNW_004936599:633,330...639,456
JBrowse link
G Flt3 fms related receptor tyrosine kinase 3 acts_upstream_of_or_within ISO (PMID:20457904) MGI PMID:20457904 NCBI chrNW_004936472:23,169,967...23,239,178
Ensembl chrNW_004936472:23,170,470...23,256,904
JBrowse link
G Ikzf1 IKAROS family zinc finger 1 acts_upstream_of_or_within ISO (PMID:7923373) MGI PMID:7923373 NCBI chrNW_004936686:1,459,582...1,556,478
Ensembl chrNW_004936686:1,462,145...1,556,451
JBrowse link
G Il15 interleukin 15 acts_upstream_of_or_within ISO (PMID:10704459) MGI PMID:10704459 NCBI chrNW_004936535:6,344,348...6,358,803
Ensembl chrNW_004936535:6,344,395...6,350,197
JBrowse link
G Il7r interleukin 7 receptor acts_upstream_of_or_within ISO (PMID:12732660) MGI PMID:12732660 NCBI chrNW_004936518:5,815,820...5,842,571 JBrowse link
G Lta lymphotoxin alpha acts_upstream_of_or_within
involved_in
ISO
IEA
(PMID:9565643)
(PMID:8171322)
(PMID:9368616)
(PMID:10415063)
(PMID:7636227)
MGI
Ensembl
PMID:7636227 PMID:8171322 PMID:9368616 PMID:9565643 PMID:10415063 GO_REF:0000107 NCBI chrNW_004936727:1,940,081...1,941,022
Ensembl chrNW_004936727:1,940,081...1,941,022
JBrowse link
G Ltb lymphotoxin beta acts_upstream_of_or_within
involved_in
ISO
IEA
(PMID:9256477)
(PMID:9133428)
MGI
Ensembl
PMID:9133428 PMID:9256477 GO_REF:0000107 NCBI chrNW_004936727:1,929,533...1,932,339
Ensembl chrNW_004936727:1,910,881...1,932,356
JBrowse link
G Nkx2-3 NK2 homeobox 3 involved_in
acts_upstream_of_or_within
IEA
ISO
(PMID:10790368)
(PMID:10926756)
Ensembl
MGI
PMID:10790368 PMID:10926756 GO_REF:0000107 NCBI chrNW_004936636:529,669...532,237
Ensembl chrNW_004936636:529,669...532,237
JBrowse link
G Pdpn podoplanin involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936474:1,751,159...1,779,011
Ensembl chrNW_004936474:1,750,944...1,781,156
JBrowse link
G Polb DNA polymerase beta acts_upstream_of_or_within
involved_in
ISO
IEA
(PMID:24388753) MGI
Ensembl
PMID:24388753 GO_REF:0000107 NCBI chrNW_004936785:324,655...350,496
Ensembl chrNW_004936785:323,941...350,539
JBrowse link
G Rc3h1 ring finger and CCCH-type domains 1 acts_upstream_of_or_within
involved_in
ISO
IEA
(PMID:23583643) MGI
Ensembl
PMID:23583643 GO_REF:0000107 NCBI chrNW_004936481:13,919,006...13,973,868
Ensembl chrNW_004936481:13,919,257...13,966,677
JBrowse link
G Rc3h2 ring finger and CCCH-type domains 2 involved_in
acts_upstream_of_or_within
IEA
ISO
(PMID:23583643) Ensembl
MGI
PMID:23583643 GO_REF:0000107 NCBI chrNW_004936487:11,341,663...11,393,275
Ensembl chrNW_004936487:11,341,700...11,389,859
JBrowse link
G Rcbtb2 RCC1 and BTB domain containing protein 2 involved_in
acts_upstream_of_or_within
IEA
ISO
(PMID:26291700) Ensembl
MGI
PMID:26291700 GO_REF:0000107 NCBI chrNW_004936565:1,750,565...1,789,779
Ensembl chrNW_004936565:1,750,105...1,789,737
JBrowse link
G Ripk3 receptor interacting serine/threonine kinase 3 involved_in ISS
IEA
UniProt
Ensembl
GO_REF:0000024 GO_REF:0000107 NCBI chrNW_004936722:209,019...212,817
Ensembl chrNW_004936722:209,013...212,839
JBrowse link
G Rorc RAR related orphan receptor C involved_in
acts_upstream_of_or_within
ISO (PMID:14691482) UniProt
MGI
PMID:14691482 NCBI chrNW_004936580:1,997,640...2,020,649
Ensembl chrNW_004936580:1,997,640...2,020,649
JBrowse link
G Spns2 SPNS lysolipid transporter 2, sphingosine-1-phosphate involved_in
acts_upstream_of_or_within
IEA
ISO
(PMID:23180825) Ensembl
MGI
PMID:23180825 GO_REF:0000107 NCBI chrNW_004936677:1,058,601...1,093,233
Ensembl chrNW_004936677:1,058,595...1,093,147
JBrowse link
G Tgfb1 transforming growth factor beta 1 acts_upstream_of_or_within
involved_in
ISO
IEA
(PMID:1436033) MGI
Ensembl
PMID:1436033 GO_REF:0000107 NCBI chrNW_004936661:3,742,080...3,758,266
Ensembl chrNW_004936661:3,742,066...3,758,272
JBrowse link
G Tnfrsf11a TNF receptor superfamily member 11a involved_in
acts_upstream_of_or_within
IEA
ISO
(PMID:10500098) TreeGrafter
MGI
Ensembl
PMID:10500098 GO_REF:0000107 GO_REF:0000118 NCBI chrNW_004936497:2,944,841...2,986,113
Ensembl chrNW_004936497:2,945,010...2,995,207
JBrowse link
G Tox thymocyte selection associated high mobility group box acts_upstream_of_or_within
involved_in
ISO
IEA
(PMID:20818394) MGI
Ensembl
PMID:20818394 GO_REF:0000107 NCBI chrNW_004936496:13,847,210...14,146,110
Ensembl chrNW_004936496:13,847,210...14,147,886
JBrowse link
G Traf3ip2 TRAF3 interacting protein 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936679:308,508...348,561
Ensembl chrNW_004936679:316,277...336,557
JBrowse link
mucosa-associated lymphoid tissue development term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Nkx2-3 NK2 homeobox 3 acts_upstream_of_or_within
involved_in
ISO
IEA
(PMID:10926756) MGI
Ensembl
PMID:10926756 GO_REF:0000107 NCBI chrNW_004936636:529,669...532,237
Ensembl chrNW_004936636:529,669...532,237
JBrowse link
G Rorc RAR related orphan receptor C acts_upstream_of_or_within ISO (PMID:15247480) MGI PMID:15247480 NCBI chrNW_004936580:1,997,640...2,020,649
Ensembl chrNW_004936580:1,997,640...2,020,649
JBrowse link
natural killer cell tolerance induction term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Havcr2 hepatitis A virus cellular receptor 2 involved_in ISO (PMID:25578313) UniProt PMID:25578313 NCBI chrNW_004936515:6,001,324...6,015,407 JBrowse link
G Lgals9 galectin 9 involved_in ISO (PMID:25578313) UniProt PMID:25578313 NCBI chrNW_004936538:4,034,467...4,050,240 JBrowse link
negative regulation of isotype switching term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Parp3 poly(ADP-ribose) polymerase family member 3 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936529:3,291,282...3,297,581
Ensembl chrNW_004936529:3,291,269...3,299,992
JBrowse link
negative regulation of isotype switching to IgE isotypes term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Bcl6 BCL6 transcription repressor involved_in
acts_upstream_of_or_within
IEA
ISO
(PMID:10490661) Ensembl
MGI
PMID:10490661 GO_REF:0000107 NCBI chrNW_004936578:2,371,976...2,395,034
Ensembl chrNW_004936578:2,371,945...2,395,071
JBrowse link
G Foxp3 forkhead box P3 involved_in
acts_upstream_of_or_within
IEA
ISO
(PMID:16275384) Ensembl
MGI
PMID:16275384 GO_REF:0000107 NCBI chrNW_004936721:1,118,376...1,125,282
Ensembl chrNW_004936721:1,118,782...1,132,308
JBrowse link
G Ndfip1 Nedd4 family interacting protein 1 acts_upstream_of_or_within ISO (PMID:17137798) MGI PMID:17137798 NCBI chrNW_004936504:12,053,470...12,103,346 JBrowse link
negative regulation of T cell anergy term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Cd86 CD86 molecule ISO RGD PMID:18424705 RGD:4892228 NCBI chrNW_004936536:8,414,491...8,481,712 JBrowse link
negative regulation of tolerance induction term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Pdcd1 programmed cell death 1 acts_upstream_of_or_within
involved_in
ISO
IEA
(PMID:23636058) MGI
Ensembl
PMID:23636058 GO_REF:0000107 NCBI chrNW_004936745:152,571...163,712
Ensembl chrNW_004936745:152,612...161,587
JBrowse link
peripheral T cell tolerance induction term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Aire autoimmune regulator involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936500:125,589...137,071
Ensembl chrNW_004936500:125,795...137,056
JBrowse link
Peyer's patch development term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ada adenosine deaminase acts_upstream_of_or_within ISO (PMID:10720488) MGI PMID:10720488 NCBI chrNW_004936530:2,217,713...2,224,070 JBrowse link
G Cacnb4 calcium voltage-gated channel auxiliary subunit beta 4 involved_in
acts_upstream_of_or_within
IEA
ISO
(PMID:5037658) Ensembl
MGI
PMID:5037658 GO_REF:0000107 NCBI chrNW_004936469:25,494,820...25,745,783
Ensembl chrNW_004936469:25,494,883...25,740,223
JBrowse link
G Id2 inhibitor of DNA binding 2 acts_upstream_of_or_within ISO (PMID:17452521) MGI PMID:17452521 NCBI chrNW_004936532:5,236,175...5,238,689
Ensembl chrNW_004936532:5,236,037...5,238,881
JBrowse link
G Ikzf1 IKAROS family zinc finger 1 acts_upstream_of_or_within ISO (PMID:7923373) MGI PMID:7923373 NCBI chrNW_004936686:1,459,582...1,556,478
Ensembl chrNW_004936686:1,462,145...1,556,451
JBrowse link
G LOC101954516 signal transducer and activator of transcription 5B acts_upstream_of_or_within
involved_in
ISO
IEA
(PMID:15294943) MGI
