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ONTOLOGY REPORT - ANNOTATIONS

Term:immune system development
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Accession:GO:0002520 term browser browse the term
Definition:The process whose specific outcome is the progression of an organismal system whose objective is to provide calibrated responses by an organism to a potential internal or invasive threat, over time, from its formation to the mature structure. A system is a regularly interacting or interdependent group of organs or tissues that work together to carry out a given biological process.


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immune system development term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G BCL2 BCL2 apoptosis regulator involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:8372353)
(PMID:7812968)		 Ensembl
MGI		 PMID:7812968 PMID:8372353 GO_REF:0000107 NCBI chr18:63,123,346...63,320,090
Ensembl chr18:63,123,346...63,320,128 		JBrowse link
G CACNA1C calcium voltage-gated channel subunit alpha1 C involved_in IMP (PMID:15454078) BHF-UCL PMID:15454078 NCBI chr12:1,970,780...2,697,950
Ensembl chr12:1,970,772...2,697,950 		JBrowse link
G GATA3 GATA binding protein 3 involved_in IBA GO_Central GO_REF:0000033 NCBI chr10:8,045,333...8,075,198
Ensembl chr10:8,045,378...8,075,198 		JBrowse link
G RO60 Ro60, Y RNA binding protein involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:12788971) Ensembl
MGI		 PMID:12788971 GO_REF:0000107 NCBI chr 1:193,059,612...193,091,777
Ensembl chr 1:193,059,454...193,091,777 		JBrowse link
G SMAD3 SMAD family member 3 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:15183723) Ensembl
MGI		 PMID:15183723 GO_REF:0000107 NCBI chr15:67,065,602...67,195,169
Ensembl chr15:67,063,763...67,195,173 		JBrowse link
bone marrow development term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ASXL1 ASXL transcriptional regulator 1 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:19861679) Ensembl
MGI		 PMID:19861679 GO_REF:0000107 NCBI chr20:32,358,331...32,439,319
Ensembl chr20:32,358,330...32,439,319 		JBrowse link
G CTC1 CST telomere replication complex component 1 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:22531781) Ensembl
MGI		 PMID:22531781 GO_REF:0000107 NCBI chr17:8,224,815...8,248,056
Ensembl chr17:8,224,815...8,248,058 		JBrowse link
G FANCB FA complementation group B acts_upstream_of_or_within ISO (PMID:26658157) MGI PMID:26658157 NCBI chr  X:14,689,524...14,873,069
Ensembl chr  X:14,690,388...14,873,255 		JBrowse link
G HOXB4 homeobox B4 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:14962901) Ensembl
MGI		 PMID:14962901 GO_REF:0000107 NCBI chr17:48,575,507...48,578,350
Ensembl chr17:48,575,507...48,578,350 		JBrowse link
G LIPA lipase A, lysosomal acid type involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:20348241) Ensembl
MGI		 PMID:20348241 GO_REF:0000107 NCBI chr10:89,213,572...89,251,775
Ensembl chr10:89,213,569...89,414,557 		JBrowse link
G LRP5 LDL receptor related protein 5 involved_in IMP (PMID:17680723) BHF-UCL PMID:17680723 NCBI chr11:68,298,412...68,449,275
Ensembl chr11:68,312,591...68,449,275 		JBrowse link
G LRRC17 leucine rich repeat containing 17 involved_in IEA
ISS		 Ensembl
UniProt		 GO_REF:0000024 GO_REF:0000107 NCBI chr 7:102,913,000...102,945,111
Ensembl chr 7:102,913,000...102,945,111 		JBrowse link
G MIR188 microRNA 188 acts_upstream_of_or_within ISO (PMID:25751060) MGI PMID:25751060 NCBI chr  X:50,003,503...50,003,588
Ensembl chr  X:50,003,503...50,003,588 		JBrowse link
G PTPRC protein tyrosine phosphatase receptor type C involved_in IMP (PMID:21911094) UniProt PMID:21911094 NCBI chr 1:198,638,713...198,757,476
Ensembl chr 1:198,638,457...198,759,342 		JBrowse link
G SBDS SBDS ribosome maturation factor involved_in IMP (PMID:15342903) UniProt PMID:15342903 NCBI chr 7:66,987,680...66,995,586
Ensembl chr 7:66,987,680...66,995,693 		JBrowse link
G TP53 tumor protein p53 involved_in IMP (PMID:30146126) UniProt PMID:30146126 NCBI chr17:7,668,421...7,687,490
Ensembl chr17:7,661,779...7,687,546 		JBrowse link
central tolerance induction term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G FOXJ1 forkhead box J1 involved_in ISS
IEA		 BHF-UCL
Ensembl		 GO_REF:0000024 GO_REF:0000107 NCBI chr17:76,136,333...76,141,245
Ensembl chr17:76,136,333...76,141,245 		JBrowse link
central tolerance induction to self antigen term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G AIRE autoimmune regulator involved_in IMP
IBA		 (PMID:26084028) UniProt
GO_Central		 PMID:26084028 GO_REF:0000033 NCBI chr21:44,285,876...44,298,648
Ensembl chr21:44,285,838...44,298,648 		JBrowse link
hematopoietic or lymphoid organ development term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ASXL1 ASXL transcriptional regulator 1 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:19861679) Ensembl
MGI		 PMID:19861679 GO_REF:0000107 NCBI chr20:32,358,331...32,439,319
Ensembl chr20:32,358,330...32,439,319 		JBrowse link
G LTBR lymphotoxin beta receptor involved_in IEA InterPro GO_REF:0000002 NCBI chr12:6,375,160...6,391,566
Ensembl chr12:6,375,045...6,391,571 		JBrowse link
immunoglobulin heavy chain V-D-J recombination term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G POLB DNA polymerase beta involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:24388753) Ensembl
MGI		 PMID:24388753 GO_REF:0000107 NCBI chr 8:42,338,494...42,371,808
Ensembl chr 8:42,338,454...42,371,808 		JBrowse link
G YY1 YY1 transcription factor involved_in IEA Ensembl GO_REF:0000107 NCBI chr14:100,239,144...100,282,788
Ensembl chr14:100,238,298...100,282,788 		JBrowse link
immunoglobulin V(D)J recombination term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G CYREN cell cycle regulator of NHEJ involved_in IEA
ISS		 Ensembl
UniProt		 GO_REF:0000024 GO_REF:0000107 NCBI chr 7:135,092,303...135,172,469
Ensembl chr 7:135,092,363...135,170,795 		JBrowse link
G FOXP1 forkhead box P1 acts_upstream_of_or_within ISO (PMID:16819554) MGI PMID:16819554 NCBI chr 3:70,954,708...71,583,978
Ensembl chr 3:70,954,693...71,583,978 		JBrowse link
G LIG4 DNA ligase 4 involved_in
acts_upstream_of_or_within		 IEA
ISO
IBA		 (PMID:9823897) Ensembl
MGI
GO_Central		 PMID:9823897 GO_REF:0000033 GO_REF:0000107 NCBI chr13:108,207,442...108,218,349
Ensembl chr13:108,207,439...108,218,368 		JBrowse link
G NHEJ1 non-homologous end joining factor 1 involved_in IDA (PMID:20558749) UniProt PMID:20558749 NCBI chr 2:219,069,357...219,160,815
Ensembl chr 2:219,069,355...219,160,869 		JBrowse link
G PRKDC protein kinase, DNA-activated, catalytic subunit involved_in
acts_upstream_of_or_within		 IEA
ISO
IBA		 (PMID:9768755) Ensembl
MGI
GO_Central		 PMID:9768755 GO_REF:0000033 GO_REF:0000107 NCBI chr 8:47,773,111...47,960,136
Ensembl chr 8:47,773,111...47,960,178 		JBrowse link
G TCF3 transcription factor 3 acts_upstream_of_or_within
involved_in		 IDA
IBA		 (PMID:16428437) MGI
GO_Central		 PMID:16428437 GO_REF:0000033 NCBI chr19:1,609,292...1,652,615
Ensembl chr19:1,609,291...1,652,615 		JBrowse link
G XRCC4 X-ray repair cross complementing 4 involved_in
acts_upstream_of_or_within		 IBA
ISO		 (PMID:9875844) GO_Central
MGI		 PMID:9875844 GO_REF:0000033 NCBI chr 5:83,077,547...83,374,473
Ensembl chr 5:83,077,498...83,353,787 		JBrowse link
isotype switching term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G AICDA activation induced cytidine deaminase involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:17713479) Ensembl
MGI		 PMID:17713479 GO_REF:0000107 NCBI chr12:8,602,170...8,612,859
Ensembl chr12:8,602,155...8,613,242 		JBrowse link
G ATAD5 ATPase family AAA domain containing 5 involved_in
acts_upstream_of		 IEA
ISO		 (PMID:25404367) Ensembl
MGI		 PMID:25404367 GO_REF:0000107 NCBI chr17:30,831,966...30,895,869
Ensembl chr17:30,831,966...30,895,869 		JBrowse link
G BATF basic leucine zipper ATF-like transcription factor involved_in ISS
IEA		 UniProt
Ensembl		 GO_REF:0000024 GO_REF:0000107 NCBI chr14:75,522,469...75,546,992
Ensembl chr14:75,522,455...75,546,993 		JBrowse link
G CD40LG CD40 ligand involved_in ISS
IEA		 UniProt
Ensembl		 GO_REF:0000024 GO_REF:0000107 NCBI chr  X:136,648,158...136,660,390
Ensembl chr  X:136,648,158...136,660,390 		JBrowse link
G ERCC1 ERCC excision repair 1, endonuclease non-catalytic subunit involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:15280420) Ensembl
MGI		 PMID:15280420 GO_REF:0000107 NCBI chr19:45,407,334...45,451,547
Ensembl chr19:45,407,334...45,478,828 		JBrowse link
G EXO1 exonuclease 1 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:14716311) Ensembl
MGI		 PMID:14716311 GO_REF:0000107 NCBI chr 1:241,847,986...241,889,939
Ensembl chr 1:241,847,967...241,895,148 		JBrowse link
G EXOSC3 exosome component 3 involved_in ISS
IEA		 UniProt
Ensembl		 GO_REF:0000024 GO_REF:0000107 NCBI chr 9:37,779,714...37,785,092
Ensembl chr 9:37,759,234...37,832,117 		JBrowse link
G EXOSC6 exosome component 6 involved_in ISS
IEA		 UniProt
Ensembl		 GO_REF:0000024 GO_REF:0000107 NCBI chr16:70,246,778...70,251,940
Ensembl chr16:70,246,778...70,251,940 		JBrowse link
G LIG4 DNA ligase 4 involved_in
acts_upstream_of_or_within		 IEA
ISO
ISS		 (PMID:17713479) Ensembl
MGI
UniProt		 PMID:17713479 GO_REF:0000024 GO_REF:0000107 NCBI chr13:108,207,442...108,218,349
Ensembl chr13:108,207,439...108,218,368 		JBrowse link
G MLH1 mutL homolog 1 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:12743174) Ensembl
MGI		 PMID:12743174 GO_REF:0000107 NCBI chr 3:36,993,466...37,050,846
Ensembl chr 3:36,993,226...37,050,896 		JBrowse link
G MSH2 mutS homolog 2 involved_in
acts_upstream_of_or_within		 IEA
ISO
ISS		 (PMID:10430621)
(PMID:12743174)		 Ensembl
MGI
BHF-UCL		 PMID:10430621 PMID:12743174 GO_REF:0000024 GO_REF:0000107 NCBI chr 2:47,403,067...47,709,830
Ensembl chr 2:47,403,067...47,663,146 		JBrowse link
G MSH6 mutS homolog 6 involved_in
acts_upstream_of_or_within		 ISS
ISO
IEA		 (PMID:16618598)
(PMID:17015724)		 BHF-UCL
MGI
Ensembl		 PMID:16618598 PMID:17015724 GO_REF:0000024 GO_REF:0000107 NCBI chr 2:47,783,145...47,810,101
Ensembl chr 2:47,695,530...47,810,063 		JBrowse link
G NBN nibrin involved_in IEA Ensembl GO_REF:0000107 NCBI chr 8:89,933,331...89,984,667
Ensembl chr 8:89,924,515...90,003,228 		JBrowse link
G NFKBIZ NFKB inhibitor zeta involved_in IEA Ensembl GO_REF:0000107 NCBI chr 3:101,827,990...101,861,022
Ensembl chr 3:101,827,991...101,861,022 		JBrowse link
G PCYT1A phosphate cytidylyltransferase 1A, choline involved_in ISS
IEA		 UniProt
Ensembl		 GO_REF:0000024 GO_REF:0000107 NCBI chr 3:196,234,368...196,287,726
Ensembl chr 3:196,214,222...196,287,957 		JBrowse link
G RNF168 ring finger protein 168 involved_in ISS UniProt GO_REF:0000024 NCBI chr 3:196,468,783...196,503,768
Ensembl chr 3:196,468,783...196,503,768 		JBrowse link
G RNF8 ring finger protein 8 involved_in ISS
IEA		 UniProt
Ensembl		 GO_REF:0000024 GO_REF:0000107 NCBI chr 6:37,353,983...37,394,734
Ensembl chr 6:37,353,979...37,394,734 		JBrowse link
