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ONTOLOGY REPORT - ANNOTATIONS


Term:immune system development
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Accession:GO:0002520 term browser browse the term
Definition:The process whose specific outcome is the progression of an organismal system whose objective is to provide calibrated responses by an organism to a potential internal or invasive threat, over time, from its formation to the mature structure. A system is a regularly interacting or interdependent group of organs or tissues that work together to carry out a given biological process.


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immune system development term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G BCL2 BCL2 apoptosis regulator acts_upstream_of_or_within
involved_in
ISO
IEA
(PMID:8372353)
(PMID:7812968)
MGI
Ensembl
PMID:7812968 PMID:8372353 GO_REF:0000107 NCBI chr18:16,440,560...16,643,187
Ensembl chr18:16,441,733...16,637,895
JBrowse link
G CACNA1C calcium voltage-gated channel subunit alpha1 C involved_in IEA Ensembl GO_REF:0000107 NCBI chr11:2,107,722...2,753,970
Ensembl chr11:2,508,705...2,752,991
JBrowse link
G GATA3 GATA binding protein 3 involved_in IEA TreeGrafter GO_REF:0000118 NCBI chr 9:8,101,404...8,122,762
Ensembl chr 9:8,101,432...8,123,064
JBrowse link
G RO60 Ro60, Y RNA binding protein acts_upstream_of_or_within
involved_in
ISO
IEA
(PMID:12788971) MGI
Ensembl
PMID:12788971 GO_REF:0000107 NCBI chr25:36,339,236...36,364,066
Ensembl chr25:36,340,487...36,363,637
JBrowse link
G SMAD3 SMAD family member 3 acts_upstream_of_or_within
involved_in
ISO
IEA
(PMID:15183723) MGI
Ensembl
PMID:15183723 GO_REF:0000107 NCBI chr26:16,319,959...16,446,472
Ensembl chr26:16,320,933...16,446,527
JBrowse link
bone marrow development term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ASXL1 ASXL transcriptional regulator 1 acts_upstream_of_or_within
involved_in
ISO
IEA
(PMID:19861679) MGI
Ensembl
PMID:19861679 GO_REF:0000107 NCBI chr 2:36,735,449...36,810,447
Ensembl chr 2:36,735,830...36,812,387
JBrowse link
G CTC1 CST telomere replication complex component 1 involved_in
acts_upstream_of_or_within
IEA
ISO
(PMID:22531781) Ensembl
MGI
PMID:22531781 GO_REF:0000107 NCBI chr16:7,594,493...7,618,202
Ensembl chr16:7,594,219...7,615,754
JBrowse link
G FANCB FA complementation group B acts_upstream_of_or_within ISO (PMID:26658157) MGI PMID:26658157 NCBI chr  X:13,321,304...13,352,368
Ensembl chr  X:13,321,527...13,342,478
JBrowse link
G HOXB4 homeobox B4 involved_in
acts_upstream_of_or_within
IEA
ISO
(PMID:14962901) Ensembl
MGI
PMID:14962901 GO_REF:0000107 NCBI chr16:68,988,621...68,991,574
Ensembl chr16:68,989,862...68,991,455
JBrowse link
G LIPA lipase A, lysosomal acid type involved_in
acts_upstream_of_or_within
IEA
ISO
(PMID:20348241) Ensembl
MGI
PMID:20348241 GO_REF:0000107 NCBI chr 9:82,639,220...82,677,479
Ensembl chr 9:82,638,621...82,677,488
JBrowse link
G LRP5 LDL receptor related protein 5 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 1:6,090,048...6,224,956
Ensembl chr 1:6,089,930...6,190,383
JBrowse link
G LRRC17 leucine rich repeat containing 17 involved_in IEA Ensembl GO_REF:0000107 NCBI chr21:71,977,522...72,009,069
Ensembl chr21:71,976,823...72,011,023
JBrowse link
G PTPRC protein tyrosine phosphatase receptor type C involved_in IEA Ensembl GO_REF:0000107 NCBI chr25:30,655,014...30,777,367
Ensembl chr25:30,653,044...30,777,303
JBrowse link
G SBDS SBDS ribosome maturation factor involved_in IEA Ensembl GO_REF:0000107 NCBI chr28:2,527,395...2,535,152
Ensembl chr28:2,527,020...2,535,147
JBrowse link
G TP53 tumor protein p53 involved_in IEA Ensembl GO_REF:0000107 NCBI chr16:7,047,686...7,065,567
Ensembl chr16:7,045,146...7,066,223
JBrowse link
central tolerance induction term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G FOXJ1 forkhead box J1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr16:45,536,973...45,544,331
Ensembl chr16:45,539,510...45,544,299
JBrowse link
central tolerance induction to self antigen term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G AIRE autoimmune regulator involved_in IEA Ensembl GO_REF:0000107 NCBI chr 2:88,019,122...88,031,998
Ensembl chr 2:88,019,522...88,031,801
JBrowse link
hematopoietic or lymphoid organ development term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ASXL1 ASXL transcriptional regulator 1 acts_upstream_of_or_within
involved_in
ISO
IEA
(PMID:19861679) MGI
Ensembl
PMID:19861679 GO_REF:0000107 NCBI chr 2:36,735,449...36,810,447
Ensembl chr 2:36,735,830...36,812,387
JBrowse link
G LTBR lymphotoxin beta receptor involved_in IEA InterPro GO_REF:0000002 NCBI chr11:6,425,223...6,431,881
Ensembl chr11:6,425,324...6,433,583
JBrowse link
immunoglobulin heavy chain V-D-J recombination term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G POLB DNA polymerase beta acts_upstream_of_or_within
involved_in
ISO
IEA
(PMID:24388753) MGI
Ensembl
PMID:24388753 GO_REF:0000107 NCBI chr 8:40,332,165...40,368,065
Ensembl chr 8:40,332,208...40,372,582
JBrowse link
G YY1 YY1 transcription factor involved_in IEA Ensembl GO_REF:0000107 NCBI chr24:78,199,172...78,243,081
Ensembl chr24:78,199,039...78,237,165
JBrowse link
immunoglobulin V(D)J recombination term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G CYREN cell cycle regulator of NHEJ involved_in IEA Ensembl GO_REF:0000107 NCBI chr21:103,838,218...103,843,151
Ensembl chr21:103,838,988...103,842,620
JBrowse link
G FOXP1 forkhead box P1 acts_upstream_of_or_within ISO (PMID:16819554) MGI PMID:16819554 NCBI chr22:31,907,941...32,538,294
Ensembl chr22:31,912,460...32,154,502
JBrowse link
G LIG4 DNA ligase 4 acts_upstream_of_or_within
involved_in
ISO
IEA
(PMID:9823897) MGI
Ensembl
TreeGrafter
PMID:9823897 GO_REF:0000107 GO_REF:0000118 NCBI chr 3:86,576,200...86,587,097
Ensembl chr 3:86,577,304...86,580,039
JBrowse link
G NHEJ1 non-homologous end joining factor 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr10:104,981,313...105,071,828
Ensembl chr10:104,982,380...105,068,999
JBrowse link
G PRKDC protein kinase, DNA-activated, catalytic subunit involved_in
acts_upstream_of_or_within
IEA
ISO
(PMID:9768755) Ensembl
TreeGrafter
MGI
PMID:9768755 GO_REF:0000107 GO_REF:0000118 NCBI chr 8:43,915,226...44,119,547
Ensembl chr 8:43,914,636...44,119,541
JBrowse link
G TCF3 transcription factor 3 acts_upstream_of_or_within
involved_in
ISO
IEA
(PMID:16428437) MGI
TreeGrafter
Ensembl
PMID:16428437 GO_REF:0000107 GO_REF:0000118 NCBI chr 6:1,393,147...1,440,515
Ensembl chr 6:1,393,107...1,440,479
JBrowse link
G XRCC4 X-ray repair cross complementing 4 acts_upstream_of_or_within
involved_in
ISO
IEA
(PMID:9875844) MGI
TreeGrafter
PMID:9875844 GO_REF:0000118 NCBI chr 4:77,182,569...77,468,786
Ensembl chr 4:77,182,793...77,468,775
JBrowse link
isotype switching term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G AICDA activation induced cytidine deaminase acts_upstream_of_or_within
involved_in
ISO (PMID:17713479)
(PMID:21518874)
MGI
UniProt
PMID:17713479 PMID:21518874 NCBI chr11:8,426,920...8,438,331
Ensembl chr11:8,428,922...8,431,641
JBrowse link
G ATAD5 ATPase family AAA domain containing 5 involved_in
acts_upstream_of
IEA
ISO
(PMID:25404367) Ensembl
MGI
PMID:25404367 GO_REF:0000107 NCBI chr16:25,536,911...25,597,911
Ensembl chr16:25,538,131...25,597,695
JBrowse link
G BATF basic leucine zipper ATF-like transcription factor involved_in IEA Ensembl GO_REF:0000107 NCBI chr24:52,761,569...52,785,999
Ensembl chr24:52,761,651...52,785,978
JBrowse link
G CD40LG CD40 ligand involved_in IEA Ensembl GO_REF:0000107 NCBI chr  X:111,655,301...111,667,602
Ensembl chr  X:111,655,397...111,666,639
JBrowse link
G ERCC1 ERCC excision repair 1, endonuclease non-catalytic subunit involved_in
acts_upstream_of_or_within
IEA
ISO
(PMID:15280420) Ensembl
MGI
PMID:15280420 GO_REF:0000107 NCBI chr 6:38,857,067...38,900,177
Ensembl chr 6:38,854,803...38,872,967
JBrowse link
G EXO1 exonuclease 1 acts_upstream_of_or_within
involved_in
ISO
IEA
(PMID:14716311) MGI
Ensembl
PMID:14716311 GO_REF:0000107 NCBI chr25:78,934,337...78,976,346
Ensembl chr25:78,934,459...78,976,219
JBrowse link
G EXOSC3 exosome component 3 involved_in IEA Ensembl GO_REF:0000107 NCBI chr12:42,798,609...42,819,431
Ensembl chr12:42,799,067...42,803,471
JBrowse link
G EXOSC6 exosome component 6 involved_in ISO (PMID:21255825) UniProt PMID:21255825 NCBI chr 5:53,397,973...53,399,526 JBrowse link
G LIG4 DNA ligase 4 acts_upstream_of_or_within
involved_in
ISO
IEA
(PMID:17713479) MGI
Ensembl
PMID:17713479 GO_REF:0000107 NCBI chr 3:86,576,200...86,587,097
Ensembl chr 3:86,577,304...86,580,039
JBrowse link
G MLH1 mutL homolog 1 involved_in
acts_upstream_of_or_within
IEA
ISO
(PMID:12743174) Ensembl
MGI
PMID:12743174 GO_REF:0000107 NCBI chr15:2,364,537...2,418,379
Ensembl chr15:2,364,738...2,418,393
JBrowse link
G MSH2 mutS homolog 2 involved_in
acts_upstream_of_or_within
IEA
ISO
(PMID:12743174)
(PMID:10430621)
Ensembl
MGI
PMID:10430621 PMID:12743174 GO_REF:0000107 NCBI chr14:59,730,101...59,802,857
Ensembl chr14:59,729,789...59,802,819
JBrowse link
G MSH6 mutS homolog 6 involved_in
acts_upstream_of_or_within
IEA
ISO
(PMID:16618598)
(PMID:17015724)
Ensembl
MGI
PMID:16618598 PMID:17015724 GO_REF:0000107 NCBI chr14:59,375,602...59,400,252