Ensembl
PMID:15294943 GO_REF:0000107 NCBI chrNW_004936490:17,022,268...17,043,751
Ensembl chrNW_004936490:17,021,051...17,043,941
JBrowse link
G Nkx2-3 NK2 homeobox 3 involved_in
acts_upstream_of_or_within
IEA
ISO
(PMID:10790368) Ensembl
MGI
PMID:10790368 GO_REF:0000107 NCBI chrNW_004936636:529,669...532,237
Ensembl chrNW_004936636:529,669...532,237
JBrowse link
G Rorc RAR related orphan receptor C involved_in ISO (PMID:14691482) UniProt PMID:14691482 NCBI chrNW_004936580:1,997,640...2,020,649
Ensembl chrNW_004936580:1,997,640...2,020,649
JBrowse link
G Tcf3 transcription factor 3 acts_upstream_of_or_within ISO (PMID:17452521) MGI PMID:17452521 NCBI chrNW_004936588:884,817...913,052
Ensembl chrNW_004936588:884,789...912,753
JBrowse link
G Tox thymocyte selection associated high mobility group box involved_in
acts_upstream_of_or_within
IEA
ISO
(PMID:20818394) Ensembl
MGI
PMID:20818394 GO_REF:0000107 NCBI chrNW_004936496:13,847,210...14,146,110
Ensembl chrNW_004936496:13,847,210...14,147,886
JBrowse link
Peyer's patch morphogenesis term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Artn artemin involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936474:25,252,510...25,254,221
Ensembl chrNW_004936474:25,252,684...25,253,810
JBrowse link
G Foxl1 forkhead box L1 involved_in
acts_upstream_of_or_within
IEA
ISO
(PMID:12648490) Ensembl
MGI
PMID:12648490 GO_REF:0000107 NCBI chrNW_004936641:2,226,489...2,227,613
Ensembl chrNW_004936641:2,226,550...2,227,578
JBrowse link
G Ret ret proto-oncogene involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936617:2,927,185...2,980,594
Ensembl chrNW_004936617:2,927,155...2,980,602
JBrowse link
positive regulation of B cell tolerance induction term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Tgfbr2 transforming growth factor beta receptor 2 involved_in
acts_upstream_of_or_within
IEA
ISO
(PMID:16973387) Ensembl
MGI
PMID:16973387 GO_REF:0000107 NCBI chrNW_004936473:21,324,669...21,409,430
Ensembl chrNW_004936473:21,324,658...21,409,430
JBrowse link
positive regulation of central B cell tolerance induction term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Foxj1 forkhead box J1 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936594:1,284,799...1,288,898
Ensembl chrNW_004936594:1,284,781...1,289,361
JBrowse link
positive regulation of interleukin-4-dependent isotype switching to IgE isotypes term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Tnfsf4 TNF superfamily member 4 involved_in ISO (PMID:12496423) BHF-UCL PMID:12496423 NCBI chrNW_004936481:14,391,359...14,409,514 JBrowse link
positive regulation of isotype switching term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Exosc3 exosome component 3 acts_upstream_of_or_within
involved_in
ISO
IEA
(PMID:21255825) MGI
Ensembl
PMID:21255825 GO_REF:0000107 NCBI chrNW_004936524:5,580,855...5,586,170
Ensembl chrNW_004936524:5,581,090...5,586,128
JBrowse link
G Exosc6 exosome component 6 involved_in
acts_upstream_of_or_within
IEA
ISO
(PMID:21255825) Ensembl
MGI
PMID:21255825 GO_REF:0000107 NCBI chrNW_004936475:23,295,441...23,297,321
Ensembl chrNW_004936475:23,295,500...23,296,318
JBrowse link
G Hmces 5-hydroxymethylcytosine binding, ES cell specific involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936798:261,566...284,480
Ensembl chrNW_004936798:261,661...273,011
JBrowse link
G Kmt5b lysine methyltransferase 5B involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936599:1,928,172...1,983,983
Ensembl chrNW_004936599:1,928,145...1,984,008
JBrowse link
G Kmt5c lysine methyltransferase 5C involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936886:596,949...602,959
Ensembl chrNW_004936886:595,782...604,286
JBrowse link
G Mad2l2 mitotic arrest deficient 2 like 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936474:538,703...542,901
Ensembl chrNW_004936474:538,625...542,901
JBrowse link
G Paxip1 PAX interacting protein 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936527:9,440,129...9,488,215
Ensembl chrNW_004936527:9,440,036...9,484,245
JBrowse link
G Rif1 replication timing regulatory factor 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936469:26,045,500...26,105,980
Ensembl chrNW_004936469:26,048,953...26,105,997
JBrowse link
G Shld1 shieldin complex subunit 1 involved_in IEA TreeGrafter
Ensembl
GO_REF:0000107 GO_REF:0000118 NCBI chrNW_004936485:13,179,218...13,267,980
Ensembl chrNW_004936485:13,176,426...13,267,953
JBrowse link
G Shld2 shieldin complex subunit 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936601:5,315,297...5,400,752
Ensembl chrNW_004936601:5,315,261...5,396,301
JBrowse link
G Shld3 shieldin complex subunit 3 involved_in ISO (PMID:29656893) UniProt PMID:29656893
G Tfrc transferrin receptor involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936784:696,738...728,385
Ensembl chrNW_004936784:696,713...728,543
JBrowse link
G Tp53bp1 tumor protein p53 binding protein 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936471:6,589,395...6,668,242
Ensembl chrNW_004936471:6,589,564...6,668,305
JBrowse link
positive regulation of isotype switching to IgA isotypes term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Mlh1 mutL homolog 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936473:26,556,636...26,600,830
Ensembl chrNW_004936473:26,556,611...26,603,736
JBrowse link
G Msh2 mutS homolog 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936508:4,943,987...5,013,356
Ensembl chrNW_004936508:4,944,007...5,013,356
JBrowse link
G Nsd2 nuclear receptor binding SET domain protein 2 involved_in
acts_upstream_of_or_within
IEA
ISO
(PMID:23241889) Ensembl
MGI
PMID:23241889 GO_REF:0000107 NCBI chrNW_004936477:21,460,442...21,531,563
Ensembl chrNW_004936477:21,460,478...21,534,909
JBrowse link
G Pms2 PMS1 homolog 2, mismatch repair system component involved_in ISO (PMID:10430621) CAFA PMID:10430621 NCBI chrNW_004936750:439,396...468,747 JBrowse link
G Tgfb1 transforming growth factor beta 1 acts_upstream_of_or_within
involved_in
ISO
IEA
ISS
(PMID:14988498) MGI
Ensembl
AgBase
PMID:14988498 GO_REF:0000024 GO_REF:0000107 NCBI chrNW_004936661:3,742,080...3,758,266
Ensembl chrNW_004936661:3,742,066...3,758,272
JBrowse link
G Tnfsf13 TNF superfamily member 13 acts_upstream_of_or_within
involved_in
ISO
IEA
(PMID:14988498) MGI
Ensembl
TreeGrafter
PMID:14988498 GO_REF:0000107 GO_REF:0000118 NCBI chrNW_004936595:839,877...842,962
Ensembl chrNW_004936595:839,877...842,962
JBrowse link
positive regulation of isotype switching to IgE isotypes term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Clcf1 cardiotrophin like cytokine factor 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936599:2,372,889...2,376,316
Ensembl chrNW_004936599:2,372,031...2,376,939
JBrowse link
G Stat6 signal transducer and activator of transcription 6 involved_in
acts_upstream_of_or_within
IEA
ISO
(PMID:10490661) Ensembl
MGI
PMID:10490661 GO_REF:0000107 NCBI chrNW_004936646:1,297,530...1,312,508
Ensembl chrNW_004936646:1,296,290...1,312,157
JBrowse link
positive regulation of isotype switching to IgG isotypes term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Atad5 ATPase family AAA domain containing 5 involved_in
acts_upstream_of_or_within
IEA
ISO
(PMID:25404367) Ensembl
MGI
PMID:25404367 GO_REF:0000107 NCBI chrNW_004936538:2,815,370...2,877,084
Ensembl chrNW_004936538:2,811,174...2,874,113
JBrowse link
G Cd28 CD28 molecule involved_in
acts_upstream_of_or_within
IEA
ISO
(PMID:7688139) Ensembl
MGI
PMID:7688139 GO_REF:0000107 NCBI chrNW_004936631:335,411...363,407
Ensembl chrNW_004936631:335,411...363,407
JBrowse link
G Cd40 CD40 molecule involved_in
acts_upstream_of_or_within
IEA
ISO
(PMID:12882831) Ensembl
MGI
PMID:12882831 GO_REF:0000107 NCBI chrNW_004936514:6,936,915...6,947,246
Ensembl chrNW_004936514:6,936,572...6,947,280
JBrowse link
G Ifng interferon gamma acts_upstream_of_or_within ISO (PMID:12882831) MGI PMID:12882831 NCBI chrNW_004936545:6,139,130...6,144,543
Ensembl chrNW_004936545:6,139,116...6,148,452
JBrowse link
G Il2 interleukin 2 acts_upstream_of_or_within
involved_in
ISO
IEA
(PMID:1830926) MGI
Ensembl
PMID:1830926 GO_REF:0000107 NCBI chrNW_004936662:1,594,953...1,599,625
Ensembl chrNW_004936662:1,594,953...1,599,625
JBrowse link