G SANBR SANT and BTB domain regulator of CSR involved_in ISS
IBA
IEA		 UniProt
GO_Central
Ensembl		 GO_REF:0000024 GO_REF:0000033 GO_REF:0000107 NCBI chr 2:61,065,871...61,138,032
Ensembl chr 2:61,065,871...61,138,034 		JBrowse link
G SWAP70 switching B cell complex subunit SWAP70 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:9642267) Ensembl
MGI		 PMID:9642267 GO_REF:0000107 NCBI chr11:9,664,077...9,752,993
Ensembl chr11:9,664,077...9,752,993 		JBrowse link
G UNG uracil DNA glycosylase involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:17015724) Ensembl
MGI		 PMID:17015724 GO_REF:0000107 NCBI chr12:109,097,597...109,110,992
Ensembl chr12:109,097,597...109,126,725 		JBrowse link
G XRCC4 X-ray repair cross complementing 4 acts_upstream_of_or_within ISO (PMID:17713479) MGI PMID:17713479 NCBI chr 5:83,077,547...83,374,473
Ensembl chr 5:83,077,498...83,353,787 		JBrowse link
isotype switching to IgA isotypes term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G CCR6 C-C motif chemokine receptor 6 involved_in IEA
ISS		 Ensembl
UniProt		 GO_REF:0000024 GO_REF:0000107 NCBI chr 6:167,111,795...167,139,141
Ensembl chr 6:167,111,807...167,139,141 		JBrowse link
isotype switching to IgD isotypes term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G FDCSP follicular dendritic cell secreted protein acts_upstream_of_positive_effect ISO (PMID:17548624) MGI PMID:17548624 NCBI chr 4:70,226,124...70,235,252
Ensembl chr 4:70,226,124...70,235,252 		JBrowse link
isotype switching to IgE isotypes term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G BCL6 BCL6 transcription repressor involved_in
acts_upstream_of		 IEA
ISO		 (PMID:10490661) Ensembl
MGI		 PMID:10490661 GO_REF:0000107 NCBI chr 3:187,721,377...187,745,468
Ensembl chr 3:187,721,377...187,745,725 		JBrowse link
G FDCSP follicular dendritic cell secreted protein acts_upstream_of_or_within_negative_effect ISO (PMID:17548624) MGI PMID:17548624 NCBI chr 4:70,226,124...70,235,252
Ensembl chr 4:70,226,124...70,235,252 		JBrowse link
G FOXP3 forkhead box P3 involved_in
acts_upstream_of		 IEA
ISO		 (PMID:16275384) Ensembl
MGI		 PMID:16275384 GO_REF:0000107 NCBI chr  X:49,250,438...49,264,710
Ensembl chr  X:49,250,438...49,264,800 		JBrowse link
G IL4 interleukin 4 acts_upstream_of ISO (PMID:14988498) MGI PMID:14988498 NCBI chr 5:132,673,989...132,682,678
Ensembl chr 5:132,673,986...132,682,678 		JBrowse link
G STAT6 signal transducer and activator of transcription 6 involved_in
acts_upstream_of		 IEA
ISO		 (PMID:10490661) Ensembl
MGI		 PMID:10490661 GO_REF:0000107 NCBI chr12:57,095,408...57,111,362
Ensembl chr12:57,095,408...57,132,139 		JBrowse link
isotype switching to IgG isotypes term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G FDCSP follicular dendritic cell secreted protein acts_upstream_of_or_within_negative_effect ISO (PMID:17548624) MGI PMID:17548624 NCBI chr 4:70,226,124...70,235,252
Ensembl chr 4:70,226,124...70,235,252 		JBrowse link
G HSPD1 heat shock protein family D (Hsp60) member 1 involved_in IDA (PMID:16148103) BHF-UCL PMID:16148103 NCBI chr 2:197,486,584...197,500,274
Ensembl chr 2:197,486,584...197,516,737 		JBrowse link
G IL4 interleukin 4 acts_upstream_of ISO (PMID:14988498) MGI PMID:14988498 NCBI chr 5:132,673,989...132,682,678
Ensembl chr 5:132,673,986...132,682,678 		JBrowse link
lymph node development term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G CCL21 C-C motif chemokine ligand 21 acts_upstream_of_or_within ISO (PMID:12732660) MGI PMID:12732660 NCBI chr 9:34,709,005...34,710,136
Ensembl chr 9:34,709,005...34,710,136 		JBrowse link
G CD248 CD248 molecule involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:20432232) Ensembl
MGI		 PMID:20432232 GO_REF:0000107 NCBI chr11:66,314,494...66,317,044
Ensembl chr11:66,314,494...66,317,044 		JBrowse link
G CD2AP CD2 associated protein involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:24218450) Ensembl
MGI		 PMID:24218450 GO_REF:0000107 NCBI chr 6:47,477,789...47,627,263
Ensembl chr 6:47,477,789...47,627,263 		JBrowse link
G CXCL13 C-X-C motif chemokine ligand 13 acts_upstream_of_or_within
involved_in		 ISO (PMID:12732660)
(PMID:19783990)		 MGI
BHF-UCL		 PMID:12732660 PMID:19783990 NCBI chr 4:77,511,753...77,611,834
Ensembl chr 4:77,511,753...77,611,834 		JBrowse link
G CXCR5 C-X-C motif chemokine receptor 5 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:12732660) InterPro
MGI
Ensembl		 PMID:12732660 GO_REF:0000002 GO_REF:0000107 NCBI chr11:118,883,892...118,897,787
Ensembl chr11:118,883,892...118,897,787 		JBrowse link
G FADD Fas associated via death domain involved_in IEA
ISS		 Ensembl
UniProt		 GO_REF:0000024 GO_REF:0000107 NCBI chr11:70,203,296...70,207,390
Ensembl chr11:70,203,296...70,207,390 		JBrowse link
G FLT3 fms related receptor tyrosine kinase 3 acts_upstream_of_or_within ISO (PMID:20457904) MGI PMID:20457904 NCBI chr13:28,003,274...28,100,576
Ensembl chr13:28,003,274...28,100,592 		JBrowse link
G IKZF1 IKAROS family zinc finger 1 acts_upstream_of_or_within ISO (PMID:7923373) MGI PMID:7923373 NCBI chr 7:50,303,455...50,405,101
Ensembl chr 7:50,304,068...50,405,101 		JBrowse link
G IL15 interleukin 15 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:10704459) Ensembl
MGI		 PMID:10704459 GO_REF:0000107 NCBI chr 4:141,636,583...141,733,987
Ensembl chr 4:141,636,583...141,733,987 		JBrowse link
G IL7R interleukin 7 receptor involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:12732660) Ensembl
MGI		 PMID:12732660 GO_REF:0000107 NCBI chr 5:35,856,891...35,879,603
Ensembl chr 5:35,852,695...35,879,603 		JBrowse link
G LTA lymphotoxin alpha involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:9368616)
(PMID:10415063)
(PMID:9565643)
(PMID:7636227)
(PMID:8171322)		 Ensembl
MGI		 PMID:7636227 PMID:8171322 PMID:9368616 PMID:9565643 PMID:10415063 GO_REF:0000107 NCBI chr 6:31,560,610...31,574,324
Ensembl chr 6:31,572,054...31,574,324 		JBrowse link
G LTB lymphotoxin beta involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:9256477)
(PMID:9133428)		 Ensembl
MGI		 PMID:9133428 PMID:9256477 GO_REF:0000107 NCBI chr 6:31,580,558...31,582,425
Ensembl chr 6:31,580,525...31,582,522 		JBrowse link
G NKX2-3 NK2 homeobox 3 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:10790368)
(PMID:10926756)		 Ensembl
MGI		 PMID:10790368 PMID:10926756 GO_REF:0000107 NCBI chr10:99,532,942...99,536,524
Ensembl chr10:99,532,942...99,536,524 		JBrowse link
G PDPN podoplanin involved_in ISS UniProt GO_REF:0000024 NCBI chr 1:13,583,757...13,617,957
Ensembl chr 1:13,583,465...13,617,957 		JBrowse link
G POLB DNA polymerase beta involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:24388753) Ensembl
MGI		 PMID:24388753 GO_REF:0000107 NCBI chr 8:42,338,494...42,371,808
Ensembl chr 8:42,338,454...42,371,808 		JBrowse link
G RC3H1 ring finger and CCCH-type domains 1 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:23583643) Ensembl
MGI		 PMID:23583643 GO_REF:0000107 NCBI chr 1:173,931,084...174,022,357
Ensembl chr 1:173,931,084...174,022,357 		JBrowse link
G RC3H2 ring finger and CCCH-type domains 2 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:23583643) Ensembl
MGI		 PMID:23583643 GO_REF:0000107 NCBI chr 9:122,844,556...122,905,359
Ensembl chr 9:122,844,556...122,905,359 		JBrowse link
G RCBTB2 RCC1 and BTB domain containing protein 2 acts_upstream_of_or_within
involved_in		 ISO
IEA		 (PMID:26291700) MGI
Ensembl		 PMID:26291700 GO_REF:0000107 NCBI chr13:48,488,963...48,535,895
Ensembl chr13:48,488,963...48,533,256 		JBrowse link
G RIPK3 receptor interacting serine/threonine kinase 3 involved_in ISS
IEA		 UniProt
Ensembl		 GO_REF:0000024 GO_REF:0000107 NCBI chr14:24,336,025...24,339,991
Ensembl chr14:24,336,025...24,340,022 		JBrowse link
G RORC RAR related orphan receptor C involved_in
acts_upstream_of_or_within		 ISS
ISO		 (PMID:14691482) UniProt
MGI		 PMID:14691482 GO_REF:0000024 NCBI chr 1:151,806,071...151,831,802
Ensembl chr 1:151,806,071...151,831,845 		JBrowse link
G SPNS2 SPNS lysolipid transporter 2, sphingosine-1-phosphate involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:23180825) Ensembl
MGI		 PMID:23180825 GO_REF:0000107 NCBI chr17:4,498,881...4,539,035
Ensembl chr17:4,498,881...4,539,035 		JBrowse link
G TGFB1 transforming growth factor beta 1 involved_in
acts_upstream_of_or_within		 IEA
ISO
ISS		 (PMID:1436033) Ensembl
MGI
UniProt		 PMID:1436033 GO_REF:0000024 GO_REF:0000107 NCBI chr19:41,330,323...41,353,922
Ensembl chr19:41,301,587...41,353,922 		JBrowse link
G TNFRSF11A TNF receptor superfamily member 11a involved_in
acts_upstream_of_or_within		 IEA
ISO
IBA		 (PMID:10500098) Ensembl
MGI
GO_Central		 PMID:10500098 GO_REF:0000033 GO_REF:0000107 NCBI chr18:62,325,310...62,391,288
Ensembl chr18:62,325,287...62,391,288 		JBrowse link
G TOX thymocyte selection associated high mobility group box involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:20818394) Ensembl
MGI		 PMID:20818394 GO_REF:0000107 NCBI chr 8:58,805,412...59,119,147
Ensembl chr 8:58,805,412...59,119,147 		JBrowse link
G TRAF3IP2 TRAF3 interacting protein 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 6:111,555,381...111,605,878
Ensembl chr 6:111,555,381...111,606,906 		JBrowse link
mucosa-associated lymphoid tissue development term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G NKX2-3 NK2 homeobox 3 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:10926756) Ensembl
MGI		 PMID:10926756 GO_REF:0000107 NCBI chr10:99,532,942...99,536,524
Ensembl chr10:99,532,942...99,536,524 		JBrowse link
G RORC RAR related orphan receptor C acts_upstream_of_or_within ISO (PMID:15247480) MGI PMID:15247480 NCBI chr 1:151,806,071...151,831,802
Ensembl chr 1:151,806,071...151,831,845 		JBrowse link
natural killer cell tolerance induction term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G HAVCR2 hepatitis A virus cellular receptor 2 involved_in IMP (PMID:25578313) UniProt PMID:25578313 NCBI chr 5:157,085,832...157,109,044
Ensembl chr 5:157,085,422...157,142,869 		JBrowse link
G HLA-E major histocompatibility complex, class I, E involved_in IDA (PMID:9486650) UniProt PMID:9486650 NCBI chr 6:30,489,509...30,494,194
Ensembl chr 6:30,489,509...30,494,194 		JBrowse link
G LGALS9 galectin 9 involved_in IMP (PMID:25578313) UniProt PMID:25578313 NCBI chr17:27,631,188...27,649,560
Ensembl chr17:27,629,798...27,649,560 		JBrowse link
negative regulation of isotype switching term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G PARP3 poly(ADP-ribose) polymerase family member 3 involved_in IEA
ISS		 Ensembl
UniProt		 GO_REF:0000024 GO_REF:0000107 NCBI chr 3:51,942,363...51,948,867
Ensembl chr 3:51,942,345...51,948,867 		JBrowse link
negative regulation of isotype switching to IgE isotypes term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G BCL6 BCL6 transcription repressor involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:10490661) Ensembl
MGI		 PMID:10490661 GO_REF:0000107 NCBI chr 3:187,721,377...187,745,468
Ensembl chr 3:187,721,377...187,745,725 		JBrowse link