Ensembl chr14:59,375,691...59,400,174
JBrowse link
G NBN nibrin involved_in IEA Ensembl GO_REF:0000107 NCBI chr 8:85,017,807...85,069,219
Ensembl chr 8:85,015,752...85,069,028
JBrowse link
G NFKBIZ NFKB inhibitor zeta involved_in IEA Ensembl GO_REF:0000107 NCBI chr22:79,044,624...79,077,736
Ensembl chr22:79,044,619...79,055,776
JBrowse link
G PCYT1A phosphate cytidylyltransferase 1A, choline involved_in ISO (PMID:19139091) UniProt PMID:19139091 NCBI chr15:90,905,691...90,944,485 JBrowse link
G RNF168 ring finger protein 168 involved_in ISO (PMID:20080757) UniProt PMID:20080757 NCBI chr15:90,702,740...90,735,279
Ensembl chr15:90,702,765...90,737,687
JBrowse link
G RNF8 ring finger protein 8 involved_in IEA Ensembl GO_REF:0000107 NCBI chr17:34,754,186...34,787,676
Ensembl chr17:34,751,945...34,787,632
JBrowse link
G SANBR SANT and BTB domain regulator of CSR involved_in IEA Ensembl GO_REF:0000107 NCBI chr14:45,865,697...45,920,403
Ensembl chr14:45,864,838...45,920,782
JBrowse link
G SWAP70 switching B cell complex subunit SWAP70 acts_upstream_of_or_within
involved_in
ISO
IEA
(PMID:9642267) MGI
Ensembl
PMID:9642267 GO_REF:0000107 NCBI chr 1:55,074,255...55,156,632
Ensembl chr 1:55,074,209...55,156,599
JBrowse link
G UNG uracil DNA glycosylase acts_upstream_of_or_within
involved_in
ISO
IEA
(PMID:17015724) MGI
Ensembl
PMID:17015724 GO_REF:0000107 NCBI chr11:104,302,507...104,325,160 JBrowse link
G XRCC4 X-ray repair cross complementing 4 acts_upstream_of_or_within ISO (PMID:17713479) MGI PMID:17713479 NCBI chr 4:77,182,569...77,468,786
Ensembl chr 4:77,182,793...77,468,775
JBrowse link
isotype switching to IgA isotypes term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G CCR6 C-C motif chemokine receptor 6 involved_in ISO (PMID:27174992) UniProt PMID:27174992 NCBI chr13:94,865,480...94,894,331
Ensembl chr13:94,865,936...94,894,315
JBrowse link
isotype switching to IgD isotypes term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G FDCSP follicular dendritic cell secreted protein acts_upstream_of_positive_effect ISO (PMID:17548624) MGI PMID:17548624 NCBI chr 7:18,711,145...18,721,926
Ensembl chr 7:18,716,973...18,721,350
JBrowse link
isotype switching to IgE isotypes term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G BCL6 BCL6 transcription repressor involved_in
acts_upstream_of
IEA
ISO
(PMID:10490661) Ensembl
MGI
PMID:10490661 GO_REF:0000107 NCBI chr15:81,997,659...82,022,059
Ensembl chr15:81,998,545...82,009,946
JBrowse link
G FDCSP follicular dendritic cell secreted protein acts_upstream_of_or_within_negative_effect ISO (PMID:17548624) MGI PMID:17548624 NCBI chr 7:18,711,145...18,721,926
Ensembl chr 7:18,716,973...18,721,350
JBrowse link
G FOXP3 forkhead box P3 acts_upstream_of ISO (PMID:16275384) MGI PMID:16275384 NCBI chr  X:46,349,890...46,365,133 JBrowse link
G FOXP3 forkhead box P3 involved_in IEA Ensembl GO_REF:0000107 Ensembl chr  X:46,346,754...46,356,928 JBrowse link
G IL4 interleukin 4 acts_upstream_of ISO (PMID:14988498) MGI PMID:14988498 NCBI chr23:35,492,158...35,501,349
Ensembl chr23:35,492,939...35,501,258
JBrowse link
G STAT6 signal transducer and activator of transcription 6 involved_in
acts_upstream_of
IEA
ISO
(PMID:10490661) Ensembl
MGI
PMID:10490661 GO_REF:0000107 NCBI chr11:53,005,378...53,020,899
Ensembl chr11:53,006,145...53,021,203
JBrowse link
isotype switching to IgG isotypes term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G FDCSP follicular dendritic cell secreted protein acts_upstream_of_or_within_negative_effect ISO (PMID:17548624) MGI PMID:17548624 NCBI chr 7:18,711,145...18,721,926
Ensembl chr 7:18,716,973...18,721,350
JBrowse link
G HSPD1 heat shock protein family D (Hsp60) member 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr10:83,003,266...83,017,397
Ensembl chr10:83,003,717...83,017,363
JBrowse link
G IL4 interleukin 4 acts_upstream_of ISO (PMID:14988498) MGI PMID:14988498 NCBI chr23:35,492,158...35,501,349
Ensembl chr23:35,492,939...35,501,258
JBrowse link
G LOC103238722 60 kDa heat shock protein, mitochondrial-like involved_in IEA Ensembl GO_REF:0000107 NCBI chr11:66,923,204...66,925,397 JBrowse link
lymph node development term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G CCL21 C-C motif chemokine ligand 21 acts_upstream_of_or_within ISO (PMID:12732660) MGI PMID:12732660 NCBI chr12:45,787,118...45,788,506
Ensembl chr12:45,787,356...45,908,711
JBrowse link
G CD248 CD248 molecule involved_in
acts_upstream_of_or_within
IEA
ISO
(PMID:20432232) Ensembl
MGI
PMID:20432232 GO_REF:0000107 NCBI chr 1:7,958,583...7,961,159
Ensembl chr 1:7,958,616...7,960,889
JBrowse link
G CD2AP CD2 associated protein involved_in
acts_upstream_of_or_within
IEA
ISO
(PMID:24218450) Ensembl
MGI
PMID:24218450 GO_REF:0000107 NCBI chr17:24,664,245...24,815,786
Ensembl chr17:24,663,872...24,815,829
JBrowse link
G CXCL13 C-X-C motif chemokine ligand 13 acts_upstream_of_or_within
involved_in
ISO
IEA
(PMID:12732660) MGI
Ensembl
PMID:12732660 GO_REF:0000107 NCBI chr 7:26,101,489...26,108,430
Ensembl chr 7:26,102,714...26,108,690
JBrowse link
G CXCR5 C-X-C motif chemokine receptor 5 involved_in
acts_upstream_of_or_within
IEA
ISO
(PMID:12732660) Ensembl
MGI
InterPro
PMID:12732660 GO_REF:0000002 GO_REF:0000107 NCBI chr 1:110,253,792...110,267,251
Ensembl chr 1:110,254,723...110,265,597
JBrowse link
G FADD Fas associated via death domain involved_in ISO (PMID:21876153) UniProt PMID:21876153 NCBI chr 1:4,358,314...4,361,863 JBrowse link
G FLT3 fms related receptor tyrosine kinase 3 acts_upstream_of_or_within ISO (PMID:20457904) MGI PMID:20457904 NCBI chr 3:7,117,579...7,222,600
Ensembl chr 3:7,116,947...7,222,849
JBrowse link
G IKZF1 IKAROS family zinc finger 1 acts_upstream_of_or_within ISO (PMID:7923373) MGI PMID:7923373 NCBI chr21:8,398,902...8,500,431
Ensembl chr21:8,402,719...8,484,723
JBrowse link
G IL15 interleukin 15 involved_in
acts_upstream_of_or_within
IEA
ISO
(PMID:10704459) Ensembl
MGI
PMID:10704459 GO_REF:0000107 NCBI chr 7:88,548,773...88,644,977
Ensembl chr 7:88,548,671...88,645,488
JBrowse link
G IL7R interleukin 7 receptor acts_upstream_of_or_within
involved_in
ISO
IEA
(PMID:12732660) MGI
Ensembl
PMID:12732660 GO_REF:0000107 NCBI chr 4:34,701,724...34,724,241
Ensembl chr 4:34,701,531...34,721,361
JBrowse link
G LOC103230557 roquin-1 involved_in
acts_upstream_of_or_within
IEA
ISO
(PMID:23583643) Ensembl
MGI
PMID:23583643 GO_REF:0000107 NCBI chr25:55,167,418...55,258,964
Ensembl chr25:55,167,077...55,279,088
JBrowse link
G LTA lymphotoxin alpha acts_upstream_of_or_within ISO (PMID:10415063)
(PMID:8171322)
(PMID:7636227)
(PMID:9368616)
(PMID:9565643)
MGI PMID:7636227 PMID:8171322 PMID:9368616 PMID:9565643 PMID:10415063
G LTB lymphotoxin beta acts_upstream_of_or_within ISO (PMID:9256477)
(PMID:9133428)
MGI PMID:9133428 PMID:9256477
G NKX2-3 NK2 homeobox 3 involved_in
acts_upstream_of_or_within
IEA
ISO
(PMID:10926756)
(PMID:10790368)
Ensembl
MGI
PMID:10790368 PMID:10926756 GO_REF:0000107 NCBI chr 9:92,590,342...92,594,749
Ensembl chr 9:92,591,375...92,594,842
JBrowse link
G PDPN podoplanin involved_in ISO (PMID:25347465) UniProt PMID:25347465 NCBI chr20:118,644,060...118,679,508
Ensembl chr20:118,644,051...118,679,311
JBrowse link
G POLB DNA polymerase beta acts_upstream_of_or_within
involved_in
ISO
IEA
(PMID:24388753) MGI
Ensembl
PMID:24388753 GO_REF:0000107 NCBI chr 8:40,332,165...40,368,065
Ensembl chr 8:40,332,208...40,372,582
JBrowse link
G RC3H2 ring finger and CCCH-type domains 2 involved_in
acts_upstream_of_or_within
IEA
ISO
(PMID:23583643) Ensembl
MGI
PMID:23583643 GO_REF:0000107 NCBI chr12:15,230,206...15,283,253
Ensembl chr12:15,238,124...15,280,689
JBrowse link
G RCBTB2 RCC1 and BTB domain containing protein 2 acts_upstream_of_or_within ISO (PMID:26291700) MGI PMID:26291700 NCBI chr 3:26,401,787...26,447,315
Ensembl chr 3:26,401,786...26,437,619
JBrowse link
G RIPK3 receptor interacting serine/threonine kinase 3 involved_in IEA Ensembl GO_REF:0000107 NCBI chr24:1,318,265...1,322,610
Ensembl chr24:1,318,216...1,322,462
JBrowse link
G RORC RAR related orphan receptor C acts_upstream_of_or_within
involved_in
ISO (PMID:14691482) MGI
UniProt
PMID:14691482 NCBI chr20:11,854,911...11,880,221
Ensembl chr20:11,855,005...11,879,717
JBrowse link
G SPNS2 SPNS lysolipid transporter 2, sphingosine-1-phosphate involved_in
acts_upstream_of_or_within
IEA
ISO
(PMID:23180825) Ensembl
MGI
PMID:23180825 GO_REF:0000107 NCBI chr16:3,978,262...4,019,950
Ensembl chr16:3,978,845...4,022,678
JBrowse link
G TGFB1 transforming growth factor beta 1 involved_in
acts_upstream_of_or_within
IEA
ISO
(PMID:1436033) Ensembl
MGI
PMID:1436033 GO_REF:0000107 NCBI chr 6:35,651,583...35,674,387
Ensembl chr 6:35,648,677...35,674,365
JBrowse link
G TNFRSF11A TNF receptor superfamily member 11a involved_in
acts_upstream_of_or_within
IEA
ISO
(PMID:10500098) Ensembl
TreeGrafter
MGI
PMID:10500098 GO_REF:0000107 GO_REF:0000118 NCBI chr18:17,385,251...17,446,442 JBrowse link
G TOX thymocyte selection associated high mobility group box involved_in
acts_upstream_of_or_within
IEA
ISO
(PMID:20818394) Ensembl
MGI
PMID:20818394 GO_REF:0000107 NCBI chr 8:54,777,490...55,086,819
Ensembl chr 8:54,776,015...54,927,091
JBrowse link
G TRAF3IP2 TRAF3 interacting protein 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chr13:62,272,893...62,320,096