G Mlh1 mutL homolog 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936473:26,556,636...26,600,830
Ensembl chrNW_004936473:26,556,611...26,603,736
JBrowse link
G Msh2 mutS homolog 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936508:4,943,987...5,013,356
Ensembl chrNW_004936508:4,944,007...5,013,356
JBrowse link
G Pagr1 PAXIP1 associated glutamate rich protein 1 involved_in ISO (PMID:26744420) UniProt PMID:26744420 NCBI chrNW_004936501:12,657,092...12,660,106
Ensembl chrNW_004936501:12,656,435...12,660,067
JBrowse link
G Paxip1 PAX interacting protein 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936527:9,440,129...9,488,215
Ensembl chrNW_004936527:9,440,036...9,484,245
JBrowse link
G Pms2 PMS1 homolog 2, mismatch repair system component involved_in ISO (PMID:10430621) CAFA PMID:10430621 NCBI chrNW_004936750:439,396...468,747 JBrowse link
G Ptprc protein tyrosine phosphatase receptor type C involved_in
acts_upstream_of_or_within
IEA
ISO
(PMID:9015183) Ensembl
MGI
PMID:9015183 GO_REF:0000107 NCBI chrNW_004936567:5,266,653...5,378,464
Ensembl chrNW_004936567:5,267,615...5,378,258
JBrowse link
G Tbx21 T-box transcription factor 21 involved_in
acts_upstream_of_or_within
IEA
ISO
(PMID:12882831) Ensembl
MGI
PMID:12882831 GO_REF:0000107 NCBI chrNW_004936490:13,546,405...13,558,635
Ensembl chrNW_004936490:13,546,292...13,558,635
JBrowse link
positive regulation of macrophage tolerance induction term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Irak3 interleukin 1 receptor associated kinase 3 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936545:4,233,353...4,284,324
Ensembl chrNW_004936545:4,233,358...4,282,806
JBrowse link
positive regulation of peripheral T cell tolerance induction term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Foxp3 forkhead box P3 involved_in
acts_upstream_of_or_within
IEA
ISO
(PMID:16532000) Ensembl
MGI
PMID:16532000 GO_REF:0000107 NCBI chrNW_004936721:1,118,376...1,125,282
Ensembl chrNW_004936721:1,118,782...1,132,308
JBrowse link
positive regulation of T cell anergy term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Cblb Cbl proto-oncogene B involved_in
acts_upstream_of_or_within
IEA
ISO
(PMID:14973438) Ensembl
MGI
PMID:14973438 GO_REF:0000107 NCBI chrNW_004936701:1,157,790...1,353,375
Ensembl chrNW_004936701:1,157,797...1,353,388
JBrowse link
G Cd3e CD3e molecule acts_upstream_of_or_within ISO (PMID:14973438) MGI PMID:14973438 NCBI chrNW_004936542:3,379,361...3,390,677 JBrowse link
G Foxp3 forkhead box P3 involved_in
acts_upstream_of_or_within
IEA
ISO
(PMID:16945588) Ensembl
MGI
PMID:16945588 GO_REF:0000107 NCBI chrNW_004936721:1,118,376...1,125,282
Ensembl chrNW_004936721:1,118,782...1,132,308
JBrowse link
G Itch itchy E3 ubiquitin protein ligase involved_in
acts_upstream_of_or_within
IEA
ISO
(PMID:14973438) Ensembl
MGI
PMID:14973438 GO_REF:0000107 NCBI chrNW_004936561:6,140,236...6,265,734
Ensembl chrNW_004936561:6,140,234...6,265,767
JBrowse link
G Nr5a2 nuclear receptor subfamily 5 group A member 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936567:4,084,161...4,194,858
Ensembl chrNW_004936567:4,084,608...4,212,854
JBrowse link
positive regulation of T cell tolerance induction term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Foxp3 forkhead box P3 involved_in
acts_upstream_of_or_within
IEA
ISO
(PMID:16945588) Ensembl
MGI
PMID:16945588 GO_REF:0000107 NCBI chrNW_004936721:1,118,376...1,125,282
Ensembl chrNW_004936721:1,118,782...1,132,308
JBrowse link
G Ido1 indoleamine 2,3-dioxygenase 1 acts_upstream_of_or_within
involved_in
ISO
IEA
(PMID:9712583) MGI
Ensembl
PMID:9712583 GO_REF:0000107 NCBI chrNW_004936843:658,058...672,662
Ensembl chrNW_004936843:657,979...672,700
JBrowse link
G Tgfbr2 transforming growth factor beta receptor 2 involved_in
acts_upstream_of_or_within
IEA
ISO
(PMID:16973387) Ensembl
MGI
PMID:16973387 GO_REF:0000107 NCBI chrNW_004936473:21,324,669...21,409,430
Ensembl chrNW_004936473:21,324,658...21,409,430
JBrowse link
positive regulation of tolerance induction to self antigen term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Tgfbr2 transforming growth factor beta receptor 2 involved_in
acts_upstream_of_or_within
IEA
ISO
(PMID:16973387) Ensembl
MGI
PMID:16973387 GO_REF:0000107 NCBI chrNW_004936473:21,324,669...21,409,430
Ensembl chrNW_004936473:21,324,658...21,409,430
JBrowse link
regulation of isotype switching term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Aplf aprataxin and PNKP like factor involved_in
acts_upstream_of_or_within
IEA
ISO
(PMID:21211721) Ensembl
MGI
PMID:21211721 GO_REF:0000107 NCBI chrNW_004936491:12,857,928...12,961,709
Ensembl chrNW_004936491:12,857,785...12,962,376
JBrowse link
G Supt6h SPT6 homolog, histone chaperone and transcription elongation factor involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936538:4,878,645...4,910,613
Ensembl chrNW_004936538:4,878,662...4,910,597
JBrowse link
regulation of isotype switching to IgG isotypes term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Foxp3 forkhead box P3 acts_upstream_of_or_within
involved_in
ISO
IEA
(PMID:16275384) MGI
Ensembl
PMID:16275384 GO_REF:0000107 NCBI chrNW_004936721:1,118,376...1,125,282
Ensembl chrNW_004936721:1,118,782...1,132,308
JBrowse link
G Il27ra interleukin 27 receptor subunit alpha acts_upstream_of_or_within
involved_in
ISO
IEA
(PMID:11057672) MGI
Ensembl
PMID:11057672 GO_REF:0000107 NCBI chrNW_004936659:2,706,037...2,720,486
Ensembl chrNW_004936659:2,705,985...2,722,748
JBrowse link
G Ndfip1 Nedd4 family interacting protein 1 acts_upstream_of_or_within ISO (PMID:17137798) MGI PMID:17137798 NCBI chrNW_004936504:12,053,470...12,103,346 JBrowse link
G Slc15a4 solute carrier family 15 member 4 involved_in ISO (PMID:25310967) UniProt PMID:25310967 NCBI chrNW_004936660:481,772...493,567 JBrowse link
regulation of T cell anergy term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Foxp3 forkhead box P3 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936721:1,118,376...1,125,282
Ensembl chrNW_004936721:1,118,782...1,132,308
JBrowse link
G Phlpp1 PH domain and leucine rich repeat protein phosphatase 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936497:2,467,776...2,683,794
Ensembl chrNW_004936497:2,467,684...2,683,799
JBrowse link
regulation of T cell tolerance induction term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Il2ra interleukin 2 receptor subunit alpha involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936484:8,514,333...8,555,392
Ensembl chrNW_004936484:8,544,062...8,555,332
JBrowse link
regulation of tolerance induction term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Hmgb1 high mobility group box 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936472:25,236,728...25,246,585
Ensembl chrNW_004936472:25,236,728...25,246,580
JBrowse link
G LOC101976825 high mobility group protein B1 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936516:6,259,790...6,261,016 JBrowse link
G Marchf7 membrane associated ring-CH-type finger 7 acts_upstream_of_or_within
involved_in
ISO
IEA
(PMID:15670816) MGI
Ensembl
PMID:15670816 GO_REF:0000107 NCBI chrNW_004936469:18,966,239...19,016,829
Ensembl chrNW_004936469:18,962,655...19,017,100
JBrowse link
regulation of tolerance induction dependent upon immune response term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Havcr2 hepatitis A virus cellular receptor 2 involved_in ISO (PMID:14556006) UniProt PMID:14556006 NCBI chrNW_004936515:6,001,324...6,015,407 JBrowse link
somatic diversification of immune receptors via somatic mutation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Adar adenosine deaminase RNA specific involved_in
acts_upstream_of_or_within
IEA
ISO
(PMID:23209284) Ensembl
MGI
PMID:23209284 GO_REF:0000107 NCBI chrNW_004936580:4,183,016...4,208,341
Ensembl chrNW_004936580:4,183,079...4,203,435
JBrowse link
somatic diversification of immunoglobulins term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Aicda activation induced cytidine deaminase involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936870:25,039...34,601
Ensembl chrNW_004936870:25,039...34,601
JBrowse link
G Ctnnbl1 catenin beta like 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936561:3,434,232...3,589,341