G FOXP3 forkhead box P3 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:16275384) Ensembl
MGI		 PMID:16275384 GO_REF:0000107 NCBI chr  X:49,250,438...49,264,710
Ensembl chr  X:49,250,438...49,264,800 		JBrowse link
G NDFIP1 Nedd4 family interacting protein 1 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:17137798) Ensembl
MGI		 PMID:17137798 GO_REF:0000107 NCBI chr 5:142,108,779...142,154,440
Ensembl chr 5:142,108,779...142,154,440 		JBrowse link
negative regulation of T cell anergy term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G CD86 CD86 molecule ISO RGD PMID:18424705 RGD:4892228 NCBI chr 3:122,055,362...122,121,136
Ensembl chr 3:122,055,362...122,121,139 		JBrowse link
negative regulation of tolerance induction term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G PDCD1 programmed cell death 1 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:23636058) Ensembl
MGI		 PMID:23636058 GO_REF:0000107 NCBI chr 2:241,849,884...241,858,894
Ensembl chr 2:241,849,884...241,858,894 		JBrowse link
peripheral B cell tolerance induction term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G HLA-G major histocompatibility complex, class I, G involved_in IDA (PMID:24453251) UniProt PMID:24453251 NCBI chr 6:29,826,474...29,831,021
Ensembl chr 6:29,826,967...29,831,125 		JBrowse link
peripheral T cell tolerance induction term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G AIRE autoimmune regulator involved_in IEA
IBA
ISS		 Ensembl
GO_Central
UniProt		 GO_REF:0000024 GO_REF:0000033 GO_REF:0000107 NCBI chr21:44,285,876...44,298,648
Ensembl chr21:44,285,838...44,298,648 		JBrowse link
Peyer's patch development term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ADA adenosine deaminase involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:10720488) Ensembl
MGI		 PMID:10720488 GO_REF:0000107 NCBI chr20:44,619,522...44,651,699
Ensembl chr20:44,584,896...44,652,252 		JBrowse link
G CACNB4 calcium voltage-gated channel auxiliary subunit beta 4 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:5037658) Ensembl
MGI		 PMID:5037658 GO_REF:0000107 NCBI chr 2:151,832,771...152,099,167
Ensembl chr 2:151,832,771...152,099,167 		JBrowse link
G ID2 inhibitor of DNA binding 2 acts_upstream_of_or_within ISO (PMID:17452521) MGI PMID:17452521 NCBI chr 2:8,682,056...8,684,461
Ensembl chr 2:8,678,845...8,684,461 		JBrowse link
G IKZF1 IKAROS family zinc finger 1 acts_upstream_of_or_within ISO (PMID:7923373) MGI PMID:7923373 NCBI chr 7:50,303,455...50,405,101
Ensembl chr 7:50,304,068...50,405,101 		JBrowse link
G NKX2-3 NK2 homeobox 3 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:10790368) Ensembl
MGI		 PMID:10790368 GO_REF:0000107 NCBI chr10:99,532,942...99,536,524
Ensembl chr10:99,532,942...99,536,524 		JBrowse link
G RORC RAR related orphan receptor C involved_in ISS UniProt GO_REF:0000024 NCBI chr 1:151,806,071...151,831,802
Ensembl chr 1:151,806,071...151,831,845 		JBrowse link
G STAT5A signal transducer and activator of transcription 5A acts_upstream_of_or_within ISO (PMID:15294943) MGI PMID:15294943 NCBI chr17:42,287,439...42,311,943
Ensembl chr17:42,287,547...42,311,943 		JBrowse link
G STAT5B signal transducer and activator of transcription 5B involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:15294943) Ensembl
MGI		 PMID:15294943 GO_REF:0000107 NCBI chr17:42,199,177...42,288,370
Ensembl chr17:42,199,176...42,288,633 		JBrowse link
G TCF3 transcription factor 3 acts_upstream_of_or_within ISO (PMID:17452521) MGI PMID:17452521 NCBI chr19:1,609,292...1,652,615
Ensembl chr19:1,609,291...1,652,615 		JBrowse link
G TOX thymocyte selection associated high mobility group box involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:20818394) Ensembl
MGI		 PMID:20818394 GO_REF:0000107 NCBI chr 8:58,805,412...59,119,147
Ensembl chr 8:58,805,412...59,119,147 		JBrowse link
Peyer's patch morphogenesis term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ARTN artemin involved_in IEA Ensembl GO_REF:0000107 NCBI chr 1:43,933,801...43,937,240
Ensembl chr 1:43,933,320...43,937,240 		JBrowse link
G FOXL1 forkhead box L1 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:12648490) Ensembl
MGI		 PMID:12648490 GO_REF:0000107 NCBI chr16:86,578,549...86,583,478
Ensembl chr16:86,576,368...86,583,478 		JBrowse link
G RET ret proto-oncogene involved_in ISS
IEA		 UniProt
Ensembl		 GO_REF:0000024 GO_REF:0000107 NCBI chr10:43,077,069...43,130,351
Ensembl chr10:43,077,064...43,130,351 		JBrowse link
positive regulation of B cell tolerance induction term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G TGFBR2 transforming growth factor beta receptor 2 involved_in
acts_upstream_of_or_within		 IEA
ISO
ISS		 (PMID:16973387) Ensembl
MGI
BHF-UCL		 PMID:16973387 GO_REF:0000024 GO_REF:0000107 NCBI chr 3:30,606,356...30,694,142
Ensembl chr 3:30,606,478...30,694,249 		JBrowse link
positive regulation of central B cell tolerance induction term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G FOXJ1 forkhead box J1 involved_in IEA
ISS		 Ensembl
BHF-UCL		 GO_REF:0000024 GO_REF:0000107 NCBI chr17:76,136,333...76,141,245
Ensembl chr17:76,136,333...76,141,245 		JBrowse link
positive regulation of interleukin-4-dependent isotype switching to IgE isotypes term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G TNFSF4 TNF superfamily member 4 involved_in ISS BHF-UCL GO_REF:0000024 NCBI chr 1:173,172,870...173,450,733
Ensembl chr 1:173,162,645...173,477,583 		JBrowse link
positive regulation of isotype switching term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G EXOSC3 exosome component 3 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:21255825) Ensembl
MGI		 PMID:21255825 GO_REF:0000107 NCBI chr 9:37,779,714...37,785,092
Ensembl chr 9:37,759,234...37,832,117 		JBrowse link
G EXOSC6 exosome component 6 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:21255825) Ensembl
MGI		 PMID:21255825 GO_REF:0000107 NCBI chr16:70,246,778...70,251,940
Ensembl chr16:70,246,778...70,251,940 		JBrowse link
G HMCES 5-hydroxymethylcytosine binding, ES cell specific involved_in ISS
IEA		 UniProt
Ensembl		 GO_REF:0000024 GO_REF:0000107 NCBI chr 3:129,278,832...129,306,186
Ensembl chr 3:129,278,828...129,306,186 		JBrowse link
G KMT5B lysine methyltransferase 5B involved_in IEA
ISS		 Ensembl
UniProt		 GO_REF:0000024 GO_REF:0000107 NCBI chr11:68,154,863...68,213,648
Ensembl chr11:68,154,863...68,213,852 		JBrowse link
G KMT5C lysine methyltransferase 5C involved_in ISS
IEA		 UniProt
Ensembl		 GO_REF:0000024 GO_REF:0000107 NCBI chr19:55,339,876...55,348,121
Ensembl chr19:55,339,853...55,348,121 		JBrowse link
G MAD2L2 mitotic arrest deficient 2 like 2 involved_in IDA (PMID:29656893) UniProt PMID:29656893 NCBI chr 1:11,674,480...11,691,830
Ensembl chr 1:11,657,230...11,691,811 		JBrowse link
G PAXIP1 PAX interacting protein 1 involved_in ISS
IEA		 UniProt
Ensembl		 GO_REF:0000024 GO_REF:0000107 NCBI chr 7:154,943,690...155,003,411
Ensembl chr 7:154,943,687...155,003,124 		JBrowse link
G RIF1 replication timing regulatory factor 1 involved_in ISS
IEA		 UniProt
Ensembl		 GO_REF:0000024 GO_REF:0000107 NCBI chr 2:151,409,902...151,534,435
Ensembl chr 2:151,409,883...151,508,013 		JBrowse link
G SHLD1 shieldin complex subunit 1 involved_in IDA
IBA		 (PMID:29656893) UniProt
GO_Central		 PMID:29656893 GO_REF:0000033 NCBI chr20:5,750,193...5,864,395
Ensembl chr20:5,750,393...5,864,395 		JBrowse link
G SHLD2 shieldin complex subunit 2 involved_in IDA (PMID:29656893) UniProt PMID:29656893 NCBI chr10:87,094,473...87,191,465
Ensembl chr10:87,094,161...87,191,465 		JBrowse link
G SHLD3 shieldin complex subunit 3 involved_in IDA
IBA		 (PMID:29656893) UniProt
GO_Central		 PMID:29656893 GO_REF:0000033 NCBI chr 5:65,625,027...65,630,928
Ensembl chr 5:65,625,027...65,630,928 		JBrowse link
G TFRC transferrin receptor involved_in IDA (PMID:26642240) UniProt PMID:26642240 NCBI chr 3:196,049,284...196,082,090
Ensembl chr 3:196,012,511...196,082,153 		JBrowse link
G TP53BP1 tumor protein p53 binding protein 1 involved_in IDA
IMP
IEA		 (PMID:23345425)
(PMID:23760478)		 UniProt
Ensembl		 PMID:23345425 PMID:23760478 GO_REF:0000107 NCBI chr15:43,403,061...43,510,640
Ensembl chr15:43,403,061...43,510,728 		JBrowse link
positive regulation of isotype switching to IgA isotypes term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G MLH1 mutL homolog 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 3:36,993,466...37,050,846
Ensembl chr 3:36,993,226...37,050,896 		JBrowse link
G MSH2 mutS homolog 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 2:47,403,067...47,709,830
Ensembl chr 2:47,403,067...47,663,146 		JBrowse link
G NSD2 nuclear receptor binding SET domain protein 2 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:23241889) Ensembl
MGI		 PMID:23241889 GO_REF:0000107 NCBI chr 4:1,871,393...1,982,192
Ensembl chr 4:1,871,393...1,982,207 		JBrowse link
G PMS2 PMS1 homolog 2, mismatch repair system component involved_in IEA Ensembl GO_REF:0000107 NCBI chr 7:5,970,925...6,009,106
Ensembl chr 7:5,970,925...6,009,130 		JBrowse link
G TGFB1 transforming growth factor beta 1 acts_upstream_of_or_within IDA (PMID:14988498) MGI PMID:14988498 NCBI chr19:41,330,323...41,353,922
Ensembl chr19:41,301,587...41,353,922 		JBrowse link
G TNFSF13 TNF superfamily member 13 acts_upstream_of_or_within
involved_in		 IDA
IBA		 (PMID:14988498) MGI
GO_Central		 PMID:14988498 GO_REF:0000033 NCBI chr17:7,558,282...7,561,601
Ensembl chr17:7,558,292...7,561,608 		JBrowse link
positive regulation of isotype switching to IgE isotypes term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G CLCF1 cardiotrophin like cytokine factor 1 involved_in IEA
ISS		 Ensembl
BHF-UCL		 GO_REF:0000024 GO_REF:0000107 NCBI chr11:67,364,168...67,374,177
Ensembl chr11:67,364,168...67,374,177 		JBrowse link
G IL4 interleukin 4 involved_in
acts_upstream_of_or_within		 ISS
ISO		 (PMID:14988498) UniProt
MGI		 PMID:14988498 GO_REF:0000024 NCBI chr 5:132,673,989...132,682,678
Ensembl chr 5:132,673,986...132,682,678 		JBrowse link
G STAT6 signal transducer and activator of transcription 6 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:10490661) Ensembl
MGI		 PMID:10490661 GO_REF:0000107 NCBI chr12:57,095,408...57,111,362
Ensembl chr12:57,095,408...57,132,139 		JBrowse link
positive regulation of isotype switching to IgG isotypes term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ATAD5 ATPase family AAA domain containing 5 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:25404367) Ensembl
MGI		 PMID:25404367 GO_REF:0000107 NCBI chr17:30,831,966...30,895,869
Ensembl chr17:30,831,966...30,895,869 		JBrowse link
G CD28 CD28 molecule involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:7688139) Ensembl
MGI		 PMID:7688139 GO_REF:0000107 NCBI chr 2:203,706,482...203,738,912
Ensembl chr 2:203,706,517...203,739,756 		JBrowse link
G CD40 CD40 molecule involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:12882831) Ensembl
MGI		 PMID:12882831 GO_REF:0000107 NCBI chr20:46,118,314...46,129,858