Ensembl chr13:62,285,589...62,324,312
JBrowse link
mucosa-associated lymphoid tissue development term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G NKX2-3 NK2 homeobox 3 involved_in
acts_upstream_of_or_within
IEA
ISO
(PMID:10926756) Ensembl
MGI
PMID:10926756 GO_REF:0000107 NCBI chr 9:92,590,342...92,594,749
Ensembl chr 9:92,591,375...92,594,842
JBrowse link
G RORC RAR related orphan receptor C acts_upstream_of_or_within ISO (PMID:15247480) MGI PMID:15247480 NCBI chr20:11,854,911...11,880,221
Ensembl chr20:11,855,005...11,879,717
JBrowse link
natural killer cell tolerance induction term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G HAVCR2 hepatitis A virus cellular receptor 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chr23:59,479,794...59,501,532
Ensembl chr23:59,475,826...59,500,836
JBrowse link
G LOC103221837 popy class I histocompatibility antigen, alpha chain E involved_in IEA Ensembl GO_REF:0000107 NCBI chr17:41,940,842...42,692,045
Ensembl chr17:41,941,869...41,946,176
JBrowse link
G LOC103242599 galectin-9 involved_in ISO (PMID:25578313) UniProt PMID:25578313 NCBI chr16:21,421,034...21,439,583 JBrowse link
G LOC119618283 patr class I histocompatibility antigen, alpha chain E involved_in IEA Ensembl GO_REF:0000107
negative regulation of isotype switching term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G PARP3 poly(ADP-ribose) polymerase family member 3 involved_in IEA Ensembl GO_REF:0000107 NCBI chr22:13,310,885...13,316,807
Ensembl chr22:13,310,938...13,320,680
JBrowse link
negative regulation of isotype switching to IgE isotypes term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G BCL6 BCL6 transcription repressor involved_in
acts_upstream_of_or_within
IEA
ISO
(PMID:10490661) Ensembl
MGI
PMID:10490661 GO_REF:0000107 NCBI chr15:81,997,659...82,022,059
Ensembl chr15:81,998,545...82,009,946
JBrowse link
G FOXP3 forkhead box P3 acts_upstream_of_or_within ISO (PMID:16275384) MGI PMID:16275384 NCBI chr  X:46,349,890...46,365,133 JBrowse link
G FOXP3 forkhead box P3 involved_in IEA Ensembl GO_REF:0000107 Ensembl chr  X:46,346,754...46,356,928 JBrowse link
G NDFIP1 Nedd4 family interacting protein 1 involved_in
acts_upstream_of_or_within
IEA
ISO
(PMID:17137798) Ensembl
MGI
PMID:17137798 GO_REF:0000107 NCBI chr23:44,737,432...44,783,409
Ensembl chr23:44,737,422...44,775,657
JBrowse link
negative regulation of T cell anergy term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G CD86 CD86 molecule ISO RGD PMID:18424705 RGD:4892228 NCBI chr22:58,741,534...58,805,417
Ensembl chr22:58,741,525...58,805,366
JBrowse link
negative regulation of tolerance induction term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G PDCD1 programmed cell death 1 acts_upstream_of_or_within ISO (PMID:23636058) MGI PMID:23636058 NCBI chr10:127,877,383...127,886,234
Ensembl chr10:127,878,554...127,886,088
JBrowse link
peripheral T cell tolerance induction term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G AIRE autoimmune regulator involved_in IEA Ensembl GO_REF:0000107 NCBI chr 2:88,019,122...88,031,998
Ensembl chr 2:88,019,522...88,031,801
JBrowse link
Peyer's patch development term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ADA adenosine deaminase acts_upstream_of_or_within ISO (PMID:10720488) MGI PMID:10720488 NCBI chr 2:19,167,209...19,200,233 JBrowse link
G CACNB4 calcium voltage-gated channel auxiliary subunit beta 4 acts_upstream_of_or_within
involved_in
ISO
IEA
(PMID:5037658) MGI
Ensembl
PMID:5037658 GO_REF:0000107 NCBI chr10:37,240,749...37,518,174
Ensembl chr10:37,246,991...37,388,059
JBrowse link
G ID2 inhibitor of DNA binding 2 acts_upstream_of_or_within ISO (PMID:17452521) MGI PMID:17452521 NCBI chr14:98,962,001...98,964,486 JBrowse link
G IKZF1 IKAROS family zinc finger 1 acts_upstream_of_or_within ISO (PMID:7923373) MGI PMID:7923373 NCBI chr21:8,398,902...8,500,431
Ensembl chr21:8,402,719...8,484,723
JBrowse link
G LOC103243413 signal transducer and activator of transcription 5B acts_upstream_of_or_within
involved_in
ISO
IEA
(PMID:15294943) MGI
Ensembl
PMID:15294943 GO_REF:0000107 NCBI chr16:63,997,486...64,070,392
Ensembl chr16:63,997,441...64,070,445
JBrowse link
G NKX2-3 NK2 homeobox 3 involved_in
acts_upstream_of_or_within
IEA
ISO
(PMID:10790368) Ensembl
MGI
PMID:10790368 GO_REF:0000107 NCBI chr 9:92,590,342...92,594,749
Ensembl chr 9:92,591,375...92,594,842
JBrowse link
G RORC RAR related orphan receptor C involved_in ISO (PMID:14691482) UniProt PMID:14691482 NCBI chr20:11,854,911...11,880,221
Ensembl chr20:11,855,005...11,879,717
JBrowse link
G STAT5A signal transducer and activator of transcription 5A acts_upstream_of_or_within ISO (PMID:15294943) MGI PMID:15294943 NCBI chr16:63,959,265...63,986,627
Ensembl chr16:63,960,515...63,985,026
JBrowse link
G TCF3 transcription factor 3 acts_upstream_of_or_within ISO (PMID:17452521) MGI PMID:17452521 NCBI chr 6:1,393,147...1,440,515
Ensembl chr 6:1,393,107...1,440,479
JBrowse link
G TOX thymocyte selection associated high mobility group box involved_in
acts_upstream_of_or_within
IEA
ISO
(PMID:20818394) Ensembl
MGI
PMID:20818394 GO_REF:0000107 NCBI chr 8:54,777,490...55,086,819
Ensembl chr 8:54,776,015...54,927,091
JBrowse link
Peyer's patch morphogenesis term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ARTN artemin involved_in IEA Ensembl GO_REF:0000107 NCBI chr20:88,869,463...88,874,036
Ensembl chr20:88,869,941...88,871,049
JBrowse link
G FOXL1 forkhead box L1 involved_in
acts_upstream_of_or_within
IEA
ISO
(PMID:12648490) Ensembl
MGI
PMID:12648490 GO_REF:0000107 NCBI chr 5:71,960,154...71,968,629
Ensembl chr 5:71,963,965...71,965,002
JBrowse link
G RET ret proto-oncogene involved_in IEA Ensembl GO_REF:0000107 NCBI chr 9:38,746,088...38,798,773
Ensembl chr 9:38,769,170...38,796,712
JBrowse link
positive regulation of B cell tolerance induction term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G TGFBR2 transforming growth factor beta receptor 2 involved_in
acts_upstream_of_or_within
IEA
ISO
(PMID:16973387) Ensembl
MGI
PMID:16973387 GO_REF:0000107 NCBI chr15:75,112,903...75,200,263
Ensembl chr15:75,112,561...75,197,711
JBrowse link
positive regulation of central B cell tolerance induction term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G FOXJ1 forkhead box J1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr16:45,536,973...45,544,331
Ensembl chr16:45,539,510...45,544,299
JBrowse link
positive regulation of interleukin-4-dependent isotype switching to IgE isotypes term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G TNFSF4 TNF superfamily member 4 involved_in ISO (PMID:12496423) BHF-UCL PMID:12496423 NCBI chr25:55,714,291...55,998,009
Ensembl chr25:55,974,691...55,997,374
JBrowse link
positive regulation of isotype switching term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G EXOSC3 exosome component 3 acts_upstream_of_or_within
involved_in
ISO
IEA
(PMID:21255825) MGI
Ensembl
PMID:21255825 GO_REF:0000107 NCBI chr12:42,798,609...42,819,431
Ensembl chr12:42,799,067...42,803,471
JBrowse link
G EXOSC6 exosome component 6 acts_upstream_of_or_within ISO (PMID:21255825) MGI PMID:21255825 NCBI chr 5:53,397,973...53,399,526 JBrowse link
G HMCES 5-hydroxymethylcytosine binding, ES cell specific involved_in IEA Ensembl GO_REF:0000107 NCBI chr22:51,759,776...51,785,902
Ensembl chr22:51,759,715...51,785,987
JBrowse link
G KMT5B lysine methyltransferase 5B involved_in IEA Ensembl GO_REF:0000107 NCBI chr 1:6,308,565...6,367,272
Ensembl chr 1:6,308,742...6,367,393
JBrowse link
G KMT5C lysine methyltransferase 5C involved_in IEA Ensembl GO_REF:0000107 NCBI chr 6:47,942,100...47,950,364
Ensembl chr 6:47,944,197...47,949,693
JBrowse link
G MAD2L2 mitotic arrest deficient 2 like 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chr20:120,099,928...120,115,954
Ensembl chr20:120,110,269...120,116,083
JBrowse link
G PAXIP1 PAX interacting protein 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr21:123,095,968...123,156,157
Ensembl chr21:123,095,966...123,155,800
JBrowse link
G RIF1 replication timing regulatory factor 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr10:36,845,751...36,937,040
Ensembl chr10:36,845,777...36,907,015
JBrowse link
G SHLD1 shieldin complex subunit 1 involved_in IEA TreeGrafter
Ensembl
GO_REF:0000107 GO_REF:0000118 NCBI chr 2:32,265,882...32,381,411
Ensembl chr 2:32,265,788...32,381,395
JBrowse link
G SHLD2 shieldin complex subunit 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 9:44,565,105...44,652,926
Ensembl chr 9:44,564,792...44,605,562
JBrowse link
G SHLD3 shieldin complex subunit 3 involved_in ISO (PMID:29656893) UniProt PMID:29656893 NCBI chr 4:61,817,386...61,823,423 JBrowse link
G TFRC transferrin receptor involved_in IEA Ensembl GO_REF:0000107 NCBI chr15:91,102,153...91,134,994
Ensembl chr15:91,102,817...91,135,584
JBrowse link
G TP53BP1 tumor protein p53 binding protein 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr26:39,489,925...39,595,096
Ensembl chr26:39,508,600...39,594,927
JBrowse link
positive regulation of isotype switching to IgA isotypes term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G LOC103242307 TNF superfamily member 13 acts_upstream_of_or_within
involved_in