Ensembl chrNW_004936561:3,434,731...3,589,341
JBrowse link
G Polb DNA polymerase beta acts_upstream_of_or_within
involved_in
ISO
IEA
(PMID:24388753) MGI
Ensembl
PMID:24388753 GO_REF:0000107 NCBI chrNW_004936785:324,655...350,496
Ensembl chrNW_004936785:323,941...350,539
JBrowse link
somatic hypermutation of immunoglobulin genes term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Aicda activation induced cytidine deaminase involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936870:25,039...34,601
Ensembl chrNW_004936870:25,039...34,601
JBrowse link
G Exo1 exonuclease 1 acts_upstream_of_or_within ISO (PMID:14716311) MGI PMID:14716311 NCBI chrNW_004936526:8,570,488...8,627,004 JBrowse link
G Hmces 5-hydroxymethylcytosine binding, ES cell specific involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936798:261,566...284,480
Ensembl chrNW_004936798:261,661...273,011
JBrowse link
G Mcm3ap minichromosome maintenance complex component 3 associated protein involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936778:273,152...318,157
Ensembl chrNW_004936778:273,909...319,232
JBrowse link
G Mlh1 mutL homolog 1 involved_in
acts_upstream_of_or_within
IEA
ISO
(PMID:10092760), (PMID:10429667) Ensembl
MGI
TreeGrafter
PMID:10092760 PMID:10429667 GO_REF:0000107 GO_REF:0000118 NCBI chrNW_004936473:26,556,636...26,600,830
Ensembl chrNW_004936473:26,556,611...26,603,736
JBrowse link
G Msh2 mutS homolog 2 acts_upstream_of_or_within
NOT|acts_upstream_of_or_within
involved_in
ISO
IEA
(PMID:14568978)
(PMID:15494304)
(PMID:9607915)
(PMID:9607916)
(PMID:9697842), (PMID:9697843)
MGI
Ensembl
PMID:9607915 PMID:9607916 PMID:9697842 PMID:9697843 PMID:14568978 More... GO_REF:0000107 NCBI chrNW_004936508:4,943,987...5,013,356
Ensembl chrNW_004936508:4,944,007...5,013,356
JBrowse link
G Msh3 mutS homolog 3 NOT|acts_upstream_of_or_within ISO (PMID:10662804) MGI PMID:10662804 NCBI chrNW_004936469:82,967...275,772
Ensembl chrNW_004936469:83,285...273,561
JBrowse link
G Msh6 mutS homolog 6 acts_upstream_of_or_within
involved_in
ISO
IEA
(PMID:10662804), (PMID:15238604), (PMID:17015724)
(PMID:16618598)
MGI
Ensembl
PMID:10662804 PMID:15238604 PMID:16618598 PMID:17015724 GO_REF:0000107 NCBI chrNW_004936508:4,708,661...4,728,671
Ensembl chrNW_004936508:4,708,661...4,728,787
JBrowse link
G Nuggc nuclear GTPase, germinal center associated acts_upstream_of_or_within ISO (PMID:22833677) MGI PMID:22833677 NCBI chrNW_004936675:885,015...931,657
Ensembl chrNW_004936675:885,039...920,253
JBrowse link
G Pms2 PMS1 homolog 2, mismatch repair system component involved_in
acts_upstream_of_or_within
IEA
ISO
(PMID:10429667) TreeGrafter
MGI
PMID:10429667 GO_REF:0000118 NCBI chrNW_004936750:439,396...468,747 JBrowse link
G Polb DNA polymerase beta acts_upstream_of_or_within
involved_in
ISO
IEA
(PMID:24388753) MGI
Ensembl
PMID:24388753 GO_REF:0000107 NCBI chrNW_004936785:324,655...350,496
Ensembl chrNW_004936785:323,941...350,539
JBrowse link
G Polm DNA polymerase mu acts_upstream_of_or_within ISO (PMID:15789338) MGI PMID:15789338 NCBI chrNW_004936478:19,032,995...19,042,400
Ensembl chrNW_004936478:19,032,920...19,042,432
JBrowse link
G Polq DNA polymerase theta involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936536:7,904,166...8,004,305
Ensembl chrNW_004936536:7,904,981...8,004,199
JBrowse link
G Samhd1 SAM and HD domain containing deoxynucleoside triphosphate triphosphohydrolase 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936561:4,180,607...4,238,623
Ensembl chrNW_004936561:4,180,546...4,229,036
JBrowse link
G Ung uracil DNA glycosylase acts_upstream_of_or_within
involved_in
ISO
IEA
(PMID:17015724)
(PMID:15494304)
MGI
Ensembl
PMID:15494304 PMID:17015724 GO_REF:0000107 NCBI chrNW_004936769:911,296...922,770
Ensembl chrNW_004936769:910,838...922,726
JBrowse link
somatic recombination of immunoglobulin gene segments term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Mlh1 mutL homolog 1 acts_upstream_of_or_within
involved_in
ISO
IEA
(PMID:11828012) MGI
Ensembl
PMID:11828012 GO_REF:0000107 NCBI chrNW_004936473:26,556,636...26,600,830
Ensembl chrNW_004936473:26,556,611...26,603,736
JBrowse link
G Msh2 mutS homolog 2 acts_upstream_of_or_within
involved_in
ISO
IEA
(PMID:11828012)
(PMID:14563316), (PMID:15955838)
(PMID:15494304)
(PMID:14568978)
MGI
Ensembl
PMID:11828012 PMID:14563316 PMID:14568978 PMID:15494304 PMID:15955838 GO_REF:0000107 NCBI chrNW_004936508:4,943,987...5,013,356
Ensembl chrNW_004936508:4,944,007...5,013,356
JBrowse link
G Msh3 mutS homolog 3 involved_in
acts_upstream_of_or_within
IEA
ISO
(PMID:15238604) TreeGrafter
MGI
PMID:15238604 GO_REF:0000118 NCBI chrNW_004936469:82,967...275,772
Ensembl chrNW_004936469:83,285...273,561
JBrowse link
G Msh6 mutS homolog 6 involved_in
acts_upstream_of_or_within
IEA
ISO
(PMID:15238604) Ensembl
MGI
PMID:15238604 GO_REF:0000107 NCBI chrNW_004936508:4,708,661...4,728,671
Ensembl chrNW_004936508:4,708,661...4,728,787
JBrowse link
G Pms2 PMS1 homolog 2, mismatch repair system component acts_upstream_of_or_within ISO (PMID:11828012) MGI PMID:11828012 NCBI chrNW_004936750:439,396...468,747 JBrowse link
G Ung uracil DNA glycosylase acts_upstream_of_or_within
involved_in
ISO
IEA
(PMID:15494304) MGI
Ensembl
PMID:15494304 GO_REF:0000107 NCBI chrNW_004936769:911,296...922,770
Ensembl chrNW_004936769:910,838...922,726
JBrowse link
somatic recombination of immunoglobulin genes involved in immune response term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Mlh1 mutL homolog 1 acts_upstream_of_or_within
involved_in
ISO
IEA
(PMID:12743174) MGI
Ensembl
PMID:12743174 GO_REF:0000107 NCBI chrNW_004936473:26,556,636...26,600,830
Ensembl chrNW_004936473:26,556,611...26,603,736
JBrowse link
G Msh2 mutS homolog 2 involved_in
acts_upstream_of_or_within
IEA
ISO
(PMID:12743174) Ensembl
TreeGrafter
MGI
PMID:12743174 GO_REF:0000107 GO_REF:0000118 NCBI chrNW_004936508:4,943,987...5,013,356
Ensembl chrNW_004936508:4,944,007...5,013,356
JBrowse link
spleen development term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Abl1 ABL proto-oncogene 1, non-receptor tyrosine kinase involved_in
acts_upstream_of_or_within
IEA
ISO
(PMID:2065352) Ensembl
MGI
PMID:2065352 GO_REF:0000107 NCBI chrNW_004936487:17,690,206...17,819,619
Ensembl chrNW_004936487:17,690,968...17,819,669
JBrowse link
G Adam17 ADAM metallopeptidase domain 17 involved_in ISO (PMID:17371977) BHF-UCL PMID:17371977 NCBI chrNW_004936532:5,864,851...5,904,005
Ensembl chrNW_004936532:5,864,867...5,904,003
JBrowse link
G Ahr aryl hydrocarbon receptor involved_in ISO (PMID:7732381), (PMID:8692887) DFLAT PMID:7732381 PMID:8692887 NCBI chrNW_004936546:3,737,908...3,783,492
Ensembl chrNW_004936546:3,737,851...3,783,588
JBrowse link
G Barx1 BARX homeobox 1 involved_in
acts_upstream_of_or_within
IEA
ISO
(PMID:17855428) Ensembl
MGI
PMID:17855428 GO_REF:0000107 NCBI chrNW_004937000:88,529...96,794
Ensembl chrNW_004937000:88,529...92,147
JBrowse link
G Bcl2 BCL2 apoptosis regulator acts_upstream_of_or_within
involved_in
ISO
IEA
(PMID:15818405) MGI
Ensembl
PMID:15818405 GO_REF:0000107 NCBI chrNW_004936497:2,209,136...2,373,580
Ensembl chrNW_004936497:2,210,334...2,210,921
JBrowse link
G Bcl2l11 BCL2 like 11 involved_in
acts_upstream_of_or_within
IEA
ISO
(PMID:15818405) Ensembl
MGI
PMID:15818405 GO_REF:0000107 NCBI chrNW_004936783:15,493...50,959
Ensembl chrNW_004936783:18,194...50,983
JBrowse link
G Bcl3 BCL3 transcription coactivator involved_in
acts_upstream_of_or_within
IEA
ISO
(PMID:10586052) Ensembl
MGI
PMID:10586052 GO_REF:0000107 NCBI chrNW_004936706:1,410,848...1,427,822
Ensembl chrNW_004936706:1,416,249...1,427,407
JBrowse link
G Cacnb4 calcium voltage-gated channel auxiliary subunit beta 4 involved_in
acts_upstream_of_or_within
IEA
ISO
(PMID:5037658) Ensembl
MGI
PMID:5037658 GO_REF:0000107 NCBI chrNW_004936469:25,494,820...25,745,783
Ensembl chrNW_004936469:25,494,883...25,740,223
JBrowse link
G Cdh17 cadherin 17 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936544:7,156,213...7,208,392
Ensembl chrNW_004936544:7,156,213...7,205,127
JBrowse link
G Cdkn2b cyclin dependent kinase inhibitor 2B acts_upstream_of_or_within ISO (PMID:22560297) MGI PMID:22560297 NCBI chrNW_004936652:3,576,975...3,582,790