Ensembl chr20:46,118,271...46,129,863 		JBrowse link
G IFNG interferon gamma acts_upstream_of_or_within ISO (PMID:12882831) MGI PMID:12882831 NCBI chr12:68,154,768...68,159,740
Ensembl chr12:68,154,768...68,159,740 		JBrowse link
G IL2 interleukin 2 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:1830926) Ensembl
MGI		 PMID:1830926 GO_REF:0000107 NCBI chr 4:122,451,470...122,456,725
Ensembl chr 4:122,451,470...122,456,725 		JBrowse link
G IL4 interleukin 4 involved_in
acts_upstream_of_or_within		 ISS
ISO		 (PMID:12882831), (PMID:14988498) UniProt
MGI		 PMID:12882831 PMID:14988498 GO_REF:0000024 NCBI chr 5:132,673,989...132,682,678
Ensembl chr 5:132,673,986...132,682,678 		JBrowse link
G MLH1 mutL homolog 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 3:36,993,466...37,050,846
Ensembl chr 3:36,993,226...37,050,896 		JBrowse link
G MSH2 mutS homolog 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 2:47,403,067...47,709,830
Ensembl chr 2:47,403,067...47,663,146 		JBrowse link
G PAGR1 PAXIP1 associated glutamate rich protein 1 involved_in ISO (PMID:26744420) UniProt PMID:26744420 NCBI chr16:29,816,152...29,822,489
Ensembl chr16:29,816,152...29,822,489 		JBrowse link
G PAXIP1 PAX interacting protein 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 7:154,943,690...155,003,411
Ensembl chr 7:154,943,687...155,003,124 		JBrowse link
G PMS2 PMS1 homolog 2, mismatch repair system component involved_in IEA Ensembl GO_REF:0000107 NCBI chr 7:5,970,925...6,009,106
Ensembl chr 7:5,970,925...6,009,130 		JBrowse link
G PTPRC protein tyrosine phosphatase receptor type C involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:9015183) Ensembl
MGI		 PMID:9015183 GO_REF:0000107 NCBI chr 1:198,638,713...198,757,476
Ensembl chr 1:198,638,457...198,759,342 		JBrowse link
G TBX21 T-box transcription factor 21 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:12882831) Ensembl
MGI		 PMID:12882831 GO_REF:0000107 NCBI chr17:47,733,236...47,746,122
Ensembl chr17:47,733,236...47,746,122 		JBrowse link
positive regulation of macrophage tolerance induction term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G IRAK3 interleukin 1 receptor associated kinase 3 involved_in IEA
ISS		 (PMID:12150927) Ensembl
BHF-UCL		 PMID:12150927 GO_REF:0000107 NCBI chr12:66,189,214...66,254,622
Ensembl chr12:66,189,195...66,254,622 		JBrowse link
positive regulation of peripheral T cell tolerance induction term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G FOXP3 forkhead box P3 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:16532000) Ensembl
MGI		 PMID:16532000 GO_REF:0000107 NCBI chr  X:49,250,438...49,264,710
Ensembl chr  X:49,250,438...49,264,800 		JBrowse link
positive regulation of T cell anergy term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G CBLB Cbl proto-oncogene B involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:14973438) Ensembl
MGI		 PMID:14973438 GO_REF:0000107 NCBI chr 3:105,655,461...105,869,449
Ensembl chr 3:105,655,461...105,869,552 		JBrowse link
G CD3E CD3 epsilon subunit of T-cell receptor complex involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:14973438) Ensembl
MGI		 PMID:14973438 GO_REF:0000107 NCBI chr11:118,304,730...118,316,173
Ensembl chr11:118,304,730...118,316,175 		JBrowse link
G FOXP3 forkhead box P3 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:16945588) Ensembl
MGI		 PMID:16945588 GO_REF:0000107 NCBI chr  X:49,250,438...49,264,710
Ensembl chr  X:49,250,438...49,264,800 		JBrowse link
G ITCH itchy E3 ubiquitin protein ligase involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:14973438) Ensembl
MGI		 PMID:14973438 GO_REF:0000107 NCBI chr20:34,363,273...34,511,773
Ensembl chr20:34,363,235...34,511,773 		JBrowse link
G LILRB4 leukocyte immunoglobulin like receptor B4 involved_in IMP (PMID:16493035) ARUK-UCL PMID:16493035 NCBI chr19:54,662,985...54,668,718
Ensembl chr19:54,643,889...54,670,359 		JBrowse link
G NR5A2 nuclear receptor subfamily 5 group A member 2 involved_in IEA
ISS		 Ensembl
UniProt		 GO_REF:0000024 GO_REF:0000107 NCBI chr 1:200,027,710...200,177,415
Ensembl chr 1:200,027,614...200,177,420 		JBrowse link
positive regulation of T cell tolerance induction term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G FOXP3 forkhead box P3 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:16945588) Ensembl
MGI		 PMID:16945588 GO_REF:0000107 NCBI chr  X:49,250,438...49,264,710
Ensembl chr  X:49,250,438...49,264,800 		JBrowse link
G HLA-G major histocompatibility complex, class I, G involved_in IMP (PMID:20448110) BHF-UCL PMID:20448110 NCBI chr 6:29,826,474...29,831,021
Ensembl chr 6:29,826,967...29,831,125 		JBrowse link
G IDO1 indoleamine 2,3-dioxygenase 1 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:9712583) Ensembl
MGI		 PMID:9712583 GO_REF:0000107 NCBI chr 8:39,913,891...39,928,790
Ensembl chr 8:39,902,275...39,928,790 		JBrowse link
G LILRB2 leukocyte immunoglobulin like receptor B2 involved_in IMP (PMID:20008523), (PMID:20448110) BHF-UCL PMID:20008523 PMID:20448110 NCBI chr19:54,273,812...54,281,110
Ensembl chr19:54,273,812...54,281,184 		JBrowse link
G TGFBR2 transforming growth factor beta receptor 2 involved_in
acts_upstream_of_or_within		 IEA
ISO
ISS		 (PMID:16973387) Ensembl
MGI
BHF-UCL		 PMID:16973387 GO_REF:0000024 GO_REF:0000107 NCBI chr 3:30,606,356...30,694,142
Ensembl chr 3:30,606,478...30,694,249 		JBrowse link
positive regulation of tolerance induction term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G HLA-G major histocompatibility complex, class I, G involved_in IMP (PMID:22802125) UniProt PMID:22802125 NCBI chr 6:29,826,474...29,831,021
Ensembl chr 6:29,826,967...29,831,125 		JBrowse link
G LILRB2 leukocyte immunoglobulin like receptor B2 involved_in IMP (PMID:22802125) UniProt PMID:22802125 NCBI chr19:54,273,812...54,281,110
Ensembl chr19:54,273,812...54,281,184 		JBrowse link
positive regulation of tolerance induction to self antigen term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G TGFBR2 transforming growth factor beta receptor 2 involved_in
acts_upstream_of_or_within		 IEA
ISO
ISS		 (PMID:16973387) Ensembl
MGI
BHF-UCL		 PMID:16973387 GO_REF:0000024 GO_REF:0000107 NCBI chr 3:30,606,356...30,694,142
Ensembl chr 3:30,606,478...30,694,249 		JBrowse link
regulation of isotype switching term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G APLF aprataxin and PNKP like factor involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:21211721) Ensembl
MGI		 PMID:21211721 GO_REF:0000107 NCBI chr 2:68,467,585...68,580,162
Ensembl chr 2:68,467,572...68,655,862 		JBrowse link
G IL10 interleukin 10 involved_in NAS (PMID:8228801) UniProt PMID:8228801 NCBI chr 1:206,767,602...206,772,494
Ensembl chr 1:206,767,602...206,774,541 		JBrowse link
G IL4 interleukin 4 involved_in TAS (PMID:11418631) UniProt PMID:11418631 NCBI chr 5:132,673,989...132,682,678
Ensembl chr 5:132,673,986...132,682,678 		JBrowse link
G MIR181B1 microRNA 181b-1 acts_upstream_of_or_within ISO (PMID:18762567) MGI PMID:18762567 NCBI chr 1:198,858,873...198,858,982
Ensembl chr 1:198,858,873...198,858,982 		JBrowse link
G MIR181B2 microRNA 181b-2 acts_upstream_of_or_within ISO (PMID:18762567) MGI PMID:18762567 NCBI chr 9:124,693,710...124,693,798
Ensembl chr 9:124,693,710...124,693,798 		JBrowse link
G SUPT6H SPT6 homolog, histone chaperone and transcription elongation factor involved_in ISS
IEA		 UniProt
Ensembl		 GO_REF:0000024 GO_REF:0000107 NCBI chr17:28,662,205...28,702,679
Ensembl chr17:28,662,198...28,702,679 		JBrowse link
regulation of isotype switching to IgG isotypes term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G FOXP3 forkhead box P3 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:16275384) Ensembl
MGI		 PMID:16275384 GO_REF:0000107 NCBI chr  X:49,250,438...49,264,710
Ensembl chr  X:49,250,438...49,264,800 		JBrowse link
G IL27RA interleukin 27 receptor subunit alpha involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:11057672) Ensembl
MGI		 PMID:11057672 GO_REF:0000107 NCBI chr19:14,031,762...14,053,218
Ensembl chr19:14,031,762...14,053,218 		JBrowse link
G NDFIP1 Nedd4 family interacting protein 1 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:17137798) Ensembl
MGI		 PMID:17137798 GO_REF:0000107 NCBI chr 5:142,108,779...142,154,440
Ensembl chr 5:142,108,779...142,154,440 		JBrowse link
G SLC15A4 solute carrier family 15 member 4 involved_in ISS
IEA		 UniProt
Ensembl		 GO_REF:0000024 GO_REF:0000107 NCBI chr12:128,793,194...128,823,958
Ensembl chr12:128,793,194...128,823,958 		JBrowse link
regulation of T cell anergy term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G CLC Charcot-Leyden crystal galectin involved_in IMP (PMID:17502455) UniProt PMID:17502455 NCBI chr19:39,731,255...39,738,029
Ensembl chr19:39,731,255...39,738,029 		JBrowse link
G FOXP3 forkhead box P3 involved_in ISS
IEA		 UniProt
Ensembl		 GO_REF:0000024 GO_REF:0000107 NCBI chr  X:49,250,438...49,264,710
Ensembl chr  X:49,250,438...49,264,800 		JBrowse link
G HLA-B major histocompatibility complex, class I, B involved_in IMP (PMID:20008523) BHF-UCL PMID:20008523 NCBI chr 6:31,353,875...31,357,179
Ensembl chr 6:31,353,872...31,367,067 		JBrowse link
G PHLPP1 PH domain and leucine rich repeat protein phosphatase 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr18:62,715,541...62,980,433
Ensembl chr18:62,715,541...62,980,433 		JBrowse link
G RUNX1 RUNX family transcription factor 1 involved_in ISO (PMID:17377532) UniProt PMID:17377532 NCBI chr21:34,787,801...35,049,302
Ensembl chr21:34,787,801...36,004,667 		JBrowse link
regulation of T cell tolerance induction term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G IL2RA interleukin 2 receptor subunit alpha involved_in IMP (PMID:23416241) UniProt PMID:23416241 NCBI chr10:6,010,689...6,062,367
Ensembl chr10:6,010,689...6,062,370 		JBrowse link
regulation of tolerance induction term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G HMGB1 high mobility group box 1 involved_in IDA (PMID:18631454) UniProt PMID:18631454 NCBI chr13:30,456,704...30,617,597
Ensembl chr13:30,456,704...30,617,597 		JBrowse link
G MARCHF7 membrane associated ring-CH-type finger 7 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:15670816) Ensembl
MGI		 PMID:15670816 GO_REF:0000107 NCBI chr 2:159,712,506...159,771,027
Ensembl chr 2:159,712,457...159,771,027 		JBrowse link
regulation of tolerance induction dependent upon immune response term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G HAVCR2 hepatitis A virus cellular receptor 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 5:157,085,832...157,109,044
Ensembl chr 5:157,085,422...157,142,869 		JBrowse link
somatic diversification of immune receptors via somatic mutation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ADAR adenosine deaminase RNA specific involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:23209284) Ensembl
MGI		 PMID:23209284 GO_REF:0000107 NCBI chr 1:154,582,057...154,627,997
Ensembl chr 1:154,581,695...154,628,013 		JBrowse link