ISO
IEA
(PMID:14988498) MGI
TreeGrafter
PMID:14988498 GO_REF:0000118 NCBI chr16:6,935,073...6,938,792
Ensembl chr16:6,926,584...6,938,019
JBrowse link
G LOC103246803 mismatch repair endonuclease PMS2 involved_in IEA Ensembl GO_REF:0000107 NCBI chr28:15,174,359...15,209,962
Ensembl chr28:15,172,100...15,209,852
JBrowse link
G MLH1 mutL homolog 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr15:2,364,537...2,418,379
Ensembl chr15:2,364,738...2,418,393
JBrowse link
G MSH2 mutS homolog 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chr14:59,730,101...59,802,857
Ensembl chr14:59,729,789...59,802,819
JBrowse link
G NSD2 nuclear receptor binding SET domain protein 2 involved_in
acts_upstream_of_or_within
IEA
ISO
(PMID:23241889) Ensembl
MGI
PMID:23241889 GO_REF:0000107 NCBI chr27:46,787,325...46,896,898
Ensembl chr27:46,787,154...46,867,792
JBrowse link
G TGFB1 transforming growth factor beta 1 acts_upstream_of_or_within
involved_in
ISO
IEA
(PMID:14988498) MGI
Ensembl
PMID:14988498 GO_REF:0000107 NCBI chr 6:35,651,583...35,674,387
Ensembl chr 6:35,648,677...35,674,365
JBrowse link
positive regulation of isotype switching to IgE isotypes term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G CLCF1 cardiotrophin like cytokine factor 1 involved_in ISO (PMID:12023368) BHF-UCL PMID:12023368 NCBI chr 1:6,890,751...6,900,370 JBrowse link
G CLCF1 cardiotrophin like cytokine factor 1 involved_in IEA Ensembl GO_REF:0000107 Ensembl chr 1:6,896,591...6,899,396 JBrowse link
G IL4 interleukin 4 acts_upstream_of_or_within ISO (PMID:14988498) MGI PMID:14988498 NCBI chr23:35,492,158...35,501,349
Ensembl chr23:35,492,939...35,501,258
JBrowse link
G STAT6 signal transducer and activator of transcription 6 involved_in
acts_upstream_of_or_within
IEA
ISO
(PMID:10490661) Ensembl
MGI
PMID:10490661 GO_REF:0000107 NCBI chr11:53,005,378...53,020,899
Ensembl chr11:53,006,145...53,021,203
JBrowse link
positive regulation of isotype switching to IgG isotypes term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ATAD5 ATPase family AAA domain containing 5 involved_in
acts_upstream_of_or_within
IEA
ISO
(PMID:25404367) Ensembl
MGI
PMID:25404367 GO_REF:0000107 NCBI chr16:25,536,911...25,597,911
Ensembl chr16:25,538,131...25,597,695
JBrowse link
G CD28 CD28 molecule acts_upstream_of_or_within
involved_in
ISO
IEA
(PMID:7688139) MGI
Ensembl
PMID:7688139 GO_REF:0000107 NCBI chr10:89,471,710...89,505,152
Ensembl chr10:89,471,730...89,500,387
JBrowse link
G CD40 CD40 molecule involved_in
acts_upstream_of_or_within
IEA
ISO
(PMID:12882831) Ensembl
MGI
PMID:12882831 GO_REF:0000107 NCBI chr 2:17,753,713...17,765,134
Ensembl chr 2:17,753,394...17,764,566
JBrowse link
G IFNG interferon gamma acts_upstream_of_or_within ISO (PMID:12882831) MGI PMID:12882831 NCBI chr11:63,785,493...63,791,071
Ensembl chr11:63,786,041...63,790,473
JBrowse link
G IL2 interleukin 2 involved_in
acts_upstream_of_or_within
IEA
ISO
(PMID:1830926) Ensembl
MGI
PMID:1830926 GO_REF:0000107 NCBI chr 7:69,729,635...69,736,279
Ensembl chr 7:69,730,282...69,734,969
JBrowse link
G IL4 interleukin 4 acts_upstream_of_or_within ISO (PMID:12882831), (PMID:14988498) MGI PMID:12882831 PMID:14988498 NCBI chr23:35,492,158...35,501,349
Ensembl chr23:35,492,939...35,501,258
JBrowse link
G LOC103246803 mismatch repair endonuclease PMS2 involved_in IEA Ensembl GO_REF:0000107 NCBI chr28:15,174,359...15,209,962
Ensembl chr28:15,172,100...15,209,852
JBrowse link
G MLH1 mutL homolog 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr15:2,364,537...2,418,379
Ensembl chr15:2,364,738...2,418,393
JBrowse link
G MSH2 mutS homolog 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chr14:59,730,101...59,802,857
Ensembl chr14:59,729,789...59,802,819
JBrowse link
G PAGR1 PAXIP1 associated glutamate rich protein 1 involved_in ISO (PMID:26744420) UniProt PMID:26744420 NCBI chr 5:26,833,333...26,837,655
Ensembl chr 5:26,833,675...26,837,640
JBrowse link
G PAXIP1 PAX interacting protein 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr21:123,095,968...123,156,157
Ensembl chr21:123,095,966...123,155,800
JBrowse link
G PTPRC protein tyrosine phosphatase receptor type C involved_in
acts_upstream_of_or_within
IEA
ISO
(PMID:9015183) Ensembl
MGI
PMID:9015183 GO_REF:0000107 NCBI chr25:30,655,014...30,777,367
Ensembl chr25:30,653,044...30,777,303
JBrowse link
G TBX21 T-box transcription factor 21 involved_in
acts_upstream_of_or_within
IEA
ISO
(PMID:12882831) Ensembl
MGI
PMID:12882831 GO_REF:0000107 NCBI chr16:68,131,258...68,145,579
Ensembl chr16:68,131,536...68,144,415
JBrowse link
positive regulation of macrophage tolerance induction term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G IRAK3 interleukin 1 receptor associated kinase 3 involved_in IEA Ensembl GO_REF:0000107 NCBI chr11:61,868,817...61,920,896
Ensembl chr11:61,869,173...61,920,406
JBrowse link
positive regulation of peripheral T cell tolerance induction term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G FOXP3 forkhead box P3 acts_upstream_of_or_within ISO (PMID:16532000) MGI PMID:16532000 NCBI chr  X:46,349,890...46,365,133 JBrowse link
G FOXP3 forkhead box P3 involved_in IEA Ensembl GO_REF:0000107 Ensembl chr  X:46,346,754...46,356,928 JBrowse link
positive regulation of T cell anergy term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G CBLB Cbl proto-oncogene B involved_in
acts_upstream_of_or_within
IEA
ISO
(PMID:14973438) Ensembl
MGI
PMID:14973438 GO_REF:0000107 NCBI chr22:74,961,831...75,181,307
Ensembl chr22:74,961,859...75,178,548
JBrowse link
G CD3E CD3e molecule acts_upstream_of_or_within
involved_in
ISO
IEA
(PMID:14973438) MGI
Ensembl
PMID:14973438 GO_REF:0000107 NCBI chr 1:109,681,142...109,692,835
Ensembl chr 1:109,681,065...109,692,839
JBrowse link
G FOXP3 forkhead box P3 acts_upstream_of_or_within ISO (PMID:16945588) MGI PMID:16945588 NCBI chr  X:46,349,890...46,365,133 JBrowse link
G FOXP3 forkhead box P3 involved_in IEA Ensembl GO_REF:0000107 Ensembl chr  X:46,346,754...46,356,928 JBrowse link
G ITCH itchy E3 ubiquitin protein ligase acts_upstream_of_or_within
involved_in
ISO
IEA
(PMID:14973438) MGI
Ensembl
PMID:14973438 GO_REF:0000107 NCBI chr 2:38,671,170...38,808,621
Ensembl chr 2:38,701,396...38,805,005
JBrowse link
G LILRB4 leukocyte immunoglobulin like receptor B4 involved_in ISO (PMID:16493035) ARUK-UCL PMID:16493035 NCBI chr 6:47,299,764...47,333,711 JBrowse link
G LOC103230356 uncharacterized LOC103230356 involved_in IEA Ensembl GO_REF:0000107 NCBI chr25:29,230,358...29,380,617
Ensembl chr25:29,233,558...29,379,922
JBrowse link
positive regulation of T cell tolerance induction term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G FOXP3 forkhead box P3 acts_upstream_of_or_within ISO (PMID:16945588) MGI PMID:16945588 NCBI chr  X:46,349,890...46,365,133 JBrowse link
G FOXP3 forkhead box P3 involved_in IEA Ensembl GO_REF:0000107 Ensembl chr  X:46,346,754...46,356,928 JBrowse link
G IDO1 indoleamine 2,3-dioxygenase 1 involved_in
acts_upstream_of_or_within
IEA
ISO
(PMID:9712583) Ensembl
MGI
PMID:9712583 GO_REF:0000107 NCBI chr 8:37,930,910...37,950,790
Ensembl chr 8:37,930,562...37,946,505
JBrowse link
G TGFBR2 transforming growth factor beta receptor 2 involved_in
acts_upstream_of_or_within
IEA
ISO
(PMID:16973387) Ensembl
MGI
PMID:16973387 GO_REF:0000107 NCBI chr15:75,112,903...75,200,263
Ensembl chr15:75,112,561...75,197,711
JBrowse link
positive regulation of tolerance induction to self antigen term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G TGFBR2 transforming growth factor beta receptor 2 involved_in
acts_upstream_of_or_within
IEA
ISO
(PMID:16973387) Ensembl
MGI
PMID:16973387 GO_REF:0000107 NCBI chr15:75,112,903...75,200,263
Ensembl chr15:75,112,561...75,197,711
JBrowse link
regulation of isotype switching term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G APLF aprataxin and PNKP like factor acts_upstream_of_or_within ISO (PMID:21211721) MGI PMID:21211721 NCBI chr14:38,539,398...38,636,666
Ensembl chr14:38,540,084...38,636,569
JBrowse link
G SUPT6H SPT6 homolog, histone chaperone and transcription elongation factor involved_in IEA Ensembl GO_REF:0000107 NCBI chr16:22,444,864...22,470,248 JBrowse link
regulation of isotype switching to IgG isotypes term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G FOXP3 forkhead box P3 acts_upstream_of_or_within ISO (PMID:16275384) MGI PMID:16275384 NCBI chr  X:46,349,890...46,365,133 JBrowse link
G FOXP3 forkhead box P3 involved_in IEA Ensembl GO_REF:0000107 Ensembl chr  X:46,346,754...46,356,928 JBrowse link
G IL27RA interleukin 27 receptor subunit alpha acts_upstream_of_or_within
involved_in
ISO
IEA
(PMID:11057672) MGI
Ensembl
PMID:11057672 GO_REF:0000107 NCBI chr 6:12,679,270...12,699,254
Ensembl chr 6:12,686,838...12,701,867
JBrowse link
G NDFIP1 Nedd4 family interacting protein 1 involved_in
acts_upstream_of_or_within
IEA
ISO
(PMID:17137798) Ensembl
MGI
PMID:17137798 GO_REF:0000107 NCBI chr23:44,737,432...44,783,409
Ensembl chr23:44,737,422...44,775,657
JBrowse link
G SLC15A4 solute carrier family 15 member 4 involved_in IEA Ensembl GO_REF:0000107 NCBI chr11:124,170,785...124,204,358
Ensembl chr11:124,169,732...124,204,200
JBrowse link