Ensembl chrNW_004936652:3,538,986...3,581,159
JBrowse link
G Cited2 Cbp/p300 interacting transactivator with Glu/Asp rich carboxy-terminal domain 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936560:6,353,901...6,356,749
Ensembl chrNW_004936560:6,354,338...6,356,735
JBrowse link
G Ctc1 CST telomere replication complex component 1 involved_in
acts_upstream_of_or_within
IEA
ISO
(PMID:22531781) Ensembl
MGI
PMID:22531781 GO_REF:0000107 NCBI chrNW_004936595:1,456,911...1,476,331
Ensembl chrNW_004936595:1,454,508...1,476,593
JBrowse link
G Dicer1 dicer 1, ribonuclease III acts_upstream_of_or_within ISO (PMID:21307095) MGI PMID:21307095 NCBI chrNW_004936846:528,768...584,599
Ensembl chrNW_004936846:532,972...575,689
JBrowse link
G Epb42 erythrocyte membrane protein band 4.2 involved_in
acts_upstream_of_or_within
IEA
ISO
(PMID:10359562) Ensembl
MGI
PMID:10359562 GO_REF:0000107 NCBI chrNW_004936471:6,377,232...6,393,588
Ensembl chrNW_004936471:6,377,775...6,395,753
JBrowse link
G Fadd Fas associated via death domain involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936599:633,501...639,412
Ensembl chrNW_004936599:633,330...639,456
JBrowse link
G Fam210b family with sequence similarity 210 member B acts_upstream_of_or_within
involved_in
ISO
IEA
(PMID:39000360) MGI
Ensembl
PMID:39000360 GO_REF:0000107 NCBI chrNW_004936875:284,612...291,649
Ensembl chrNW_004936875:284,664...291,649
JBrowse link
G Fas Fas cell surface death receptor acts_upstream_of_or_within ISO (PMID:18199416) MGI PMID:18199416 NCBI chrNW_004936735:209,369...234,582 JBrowse link
G Fgf10 fibroblast growth factor 10 involved_in
acts_upstream_of_or_within
IEA
ISO
(PMID:15329346) Ensembl
MGI
PMID:15329346 GO_REF:0000107 NCBI chrNW_004936480:18,114,231...18,195,884
Ensembl chrNW_004936480:18,114,204...18,195,898
JBrowse link
G Flt3 fms related receptor tyrosine kinase 3 acts_upstream_of_or_within ISO (PMID:22674806) MGI PMID:22674806 NCBI chrNW_004936472:23,169,967...23,239,178
Ensembl chrNW_004936472:23,170,470...23,256,904
JBrowse link
G Flvcr1 FLVCR choline and heme transporter 1 involved_in
acts_upstream_of_or_within
IEA
ISO
(PMID:18258918) Ensembl
MGI
PMID:18258918 GO_REF:0000107 NCBI chrNW_004936557:693,445...727,166
Ensembl chrNW_004936557:692,489...726,965
JBrowse link
G Hoxb4 homeobox B4 acts_upstream_of_or_within
involved_in
ISO
IEA
(PMID:14962901) MGI
Ensembl
PMID:14962901 GO_REF:0000107 NCBI chrNW_004936490:12,808,679...12,811,688
Ensembl chrNW_004936490:12,808,679...12,811,688
JBrowse link
G Jarid2 jumonji and AT-rich interaction domain containing 2 involved_in
acts_upstream_of_or_within
IEA
ISO
(PMID:9376320) Ensembl
MGI
PMID:9376320 GO_REF:0000107 NCBI chrNW_004936552:1,566,382...1,786,837
Ensembl chrNW_004936552:1,566,788...1,785,490
JBrowse link
G Kmt2a lysine methyltransferase 2A involved_in
acts_upstream_of_or_within
IEA
ISO
(PMID:22674806) Ensembl
MGI
PMID:22674806 GO_REF:0000107 NCBI chrNW_004936542:3,480,071...3,566,823
Ensembl chrNW_004936542:3,391,774...3,562,147
JBrowse link
G LOC101960702 lysosomal acid lipase/cholesteryl ester hydrolase involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936601:4,975,296...5,008,938
Ensembl chrNW_004936601:4,975,211...5,008,962
JBrowse link
G LOC101960907 uncharacterized LOC101960907 acts_upstream_of_or_within ISO (PMID:12874218) MGI PMID:12874218 NCBI chrNW_004936471:14,532,888...14,581,258
Ensembl chrNW_004936471:14,532,892...14,566,904
JBrowse link
G LOC101967819 cytochrome c oxidase assembly factor 5 acts_upstream_of_or_within
involved_in
ISO
IEA
(PMID:36301669) MGI
Ensembl
PMID:36301669 GO_REF:0000107 NCBI chrNW_004936744:1,695,656...1,701,897
Ensembl chrNW_004936744:1,695,865...1,701,872
JBrowse link
G LOC101974307 protein SCO1 homolog, mitochondrial acts_upstream_of_or_within ISO (PMID:36301669) MGI PMID:36301669 NCBI chrNW_004936595:3,523,789...3,537,933
Ensembl chrNW_004936595:3,523,779...3,538,150
JBrowse link
G LOC101977127 cyclin-dependent kinase inhibitor 2A involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936652:3,539,004...3,545,321 JBrowse link
G Myb MYB proto-oncogene, transcription factor acts_upstream_of_or_within ISO (PMID:19360001) MGI PMID:19360001 NCBI chrNW_004936560:2,797,943...2,828,813
Ensembl chrNW_004936560:2,796,697...2,829,650
JBrowse link
G Nfkb2 nuclear factor kappa B subunit 2 involved_in
acts_upstream_of_or_within
IEA
ISO
(PMID:10586052) Ensembl
MGI
PMID:10586052 GO_REF:0000107 NCBI chrNW_004936600:3,465,016...3,471,258
Ensembl chrNW_004936600:3,465,162...3,471,205
JBrowse link
G Nfkbiz NFKB inhibitor zeta involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936630:1,601,006...1,633,844
Ensembl chrNW_004936630:1,601,010...1,632,745
JBrowse link
G Nkx2-3 NK2 homeobox 3 acts_upstream_of_or_within
involved_in
ISO
IEA
(PMID:10926756)
(PMID:10207146), (PMID:10790368)
MGI
Ensembl
PMID:10207146 PMID:10790368 PMID:10926756 GO_REF:0000107 NCBI chrNW_004936636:529,669...532,237
Ensembl chrNW_004936636:529,669...532,237
JBrowse link
G Nkx2-5 NK2 homeobox 5 involved_in
acts_upstream_of_or_within
IEA
ISO
(PMID:22560297) Ensembl
MGI
PMID:22560297 GO_REF:0000107 NCBI chrNW_004936609:2,406,004...2,408,980
Ensembl chrNW_004936609:2,406,004...2,409,046
JBrowse link
G Nkx3-2 NK3 homeobox 2 acts_upstream_of_or_within
involved_in
ISO
IEA
(PMID:19208343)
(PMID:10449756), (PMID:15329346)
(PMID:10572046)
MGI
Ensembl
PMID:10449756 PMID:10572046 PMID:15329346 PMID:19208343 GO_REF:0000107 NCBI chrNW_004936477:13,999,045...14,001,659
Ensembl chrNW_004936477:13,999,045...14,001,659
JBrowse link
G Nr1h3 nuclear receptor subfamily 1 group H member 3 ISO RGD PMID:17341476 RGD:401827282 NCBI chrNW_004936562:1,937,665...1,946,680
Ensembl chrNW_004936562:1,937,667...1,946,669
JBrowse link
G Onecut1 one cut homeobox 1 involved_in IEA Ensembl GO_REF:0000107
G Pbx1 PBX homeobox 1 involved_in
acts_upstream_of_or_within
IEA
ISO
(PMID:15944191)
(PMID:22560297)
Ensembl
MGI
PMID:15944191 PMID:22560297 GO_REF:0000107 NCBI chrNW_004936481:20,200,236...20,440,623
Ensembl chrNW_004936481:20,203,405...20,440,629
JBrowse link
G Pcid2 PCI domain containing 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936472:440,440...464,116
Ensembl chrNW_004936472:446,712...465,039
JBrowse link
G Pitx2 paired like homeodomain 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936563:1,713,294...1,732,431 JBrowse link
G Pkn1 protein kinase N1 involved_in
acts_upstream_of_or_within
IEA
ISO
(PMID:23223530) Ensembl
MGI
PMID:23223530 GO_REF:0000107 NCBI chrNW_004936659:2,990,905...3,014,553
Ensembl chrNW_004936659:2,990,937...3,014,485
JBrowse link
G Polb DNA polymerase beta involved_in
acts_upstream_of_or_within
IEA
ISO
(PMID:24388753) Ensembl
MGI
PMID:24388753 GO_REF:0000107 NCBI chrNW_004936785:324,655...350,496
Ensembl chrNW_004936785:323,941...350,539
JBrowse link
G Ppp2r3c protein phosphatase 2 regulatory subunit B''gamma involved_in
acts_upstream_of_or_within
IEA
ISO
(PMID:16129705) Ensembl
MGI
PMID:16129705 GO_REF:0000107 NCBI chrNW_004936494:9,247,600...9,283,019
Ensembl chrNW_004936494:9,244,588...9,283,019
JBrowse link
G Prkdc protein kinase, DNA-activated, catalytic subunit ISO RGD PMID:22981234 RGD:8696027 NCBI chrNW_004936590:4,722,914...4,887,615
Ensembl chrNW_004936590:4,722,873...4,890,156
JBrowse link
G Psmb9 proteasome 20S subunit beta 9 ISO RGD PMID:24707720 RGD:9854625 NCBI chrNW_004936476:25,894,313...25,899,132
Ensembl chrNW_004936476:25,894,027...25,899,319
JBrowse link
G Rbm15 RNA binding motif protein 15 involved_in
acts_upstream_of_or_within
IEA
ISO
(PMID:18981216) Ensembl
MGI
PMID:18981216 GO_REF:0000107 NCBI chrNW_004936704:1,779,981...1,787,339
Ensembl chrNW_004936704:1,779,482...1,788,710
JBrowse link
G Rc3h1 ring finger and CCCH-type domains 1 acts_upstream_of_or_within
involved_in
ISO
IEA
(PMID:23583643) MGI
Ensembl
PMID:23583643 GO_REF:0000107 NCBI chrNW_004936481:13,919,006...13,973,868
Ensembl chrNW_004936481:13,919,257...13,966,677
JBrowse link
G Rc3h2 ring finger and CCCH-type domains 2 involved_in
acts_upstream_of_or_within
IEA
ISO
(PMID:23583643) Ensembl
MGI
PMID:23583643 GO_REF:0000107 NCBI chrNW_004936487:11,341,663...11,393,275
Ensembl chrNW_004936487:11,341,700...11,389,859
JBrowse link
G Rcbtb2 RCC1 and BTB domain containing protein 2 acts_upstream_of_or_within