somatic diversification of immunoglobulins term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G AICDA activation induced cytidine deaminase involved_in IDA (PMID:18722174) UniProt PMID:18722174 NCBI chr12:8,602,170...8,612,859
Ensembl chr12:8,602,155...8,613,242 		JBrowse link
G CTNNBL1 catenin beta like 1 involved_in IMP (PMID:18722174) UniProt PMID:18722174 NCBI chr20:37,694,030...37,872,118
Ensembl chr20:37,694,030...37,872,129 		JBrowse link
G POLB DNA polymerase beta involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:24388753) Ensembl
MGI		 PMID:24388753 GO_REF:0000107 NCBI chr 8:42,338,494...42,371,808
Ensembl chr 8:42,338,454...42,371,808 		JBrowse link
somatic diversification of immunoglobulins involved in immune response term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G MAD2L2 mitotic arrest deficient 2 like 2 involved_in NAS (PMID:29656893) ComplexPortal PMID:29656893 NCBI chr 1:11,674,480...11,691,830
Ensembl chr 1:11,657,230...11,691,811 		JBrowse link
G SHLD1 shieldin complex subunit 1 involved_in NAS (PMID:29656893) ComplexPortal PMID:29656893 NCBI chr20:5,750,193...5,864,395
Ensembl chr20:5,750,393...5,864,395 		JBrowse link
G SHLD2 shieldin complex subunit 2 involved_in NAS (PMID:29656893) ComplexPortal PMID:29656893 NCBI chr10:87,094,473...87,191,465
Ensembl chr10:87,094,161...87,191,465 		JBrowse link
G SHLD3 shieldin complex subunit 3 involved_in NAS (PMID:29656893) ComplexPortal PMID:29656893 NCBI chr 5:65,625,027...65,630,928
Ensembl chr 5:65,625,027...65,630,928 		JBrowse link
somatic hypermutation of immunoglobulin genes term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G AICDA activation induced cytidine deaminase involved_in IMP (PMID:21518874) UniProt PMID:21518874 NCBI chr12:8,602,170...8,612,859
Ensembl chr12:8,602,155...8,613,242 		JBrowse link
G EXO1 exonuclease 1 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:14716311) Ensembl
MGI		 PMID:14716311 GO_REF:0000107 NCBI chr 1:241,847,986...241,889,939
Ensembl chr 1:241,847,967...241,895,148 		JBrowse link
G HMCES 5-hydroxymethylcytosine binding, ES cell specific involved_in IDA
IEA		 (PMID:35450882) UniProt
Ensembl		 PMID:35450882 GO_REF:0000107 NCBI chr 3:129,278,832...129,306,186
Ensembl chr 3:129,278,828...129,306,186 		JBrowse link
G MCM3AP minichromosome maintenance complex component 3 associated protein involved_in IDA (PMID:23652018) UniProt PMID:23652018 NCBI chr21:46,235,133...46,286,265
Ensembl chr21:46,235,133...46,286,297 		JBrowse link
G MLH1 mutL homolog 1 involved_in
acts_upstream_of_or_within		 IEA
ISO
IBA		 (PMID:10092760), (PMID:10429667) Ensembl
MGI
GO_Central		 PMID:10092760 PMID:10429667 GO_REF:0000033 GO_REF:0000107 NCBI chr 3:36,993,466...37,050,846
Ensembl chr 3:36,993,226...37,050,896 		JBrowse link
G MSH2 mutS homolog 2 involved_in
acts_upstream_of_or_within
NOT|acts_upstream_of_or_within		 IEA
ISO		 (PMID:9697842), (PMID:9697843)
(PMID:14568978)
(PMID:9607915)
(PMID:9607916)
(PMID:15494304)		 Ensembl
MGI		 PMID:9607915 PMID:9607916 PMID:9697842 PMID:9697843 PMID:14568978 More... GO_REF:0000107 NCBI chr 2:47,403,067...47,709,830
Ensembl chr 2:47,403,067...47,663,146 		JBrowse link
G MSH3 mutS homolog 3 NOT|acts_upstream_of_or_within ISO (PMID:10662804) MGI PMID:10662804 NCBI chr 5:80,654,652...80,876,815
Ensembl chr 5:80,654,652...80,876,815 		JBrowse link
G MSH6 mutS homolog 6 involved_in
acts_upstream_of_or_within		 ISS
ISO
IEA		 (PMID:16618598)
(PMID:10662804), (PMID:15238604), (PMID:17015724)		 BHF-UCL
MGI
Ensembl		 PMID:10662804 PMID:15238604 PMID:16618598 PMID:17015724 GO_REF:0000024 GO_REF:0000107 NCBI chr 2:47,783,145...47,810,101
Ensembl chr 2:47,695,530...47,810,063 		JBrowse link
G NUGGC nuclear GTPase, germinal center associated acts_upstream_of_or_within ISO (PMID:22833677) MGI PMID:22833677 NCBI chr 8:28,021,964...28,083,936
Ensembl chr 8:28,021,964...28,083,936 		JBrowse link
G PMS2 PMS1 homolog 2, mismatch repair system component involved_in
acts_upstream_of_or_within		 IEA
ISO
IBA		 (PMID:10429667) Ensembl
MGI
GO_Central		 PMID:10429667 GO_REF:0000033 GO_REF:0000107 NCBI chr 7:5,970,925...6,009,106
Ensembl chr 7:5,970,925...6,009,130 		JBrowse link
G POLB DNA polymerase beta involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:24388753) Ensembl
MGI		 PMID:24388753 GO_REF:0000107 NCBI chr 8:42,338,494...42,371,808
Ensembl chr 8:42,338,454...42,371,808 		JBrowse link
G POLL DNA polymerase lambda involved_in NAS (PMID:10982892) UniProt PMID:10982892 NCBI chr10:101,578,882...101,588,270
Ensembl chr10:101,578,882...101,588,270 		JBrowse link
G POLM DNA polymerase mu acts_upstream_of_or_within ISO (PMID:15789338) MGI PMID:15789338 NCBI chr 7:44,072,062...44,082,530
Ensembl chr 7:44,072,062...44,082,530 		JBrowse link
G POLQ DNA polymerase theta involved_in IEA
ISS		 Ensembl
UniProt		 GO_REF:0000024 GO_REF:0000107 NCBI chr 3:121,431,431...121,545,988
Ensembl chr 3:121,431,431...121,545,988 		JBrowse link
G SAMHD1 SAM and HD domain containing deoxynucleoside triphosphate triphosphohydrolase 1 involved_in IEA
ISS		 Ensembl
UniProt		 GO_REF:0000024 GO_REF:0000107 NCBI chr20:36,889,773...36,951,708
Ensembl chr20:36,890,229...36,951,893 		JBrowse link
G UNG uracil DNA glycosylase involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:17015724)
(PMID:15494304)		 Ensembl
MGI		 PMID:15494304 PMID:17015724 GO_REF:0000107 NCBI chr12:109,097,597...109,110,992
Ensembl chr12:109,097,597...109,126,725 		JBrowse link
somatic recombination of immunoglobulin gene segments term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G MLH1 mutL homolog 1 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:11828012) Ensembl
MGI		 PMID:11828012 GO_REF:0000107 NCBI chr 3:36,993,466...37,050,846
Ensembl chr 3:36,993,226...37,050,896 		JBrowse link
G MSH2 mutS homolog 2 involved_in
acts_upstream_of_or_within		 ISS
ISO
IEA		 (PMID:11828012)
(PMID:15494304)
(PMID:14568978)
(PMID:14563316), (PMID:15955838)		 BHF-UCL
MGI
Ensembl		 PMID:11828012 PMID:14563316 PMID:14568978 PMID:15494304 PMID:15955838 GO_REF:0000024 GO_REF:0000107 NCBI chr 2:47,403,067...47,709,830
Ensembl chr 2:47,403,067...47,663,146 		JBrowse link
G MSH3 mutS homolog 3 involved_in
acts_upstream_of_or_within		 IBA
ISO		 (PMID:15238604) GO_Central
MGI		 PMID:15238604 GO_REF:0000033 NCBI chr 5:80,654,652...80,876,815
Ensembl chr 5:80,654,652...80,876,815 		JBrowse link
G MSH6 mutS homolog 6 involved_in
acts_upstream_of_or_within		 IEA
ISO
ISS		 (PMID:15238604) Ensembl
MGI
BHF-UCL		 PMID:15238604 GO_REF:0000024 GO_REF:0000107 NCBI chr 2:47,783,145...47,810,101
Ensembl chr 2:47,695,530...47,810,063 		JBrowse link
G PMS2 PMS1 homolog 2, mismatch repair system component involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:11828012) Ensembl
MGI		 PMID:11828012 GO_REF:0000107 NCBI chr 7:5,970,925...6,009,106
Ensembl chr 7:5,970,925...6,009,130 		JBrowse link
G UNG uracil DNA glycosylase involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:15494304) Ensembl
MGI		 PMID:15494304 GO_REF:0000107 NCBI chr12:109,097,597...109,110,992
Ensembl chr12:109,097,597...109,126,725 		JBrowse link
somatic recombination of immunoglobulin genes involved in immune response term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G MLH1 mutL homolog 1 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:12743174) Ensembl
MGI		 PMID:12743174 GO_REF:0000107 NCBI chr 3:36,993,466...37,050,846
Ensembl chr 3:36,993,226...37,050,896 		JBrowse link
G MSH2 mutS homolog 2 involved_in
acts_upstream_of_or_within		 IEA
ISO
IBA		 (PMID:12743174) Ensembl
MGI
GO_Central		 PMID:12743174 GO_REF:0000033 GO_REF:0000107 NCBI chr 2:47,403,067...47,709,830
Ensembl chr 2:47,403,067...47,663,146 		JBrowse link
spleen development term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ABL1 ABL proto-oncogene 1, non-receptor tyrosine kinase involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:2065352) Ensembl
MGI		 PMID:2065352 GO_REF:0000107 NCBI chr 9:130,713,043...130,887,675
Ensembl chr 9:130,713,043...130,887,675 		JBrowse link
G ADAM17 ADAM metallopeptidase domain 17 involved_in ISS (PMID:10433800) BHF-UCL PMID:10433800 NCBI chr 2:9,488,486...9,555,830
Ensembl chr 2:9,488,486...9,556,732 		JBrowse link
G AHR aryl hydrocarbon receptor involved_in ISO (PMID:7732381), (PMID:8692887) DFLAT PMID:7732381 PMID:8692887 NCBI chr 7:17,298,652...17,346,147
Ensembl chr 7:16,916,359...17,346,152 		JBrowse link
G BARX1 BARX homeobox 1 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:17855428) Ensembl
MGI		 PMID:17855428 GO_REF:0000107 NCBI chr 9:93,951,627...93,955,355
Ensembl chr 9:93,951,627...93,955,355 		JBrowse link
G BCL2 BCL2 apoptosis regulator involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:15818405) Ensembl
MGI		 PMID:15818405 GO_REF:0000107 NCBI chr18:63,123,346...63,320,090
Ensembl chr18:63,123,346...63,320,128 		JBrowse link
G BCL2L11 BCL2 like 11 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:15818405) Ensembl
MGI		 PMID:15818405 GO_REF:0000107 NCBI chr 2:111,120,914...111,168,445
Ensembl chr 2:111,119,378...111,168,444 		JBrowse link
G BCL3 BCL3 transcription coactivator involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:10586052) Ensembl
MGI		 PMID:10586052 GO_REF:0000107 NCBI chr19:44,747,705...44,760,044
Ensembl chr19:44,747,705...44,760,044 		JBrowse link
G CACNB4 calcium voltage-gated channel auxiliary subunit beta 4 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:5037658) Ensembl
MGI		 PMID:5037658 GO_REF:0000107 NCBI chr 2:151,832,771...152,099,167
Ensembl chr 2:151,832,771...152,099,167 		JBrowse link
G CDH17 cadherin 17 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 8:94,127,162...94,217,278
Ensembl chr 8:94,127,162...94,217,303 		JBrowse link
G CDKN2B cyclin dependent kinase inhibitor 2B involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:22560297) Ensembl
MGI		 PMID:22560297 GO_REF:0000107 NCBI chr 9:22,002,903...22,009,313
Ensembl chr 9:22,002,903...22,009,305 		JBrowse link
G CFC1B cryptic, EGF-CFC family member 1B acts_upstream_of_or_within ISO (PMID:10521397) MGI PMID:10521397 NCBI chr 2:130,521,222...130,528,603
Ensembl chr 2:130,521,197...130,528,604 		JBrowse link
G CITED2 Cbp/p300 interacting transactivator with Glu/Asp rich carboxy-terminal domain 2 involved_in ISS
IEA		 BHF-UCL
Ensembl		 GO_REF:0000024 GO_REF:0000107 NCBI chr 6:139,371,807...139,374,648
Ensembl chr 6:139,371,807...139,374,648 		JBrowse link
G COA5 cytochrome c oxidase assembly factor 5 acts_upstream_of_or_within
involved_in		 ISO
IEA		 (PMID:36301669) MGI
Ensembl		 PMID:36301669 GO_REF:0000107 NCBI chr 2:98,599,314...98,608,512
Ensembl chr 2:98,599,314...98,608,515 		JBrowse link
G CTC1 CST telomere replication complex component 1 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:22531781) Ensembl
MGI		 PMID:22531781 GO_REF:0000107 NCBI chr17:8,224,815...8,248,056
Ensembl chr17:8,224,815...8,248,058 		JBrowse link
G DICER1 dicer 1, ribonuclease III acts_upstream_of_or_within ISO (PMID:21307095) MGI PMID:21307095 NCBI chr14:95,086,228...95,158,010