regulation of T cell anergy term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G FOXP3 forkhead box P3 involved_in ISO (PMID:17377532) UniProt PMID:17377532 NCBI chr  X:46,349,890...46,365,133 JBrowse link
G FOXP3 forkhead box P3 involved_in IEA Ensembl GO_REF:0000107 Ensembl chr  X:46,346,754...46,356,928 JBrowse link
G LOC103234682 galectin-10-like involved_in IEA Ensembl GO_REF:0000107 NCBI chr 6:34,281,363...34,287,378
Ensembl chr 6:34,281,333...34,286,645
JBrowse link
G PHLPP1 PH domain and leucine rich repeat protein phosphatase 1 involved_in ISO (PMID:21498666) UniProt PMID:21498666 NCBI chr18:16,786,128...17,051,250 JBrowse link
G PHLPP1 PH domain and leucine rich repeat protein phosphatase 1 involved_in IEA Ensembl GO_REF:0000107 Ensembl chr18:16,785,503...17,049,752 JBrowse link
regulation of T cell tolerance induction term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G IL2RA interleukin 2 receptor subunit alpha involved_in IEA Ensembl GO_REF:0000107 NCBI chr 9:6,134,961...6,187,731
Ensembl chr 9:6,141,430...6,149,447
JBrowse link
regulation of tolerance induction term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G HMGB1 high mobility group box 1 involved_in ISO (PMID:18631454) UniProt PMID:18631454 NCBI chr 3:9,353,333...9,357,765 JBrowse link
G MARCHF7 membrane associated ring-CH-type finger 7 acts_upstream_of_or_within
involved_in
ISO
IEA
(PMID:15670816) MGI
Ensembl
PMID:15670816 GO_REF:0000107 NCBI chr10:45,121,817...45,178,547
Ensembl chr10:45,121,538...45,177,271
JBrowse link
regulation of tolerance induction dependent upon immune response term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G HAVCR2 hepatitis A virus cellular receptor 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chr23:59,479,794...59,501,532
Ensembl chr23:59,475,826...59,500,836
JBrowse link
somatic diversification of immune receptors via somatic mutation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ADAR adenosine deaminase RNA specific involved_in
acts_upstream_of_or_within
IEA
ISO
(PMID:23209284) Ensembl
MGI
PMID:23209284 GO_REF:0000107 NCBI chr20:9,194,611...9,241,102
Ensembl chr20:9,219,937...9,241,329
JBrowse link
somatic diversification of immunoglobulins term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G AICDA activation induced cytidine deaminase involved_in IEA Ensembl GO_REF:0000107 NCBI chr11:8,426,920...8,438,331
Ensembl chr11:8,428,922...8,431,641
JBrowse link
G CTNNBL1 catenin beta like 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 2:25,877,750...26,055,283
Ensembl chr 2:25,877,700...26,055,209
JBrowse link
G POLB DNA polymerase beta acts_upstream_of_or_within
involved_in
ISO
IEA
(PMID:24388753) MGI
Ensembl
PMID:24388753 GO_REF:0000107 NCBI chr 8:40,332,165...40,368,065
Ensembl chr 8:40,332,208...40,372,582
JBrowse link
somatic hypermutation of immunoglobulin genes term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G AICDA activation induced cytidine deaminase involved_in IEA Ensembl GO_REF:0000107 NCBI chr11:8,426,920...8,438,331
Ensembl chr11:8,428,922...8,431,641
JBrowse link
G EXO1 exonuclease 1 acts_upstream_of_or_within
involved_in
ISO
IEA
(PMID:14716311) MGI
Ensembl
PMID:14716311 GO_REF:0000107 NCBI chr25:78,934,337...78,976,346
Ensembl chr25:78,934,459...78,976,219
JBrowse link
G HMCES 5-hydroxymethylcytosine binding, ES cell specific involved_in IEA Ensembl GO_REF:0000107 NCBI chr22:51,759,776...51,785,902
Ensembl chr22:51,759,715...51,785,987
JBrowse link
G LOC103246803 mismatch repair endonuclease PMS2 acts_upstream_of_or_within
involved_in
ISO
IEA
(PMID:10429667) MGI
Ensembl
TreeGrafter
PMID:10429667 GO_REF:0000107 GO_REF:0000118 NCBI chr28:15,174,359...15,209,962
Ensembl chr28:15,172,100...15,209,852
JBrowse link
G MCM3AP minichromosome maintenance complex component 3 associated protein involved_in IEA Ensembl GO_REF:0000107 NCBI chr 2:89,852,450...89,900,002
Ensembl chr 2:89,852,447...89,890,054
JBrowse link
G MLH1 mutL homolog 1 involved_in
acts_upstream_of_or_within
IEA
ISO
(PMID:10092760), (PMID:10429667) Ensembl
TreeGrafter
MGI
PMID:10092760 PMID:10429667 GO_REF:0000107 GO_REF:0000118 NCBI chr15:2,364,537...2,418,379
Ensembl chr15:2,364,738...2,418,393
JBrowse link
G MSH2 mutS homolog 2 involved_in
acts_upstream_of_or_within
NOT|acts_upstream_of_or_within
IEA
ISO
(PMID:9697842), (PMID:9697843)
(PMID:9607916)
(PMID:15494304)
(PMID:9607915)
(PMID:14568978)
Ensembl
MGI
PMID:9607915 PMID:9607916 PMID:9697842 PMID:9697843 PMID:14568978 More... GO_REF:0000107 NCBI chr14:59,730,101...59,802,857
Ensembl chr14:59,729,789...59,802,819
JBrowse link
G MSH3 mutS homolog 3 NOT|acts_upstream_of_or_within ISO (PMID:10662804) MGI PMID:10662804 NCBI chr 4:74,811,181...75,032,067
Ensembl chr 4:74,811,198...75,032,005
JBrowse link
G MSH6 mutS homolog 6 involved_in
acts_upstream_of_or_within
IEA
ISO
(PMID:10662804), (PMID:15238604), (PMID:17015724)
(PMID:16618598)
Ensembl
MGI
PMID:10662804 PMID:15238604 PMID:16618598 PMID:17015724 GO_REF:0000107 NCBI chr14:59,375,602...59,400,252
Ensembl chr14:59,375,691...59,400,174
JBrowse link
G NUGGC nuclear GTPase, germinal center associated acts_upstream_of_or_within ISO (PMID:22833677) MGI PMID:22833677 NCBI chr 8:26,129,593...26,190,881 JBrowse link
G POLB DNA polymerase beta acts_upstream_of_or_within
involved_in
ISO
IEA
(PMID:24388753) MGI
Ensembl
PMID:24388753 GO_REF:0000107 NCBI chr 8:40,332,165...40,368,065
Ensembl chr 8:40,332,208...40,372,582
JBrowse link
G POLM DNA polymerase mu acts_upstream_of_or_within ISO (PMID:15789338) MGI PMID:15789338 NCBI chr21:14,585,912...14,596,127
Ensembl chr21:14,586,164...14,599,248
JBrowse link
G POLQ DNA polymerase theta involved_in IEA Ensembl GO_REF:0000107 NCBI chr22:59,336,506...59,448,609
Ensembl chr22:59,336,842...59,448,604
JBrowse link
G SAMHD1 SAM and HD domain containing deoxynucleoside triphosphate triphosphohydrolase 1 involved_in ISO (PMID:29669924) UniProt PMID:29669924 NCBI chr 2:57,641,634...57,699,685
Ensembl chr 2:57,639,046...57,699,525
JBrowse link
G UNG uracil DNA glycosylase acts_upstream_of_or_within
involved_in
ISO
IEA
(PMID:15494304)
(PMID:17015724)
MGI
Ensembl
PMID:15494304 PMID:17015724 GO_REF:0000107 NCBI chr11:104,302,507...104,325,160 JBrowse link
somatic recombination of immunoglobulin gene segments term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G LOC103246803 mismatch repair endonuclease PMS2 acts_upstream_of_or_within
involved_in
ISO
IEA
(PMID:11828012) MGI
Ensembl
PMID:11828012 GO_REF:0000107 NCBI chr28:15,174,359...15,209,962
Ensembl chr28:15,172,100...15,209,852
JBrowse link
G MLH1 mutL homolog 1 involved_in
acts_upstream_of_or_within
IEA
ISO
(PMID:11828012) Ensembl
MGI
PMID:11828012 GO_REF:0000107 NCBI chr15:2,364,537...2,418,379
Ensembl chr15:2,364,738...2,418,393
JBrowse link
G MSH2 mutS homolog 2 involved_in
acts_upstream_of_or_within
IEA
ISO
(PMID:14563316), (PMID:15955838)
(PMID:11828012)
(PMID:15494304)
(PMID:14568978)
Ensembl
MGI
PMID:11828012 PMID:14563316 PMID:14568978 PMID:15494304 PMID:15955838 GO_REF:0000107 NCBI chr14:59,730,101...59,802,857
Ensembl chr14:59,729,789...59,802,819
JBrowse link
G MSH3 mutS homolog 3 acts_upstream_of_or_within
involved_in
ISO
IEA
(PMID:15238604) MGI
TreeGrafter
PMID:15238604 GO_REF:0000118 NCBI chr 4:74,811,181...75,032,067
Ensembl chr 4:74,811,198...75,032,005
JBrowse link
G MSH6 mutS homolog 6 involved_in
acts_upstream_of_or_within
IEA
ISO
(PMID:15238604) Ensembl
MGI
PMID:15238604 GO_REF:0000107 NCBI chr14:59,375,602...59,400,252
Ensembl chr14:59,375,691...59,400,174
JBrowse link
G UNG uracil DNA glycosylase acts_upstream_of_or_within
involved_in
ISO
IEA
(PMID:15494304) MGI
Ensembl
PMID:15494304 GO_REF:0000107 NCBI chr11:104,302,507...104,325,160 JBrowse link
somatic recombination of immunoglobulin genes involved in immune response term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G MLH1 mutL homolog 1 involved_in
acts_upstream_of_or_within
IEA
ISO
(PMID:12743174) Ensembl
MGI
PMID:12743174 GO_REF:0000107 NCBI chr15:2,364,537...2,418,379
Ensembl chr15:2,364,738...2,418,393
JBrowse link
G MSH2 mutS homolog 2 involved_in
acts_upstream_of_or_within
IEA
ISO
(PMID:12743174) Ensembl
TreeGrafter
MGI
PMID:12743174 GO_REF:0000107 GO_REF:0000118 NCBI chr14:59,730,101...59,802,857
Ensembl chr14:59,729,789...59,802,819
JBrowse link
spleen development term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ABL1 ABL proto-oncogene 1, non-receptor tyrosine kinase acts_upstream_of_or_within
involved_in
ISO
IEA
(PMID:2065352) MGI
Ensembl
PMID:2065352 GO_REF:0000107 NCBI chr12:7,258,932...7,435,658
Ensembl chr12:7,256,648...7,312,734
JBrowse link
G ADAM17 ADAM metallopeptidase domain 17 involved_in ISO (PMID:17371977) BHF-UCL PMID:17371977 NCBI chr14:98,092,093...98,157,657
Ensembl chr14:98,092,044...98,157,217
JBrowse link
G AHR aryl hydrocarbon receptor involved_in ISO (PMID:7732381), (PMID:8692887) DFLAT PMID:7732381 PMID:8692887 NCBI chr21:40,778,198...40,826,491
Ensembl chr21:40,778,218...40,826,478
JBrowse link
G BARX1 BARX homeobox 1 acts_upstream_of_or_within
involved_in
ISO
IEA
(PMID:17855428) MGI
Ensembl
PMID:17855428 GO_REF:0000107 NCBI chr12:104,299,516...104,307,613
Ensembl chr12:104,303,265...104,306,251
JBrowse link
G BCL2 BCL2 apoptosis regulator acts_upstream_of_or_within
involved_in
ISO
IEA
(PMID:15818405) MGI
Ensembl
PMID:15818405 GO_REF:0000107 NCBI chr18:16,440,560...16,643,187