involved_in
ISO
IEA
(PMID:26291700) MGI
Ensembl
PMID:26291700 GO_REF:0000107 NCBI chrNW_004936565:1,750,565...1,789,779
Ensembl chrNW_004936565:1,750,105...1,789,737
JBrowse link
G Ripk3 receptor interacting serine/threonine kinase 3 involved_in ISS
IEA
UniProt
Ensembl
GO_REF:0000024 GO_REF:0000107 NCBI chrNW_004936722:209,019...212,817
Ensembl chrNW_004936722:209,013...212,839
JBrowse link
G Samd9l sterile alpha motif domain containing 9 like acts_upstream_of_or_within ISO (PMID:24029230) MGI PMID:24029230 NCBI chrNW_004936803:731,878...754,540
Ensembl chrNW_004936803:749,740...754,473
JBrowse link
G Slc40a1 solute carrier family 40 member 1 acts_upstream_of_or_within
involved_in
ISO
IEA
(PMID:15342464) MGI
Ensembl
PMID:15342464 GO_REF:0000107 NCBI chrNW_004936506:8,396,593...8,415,069
Ensembl chrNW_004936506:8,396,912...8,416,374
JBrowse link
G Tcf21 transcription factor 21 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936560:1,733,903...1,736,895
Ensembl chrNW_004936560:1,733,903...1,736,890
JBrowse link
G Tet2 tet methylcytosine dioxygenase 2 acts_upstream_of_or_within ISO (PMID:21803851) MGI PMID:21803851 NCBI chrNW_004936752:440,137...577,339
Ensembl chrNW_004936752:440,136...577,615
JBrowse link
G Tlx1 T cell leukemia homeobox 1 acts_upstream_of_or_within ISO (PMID:11356032)
(PMID:15944191)
MGI PMID:11356032 PMID:15944191 NCBI chrNW_004936600:4,564,246...4,569,774 JBrowse link
G Traf3ip2 TRAF3 interacting protein 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936679:308,508...348,561
Ensembl chrNW_004936679:316,277...336,557
JBrowse link
spleen trabecula formation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Slc40a1 solute carrier family 40 member 1 acts_upstream_of_or_within
involved_in
ISO
IEA
(PMID:15342464) MGI
Ensembl
PMID:15342464 GO_REF:0000107 NCBI chrNW_004936506:8,396,593...8,415,069
Ensembl chrNW_004936506:8,396,912...8,416,374
JBrowse link
T cell anergy term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Cblb Cbl proto-oncogene B involved_in
acts_upstream_of
IEA
ISO
(PMID:14973438) Ensembl
MGI
PMID:14973438 GO_REF:0000107 NCBI chrNW_004936701:1,157,790...1,353,375
Ensembl chrNW_004936701:1,157,797...1,353,388
JBrowse link
G Cd3e CD3e molecule acts_upstream_of ISO (PMID:14973438) MGI PMID:14973438 NCBI chrNW_004936542:3,379,361...3,390,677 JBrowse link
G Foxp3 forkhead box P3 involved_in
acts_upstream_of
IEA
ISO
(PMID:16945588) Ensembl
MGI
PMID:16945588 GO_REF:0000107 NCBI chrNW_004936721:1,118,376...1,125,282
Ensembl chrNW_004936721:1,118,782...1,132,308
JBrowse link
G Itch itchy E3 ubiquitin protein ligase involved_in
acts_upstream_of
IEA
ISO
(PMID:14973438) Ensembl
MGI
PMID:14973438 GO_REF:0000107 NCBI chrNW_004936561:6,140,236...6,265,734
Ensembl chrNW_004936561:6,140,234...6,265,767
JBrowse link
T cell receptor V(D)J recombination term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Bcl11b BCL11 transcription factor B acts_upstream_of_or_within
involved_in
ISO
IEA
(PMID:12717433) MGI
Ensembl
PMID:12717433 GO_REF:0000107 NCBI chrNW_004936604:3,023,781...3,110,104
Ensembl chrNW_004936604:3,023,844...3,110,083
JBrowse link
G Lef1 lymphoid enhancer binding factor 1 involved_in
acts_upstream_of_or_within
IEA
ISO
(PMID:9462507) Ensembl
MGI
PMID:9462507 GO_REF:0000107 NCBI chrNW_004936818:453,635...569,194
Ensembl chrNW_004936818:453,635...567,469
JBrowse link
G Lig4 DNA ligase 4 involved_in
acts_upstream_of_or_within
IEA
ISO
(PMID:10911993) Ensembl
MGI
PMID:10911993 GO_REF:0000107 NCBI chrNW_004936472:3,861,833...3,867,943
Ensembl chrNW_004936472:3,861,866...3,867,933
JBrowse link
G Prkdc protein kinase, DNA-activated, catalytic subunit involved_in
acts_upstream_of_or_within
IEA
ISO
(PMID:9768755) Ensembl
MGI
PMID:9768755 GO_REF:0000107 NCBI chrNW_004936590:4,722,914...4,887,615
Ensembl chrNW_004936590:4,722,873...4,890,156
JBrowse link
G Tcf7 transcription factor 7 acts_upstream_of_or_within ISO (PMID:9462507) MGI PMID:9462507 NCBI chrNW_004936647:1,096,726...1,125,753
Ensembl chrNW_004936647:1,097,019...1,125,729
JBrowse link
T cell tolerance induction term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Foxp3 forkhead box P3 involved_in
acts_upstream_of
IEA
ISO
(PMID:16945588) Ensembl
MGI
PMID:16945588 GO_REF:0000107 NCBI chrNW_004936721:1,118,376...1,125,282
Ensembl chrNW_004936721:1,118,782...1,132,308
JBrowse link
G Icos inducible T cell costimulator involved_in ISO
IEA
RGD
TreeGrafter
PMID:16220623 GO_REF:0000118 RGD:1624271 NCBI chrNW_004936631:562,650...572,263
Ensembl chrNW_004936631:551,394...570,804
JBrowse link
thymus development term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Abl1 ABL proto-oncogene 1, non-receptor tyrosine kinase acts_upstream_of_or_within
involved_in
ISO
IEA
(PMID:2065352) MGI
Ensembl
PMID:2065352 GO_REF:0000107 NCBI chrNW_004936487:17,690,206...17,819,619
Ensembl chrNW_004936487:17,690,968...17,819,669
JBrowse link
G Adrm1 ADRM1 26S proteasome ubiquitin receptor involved_in ISO (PMID:21048919) BHF-UCL PMID:21048919 NCBI chrNW_004936514:9,923,956...9,928,168
Ensembl chrNW_004936514:9,923,896...9,928,170
JBrowse link
G Apc APC regulator of WNT signaling pathway acts_upstream_of_or_within ISO (PMID:17002498)
(PMID:16025118)
MGI PMID:16025118 PMID:17002498 NCBI chrNW_004936531:6,899,580...7,019,016
Ensembl chrNW_004936531:6,899,788...7,019,453
JBrowse link
G Asxl1 ASXL transcriptional regulator 1 involved_in
acts_upstream_of_or_within
IEA
ISO
(PMID:19861679) Ensembl
MGI
PMID:19861679 GO_REF:0000107 NCBI chrNW_004936485:19,218,494...19,297,188
Ensembl chrNW_004936485:19,227,400...19,298,912
JBrowse link
G Atm ATM serine/threonine kinase involved_in
acts_upstream_of_or_within
IEA
ISO
(PMID:8843194) Ensembl
MGI
PMID:8843194 GO_REF:0000107 NCBI chrNW_004936551:359,134...534,672
Ensembl chrNW_004936551:359,362...532,211
JBrowse link
G Bcl11b BCL11 transcription factor B involved_in
acts_upstream_of_or_within
IEA
ISO
(PMID:12717433) Ensembl
MGI
PMID:12717433 GO_REF:0000107 NCBI chrNW_004936604:3,023,781...3,110,104
Ensembl chrNW_004936604:3,023,844...3,110,083
JBrowse link
G Bcl2 BCL2 apoptosis regulator involved_in
acts_upstream_of_or_within
IEA
ISO
(PMID:15818405)
(PMID:9241272)
Ensembl
MGI
PMID:9241272 PMID:15818405 GO_REF:0000107 NCBI chrNW_004936497:2,209,136...2,373,580
Ensembl chrNW_004936497:2,210,334...2,210,921
JBrowse link
G Bcl2l11 BCL2 like 11 involved_in
acts_upstream_of_or_within
IEA
ISO
(PMID:15818405) Ensembl
MGI
PMID:15818405 GO_REF:0000107 NCBI chrNW_004936783:15,493...50,959
Ensembl chrNW_004936783:18,194...50,983
JBrowse link
G Braf B-Raf proto-oncogene, serine/threonine kinase involved_in
acts_upstream_of_or_within
IEA
ISO
(PMID:18952847) Ensembl
MGI
PMID:18952847 GO_REF:0000107 NCBI chrNW_004936592:4,728,371...4,833,830
Ensembl chrNW_004936592:4,737,011...4,834,664
JBrowse link
G Cacnb4 calcium voltage-gated channel auxiliary subunit beta 4 involved_in
acts_upstream_of_or_within
IEA
ISO
(PMID:5037658) Ensembl
MGI
PMID:5037658 GO_REF:0000107 NCBI chrNW_004936469:25,494,820...25,745,783
Ensembl chrNW_004936469:25,494,883...25,740,223
JBrowse link
G Carmil2 capping protein regulator and myosin 1 linker 2 acts_upstream_of_or_within ISO (PMID:23793062) MGI PMID:23793062 NCBI chrNW_004936475:18,036,233...18,049,144
Ensembl chrNW_004936475:18,035,994...18,049,129
JBrowse link
G Ccnb2 cyclin B2 acts_upstream_of_or_within ISO (PMID:9539739) MGI PMID:9539739 NCBI chrNW_004936471:20,216,435...20,238,543 JBrowse link
G Cited2 Cbp/p300 interacting transactivator with Glu/Asp rich carboxy-terminal domain 2 involved_in
acts_upstream_of_or_within
IEA
ISO
(PMID:20549734) Ensembl
MGI
PMID:20549734 GO_REF:0000107 NCBI chrNW_004936560:6,353,901...6,356,749
Ensembl chrNW_004936560:6,354,338...6,356,735
JBrowse link
G Crkl CRK like proto-oncogene, adaptor protein acts_upstream_of_or_within
involved_in
ISO
IEA
(PMID:16399080) MGI
Ensembl
PMID:16399080 GO_REF:0000107 NCBI chrNW_004936619:2,447,686...2,479,589
Ensembl chrNW_004936619:2,447,614...2,479,805
JBrowse link
G Ctc1 CST telomere replication complex component 1 acts_upstream_of_or_within
involved_in
ISO
IEA
(PMID:22531781) MGI
Ensembl
PMID:22531781 GO_REF:0000107 NCBI chrNW_004936595:1,456,911...1,476,331
Ensembl chrNW_004936595:1,454,508...1,476,593