Ensembl chr14:95,086,228...95,158,010 		JBrowse link
G EPB42 erythrocyte membrane protein band 4.2 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:10359562) Ensembl
MGI		 PMID:10359562 GO_REF:0000107 NCBI chr15:43,197,227...43,225,737
Ensembl chr15:43,197,227...43,221,018 		JBrowse link
G FADD Fas associated via death domain involved_in IEA
ISS		 Ensembl
UniProt		 GO_REF:0000024 GO_REF:0000107 NCBI chr11:70,203,296...70,207,390
Ensembl chr11:70,203,296...70,207,390 		JBrowse link
G FAM210B family with sequence similarity 210 member B acts_upstream_of_or_within
involved_in		 ISO
IEA		 (PMID:39000360) MGI
Ensembl		 PMID:39000360 GO_REF:0000107 NCBI chr20:56,358,974...56,368,663
Ensembl chr20:56,358,974...56,368,663 		JBrowse link
G FAS Fas cell surface death receptor acts_upstream_of_or_within ISO (PMID:18199416) MGI PMID:18199416 NCBI chr10:88,964,050...89,017,059
Ensembl chr10:88,953,813...89,029,605 		JBrowse link
G FGF10 fibroblast growth factor 10 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:15329346) Ensembl
MGI		 PMID:15329346 GO_REF:0000107 NCBI chr 5:44,300,247...44,389,420
Ensembl chr 5:44,300,247...44,389,706 		JBrowse link
G FLT3 fms related receptor tyrosine kinase 3 acts_upstream_of_or_within ISO (PMID:22674806) MGI PMID:22674806 NCBI chr13:28,003,274...28,100,576
Ensembl chr13:28,003,274...28,100,592 		JBrowse link
G FLVCR1 FLVCR choline and heme transporter 1 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:18258918) Ensembl
MGI		 PMID:18258918 GO_REF:0000107 NCBI chr 1:212,858,275...212,899,363
Ensembl chr 1:212,858,275...212,899,363 		JBrowse link
G HOXB4 homeobox B4 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:14962901) Ensembl
MGI		 PMID:14962901 GO_REF:0000107 NCBI chr17:48,575,507...48,578,350
Ensembl chr17:48,575,507...48,578,350 		JBrowse link
G JARID2 jumonji and AT-rich interaction domain containing 2 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:9376320) Ensembl
MGI		 PMID:9376320 GO_REF:0000107 NCBI chr 6:15,246,069...15,522,042
Ensembl chr 6:15,246,069...15,522,042 		JBrowse link
G KMT2A lysine methyltransferase 2A involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:22674806) Ensembl
MGI		 PMID:22674806 GO_REF:0000107 NCBI chr11:118,436,492...118,526,832
Ensembl chr11:118,436,456...118,526,832 		JBrowse link
G LIPA lipase A, lysosomal acid type involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:19179613) Ensembl
MGI		 PMID:19179613 GO_REF:0000107 NCBI chr10:89,213,572...89,251,775
Ensembl chr10:89,213,569...89,414,557 		JBrowse link
G MYB MYB proto-oncogene, transcription factor acts_upstream_of_or_within ISO (PMID:19360001) MGI PMID:19360001 NCBI chr 6:135,181,308...135,219,172
Ensembl chr 6:135,181,308...135,219,173 		JBrowse link
G NFKB2 nuclear factor kappa B subunit 2 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:10586052) Ensembl
MGI		 PMID:10586052 GO_REF:0000107 NCBI chr10:102,394,110...102,402,529
Ensembl chr10:102,394,110...102,402,524 		JBrowse link
G NFKBIZ NFKB inhibitor zeta involved_in IEA Ensembl GO_REF:0000107 NCBI chr 3:101,827,990...101,861,022
Ensembl chr 3:101,827,991...101,861,022 		JBrowse link
G NKX2-3 NK2 homeobox 3 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:10207146), (PMID:10790368)
(PMID:10926756)		 Ensembl
MGI		 PMID:10207146 PMID:10790368 PMID:10926756 GO_REF:0000107 NCBI chr10:99,532,942...99,536,524
Ensembl chr10:99,532,942...99,536,524 		JBrowse link
G NKX2-5 NK2 homeobox 5 involved_in
acts_upstream_of_or_within		 IMP
ISO
IEA
ISS		 (PMID:22560297)
(PMID:8900537)		 UniProt
MGI
Ensembl
BHF-UCL		 PMID:8900537 PMID:22560297 GO_REF:0000107 NCBI chr 5:173,232,109...173,235,206
Ensembl chr 5:173,232,109...173,235,311 		JBrowse link
G NKX3-2 NK3 homeobox 2 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:10449756), (PMID:15329346)
(PMID:19208343)
(PMID:10572046)		 Ensembl
MGI		 PMID:10449756 PMID:10572046 PMID:15329346 PMID:19208343 GO_REF:0000107 NCBI chr 4:13,540,830...13,547,744
Ensembl chr 4:13,540,830...13,544,508 		JBrowse link
G NR1H3 nuclear receptor subfamily 1 group H member 3 ISO RGD PMID:17341476 RGD:401827282 NCBI chr11:47,248,300...47,269,033
Ensembl chr11:47,248,300...47,269,033 		JBrowse link
G ONECUT1 one cut homeobox 1 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:12874218) Ensembl
MGI		 PMID:12874218 GO_REF:0000107 NCBI chr15:52,755,053...52,790,336
Ensembl chr15:52,755,053...52,791,078 		JBrowse link
G PBX1 PBX homeobox 1 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:15944191)
(PMID:22560297)		 Ensembl
MGI		 PMID:15944191 PMID:22560297 GO_REF:0000107 NCBI chr 1:164,559,184...164,886,047
Ensembl chr 1:164,555,584...164,899,296 		JBrowse link
G PCID2 PCI domain containing 2 involved_in ISS
IEA		 UniProt
Ensembl		 GO_REF:0000024 GO_REF:0000107 NCBI chr13:113,165,002...113,208,669
Ensembl chr13:113,177,536...113,208,715 		JBrowse link
G PITX2 paired like homeodomain 2 involved_in ISS BHF-UCL GO_REF:0000024 NCBI chr 4:110,617,423...110,642,123
Ensembl chr 4:110,617,423...110,642,123 		JBrowse link
G PKN1 protein kinase N1 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:23223530) Ensembl
MGI		 PMID:23223530 GO_REF:0000107 NCBI chr19:14,433,306...14,471,859
Ensembl chr19:14,433,053...14,471,867 		JBrowse link
G POLB DNA polymerase beta involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:24388753) Ensembl
MGI		 PMID:24388753 GO_REF:0000107 NCBI chr 8:42,338,494...42,371,808
Ensembl chr 8:42,338,454...42,371,808 		JBrowse link
G PPP2R3C protein phosphatase 2 regulatory subunit B''gamma involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:16129705) Ensembl
MGI		 PMID:16129705 GO_REF:0000107 NCBI chr14:35,085,472...35,122,298
Ensembl chr14:35,085,467...35,122,517 		JBrowse link
G PRKDC protein kinase, DNA-activated, catalytic subunit ISO RGD PMID:22981234 RGD:8696027 NCBI chr 8:47,773,111...47,960,136
Ensembl chr 8:47,773,111...47,960,178 		JBrowse link
G PSMB9 proteasome 20S subunit beta 9 ISO RGD PMID:24707720 RGD:9854625 NCBI chr 6:32,854,192...32,859,851
Ensembl chr 6:32,844,136...32,860,734 		JBrowse link
G RBM15 RNA binding motif protein 15 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:18981216) Ensembl
MGI		 PMID:18981216 GO_REF:0000107 NCBI chr 1:110,339,377...110,346,677
Ensembl chr 1:110,338,506...110,346,681 		JBrowse link
G RC3H1 ring finger and CCCH-type domains 1 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:23583643) Ensembl
MGI		 PMID:23583643 GO_REF:0000107 NCBI chr 1:173,931,084...174,022,357
Ensembl chr 1:173,931,084...174,022,357 		JBrowse link
G RC3H2 ring finger and CCCH-type domains 2 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:23583643) Ensembl
MGI		 PMID:23583643 GO_REF:0000107 NCBI chr 9:122,844,556...122,905,359
Ensembl chr 9:122,844,556...122,905,359 		JBrowse link
G RCBTB2 RCC1 and BTB domain containing protein 2 acts_upstream_of_or_within
involved_in		 ISO
IEA		 (PMID:26291700) MGI
Ensembl		 PMID:26291700 GO_REF:0000107 NCBI chr13:48,488,963...48,535,895
Ensembl chr13:48,488,963...48,533,256 		JBrowse link
G RIPK3 receptor interacting serine/threonine kinase 3 involved_in ISS
IEA		 UniProt
Ensembl		 GO_REF:0000024 GO_REF:0000107 NCBI chr14:24,336,025...24,339,991
Ensembl chr14:24,336,025...24,340,022 		JBrowse link
G SAMD9L sterile alpha motif domain containing 9 like acts_upstream_of_or_within ISO (PMID:24029230) MGI PMID:24029230 NCBI chr 7:93,130,056...93,148,385
Ensembl chr 7:93,130,056...93,148,385 		JBrowse link
G SCO1 synthesis of cytochrome C oxidase 1 acts_upstream_of_or_within ISO (PMID:36301669) MGI PMID:36301669 NCBI chr17:10,672,474...10,697,533
Ensembl chr17:10,672,474...10,698,375 		JBrowse link
G SLC40A1 solute carrier family 40 member 1 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:15342464) Ensembl
MGI		 PMID:15342464 GO_REF:0000107 NCBI chr 2:189,560,590...189,580,786
Ensembl chr 2:189,560,590...189,583,758 		JBrowse link
G TCF21 transcription factor 21 involved_in ISS
IEA		 UniProt
Ensembl		 GO_REF:0000024 GO_REF:0000107 NCBI chr 6:133,889,113...133,895,537
Ensembl chr 6:133,889,113...133,895,553 		JBrowse link
G TET2 tet methylcytosine dioxygenase 2 acts_upstream_of_or_within ISO (PMID:21803851) MGI PMID:21803851 NCBI chr 4:105,145,875...105,279,803
Ensembl chr 4:105,145,875...105,279,816 		JBrowse link
G TLX1 T cell leukemia homeobox 1 acts_upstream_of_or_within ISO (PMID:11356032)
(PMID:15944191)		 MGI PMID:11356032 PMID:15944191 NCBI chr10:101,131,300...101,137,789
Ensembl chr10:101,131,300...101,137,789 		JBrowse link
G TRAF3IP2 TRAF3 interacting protein 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 6:111,555,381...111,605,878
Ensembl chr 6:111,555,381...111,606,906 		JBrowse link
spleen trabecula formation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G SLC40A1 solute carrier family 40 member 1 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:15342464) Ensembl
MGI		 PMID:15342464 GO_REF:0000107 NCBI chr 2:189,560,590...189,580,786
Ensembl chr 2:189,560,590...189,583,758 		JBrowse link
T cell anergy term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G CBLB Cbl proto-oncogene B involved_in
acts_upstream_of		 IEA
ISO		 (PMID:14973438) Ensembl
MGI		 PMID:14973438 GO_REF:0000107 NCBI chr 3:105,655,461...105,869,449
Ensembl chr 3:105,655,461...105,869,552 		JBrowse link
G CD3E CD3 epsilon subunit of T-cell receptor complex involved_in
acts_upstream_of		 IEA
ISO		 (PMID:14973438) Ensembl
MGI		 PMID:14973438 GO_REF:0000107 NCBI chr11:118,304,730...118,316,173
Ensembl chr11:118,304,730...118,316,175 		JBrowse link
G FOXP3 forkhead box P3 involved_in
acts_upstream_of		 IEA
ISO		 (PMID:16945588) Ensembl
MGI		 PMID:16945588 GO_REF:0000107 NCBI chr  X:49,250,438...49,264,710
Ensembl chr  X:49,250,438...49,264,800 		JBrowse link
G ITCH itchy E3 ubiquitin protein ligase involved_in
acts_upstream_of		 IEA
ISO		 (PMID:14973438) Ensembl
MGI		 PMID:14973438 GO_REF:0000107 NCBI chr20:34,363,273...34,511,773
Ensembl chr20:34,363,235...34,511,773 		JBrowse link
T cell receptor V(D)J recombination term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G BCL11B BCL11 transcription factor B involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:12717433) Ensembl
MGI		 PMID:12717433 GO_REF:0000107 NCBI chr14:99,169,287...99,272,197
Ensembl chr14:99,169,287...99,272,197 		JBrowse link
G LEF1 lymphoid enhancer binding factor 1 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:9462507) Ensembl
MGI		 PMID:9462507 GO_REF:0000107 NCBI chr 4:108,047,548...108,168,932
Ensembl chr 4:108,047,545...108,168,956 		JBrowse link
G LIG4 DNA ligase 4 involved_in
acts_upstream_of_or_within		 ISS
ISO
IEA		 (PMID:10911993) UniProt
MGI
Ensembl		 PMID:10911993 GO_REF:0000024 GO_REF:0000107 NCBI chr13:108,207,442...108,218,349
Ensembl chr13:108,207,439...108,218,368 		JBrowse link
G PRKDC protein kinase, DNA-activated, catalytic subunit involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:9768755) Ensembl
MGI		 PMID:9768755 GO_REF:0000107 NCBI chr 8:47,773,111...47,960,136