Ensembl chr18:16,441,733...16,637,895
JBrowse link
G BCL2L11 BCL2 like 11 acts_upstream_of_or_within ISO (PMID:15818405) MGI PMID:15818405 NCBI chr14:14,178,159...14,205,337 JBrowse link
G BCL3 BCL3 transcription coactivator acts_upstream_of_or_within ISO (PMID:10586052) MGI PMID:10586052 NCBI chr 6:38,228,137...38,243,767 JBrowse link
G BCL3 BCL3 transcription coactivator involved_in IEA Ensembl GO_REF:0000107 Ensembl chr 6:38,229,459...38,244,150 JBrowse link
G CACNB4 calcium voltage-gated channel auxiliary subunit beta 4 acts_upstream_of_or_within
involved_in
ISO
IEA
(PMID:5037658) MGI
Ensembl
PMID:5037658 GO_REF:0000107 NCBI chr10:37,240,749...37,518,174
Ensembl chr10:37,246,991...37,388,059
JBrowse link
G CDH17 cadherin 17 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 8:89,101,788...89,179,353
Ensembl chr 8:89,101,744...89,179,251
JBrowse link
G CITED2 Cbp/p300 interacting transactivator with Glu/Asp rich carboxy-terminal domain 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chr13:34,009,527...34,011,924
Ensembl chr13:34,010,228...34,011,046
JBrowse link
G COA5 cytochrome c oxidase assembly factor 5 acts_upstream_of_or_within
involved_in
ISO
IEA
(PMID:36301669) MGI
Ensembl
PMID:36301669 GO_REF:0000107 NCBI chr14:2,312,808...2,322,096
Ensembl chr14:2,314,146...2,321,988
JBrowse link
G CTC1 CST telomere replication complex component 1 involved_in
acts_upstream_of_or_within
IEA
ISO
(PMID:22531781) Ensembl
MGI
PMID:22531781 GO_REF:0000107 NCBI chr16:7,594,493...7,618,202
Ensembl chr16:7,594,219...7,615,754
JBrowse link
G DICER1 dicer 1, ribonuclease III acts_upstream_of_or_within ISO (PMID:21307095) MGI PMID:21307095 NCBI chr24:72,915,550...72,986,658
Ensembl chr24:72,915,499...72,963,006
JBrowse link
G EPB42 erythrocyte membrane protein band 4.2 involved_in
acts_upstream_of_or_within
IEA
ISO
(PMID:10359562) Ensembl
MGI
PMID:10359562 GO_REF:0000107 NCBI chr26:39,770,288...39,794,252
Ensembl chr26:39,770,664...39,794,173
JBrowse link
G FADD Fas associated via death domain involved_in ISO (PMID:21876153) UniProt PMID:21876153 NCBI chr 1:4,358,314...4,361,863 JBrowse link
G FAM210B family with sequence similarity 210 member B acts_upstream_of_or_within ISO (PMID:39000360) MGI PMID:39000360 NCBI chr 2:7,753,859...7,763,450
Ensembl chr 2:7,756,240...7,763,394
JBrowse link
G FGF10 fibroblast growth factor 10 involved_in
acts_upstream_of_or_within
IEA
ISO
(PMID:15329346) Ensembl
MGI
PMID:15329346 GO_REF:0000107 NCBI chr 4:43,080,387...43,163,355
Ensembl chr 4:43,081,831...43,163,432
JBrowse link
G FLT3 fms related receptor tyrosine kinase 3 acts_upstream_of_or_within ISO (PMID:22674806) MGI PMID:22674806 NCBI chr 3:7,117,579...7,222,600
Ensembl chr 3:7,116,947...7,222,849
JBrowse link
G FLVCR1 FLVCR choline and heme transporter 1 involved_in
acts_upstream_of_or_within
IEA
ISO
(PMID:18258918) Ensembl
MGI
PMID:18258918 GO_REF:0000107 NCBI chr25:16,656,219...16,688,397
Ensembl chr25:16,652,246...16,688,376
JBrowse link
G HOXB4 homeobox B4 involved_in
acts_upstream_of_or_within
IEA
ISO
(PMID:14962901) Ensembl
MGI
PMID:14962901 GO_REF:0000107 NCBI chr16:68,988,621...68,991,574
Ensembl chr16:68,989,862...68,991,455
JBrowse link
G JARID2 jumonji and AT-rich interaction domain containing 2 involved_in
acts_upstream_of_or_within
IEA
ISO
(PMID:9376320) Ensembl
MGI
PMID:9376320 GO_REF:0000107 NCBI chr17:56,651,752...56,928,650
Ensembl chr17:56,651,596...56,928,126
JBrowse link
G KMT2A lysine methyltransferase 2A acts_upstream_of_or_within
involved_in
ISO
IEA
(PMID:22674806) MGI
Ensembl
PMID:22674806 GO_REF:0000107 NCBI chr 1:109,819,748...109,912,763
Ensembl chr 1:109,853,758...109,908,113
JBrowse link
G LIPA lipase A, lysosomal acid type involved_in
acts_upstream_of_or_within
IEA
ISO
(PMID:19179613) Ensembl
MGI
PMID:19179613 GO_REF:0000107 NCBI chr 9:82,639,220...82,677,479
Ensembl chr 9:82,638,621...82,677,488
JBrowse link
G LOC103230557 roquin-1 involved_in
acts_upstream_of_or_within
IEA
ISO
(PMID:23583643) Ensembl
MGI
PMID:23583643 GO_REF:0000107 NCBI chr25:55,167,418...55,258,964
Ensembl chr25:55,167,077...55,279,088
JBrowse link
G MYB MYB proto-oncogene, transcription factor acts_upstream_of_or_within ISO (PMID:19360001) MGI PMID:19360001 NCBI chr13:38,203,923...38,242,148
Ensembl chr13:38,203,731...38,241,864
JBrowse link
G NFKB2 nuclear factor kappa B subunit 2 acts_upstream_of_or_within
involved_in
ISO
IEA
(PMID:10586052) MGI
Ensembl
PMID:10586052 GO_REF:0000107 NCBI chr 9:95,426,193...95,434,560
Ensembl chr 9:95,427,785...95,434,570
JBrowse link
G NFKBIZ NFKB inhibitor zeta involved_in IEA Ensembl GO_REF:0000107 NCBI chr22:79,044,624...79,077,736
Ensembl chr22:79,044,619...79,055,776
JBrowse link
G NKX2-3 NK2 homeobox 3 involved_in
acts_upstream_of_or_within
IEA
ISO
(PMID:10926756)
(PMID:10207146), (PMID:10790368)
Ensembl
MGI
PMID:10207146 PMID:10790368 PMID:10926756 GO_REF:0000107 NCBI chr 9:92,590,342...92,594,749
Ensembl chr 9:92,591,375...92,594,842
JBrowse link
G NKX2-5 NK2 homeobox 5 involved_in
acts_upstream_of_or_within
IEA
ISO
(PMID:22560297) Ensembl
MGI
PMID:22560297 GO_REF:0000107 NCBI chr23:75,391,833...75,399,003
Ensembl chr23:75,391,847...75,395,205
JBrowse link
G NKX3-2 NK3 homeobox 2 involved_in
acts_upstream_of_or_within
IEA
ISO
(PMID:19208343)
(PMID:10572046)
(PMID:10449756), (PMID:15329346)
Ensembl
MGI
PMID:10449756 PMID:10572046 PMID:15329346 PMID:19208343 GO_REF:0000107 NCBI chr27:36,641,837...36,647,917
Ensembl chr27:36,641,932...36,644,353
JBrowse link
G NR1H3 nuclear receptor subfamily 1 group H member 3 ISO RGD PMID:17341476 RGD:401827282 NCBI chr 1:18,041,495...18,061,196
Ensembl chr 1:18,041,830...18,051,501
JBrowse link
G ONECUT1 one cut homeobox 1 acts_upstream_of_or_within ISO (PMID:12874218) MGI PMID:12874218 NCBI chr26:30,609,392...30,645,996 JBrowse link
G ONECUT1 one cut homeobox 1 involved_in IEA Ensembl GO_REF:0000107 Ensembl chr26:30,610,161...30,643,380 JBrowse link
G PBX1 PBX homeobox 1 involved_in
acts_upstream_of_or_within
IEA
ISO
(PMID:22560297)
(PMID:15944191)
Ensembl
MGI
PMID:15944191 PMID:22560297 GO_REF:0000107 NCBI chr25:63,990,553...64,317,901
Ensembl chr25:63,989,612...64,084,673
JBrowse link
G PCID2 PCI domain containing 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 3:91,163,158...91,212,450
Ensembl chr 3:91,177,463...91,211,735
JBrowse link
G PITX2 paired like homeodomain 2 involved_in ISO (PMID:15475956) BHF-UCL PMID:15475956 NCBI chr 7:58,501,669...58,526,413
Ensembl chr 7:58,501,559...58,507,318
JBrowse link
G PKN1 protein kinase N1 involved_in
acts_upstream_of_or_within
IEA
ISO
(PMID:23223530) Ensembl
MGI
PMID:23223530 GO_REF:0000107 NCBI chr 6:13,088,060...13,130,848
Ensembl chr 6:13,082,132...13,130,897
JBrowse link
G POLB DNA polymerase beta acts_upstream_of_or_within
involved_in
ISO
IEA
(PMID:24388753) MGI
Ensembl
PMID:24388753 GO_REF:0000107 NCBI chr 8:40,332,165...40,368,065
Ensembl chr 8:40,332,208...40,372,582
JBrowse link
G PPP2R3C protein phosphatase 2 regulatory subunit B''gamma involved_in
acts_upstream_of_or_within
IEA
ISO
(PMID:16129705) Ensembl
MGI
PMID:16129705 GO_REF:0000107 NCBI chr24:11,901,522...11,935,764
Ensembl chr24:11,900,604...11,935,560
JBrowse link
G PRKDC protein kinase, DNA-activated, catalytic subunit ISO RGD PMID:22981234 RGD:8696027 NCBI chr 8:43,915,226...44,119,547
Ensembl chr 8:43,914,636...44,119,541
JBrowse link
G PSMB9 proteasome 20S subunit beta 9 ISO RGD PMID:24707720 RGD:9854625 NCBI chr17:39,246,356...39,251,852
Ensembl chr17:39,245,854...39,251,842
JBrowse link
G RBM15 RNA binding motif protein 15 acts_upstream_of_or_within
involved_in
ISO
IEA
(PMID:18981216) MGI
Ensembl
PMID:18981216 GO_REF:0000107 NCBI chr20:23,191,916...23,200,626
Ensembl chr20:23,193,349...23,199,524
JBrowse link
G RC3H2 ring finger and CCCH-type domains 2 involved_in
acts_upstream_of_or_within
IEA
ISO
(PMID:23583643) Ensembl
MGI
PMID:23583643 GO_REF:0000107 NCBI chr12:15,230,206...15,283,253
Ensembl chr12:15,238,124...15,280,689
JBrowse link
G RCBTB2 RCC1 and BTB domain containing protein 2 acts_upstream_of_or_within ISO (PMID:26291700) MGI PMID:26291700 NCBI chr 3:26,401,787...26,447,315
Ensembl chr 3:26,401,786...26,437,619
JBrowse link
G RIPK3 receptor interacting serine/threonine kinase 3 involved_in IEA Ensembl GO_REF:0000107 NCBI chr24:1,318,265...1,322,610
Ensembl chr24:1,318,216...1,322,462
JBrowse link
G SAMD9L sterile alpha motif domain containing 9 like acts_upstream_of_or_within ISO (PMID:24029230) MGI PMID:24029230 NCBI chr21:55,865,869...55,883,593
Ensembl chr21:55,878,526...55,883,280
JBrowse link
G SCO1 SCO1, cytochrome c oxidase assembly protein acts_upstream_of_or_within ISO (PMID:36301669) MGI PMID:36301669 NCBI chr16:10,021,480...10,036,920 JBrowse link
G SLC40A1 solute carrier family 40 member 1 acts_upstream_of_or_within ISO (PMID:15342464) MGI PMID:15342464 NCBI chr10:75,076,286...75,097,742
Ensembl chr10:75,075,971...75,096,271
JBrowse link
G TCF21 transcription factor 21 involved_in IEA Ensembl GO_REF:0000107 NCBI chr13:39,607,179...39,610,336
Ensembl chr13:39,607,182...39,610,388
JBrowse link
G TET2 tet methylcytosine dioxygenase 2 acts_upstream_of_or_within ISO (PMID:21803851) MGI PMID:21803851 NCBI chr 7:53,193,824...53,326,813
Ensembl chr 7:53,193,941...53,326,942
JBrowse link