JBrowse link
G Ctnnb1 catenin beta 1 involved_in
acts_upstream_of_or_within
IEA
ISO
(PMID:16025118) Ensembl
MGI
PMID:16025118 GO_REF:0000107 NCBI chrNW_004936473:29,999,542...30,034,610
Ensembl chrNW_004936473:29,999,562...30,038,293
JBrowse link
G Ephb3 EPH receptor B3 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936578:5,286,580...5,297,369
Ensembl chrNW_004936578:5,287,340...5,298,142
JBrowse link
G Fadd Fas associated via death domain involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936599:633,501...639,412
Ensembl chrNW_004936599:633,330...639,456
JBrowse link
G Fgf10 fibroblast growth factor 10 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936480:18,114,231...18,195,884
Ensembl chrNW_004936480:18,114,204...18,195,898
JBrowse link
G Fgf3 fibroblast growth factor 3 acts_upstream_of_or_within ISO (PMID:17000704) MGI PMID:17000704 NCBI chrNW_004936599:868,634...875,464
Ensembl chrNW_004936599:868,634...875,464
JBrowse link
G Foxe1 forkhead box E1 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936524:6,619,128...6,620,278
Ensembl chrNW_004936524:6,619,128...6,620,278
JBrowse link
G Foxi3 forkhead box I3 involved_in ISO (PMID:31412026) UniProt PMID:31412026 NCBI chrNW_004936712:517,566...522,709
Ensembl chrNW_004936712:517,562...522,925
JBrowse link
G Foxn1 forkhead box N1 acts_upstream_of_or_within
involved_in
ISO
IEA
(PMID:22072979) RGD
MGI
Ensembl
PMID:8790387 PMID:22072979 GO_REF:0000107 RGD:1300512 NCBI chrNW_004936538:4,717,509...4,745,504
Ensembl chrNW_004936538:4,731,958...4,744,796
JBrowse link
G Gata3 GATA binding protein 3 involved_in
acts_upstream_of_or_within
IEA
ISO
(PMID:17082577) Ensembl
MGI
PMID:17082577 GO_REF:0000107 NCBI chrNW_004936484:6,780,692...6,800,883
Ensembl chrNW_004936484:6,780,692...6,800,966
JBrowse link
G Hand2 heart and neural crest derivatives expressed 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936516:4,692,926...4,695,625
Ensembl chrNW_004936516:4,692,926...4,695,632
JBrowse link
G Hes1 hes family bHLH transcription factor 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936711:640,002...642,580
Ensembl chrNW_004936711:639,905...642,622
JBrowse link
G Hnrnpk heterogeneous nuclear ribonucleoprotein K ISO RGD PMID:16488668 RGD:10002779 NCBI chrNW_004936828:827,660...839,088
Ensembl chrNW_004936828:828,837...838,720
JBrowse link
G Hoxa3 homeobox A3 involved_in
acts_upstream_of_or_within
IEA
ISO
(PMID:9520319)
(PMID:7635047)
(PMID:11476574)
Ensembl
MGI
PMID:7635047 PMID:9520319 PMID:11476574 GO_REF:0000107 NCBI chrNW_004936478:3,735,509...3,767,899
Ensembl chrNW_004936478:3,735,505...3,767,899
JBrowse link
G Ikzf1 IKAROS family zinc finger 1 acts_upstream_of_or_within ISO (PMID:7923373) MGI PMID:7923373 NCBI chrNW_004936686:1,459,582...1,556,478
Ensembl chrNW_004936686:1,462,145...1,556,451
JBrowse link
G Jarid2 jumonji and AT-rich interaction domain containing 2 involved_in
acts_upstream_of_or_within
IEA
ISO
(PMID:9376320) Ensembl
MGI
PMID:9376320 GO_REF:0000107 NCBI chrNW_004936552:1,566,382...1,786,837
Ensembl chrNW_004936552:1,566,788...1,785,490
JBrowse link
G Lmo4 LIM domain only 4 involved_in
acts_upstream_of_or_within
IEA
ISO
(PMID:20549734) Ensembl
MGI
PMID:20549734 GO_REF:0000107 NCBI chrNW_004936732:1,541,511...1,557,845
Ensembl chrNW_004936732:1,541,515...1,555,735
JBrowse link
G LOC101967819 cytochrome c oxidase assembly factor 5 acts_upstream_of_or_within
involved_in
ISO
IEA
(PMID:36301669) MGI
Ensembl
PMID:36301669 GO_REF:0000107 NCBI chrNW_004936744:1,695,656...1,701,897
Ensembl chrNW_004936744:1,695,865...1,701,872
JBrowse link
G LOC101974307 protein SCO1 homolog, mitochondrial acts_upstream_of_or_within ISO (PMID:36301669) MGI PMID:36301669 NCBI chrNW_004936595:3,523,789...3,537,933
Ensembl chrNW_004936595:3,523,779...3,538,150
JBrowse link
G Mad1l1 mitotic arrest deficient 1 like 1 acts_upstream_of_or_within ISO (PMID:11313860) MGI PMID:11313860 NCBI chrNW_004936754:1,842,588...1,957,116 JBrowse link
G Mafb MAF bZIP transcription factor B acts_upstream_of_or_within
involved_in
ISO
IEA
(PMID:19164599) MGI
Ensembl
PMID:19164599 GO_REF:0000107 NCBI chrNW_004936561:1,007,273...1,010,548
Ensembl chrNW_004936561:1,007,647...1,008,618
JBrowse link
G Map2k1 mitogen-activated protein kinase kinase 1 involved_in
acts_upstream_of_or_within
IEA
ISO
(PMID:18952847) Ensembl
MGI
PMID:18952847 GO_REF:0000107 NCBI chrNW_004936471:26,589,251...26,628,302
Ensembl chrNW_004936471:26,589,161...26,628,302
JBrowse link
G Map2k2 mitogen-activated protein kinase kinase 2 acts_upstream_of_or_within
involved_in
ISO
IEA
(PMID:18952847) MGI
Ensembl
PMID:18952847 GO_REF:0000107 NCBI chrNW_004936588:2,338,127...2,377,090
Ensembl chrNW_004936588:2,336,858...2,377,090
JBrowse link
G Mapk1 mitogen-activated protein kinase 1 involved_in
acts_upstream_of_or_within
IEA
ISO
(PMID:18952847) Ensembl
MGI
PMID:18952847 GO_REF:0000107 NCBI chrNW_004936619:1,889,841...1,932,646
Ensembl chrNW_004936619:1,889,708...1,932,646
JBrowse link
G Mapk3 mitogen-activated protein kinase 3 involved_in
acts_upstream_of_or_within
IEA
ISO
(PMID:18952847) Ensembl
MGI
PMID:18952847 GO_REF:0000107 NCBI chrNW_004936501:12,342,670...12,390,650
Ensembl chrNW_004936501:12,384,804...12,392,180
JBrowse link
G Myb MYB proto-oncogene, transcription factor acts_upstream_of_or_within ISO (PMID:17927961) MGI PMID:17927961 NCBI chrNW_004936560:2,797,943...2,828,813
Ensembl chrNW_004936560:2,796,697...2,829,650
JBrowse link
G Nfatc3 nuclear factor of activated T cells 3 acts_upstream_of_or_within ISO (PMID:9768749) MGI PMID:9768749 NCBI chrNW_004936475:18,462,424...18,557,832
Ensembl chrNW_004936475:18,462,298...18,555,220
JBrowse link
G Nr1h3 nuclear receptor subfamily 1 group H member 3 ISO RGD PMID:17341476 RGD:401827282 NCBI chrNW_004936562:1,937,665...1,946,680
Ensembl chrNW_004936562:1,937,667...1,946,669
JBrowse link
G Pax1 paired box 1 involved_in
acts_upstream_of_or_within
IEA
ISO
(PMID:11476574) Ensembl
MGI
PMID:11476574 GO_REF:0000107 NCBI chrNW_004936620:3,765,481...3,773,779
Ensembl chrNW_004936620:3,765,444...3,776,467
JBrowse link
G Pbx1 PBX homeobox 1 involved_in
acts_upstream_of_or_within
IEA
ISO
(PMID:15581866) Ensembl
MGI
PMID:15581866 GO_REF:0000107 NCBI chrNW_004936481:20,200,236...20,440,623
Ensembl chrNW_004936481:20,203,405...20,440,629
JBrowse link
G Prdx2 peroxiredoxin 2 acts_upstream_of_or_within ISO (PMID:15259009) MGI PMID:15259009 NCBI chrNW_004936659:1,894,423...1,897,690 JBrowse link
G Prkdc protein kinase, DNA-activated, catalytic subunit ISO RGD PMID:22981234 RGD:8696027 NCBI chrNW_004936590:4,722,914...4,887,615
Ensembl chrNW_004936590:4,722,873...4,890,156
JBrowse link
G Psen1 presenilin 1 acts_upstream_of_or_within
involved_in
ISO
IEA
(PMID:17698590) MGI
Ensembl
PMID:17698590 GO_REF:0000107 NCBI chrNW_004936488:2,464,623...2,528,807
Ensembl chrNW_004936488:2,464,527...2,530,065
JBrowse link
G Psen2 presenilin 2 acts_upstream_of_or_within ISO (PMID:17698590) MGI PMID:17698590 NCBI chrNW_004936526:3,584,194...3,611,719
Ensembl chrNW_004936526:3,584,188...3,614,074
JBrowse link
G Psmb9 proteasome 20S subunit beta 9 ISO RGD PMID:18457575 RGD:9850287 NCBI chrNW_004936476:25,894,313...25,899,132
Ensembl chrNW_004936476:25,894,027...25,899,319
JBrowse link
G Raf1 Raf-1 proto-oncogene, serine/threonine kinase involved_in
acts_upstream_of_or_within
IEA
ISO
(PMID:18952847) Ensembl
MGI
PMID:18952847 GO_REF:0000107 NCBI chrNW_004936602:1,089,979...1,114,376
Ensembl chrNW_004936602:1,051,205...1,117,096
JBrowse link
G Rag1 recombination activating 1 acts_upstream_of_or_within
involved_in
ISO
IEA
(PMID:18684012) MGI
Ensembl
PMID:18684012 GO_REF:0000107 NCBI chrNW_004936533:1,817,135...1,827,393
Ensembl chrNW_004936533:1,817,135...1,827,393
JBrowse link
G Ripk3 receptor interacting serine/threonine kinase 3 involved_in IEA
ISS
Ensembl
UniProt
GO_REF:0000024 GO_REF:0000107 NCBI chrNW_004936722:209,019...212,817
Ensembl chrNW_004936722:209,013...212,839
JBrowse link
G Shh sonic hedgehog signaling molecule involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936527:10,033,095...10,042,713
Ensembl chrNW_004936527:10,033,299...10,042,599
JBrowse link
G Six1 SIX homeobox 1 involved_in
acts_upstream_of_or_within
IEA
ISO
(PMID:16530750) Ensembl