Ensembl chr 8:47,773,111...47,960,178 		JBrowse link
G TCF7 transcription factor 7 acts_upstream_of_or_within ISO (PMID:9462507) MGI PMID:9462507 NCBI chr 5:134,108,218...134,148,210
Ensembl chr 5:134,114,681...134,151,865 		JBrowse link
T cell tolerance induction term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G FOXP3 forkhead box P3 involved_in
acts_upstream_of		 IEA
ISO		 (PMID:16945588) Ensembl
MGI		 PMID:16945588 GO_REF:0000107 NCBI chr  X:49,250,438...49,264,710
Ensembl chr  X:49,250,438...49,264,800 		JBrowse link
G ICOS inducible T cell costimulator involved_in ISO
IBA		 RGD
GO_Central		 PMID:16220623 GO_REF:0000033 RGD:1624271 NCBI chr 2:203,936,763...203,961,577
Ensembl chr 2:203,936,763...203,961,577 		JBrowse link
thymus development term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ABL1 ABL proto-oncogene 1, non-receptor tyrosine kinase involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:2065352) Ensembl
MGI		 PMID:2065352 GO_REF:0000107 NCBI chr 9:130,713,043...130,887,675
Ensembl chr 9:130,713,043...130,887,675 		JBrowse link
G ADRM1 ADRM1 26S proteasome ubiquitin receptor involved_in ISO (PMID:21048919) BHF-UCL PMID:21048919 NCBI chr20:62,302,896...62,308,862
Ensembl chr20:62,302,093...62,308,862 		JBrowse link
G APC APC regulator of WNT signaling pathway acts_upstream_of_or_within ISO (PMID:16025118)
(PMID:17002498)		 MGI PMID:16025118 PMID:17002498 NCBI chr 5:112,707,498...112,846,239
Ensembl chr 5:112,707,518...112,846,239 		JBrowse link
G ASXL1 ASXL transcriptional regulator 1 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:19861679) Ensembl
MGI		 PMID:19861679 GO_REF:0000107 NCBI chr20:32,358,331...32,439,319
Ensembl chr20:32,358,330...32,439,319 		JBrowse link
G ATM ATM serine/threonine kinase involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:8843194) Ensembl
MGI		 PMID:8843194 GO_REF:0000107 NCBI chr11:108,223,067...108,369,102
Ensembl chr11:108,222,804...108,369,102 		JBrowse link
G BCL11B BCL11 transcription factor B involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:12717433) Ensembl
MGI		 PMID:12717433 GO_REF:0000107 NCBI chr14:99,169,287...99,272,197
Ensembl chr14:99,169,287...99,272,197 		JBrowse link
G BCL2 BCL2 apoptosis regulator involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:15818405)
(PMID:9241272)		 Ensembl
MGI		 PMID:9241272 PMID:15818405 GO_REF:0000107 NCBI chr18:63,123,346...63,320,090
Ensembl chr18:63,123,346...63,320,128 		JBrowse link
G BCL2L11 BCL2 like 11 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:15818405) Ensembl
MGI		 PMID:15818405 GO_REF:0000107 NCBI chr 2:111,120,914...111,168,445
Ensembl chr 2:111,119,378...111,168,444 		JBrowse link
G BRAF B-Raf proto-oncogene, serine/threonine kinase involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:18952847) Ensembl
MGI		 PMID:18952847 GO_REF:0000107 NCBI chr 7:140,713,328...140,924,929
Ensembl chr 7:140,719,327...140,924,929 		JBrowse link
G CACNB4 calcium voltage-gated channel auxiliary subunit beta 4 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:5037658) Ensembl
MGI		 PMID:5037658 GO_REF:0000107 NCBI chr 2:151,832,771...152,099,167
Ensembl chr 2:151,832,771...152,099,167 		JBrowse link
G CARMIL2 capping protein regulator and myosin 1 linker 2 acts_upstream_of_or_within ISO (PMID:23793062) MGI PMID:23793062 NCBI chr16:67,645,144...67,657,569
Ensembl chr16:67,644,988...67,657,569 		JBrowse link
G CCNB2 cyclin B2 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:9539739) Ensembl
MGI		 PMID:9539739 GO_REF:0000107 NCBI chr15:59,105,146...59,125,045
Ensembl chr15:59,105,126...59,125,045 		JBrowse link
G CHASERR CHD2 adjacent suppressive regulatory RNA involved_in ISO (PMID:27783602) MGI PMID:27783602 NCBI chr15:92,882,843...92,898,747
Ensembl chr15:92,819,305...92,899,701 		JBrowse link
G CITED2 Cbp/p300 interacting transactivator with Glu/Asp rich carboxy-terminal domain 2 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:20549734) Ensembl
MGI		 PMID:20549734 GO_REF:0000107 NCBI chr 6:139,371,807...139,374,648
Ensembl chr 6:139,371,807...139,374,648 		JBrowse link
G COA5 cytochrome c oxidase assembly factor 5 acts_upstream_of_or_within
involved_in		 ISO
IEA		 (PMID:36301669) MGI
Ensembl		 PMID:36301669 GO_REF:0000107 NCBI chr 2:98,599,314...98,608,512
Ensembl chr 2:98,599,314...98,608,515 		JBrowse link
G CRKL CRK like proto-oncogene, adaptor protein involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:16399080) Ensembl
MGI		 PMID:16399080 GO_REF:0000107 NCBI chr22:20,917,407...20,953,747
Ensembl chr22:20,917,407...20,953,747 		JBrowse link
G CTC1 CST telomere replication complex component 1 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:22531781) Ensembl
MGI		 PMID:22531781 GO_REF:0000107 NCBI chr17:8,224,815...8,248,056
Ensembl chr17:8,224,815...8,248,058 		JBrowse link
G CTNNB1 catenin beta 1 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:16025118) Ensembl
MGI		 PMID:16025118 GO_REF:0000107 NCBI chr 3:41,199,505...41,240,443
Ensembl chr 3:41,194,741...41,260,096 		JBrowse link
G EPHB3 EPH receptor B3 involved_in ISS
IEA		 UniProt
Ensembl		 GO_REF:0000024 GO_REF:0000107 NCBI chr 3:184,561,785...184,582,408
Ensembl chr 3:184,561,785...184,582,408 		JBrowse link
G FADD Fas associated via death domain involved_in IEA
ISS		 Ensembl
UniProt		 GO_REF:0000024 GO_REF:0000107 NCBI chr11:70,203,296...70,207,390
Ensembl chr11:70,203,296...70,207,390 		JBrowse link
G FGF10 fibroblast growth factor 10 involved_in IDA (PMID:17969154) UniProt PMID:17969154 NCBI chr 5:44,300,247...44,389,420
Ensembl chr 5:44,300,247...44,389,706 		JBrowse link
G FGF3 fibroblast growth factor 3 acts_upstream_of_or_within ISO (PMID:17000704) MGI PMID:17000704 NCBI chr11:69,809,968...69,819,416
Ensembl chr11:69,809,968...69,819,416 		JBrowse link
G FOXE1 forkhead box E1 involved_in IEP (PMID:15494458) UniProt PMID:15494458 NCBI chr 9:97,853,226...97,856,717
Ensembl chr 9:97,853,226...97,856,717 		JBrowse link
G FOXI3 forkhead box I3 involved_in ISS UniProt GO_REF:0000024 NCBI chr 2:88,446,787...88,452,693
Ensembl chr 2:88,446,787...88,452,693 		JBrowse link
G FOXN1 forkhead box N1 acts_upstream_of_or_within
involved_in		 ISO
IEA		 (PMID:22072979) RGD
MGI
Ensembl		 PMID:8790387 PMID:22072979 GO_REF:0000107 RGD:1300512 NCBI chr17:28,506,348...28,538,900
Ensembl chr17:28,506,243...28,538,900 		JBrowse link
G GATA3 GATA binding protein 3 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:17082577) Ensembl
MGI		 PMID:17082577 GO_REF:0000107 NCBI chr10:8,045,333...8,075,198
Ensembl chr10:8,045,378...8,075,198 		JBrowse link
G HAND2 heart and neural crest derivatives expressed 2 involved_in ISS
IEA		 BHF-UCL
Ensembl		 GO_REF:0000024 GO_REF:0000107 NCBI chr 4:173,526,091...173,530,229
Ensembl chr 4:173,524,969...173,530,229 		JBrowse link
G HES1 hes family bHLH transcription factor 1 involved_in IEA
ISS		 Ensembl
BHF-UCL		 GO_REF:0000024 GO_REF:0000107 NCBI chr 3:194,136,148...194,138,732
Ensembl chr 3:194,136,148...194,138,732 		JBrowse link
G HNRNPK heterogeneous nuclear ribonucleoprotein K ISO RGD PMID:16488668 RGD:10002779 NCBI chr 9:83,968,083...83,980,615
Ensembl chr 9:83,968,083...83,980,631 		JBrowse link
G HOXA3 homeobox A3 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:7635047)
(PMID:11476574)
(PMID:9520319)		 Ensembl
MGI		 PMID:7635047 PMID:9520319 PMID:11476574 GO_REF:0000107 NCBI chr 7:27,107,010...27,152,583
Ensembl chr 7:27,106,184...27,152,583 		JBrowse link
G IKZF1 IKAROS family zinc finger 1 acts_upstream_of_or_within ISO (PMID:7923373) MGI PMID:7923373 NCBI chr 7:50,303,455...50,405,101
Ensembl chr 7:50,304,068...50,405,101 		JBrowse link
G JARID2 jumonji and AT-rich interaction domain containing 2 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:9376320) Ensembl
MGI		 PMID:9376320 GO_REF:0000107 NCBI chr 6:15,246,069...15,522,042
Ensembl chr 6:15,246,069...15,522,042 		JBrowse link
G LMO4 LIM domain only 4 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:20549734) Ensembl
MGI		 PMID:20549734 GO_REF:0000107 NCBI chr 1:87,328,880...87,348,923
Ensembl chr 1:87,328,880...87,348,923 		JBrowse link
G MAD1L1 mitotic arrest deficient 1 like 1 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:11313860) Ensembl
MGI		 PMID:11313860 GO_REF:0000107 NCBI chr 7:1,815,795...2,232,945
Ensembl chr 7:1,815,793...2,233,243 		JBrowse link
G MAFB MAF bZIP transcription factor B involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:19164599) Ensembl
MGI		 PMID:19164599 GO_REF:0000107 NCBI chr20:40,685,848...40,689,236
Ensembl chr20:40,685,848...40,689,236 		JBrowse link
G MAP2K1 mitogen-activated protein kinase kinase 1 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:18952847) Ensembl
MGI		 PMID:18952847 GO_REF:0000107 NCBI chr15:66,386,912...66,491,544
Ensembl chr15:66,386,837...66,491,656 		JBrowse link
G MAP2K2 mitogen-activated protein kinase kinase 2 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:18952847) Ensembl
MGI		 PMID:18952847 GO_REF:0000107 NCBI chr19:4,090,321...4,124,122
Ensembl chr19:4,090,321...4,124,122 		JBrowse link
G MAPK1 mitogen-activated protein kinase 1 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:18952847) Ensembl
MGI		 PMID:18952847 GO_REF:0000107 NCBI chr22:21,759,657...21,867,680
Ensembl chr22:21,759,657...21,867,680 		JBrowse link
G MAPK3 mitogen-activated protein kinase 3 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:18952847) Ensembl
MGI		 PMID:18952847 GO_REF:0000107 NCBI chr16:30,114,105...30,123,220
Ensembl chr16:30,114,105...30,123,506 		JBrowse link
G MYB MYB proto-oncogene, transcription factor acts_upstream_of_or_within ISO (PMID:17927961) MGI PMID:17927961 NCBI chr 6:135,181,308...135,219,172
Ensembl chr 6:135,181,308...135,219,173 		JBrowse link
G NFATC3 nuclear factor of activated T cells 3 acts_upstream_of_or_within ISO (PMID:9768749) MGI PMID:9768749 NCBI chr16:68,085,370...68,229,259
Ensembl chr16:68,084,751...68,229,259 		JBrowse link
G NR1H3 nuclear receptor subfamily 1 group H member 3 ISO RGD PMID:17341476 RGD:401827282 NCBI chr11:47,248,300...47,269,033
Ensembl chr11:47,248,300...47,269,033 		JBrowse link
G PAX1 paired box 1 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:11476574) Ensembl
MGI		 PMID:11476574 GO_REF:0000107 NCBI chr20:21,705,664...21,718,481
Ensembl chr20:21,705,659...21,718,481 		JBrowse link
G PBX1 PBX homeobox 1 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:15581866) Ensembl
MGI		 PMID:15581866 GO_REF:0000107 NCBI chr 1:164,559,184...164,886,047
Ensembl chr 1:164,555,584...164,899,296 		JBrowse link
G PRDX2 peroxiredoxin 2 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:15259009) Ensembl
MGI		 PMID:15259009 GO_REF:0000107 NCBI chr19:12,796,823...12,801,800
Ensembl chr19:12,796,820...12,801,800 		JBrowse link
G PRKDC protein kinase, DNA-activated, catalytic subunit ISO RGD PMID:22981234 RGD:8696027 NCBI chr 8:47,773,111...47,960,136
Ensembl chr 8:47,773,111...47,960,178 		JBrowse link
G PSEN1 presenilin 1 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:17698590) Ensembl