G TLX1 T cell leukemia homeobox 1 acts_upstream_of_or_within ISO (PMID:11356032)
(PMID:15944191)
MGI PMID:11356032 PMID:15944191 NCBI chr 9:94,147,410...94,155,388
Ensembl chr 9:94,149,126...94,154,520
JBrowse link
G TRAF3IP2 TRAF3 interacting protein 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chr13:62,272,893...62,320,096
Ensembl chr13:62,285,589...62,324,312
JBrowse link
spleen trabecula formation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G SLC40A1 solute carrier family 40 member 1 acts_upstream_of_or_within ISO (PMID:15342464) MGI PMID:15342464 NCBI chr10:75,076,286...75,097,742
Ensembl chr10:75,075,971...75,096,271
JBrowse link
T cell anergy term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G CBLB Cbl proto-oncogene B involved_in
acts_upstream_of
IEA
ISO
(PMID:14973438) Ensembl
MGI
PMID:14973438 GO_REF:0000107 NCBI chr22:74,961,831...75,181,307
Ensembl chr22:74,961,859...75,178,548
JBrowse link
G CD3E CD3e molecule acts_upstream_of
involved_in
ISO
IEA
(PMID:14973438) MGI
Ensembl
PMID:14973438 GO_REF:0000107 NCBI chr 1:109,681,142...109,692,835
Ensembl chr 1:109,681,065...109,692,839
JBrowse link
G FOXP3 forkhead box P3 acts_upstream_of ISO (PMID:16945588) MGI PMID:16945588 NCBI chr  X:46,349,890...46,365,133 JBrowse link
G FOXP3 forkhead box P3 involved_in IEA Ensembl GO_REF:0000107 Ensembl chr  X:46,346,754...46,356,928 JBrowse link
G ITCH itchy E3 ubiquitin protein ligase acts_upstream_of
involved_in
ISO
IEA
(PMID:14973438) MGI
Ensembl
PMID:14973438 GO_REF:0000107 NCBI chr 2:38,671,170...38,808,621
Ensembl chr 2:38,701,396...38,805,005
JBrowse link
T cell receptor V(D)J recombination term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G BCL11B BCL11 transcription factor B acts_upstream_of_or_within
involved_in
ISO
IEA
(PMID:12717433) MGI
Ensembl
PMID:12717433 GO_REF:0000107 NCBI chr24:77,122,591...77,222,562
Ensembl chr24:77,122,689...77,221,454
JBrowse link
G LEF1 lymphoid enhancer binding factor 1 acts_upstream_of_or_within
involved_in
ISO
IEA
(PMID:9462507) MGI
Ensembl
PMID:9462507 GO_REF:0000107 NCBI chr 7:55,974,770...56,096,214
Ensembl chr 7:55,990,621...56,094,110
JBrowse link
G LIG4 DNA ligase 4 acts_upstream_of_or_within
involved_in
ISO
IEA
(PMID:10911993) MGI
Ensembl
PMID:10911993 GO_REF:0000107 NCBI chr 3:86,576,200...86,587,097
Ensembl chr 3:86,577,304...86,580,039
JBrowse link
G PRKDC protein kinase, DNA-activated, catalytic subunit involved_in
acts_upstream_of_or_within
IEA
ISO
(PMID:9768755) Ensembl
MGI
PMID:9768755 GO_REF:0000107 NCBI chr 8:43,915,226...44,119,547
Ensembl chr 8:43,914,636...44,119,541
JBrowse link
G TCF7 transcription factor 7 acts_upstream_of_or_within ISO (PMID:9462507) MGI PMID:9462507 NCBI chr23:36,919,648...36,953,088
Ensembl chr23:36,919,745...36,951,192
JBrowse link
T cell tolerance induction term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G FOXP3 forkhead box P3 acts_upstream_of ISO (PMID:16945588) MGI PMID:16945588 NCBI chr  X:46,349,890...46,365,133 JBrowse link
G FOXP3 forkhead box P3 involved_in IEA Ensembl GO_REF:0000107 Ensembl chr  X:46,346,754...46,356,928 JBrowse link
G ICOS inducible T cell costimulator involved_in ISO
IEA
RGD
TreeGrafter
PMID:16220623 GO_REF:0000118 RGD:1624271 NCBI chr10:89,706,755...89,732,600
Ensembl chr10:89,726,489...89,732,944
JBrowse link
thymus development term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ABL1 ABL proto-oncogene 1, non-receptor tyrosine kinase acts_upstream_of_or_within
involved_in
ISO
IEA
(PMID:2065352) MGI
Ensembl
PMID:2065352 GO_REF:0000107 NCBI chr12:7,258,932...7,435,658
Ensembl chr12:7,256,648...7,312,734
JBrowse link
G ADRM1 ADRM1 26S proteasome ubiquitin receptor involved_in ISO (PMID:21048919) BHF-UCL PMID:21048919 NCBI chr 2:1,930,281...1,936,323
Ensembl chr 2:1,925,382...1,936,393
JBrowse link
G APC APC regulator of WNT signaling pathway acts_upstream_of_or_within ISO (PMID:17002498)
(PMID:16025118)
MGI PMID:16025118 PMID:17002498 NCBI chr23:15,992,437...16,135,117
Ensembl chr23:16,042,287...16,137,067
JBrowse link
G ASXL1 ASXL transcriptional regulator 1 acts_upstream_of_or_within
involved_in
ISO
IEA
(PMID:19861679) MGI
Ensembl
PMID:19861679 GO_REF:0000107 NCBI chr 2:36,735,449...36,810,447
Ensembl chr 2:36,735,830...36,812,387
JBrowse link
G ATM ATM serine/threonine kinase acts_upstream_of_or_within
involved_in
ISO
IEA
(PMID:8843194) MGI
Ensembl
PMID:8843194 GO_REF:0000107 NCBI chr 1:99,653,208...99,786,889
Ensembl chr 1:99,653,139...99,791,520
JBrowse link
G BCL11B BCL11 transcription factor B acts_upstream_of_or_within
involved_in
ISO
IEA
(PMID:12717433) MGI
Ensembl
PMID:12717433 GO_REF:0000107 NCBI chr24:77,122,591...77,222,562
Ensembl chr24:77,122,689...77,221,454
JBrowse link
G BCL2 BCL2 apoptosis regulator acts_upstream_of_or_within
involved_in
ISO
IEA
(PMID:15818405)
(PMID:9241272)
MGI
Ensembl
PMID:9241272 PMID:15818405 GO_REF:0000107 NCBI chr18:16,440,560...16,643,187
Ensembl chr18:16,441,733...16,637,895
JBrowse link
G BCL2L11 BCL2 like 11 acts_upstream_of_or_within ISO (PMID:15818405) MGI PMID:15818405 NCBI chr14:14,178,159...14,205,337 JBrowse link
G BRAF B-Raf proto-oncogene, serine/threonine kinase acts_upstream_of_or_within ISO (PMID:18952847) MGI PMID:18952847 NCBI chr21:109,495,525...109,690,261 JBrowse link
G BRAF B-Raf proto-oncogene, serine/threonine kinase involved_in IEA Ensembl GO_REF:0000107 Ensembl chr21:109,545,491...109,690,195 JBrowse link
G CACNB4 calcium voltage-gated channel auxiliary subunit beta 4 acts_upstream_of_or_within
involved_in
ISO
IEA
(PMID:5037658) MGI
Ensembl
PMID:5037658 GO_REF:0000107 NCBI chr10:37,240,749...37,518,174
Ensembl chr10:37,246,991...37,388,059
JBrowse link
G CARMIL2 capping protein regulator and myosin 1 linker 2 acts_upstream_of_or_within ISO (PMID:23793062) MGI PMID:23793062 NCBI chr 5:59,787,069...59,801,615
Ensembl chr 5:59,787,120...59,801,122
JBrowse link
G CCNB2 cyclin B2 acts_upstream_of_or_within
involved_in
ISO
IEA
(PMID:9539739) MGI
Ensembl
PMID:9539739 GO_REF:0000107 NCBI chr26:24,389,654...24,408,976
Ensembl chr26:24,389,642...24,409,346
JBrowse link
G CITED2 Cbp/p300 interacting transactivator with Glu/Asp rich carboxy-terminal domain 2 involved_in
acts_upstream_of_or_within
IEA
ISO
(PMID:20549734) Ensembl
MGI
PMID:20549734 GO_REF:0000107 NCBI chr13:34,009,527...34,011,924
Ensembl chr13:34,010,228...34,011,046
JBrowse link
G COA5 cytochrome c oxidase assembly factor 5 acts_upstream_of_or_within
involved_in
ISO
IEA
(PMID:36301669) MGI
Ensembl
PMID:36301669 GO_REF:0000107 NCBI chr14:2,312,808...2,322,096
Ensembl chr14:2,314,146...2,321,988
JBrowse link
G CTC1 CST telomere replication complex component 1 involved_in
acts_upstream_of_or_within
IEA
ISO
(PMID:22531781) Ensembl
MGI
PMID:22531781 GO_REF:0000107 NCBI chr16:7,594,493...7,618,202
Ensembl chr16:7,594,219...7,615,754
JBrowse link
G CTNNB1 catenin beta 1 involved_in
acts_upstream_of_or_within
IEA
ISO
(PMID:16025118) Ensembl
MGI
PMID:16025118 GO_REF:0000107 NCBI chr22:2,679,488...2,725,034
Ensembl chr22:2,684,022...2,723,949
JBrowse link
G EPHB3 EPH receptor B3 involved_in IEA Ensembl GO_REF:0000107 NCBI chr15:4,831,980...4,852,586
Ensembl chr15:4,832,750...4,852,152
JBrowse link
G FADD Fas associated via death domain involved_in ISO (PMID:21876153) UniProt PMID:21876153 NCBI chr 1:4,358,314...4,361,863 JBrowse link
G FGF10 fibroblast growth factor 10 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 4:43,080,387...43,163,355
Ensembl chr 4:43,081,831...43,163,432
JBrowse link
G FGF3 fibroblast growth factor 3 acts_upstream_of_or_within ISO (PMID:17000704) MGI PMID:17000704 NCBI chr 1:4,746,195...4,755,654
Ensembl chr 1:4,746,696...4,754,924
JBrowse link
G FOXE1 forkhead box E1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr12:41,555,901...41,559,914
Ensembl chr12:41,557,568...41,558,686
JBrowse link
G FOXI3 forkhead box I3 involved_in ISO (PMID:31412026) UniProt PMID:31412026 NCBI chr14:18,310,904...18,317,115
Ensembl chr14:18,312,661...18,317,033
JBrowse link
G FOXN1 forkhead box N1 acts_upstream_of_or_within
involved_in
ISO
IEA
(PMID:22072979) RGD
MGI
Ensembl
PMID:8790387 PMID:22072979 GO_REF:0000107 RGD:1300512 NCBI chr16:22,291,597...22,306,977
Ensembl chr16:22,292,330...22,305,968
JBrowse link
G GATA3 GATA binding protein 3 acts_upstream_of_or_within
involved_in
ISO
IEA
(PMID:17082577) MGI
Ensembl
PMID:17082577 GO_REF:0000107 NCBI chr 9:8,101,404...8,122,762
Ensembl chr 9:8,101,432...8,123,064
JBrowse link
G HAND2 heart and neural crest derivatives expressed 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 7:119,635,697...119,639,415
Ensembl chr 7:119,634,741...119,638,546
JBrowse link
G HES1 hes family bHLH transcription factor 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr15:88,220,093...88,222,563
Ensembl chr15:88,220,083...88,223,243
JBrowse link
G HNRNPK heterogeneous nuclear ribonucleoprotein K ISO RGD PMID:16488668 RGD:10002779 NCBI chr12:94,768,403...94,789,957
Ensembl chr12:94,768,480...94,789,743
JBrowse link
G HOXA3 homeobox A3 involved_in
acts_upstream_of_or_within
IEA
ISO
(PMID:7635047)
(PMID:11476574)
(PMID:9520319)
Ensembl
MGI
PMID:7635047 PMID:9520319 PMID:11476574 GO_REF:0000107 NCBI chr21:31,241,900...31,261,900
Ensembl chr21:31,258,142...31,261,952
JBrowse link