MGI
PMID:16530750 GO_REF:0000107 NCBI chrNW_004936495:4,839,496...4,842,906
Ensembl chrNW_004936495:4,838,051...4,842,994
JBrowse link
G Six4 SIX homeobox 4 acts_upstream_of_or_within
involved_in
ISO
IEA
(PMID:16530750) MGI
Ensembl
PMID:16530750 GO_REF:0000107 NCBI chrNW_004936495:4,887,718...4,900,198
Ensembl chrNW_004936495:4,887,718...4,900,198
JBrowse link
G Slc46a2 solute carrier family 46 member 2 involved_in
acts_upstream_of_or_within
IEA
ISO
(PMID:18684012) Ensembl
MGI
PMID:18684012 GO_REF:0000107 NCBI chrNW_004936559:670,239...674,061
Ensembl chrNW_004936559:670,231...679,766
JBrowse link
G Srf serum response factor acts_upstream_of_or_within
involved_in
ISO
IEA
(PMID:18952847) MGI
Ensembl
PMID:18952847 GO_REF:0000107 NCBI chrNW_004936476:16,779,941...16,789,499
Ensembl chrNW_004936476:16,782,233...16,789,130
JBrowse link
G Tbx1 T-box transcription factor 1 involved_in
acts_upstream_of_or_within
ISO (PMID:31412026)
(PMID:17916582)
(PMID:14585638)
UniProt
MGI
PMID:14585638 PMID:17916582 PMID:31412026 NCBI chrNW_004936619:3,662,567...3,670,470
Ensembl chrNW_004936619:3,664,468...3,670,525
JBrowse link
G Tgfbr1 transforming growth factor beta receptor 1 involved_in
acts_upstream_of_or_within
IEA
ISO
(PMID:17078885) Ensembl
MGI
PMID:17078885 GO_REF:0000107 NCBI chrNW_004936524:7,656,523...7,680,043
Ensembl chrNW_004936524:7,655,847...7,681,097
JBrowse link
G Tyr tyrosinase acts_upstream_of_or_within
involved_in
ISO
IEA
(PMID:10890980) MGI
Ensembl
PMID:10890980 GO_REF:0000107 NCBI chrNW_004936736:421,623...519,085
Ensembl chrNW_004936736:421,598...519,253
JBrowse link
G Zbtb1 zinc finger and BTB domain containing 1 involved_in ISO (PMID:22201126) UniProt PMID:22201126 NCBI chrNW_004936495:8,212,136...8,238,876 JBrowse link
G Zmpste24 zinc metallopeptidase STE24 involved_in
acts_upstream_of_or_within
IEA
ISO
(PMID:11923874) Ensembl
MGI
PMID:11923874 GO_REF:0000107 NCBI chrNW_004936474:22,035,059...22,077,846
Ensembl chrNW_004936474:22,034,801...22,077,986
JBrowse link
thymus epithelium morphogenesis term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Aire autoimmune regulator involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936500:125,589...137,071
Ensembl chrNW_004936500:125,795...137,056
JBrowse link
G Foxn1 forkhead box N1 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936538:4,717,509...4,745,504
Ensembl chrNW_004936538:4,731,958...4,744,796
JBrowse link
tolerance induction term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G C3 complement C3 ISO RGD PMID:16555329 RGD:5129541 NCBI chrNW_004936588:3,985,732...4,023,221 JBrowse link
G Ccr4 C-C motif chemokine receptor 4 acts_upstream_of_or_within ISO (PMID:15809349) MGI PMID:15809349 NCBI chrNW_004936473:23,321,167...23,323,075 JBrowse link
G Foxp3 forkhead box P3 involved_in
acts_upstream_of_or_within
IEA
ISO
(PMID:15809349) Ensembl
MGI
PMID:15809349 GO_REF:0000107 NCBI chrNW_004936721:1,118,376...1,125,282
Ensembl chrNW_004936721:1,118,782...1,132,308
JBrowse link
tolerance induction to lipopolysaccharide term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Acod1 aconitate decarboxylase 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936511:4,322,198...4,326,562
Ensembl chrNW_004936511:4,322,198...4,329,686
JBrowse link
G Tnfaip3 TNF alpha induced protein 3 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936560:5,124,955...5,138,988
Ensembl chrNW_004936560:5,128,843...5,138,345
JBrowse link
tolerance induction to nonself antigen term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G C3ar1 complement C3a receptor 1 ISO RGD PMID:12514742 RGD:5129547 NCBI chrNW_004936892:347,547...355,143
Ensembl chrNW_004936892:347,842...349,296
JBrowse link
tolerance induction to self antigen term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Foxp3 forkhead box P3 involved_in
acts_upstream_of_or_within
IEA
ISO
(PMID:15780990) Ensembl
MGI
PMID:15780990 GO_REF:0000107 NCBI chrNW_004936721:1,118,376...1,125,282
Ensembl chrNW_004936721:1,118,782...1,132,308
JBrowse link
G Lyn LYN proto-oncogene, Src family tyrosine kinase involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936496:2,578,598...2,698,165
Ensembl chrNW_004936496:2,637,958...2,700,055
JBrowse link
G Tgfb1 transforming growth factor beta 1 involved_in
acts_upstream_of_or_within
IEA
ISO
(PMID:17481928) Ensembl
MGI
PMID:17481928 GO_REF:0000107 NCBI chrNW_004936661:3,742,080...3,758,266
Ensembl chrNW_004936661:3,742,066...3,758,272
JBrowse link
G Xkr8 XK related 8 acts_upstream_of_or_within
involved_in
ISO
IEA
(PMID:29440417) MGI
Ensembl
PMID:29440417 GO_REF:0000107 NCBI chrNW_004936474:12,180,741...12,187,904
Ensembl chrNW_004936474:12,180,424...12,187,876
JBrowse link
V(D)J recombination term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Atm ATM serine/threonine kinase acts_upstream_of_or_within
involved_in
ISO
IEA
(PMID:23836881) MGI
Ensembl
PMID:23836881 GO_REF:0000107 NCBI chrNW_004936551:359,134...534,672
Ensembl chrNW_004936551:359,362...532,211
JBrowse link
G Dcaf1 DDB1 and CUL4 associated factor 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936529:2,786,252...2,856,516
Ensembl chrNW_004936529:2,786,252...2,856,967
JBrowse link
G Dclre1c DNA cross-link repair 1C involved_in
acts_upstream_of_or_within
IEA
ISO
(PMID:23836881) Ensembl
MGI
PMID:23836881 GO_REF:0000107 NCBI chrNW_004936613:1,467,797...1,501,107
Ensembl chrNW_004936613:1,470,365...1,501,138
JBrowse link
G Hmgb1 high mobility group box 1 involved_in ISO (PMID:9166431) UniProt PMID:9166431 NCBI chrNW_004936472:25,236,728...25,246,585
Ensembl chrNW_004936472:25,236,728...25,246,580
JBrowse link
G Lig1 DNA ligase 1 NOT|involved_in ISO (PMID:9809069) UniProt PMID:9809069 NCBI chrNW_004936664:2,242,916...2,276,286
Ensembl chrNW_004936664:2,242,897...2,276,715
JBrowse link
G Lig3 DNA ligase 3 NOT|involved_in ISO (PMID:9809069) UniProt PMID:9809069 NCBI chrNW_004936538:206,179...228,487
Ensembl chrNW_004936538:206,839...226,441
JBrowse link
G Lig4 DNA ligase 4 involved_in
acts_upstream_of_or_within
IEA
ISO
(PMID:10716994)
(PMID:15194694)
Ensembl
MGI
PMID:10716994 PMID:15194694 GO_REF:0000107 NCBI chrNW_004936472:3,861,833...3,867,943
Ensembl chrNW_004936472:3,861,866...3,867,933
JBrowse link
G Prkdc protein kinase, DNA-activated, catalytic subunit involved_in
acts_upstream_of_or_within
IEA
ISO
(PMID:23836881) Ensembl
MGI
PMID:23836881 GO_REF:0000107 NCBI chrNW_004936590:4,722,914...4,887,615
Ensembl chrNW_004936590:4,722,873...4,890,156
JBrowse link
G Rag1 recombination activating 1 involved_in
acts_upstream_of_or_within
IEA
ISO
(PMID:2360047) TreeGrafter
MGI
UniProt
Ensembl
InterPro
PMID:2360047 GO_REF:0000002 GO_REF:0000104 GO_REF:0000107 GO_REF:0000118 NCBI chrNW_004936533:1,817,135...1,827,393
Ensembl chrNW_004936533:1,817,135...1,827,393
JBrowse link
G Rag2 recombination activating 2 involved_in
acts_upstream_of_or_within
IEA
ISO
(PMID:2360047) TreeGrafter
MGI
Ensembl
PMID:2360047 GO_REF:0000107 GO_REF:0000118 NCBI chrNW_004936533:1,801,207...1,807,431
Ensembl chrNW_004936533:1,801,391...1,807,431
JBrowse link
G Xrcc4 X-ray repair cross complementing 4 acts_upstream_of_or_within ISO (PMID:10716994) MGI PMID:10716994 NCBI chrNW_004936469:2,248,367...2,495,215
Ensembl chrNW_004936469:2,248,039...2,495,226
JBrowse link
G Xrcc6 X-ray repair cross complementing 6 acts_upstream_of_or_within ISO (PMID:10716994) MGI PMID:10716994 NCBI chrNW_004936492:303,843...325,812
Ensembl chrNW_004936492:300,057...325,845
JBrowse link

Term paths to the root
Path 1
Term Annotations click to browse term
  biological_process 17411
    immune system process 2308
      immune system development 231
        hematopoietic or lymphoid organ development + 130
        somatic diversification of immune receptors + 83
        tolerance induction + 28
Path 2
Term Annotations click to browse term
  biological_process 17411
    developmental process 6424
      anatomical structure development 6039
        multicellular organism development 4888
          system development 4254
            immune system development 231
              hematopoietic or lymphoid organ development + 130
              somatic diversification of immune receptors + 83
              tolerance induction + 28
paths to the root