MGI		 PMID:17698590 GO_REF:0000107 NCBI chr14:73,136,417...73,223,691
Ensembl chr14:73,136,418...73,223,691 		JBrowse link
G PSEN2 presenilin 2 acts_upstream_of_or_within ISO (PMID:17698590) MGI PMID:17698590 NCBI chr 1:226,870,616...226,903,668
Ensembl chr 1:226,870,184...226,927,726 		JBrowse link
G PSMB9 proteasome 20S subunit beta 9 ISO RGD PMID:18457575 RGD:9850287 NCBI chr 6:32,854,192...32,859,851
Ensembl chr 6:32,844,136...32,860,734 		JBrowse link
G RAF1 Raf-1 proto-oncogene, serine/threonine kinase involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:18952847) Ensembl
MGI		 PMID:18952847 GO_REF:0000107 NCBI chr 3:12,583,601...12,664,117
Ensembl chr 3:12,582,101...12,664,201 		JBrowse link
G RAG1 recombination activating 1 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:18684012) Ensembl
MGI		 PMID:18684012 GO_REF:0000107 NCBI chr11:36,510,353...36,579,762
Ensembl chr11:36,510,372...36,593,156 		JBrowse link
G RIPK3 receptor interacting serine/threonine kinase 3 involved_in IEA
ISS		 Ensembl
UniProt		 GO_REF:0000024 GO_REF:0000107 NCBI chr14:24,336,025...24,339,991
Ensembl chr14:24,336,025...24,340,022 		JBrowse link
G SCO1 synthesis of cytochrome C oxidase 1 acts_upstream_of_or_within ISO (PMID:36301669) MGI PMID:36301669 NCBI chr17:10,672,474...10,697,533
Ensembl chr17:10,672,474...10,698,375 		JBrowse link
G SHH sonic hedgehog signaling molecule involved_in ISS
IEA		 UniProt
Ensembl		 GO_REF:0000024 GO_REF:0000107 NCBI chr 7:155,799,980...155,812,463
Ensembl chr 7:155,799,980...155,812,463 		JBrowse link
G SIX1 SIX homeobox 1 involved_in
acts_upstream_of_or_within		 ISS
ISO
IEA		 (PMID:16530750) UniProt
MGI
Ensembl		 PMID:16530750 GO_REF:0000024 GO_REF:0000107 NCBI chr14:60,643,421...60,649,477
Ensembl chr14:60,643,421...60,658,259 		JBrowse link
G SIX4 SIX homeobox 4 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:16530750) Ensembl
MGI		 PMID:16530750 GO_REF:0000107 NCBI chr14:60,709,539...60,724,351
Ensembl chr14:60,709,539...60,724,351 		JBrowse link
G SLC46A2 solute carrier family 46 member 2 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:18684012) Ensembl
MGI		 PMID:18684012 GO_REF:0000107 NCBI chr 9:112,878,920...112,890,876
Ensembl chr 9:112,878,920...112,890,876 		JBrowse link
G SOD1 superoxide dismutase 1 involved_in NAS (PMID:16716898) UniProt PMID:16716898 NCBI chr21:31,659,693...31,668,931
Ensembl chr21:31,659,666...31,668,931 		JBrowse link
G SRF serum response factor involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:18952847) Ensembl
MGI		 PMID:18952847 GO_REF:0000107 NCBI chr 6:43,171,269...43,181,506
Ensembl chr 6:43,171,269...43,181,506 		JBrowse link
G TBX1 T-box transcription factor 1 involved_in
acts_upstream_of_or_within		 IMP
ISO		 (PMID:14585638)
(PMID:17916582)		 UniProt
MGI		 PMID:14585638 PMID:17916582 NCBI chr22:19,756,703...19,783,593
Ensembl chr22:19,756,703...19,783,593 		JBrowse link
G TGFBR1 transforming growth factor beta receptor 1 involved_in
acts_upstream_of_or_within		 IEA
ISO
ISS		 (PMID:17078885) Ensembl
MGI
BHF-UCL		 PMID:17078885 GO_REF:0000024 GO_REF:0000107 NCBI chr 9:99,103,647...99,154,192
Ensembl chr 9:99,104,038...99,154,192 		JBrowse link
G TYR tyrosinase involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:10890980) Ensembl
MGI		 PMID:10890980 GO_REF:0000107 NCBI chr11:89,177,875...89,295,759
Ensembl chr11:89,177,875...89,295,759 		JBrowse link
G ZBTB1 zinc finger and BTB domain containing 1 involved_in ISS
IEA		 UniProt
Ensembl		 GO_REF:0000024 GO_REF:0000107 NCBI chr14:64,503,716...64,533,693
Ensembl chr14:64,503,712...64,533,690 		JBrowse link
G ZMPSTE24 zinc metallopeptidase STE24 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:11923874) Ensembl
MGI		 PMID:11923874 GO_REF:0000107 NCBI chr 1:40,258,236...40,294,180
Ensembl chr 1:40,258,041...40,294,180 		JBrowse link
thymus epithelium morphogenesis term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G AIRE autoimmune regulator involved_in IEA
IBA
ISS		 Ensembl
GO_Central
UniProt		 GO_REF:0000024 GO_REF:0000033 GO_REF:0000107 NCBI chr21:44,285,876...44,298,648
Ensembl chr21:44,285,838...44,298,648 		JBrowse link
G FOXN1 forkhead box N1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr17:28,506,348...28,538,900
Ensembl chr17:28,506,243...28,538,900 		JBrowse link
tolerance induction term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G C3 complement C3 ISO RGD PMID:16555329 RGD:5129541 NCBI chr19:6,677,704...6,720,650
Ensembl chr19:6,677,704...6,730,562 		JBrowse link
G CCR4 C-C motif chemokine receptor 4 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:15809349) Ensembl
MGI		 PMID:15809349 GO_REF:0000107 NCBI chr 3:32,951,644...32,956,349
Ensembl chr 3:32,951,644...32,957,120 		JBrowse link
G FOXP3 forkhead box P3 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:15809349) Ensembl
MGI		 PMID:15809349 GO_REF:0000107 NCBI chr  X:49,250,438...49,264,710
Ensembl chr  X:49,250,438...49,264,800 		JBrowse link
G LILRB4 leukocyte immunoglobulin like receptor B4 involved_in IDA (PMID:18420485), (PMID:20935202) ARUK-UCL PMID:18420485 PMID:20935202 NCBI chr19:54,662,985...54,668,718
Ensembl chr19:54,643,889...54,670,359 		JBrowse link
tolerance induction dependent upon immune response term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G PSG9 pregnancy specific beta-1-glycoprotein 9 involved_in IDA (PMID:27389696) UniProt PMID:27389696 NCBI chr19:43,253,282...43,269,530
Ensembl chr19:43,211,791...43,269,530 		JBrowse link
tolerance induction to lipopolysaccharide term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ACOD1 aconitate decarboxylase 1 involved_in IDA (PMID:23609450) UniProt PMID:23609450 NCBI chr13:76,948,511...76,958,638
Ensembl chr13:76,948,511...76,958,638 		JBrowse link
G TNFAIP3 TNF alpha induced protein 3 involved_in IMP (PMID:21220427) BHF-UCL PMID:21220427 NCBI chr 6:137,866,349...137,883,312
Ensembl chr 6:137,867,214...137,883,314 		JBrowse link
tolerance induction to nonself antigen term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G C3AR1 complement C3a receptor 1 ISO RGD PMID:12514742 RGD:5129547 NCBI chr12:8,056,844...8,066,359
Ensembl chr12:8,056,844...8,066,359 		JBrowse link
tolerance induction to self antigen term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G FOXP3 forkhead box P3 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:15780990) Ensembl
MGI		 PMID:15780990 GO_REF:0000107 NCBI chr  X:49,250,438...49,264,710
Ensembl chr  X:49,250,438...49,264,800 		JBrowse link
G LYN LYN proto-oncogene, Src family tyrosine kinase involved_in IEA
IBA
TAS
ISS		 (PMID:15489917) Ensembl
GO_Central
UniProt		 PMID:15489917 GO_REF:0000024 GO_REF:0000033 GO_REF:0000107 NCBI chr 8:55,879,835...56,014,169
Ensembl chr 8:55,879,835...56,014,169 		JBrowse link
G TGFB1 transforming growth factor beta 1 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:17481928) Ensembl
MGI		 PMID:17481928 GO_REF:0000107 NCBI chr19:41,330,323...41,353,922
Ensembl chr19:41,301,587...41,353,922 		JBrowse link
G XKR8 XK related 8 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:29440417) Ensembl
MGI		 PMID:29440417 GO_REF:0000107 NCBI chr 1:27,959,973...27,968,093
Ensembl chr 1:27,959,588...27,968,093 		JBrowse link
V(D)J recombination term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ATM ATM serine/threonine kinase involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:23836881) Ensembl
MGI		 PMID:23836881 GO_REF:0000107 NCBI chr11:108,223,067...108,369,102
Ensembl chr11:108,222,804...108,369,102 		JBrowse link
G DCAF1 DDB1 and CUL4 associated factor 1 involved_in ISS
IEA		 UniProt
Ensembl		 GO_REF:0000024 GO_REF:0000107 NCBI chr 3:51,395,867...51,505,639
Ensembl chr 3:51,395,867...51,500,015 		JBrowse link
G DCLRE1C DNA cross-link repair 1C involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:23836881) Ensembl
MGI		 PMID:23836881 GO_REF:0000107 NCBI chr10:14,897,359...14,954,432
Ensembl chr10:14,897,359...14,954,432 		JBrowse link
G HMGB1 high mobility group box 1 involved_in IDA (PMID:9166431) UniProt PMID:9166431 NCBI chr13:30,456,704...30,617,597
Ensembl chr13:30,456,704...30,617,597 		JBrowse link
G HMGB2 high mobility group box 2 involved_in ISS UniProt GO_REF:0000024 NCBI chr 4:173,331,376...173,334,358
Ensembl chr 4:173,331,376...173,334,432 		JBrowse link
G LIG1 DNA ligase 1 NOT|involved_in IDA (PMID:9809069) UniProt PMID:9809069 NCBI chr19:48,115,445...48,170,344
Ensembl chr19:48,115,445...48,170,603 		JBrowse link
G LIG3 DNA ligase 3 NOT|involved_in IDA (PMID:9809069) UniProt PMID:9809069 NCBI chr17:34,980,512...35,010,872
Ensembl chr17:34,980,512...35,009,743 		JBrowse link
G LIG4 DNA ligase 4 involved_in
acts_upstream_of_or_within		 IEA
ISO
IDA		 (PMID:10716994)
(PMID:15194694)
(PMID:9809069)		 Ensembl
MGI
UniProt		 PMID:9809069 PMID:10716994 PMID:15194694 GO_REF:0000107 NCBI chr13:108,207,442...108,218,349
Ensembl chr13:108,207,439...108,218,368 		JBrowse link
G PRKDC protein kinase, DNA-activated, catalytic subunit involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:23836881) Ensembl
MGI		 PMID:23836881 GO_REF:0000107 NCBI chr 8:47,773,111...47,960,136
Ensembl chr 8:47,773,111...47,960,178 		JBrowse link
G RAG1 recombination activating 1 involved_in
acts_upstream_of_or_within		 IEA
ISO
IBA
ISS
IMP		 (PMID:2360047)
(PMID:14670978)		 InterPro
MGI
GO_Central
UniProt
Ensembl
CACAO		 PMID:2360047 PMID:14670978 GO_REF:0000002 GO_REF:0000024 GO_REF:0000033 GO_REF:0000104 GO_REF:0000107 NCBI chr11:36,510,353...36,579,762
Ensembl chr11:36,510,372...36,593,156 		JBrowse link
G RAG2 recombination activating 2 involved_in
acts_upstream_of_or_within		 IEA
ISO
IBA
ISS		 (PMID:2360047) Ensembl
MGI
GO_Central
UniProt		 PMID:2360047 GO_REF:0000024 GO_REF:0000033 GO_REF:0000107 NCBI chr11:36,590,996...36,598,236
Ensembl chr11:36,575,574...36,598,279 		JBrowse link
G XRCC4 X-ray repair cross complementing 4 acts_upstream_of_or_within ISO (PMID:10716994) MGI PMID:10716994 NCBI chr 5:83,077,547...83,374,473
Ensembl chr 5:83,077,498...83,353,787 		JBrowse link
G XRCC6 X-ray repair cross complementing 6 acts_upstream_of_or_within ISO (PMID:10716994) MGI PMID:10716994 NCBI chr22:41,621,295...41,664,041
Ensembl chr22:41,621,163...41,664,048 		JBrowse link
Term paths to the root
Path 1
Term Annotations click to browse term
  biological_process 20484
    immune system process 3294
      immune system development 248
        hematopoietic or lymphoid organ development + 133
        somatic diversification of immune receptors + 90
        tolerance induction + 35
Path 2
Term Annotations click to browse term
  biological_process 20484
    developmental process 7687
      anatomical structure development 7070
        multicellular organism development 5682
          system development 4956
            immune system development 248
              hematopoietic or lymphoid organ development + 133
              somatic diversification of immune receptors + 90
              tolerance induction + 35
paths to the root