G IKZF1 IKAROS family zinc finger 1 acts_upstream_of_or_within ISO (PMID:7923373) MGI PMID:7923373 NCBI chr21:8,398,902...8,500,431
Ensembl chr21:8,402,719...8,484,723
JBrowse link
G JARID2 jumonji and AT-rich interaction domain containing 2 involved_in
acts_upstream_of_or_within
IEA
ISO
(PMID:9376320) Ensembl
MGI
PMID:9376320 GO_REF:0000107 NCBI chr17:56,651,752...56,928,650
Ensembl chr17:56,651,596...56,928,126
JBrowse link
G LMO4 LIM domain only 4 involved_in
acts_upstream_of_or_within
IEA
ISO
(PMID:20549734) Ensembl
MGI
PMID:20549734 GO_REF:0000107 NCBI chr20:46,105,755...46,126,291
Ensembl chr20:46,105,699...46,126,399
JBrowse link
G LOC103222955 uncharacterized LOC103222955 involved_in
acts_upstream_of_or_within
IEA
ISO
(PMID:16399080) Ensembl
MGI
PMID:16399080 GO_REF:0000107 NCBI chr19:4,855,633...4,889,674
Ensembl chr19:4,855,611...4,890,302
JBrowse link
G MAD1L1 mitotic arrest deficient 1 like 1 involved_in
acts_upstream_of_or_within
IEA
ISO
(PMID:11313860) Ensembl
MGI
PMID:11313860 GO_REF:0000107 NCBI chr28:19,358,942...19,768,079
Ensembl chr28:19,359,233...19,768,078
JBrowse link
G MAFB MAF bZIP transcription factor B involved_in
acts_upstream_of_or_within
IEA
ISO
(PMID:19164599) Ensembl
MGI
PMID:19164599 GO_REF:0000107 NCBI chr 2:23,092,547...23,097,721
Ensembl chr 2:23,094,713...23,095,684
JBrowse link
G MAP2K1 mitogen-activated protein kinase kinase 1 involved_in
acts_upstream_of_or_within
IEA
ISO
(PMID:18952847) Ensembl
MGI
PMID:18952847 GO_REF:0000107 NCBI chr26:17,059,122...17,168,787
Ensembl chr26:17,060,054...17,168,782
JBrowse link
G MAP2K2 mitogen-activated protein kinase kinase 2 involved_in
acts_upstream_of_or_within
IEA
ISO
(PMID:18952847) Ensembl
MGI
PMID:18952847 GO_REF:0000107 NCBI chr 6:3,848,441...3,881,367
Ensembl chr 6:3,848,401...3,881,412
JBrowse link
G MAPK1 mitogen-activated protein kinase 1 involved_in
acts_upstream_of_or_within
IEA
ISO
(PMID:18952847) Ensembl
MGI
PMID:18952847 GO_REF:0000107 NCBI chr19:4,246,144...4,352,648
Ensembl chr19:4,246,122...4,353,325
JBrowse link
G MAPK3 mitogen-activated protein kinase 3 involved_in
acts_upstream_of_or_within
IEA
ISO
(PMID:18952847) Ensembl
MGI
PMID:18952847 GO_REF:0000107 NCBI chr 5:26,536,471...26,545,666
Ensembl chr 5:26,536,532...26,546,461
JBrowse link
G MYB MYB proto-oncogene, transcription factor acts_upstream_of_or_within ISO (PMID:17927961) MGI PMID:17927961 NCBI chr13:38,203,923...38,242,148
Ensembl chr13:38,203,731...38,241,864
JBrowse link
G NFATC3 nuclear factor of activated T cells 3 acts_upstream_of_or_within ISO (PMID:9768749) MGI PMID:9768749 NCBI chr 5:59,193,139...59,346,361 JBrowse link
G NR1H3 nuclear receptor subfamily 1 group H member 3 ISO RGD PMID:17341476 RGD:401827282 NCBI chr 1:18,041,495...18,061,196
Ensembl chr 1:18,041,830...18,051,501
JBrowse link
G PAX1 paired box 1 involved_in
acts_upstream_of_or_within
IEA
ISO
(PMID:11476574) Ensembl
MGI
PMID:11476574 GO_REF:0000107 NCBI chr 2:50,706,029...50,722,634 JBrowse link
G PBX1 PBX homeobox 1 involved_in
acts_upstream_of_or_within
IEA
ISO
(PMID:15581866) Ensembl
MGI
PMID:15581866 GO_REF:0000107 NCBI chr25:63,990,553...64,317,901
Ensembl chr25:63,989,612...64,084,673
JBrowse link
G PRDX2 peroxiredoxin 2 acts_upstream_of_or_within
involved_in
ISO
IEA
(PMID:15259009) MGI
Ensembl
PMID:15259009 GO_REF:0000107 NCBI chr 6:11,484,452...11,489,067
Ensembl chr 6:11,481,784...11,489,051
JBrowse link
G PRKDC protein kinase, DNA-activated, catalytic subunit ISO RGD PMID:22981234 RGD:8696027 NCBI chr 8:43,915,226...44,119,547
Ensembl chr 8:43,914,636...44,119,541
JBrowse link
G PSEN1 presenilin 1 involved_in
acts_upstream_of_or_within
IEA
ISO
(PMID:17698590) Ensembl
MGI
PMID:17698590 GO_REF:0000107 NCBI chr24:50,394,310...50,476,521
Ensembl chr24:50,405,590...50,472,132
JBrowse link
G PSEN2 presenilin 2 acts_upstream_of_or_within ISO (PMID:17698590) MGI PMID:17698590 NCBI chr25:2,862,354...2,888,735
Ensembl chr25:2,862,251...2,877,386
JBrowse link
G PSMB9 proteasome 20S subunit beta 9 ISO RGD PMID:18457575 RGD:9850287 NCBI chr17:39,246,356...39,251,852
Ensembl chr17:39,245,854...39,251,842
JBrowse link
G RAF1 Raf-1 proto-oncogene, serine/threonine kinase acts_upstream_of_or_within
involved_in
ISO
IEA
(PMID:18952847) MGI
Ensembl
PMID:18952847 GO_REF:0000107 NCBI chr22:48,560,270...48,643,537
Ensembl chr22:48,561,161...48,618,020
JBrowse link
G RAG1 recombination activating 1 involved_in
acts_upstream_of_or_within
IEA
ISO
(PMID:18684012) Ensembl
MGI
PMID:18684012 GO_REF:0000107 NCBI chr 1:28,667,996...28,701,002 JBrowse link
G RIPK3 receptor interacting serine/threonine kinase 3 involved_in IEA Ensembl GO_REF:0000107 NCBI chr24:1,318,265...1,322,610
Ensembl chr24:1,318,216...1,322,462
JBrowse link
G SCO1 SCO1, cytochrome c oxidase assembly protein acts_upstream_of_or_within ISO (PMID:36301669) MGI PMID:36301669 NCBI chr16:10,021,480...10,036,920 JBrowse link
G SHH sonic hedgehog signaling molecule involved_in IEA Ensembl GO_REF:0000107 NCBI chr21:123,929,937...123,942,451
Ensembl chr21:123,932,900...123,942,395
JBrowse link
G SIX1 SIX homeobox 1 involved_in
acts_upstream_of_or_within
IEA
ISO
(PMID:16530750) Ensembl
MGI
PMID:16530750 GO_REF:0000107 NCBI chr24:37,840,399...37,855,801
Ensembl chr24:37,840,309...37,845,192
JBrowse link
G SIX4 SIX homeobox 4 involved_in
acts_upstream_of_or_within
IEA
ISO
(PMID:16530750) Ensembl
MGI
PMID:16530750 GO_REF:0000107 NCBI chr24:37,899,463...37,911,875
Ensembl chr24:37,900,909...37,911,612
JBrowse link
G SLC46A2 solute carrier family 46 member 2 acts_upstream_of_or_within
involved_in
ISO
IEA
(PMID:18684012) MGI
Ensembl
PMID:18684012 GO_REF:0000107 NCBI chr12:26,631,295...26,646,112
Ensembl chr12:26,633,493...26,646,038
JBrowse link
G SRF serum response factor acts_upstream_of_or_within
involved_in
ISO
IEA
(PMID:18952847) MGI
Ensembl
PMID:18952847 GO_REF:0000107 NCBI chr17:28,983,161...28,993,465
Ensembl chr17:28,983,002...28,992,995
JBrowse link
G TBX1 T-box transcription factor 1 involved_in
acts_upstream_of_or_within
ISO (PMID:14585638)
(PMID:31412026)
(PMID:17916582)
UniProt
MGI
PMID:14585638 PMID:17916582 PMID:31412026 NCBI chr19:5,980,114...5,986,313
Ensembl chr19:5,980,587...5,987,244
JBrowse link
G TGFBR1 transforming growth factor beta receptor 1 acts_upstream_of_or_within
involved_in
ISO
IEA
(PMID:17078885) MGI
Ensembl
PMID:17078885 GO_REF:0000107 NCBI chr12:40,272,507...40,321,740
Ensembl chr12:40,276,916...40,297,372
JBrowse link
G TYR tyrosinase acts_upstream_of_or_within ISO (PMID:10890980) MGI PMID:10890980 NCBI chr 1:80,330,051...80,444,646 JBrowse link
G TYR tyrosinase involved_in IEA Ensembl GO_REF:0000107 Ensembl chr 1:80,332,469...80,381,547 JBrowse link
G ZBTB1 zinc finger and BTB domain containing 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr24:41,712,721...41,738,853
Ensembl chr24:41,712,114...41,740,654
JBrowse link
G ZMPSTE24 zinc metallopeptidase STE24 involved_in
acts_upstream_of_or_within
IEA
ISO
(PMID:11923874) Ensembl
MGI
PMID:11923874 GO_REF:0000107 NCBI chr20:92,605,495...92,648,110
Ensembl chr20:92,605,309...92,648,114
JBrowse link
thymus epithelium morphogenesis term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G AIRE autoimmune regulator involved_in IEA Ensembl GO_REF:0000107 NCBI chr 2:88,019,122...88,031,998
Ensembl chr 2:88,019,522...88,031,801
JBrowse link
G FOXN1 forkhead box N1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr16:22,291,597...22,306,977
Ensembl chr16:22,292,330...22,305,968
JBrowse link
tolerance induction term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G C3 complement C3 ISO RGD PMID:16555329 RGD:5129541 NCBI chr 6:6,250,422...6,289,264 JBrowse link
G CCR4 C-C motif chemokine receptor 4 acts_upstream_of_or_within
involved_in
ISO
IEA
(PMID:15809349) MGI
Ensembl
PMID:15809349 GO_REF:0000107 NCBI chr15:77,435,195...77,439,164
Ensembl chr15:77,437,265...77,438,347
JBrowse link
G FOXP3 forkhead box P3 acts_upstream_of_or_within ISO (PMID:15809349) MGI PMID:15809349 NCBI chr  X:46,349,890...46,365,133 JBrowse link
G FOXP3 forkhead box P3 involved_in IEA Ensembl GO_REF:0000107 Ensembl chr  X:46,346,754...46,356,928 JBrowse link
G LILRB4 leukocyte immunoglobulin like receptor B4 involved_in ISO (PMID:18420485), (PMID:20935202) ARUK-UCL PMID:18420485 PMID:20935202 NCBI chr 6:47,299,764...47,333,711 JBrowse link
tolerance induction to lipopolysaccharide term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ACOD1 aconitate decarboxylase 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 3:56,037,628...56,048,509
Ensembl chr 3:56,042,149...56,047,680
JBrowse link
G TNFAIP3 TNF alpha induced protein 3 involved_in IEA Ensembl GO_REF:0000107 NCBI chr13:35,537,103...35,553,396
Ensembl chr13:35,537,102...35,549,197
JBrowse link
tolerance induction to nonself antigen term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G C3AR1 complement C3a receptor 1 ISO RGD PMID:12514742 RGD:5129547 NCBI chr11:8,128,192...8,135,517
Ensembl chr11:8,128,620...8,130,062
JBrowse link
tolerance induction to self antigen term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G FOXP3 forkhead box P3 acts_upstream_of_or_within ISO (PMID:15780990) MGI PMID:15780990 NCBI chr  X:46,349,890...46,365,133 JBrowse link
G FOXP3 forkhead box P3 involved_in IEA Ensembl GO_REF:0000107 Ensembl chr  X:46,346,754...46,356,928 JBrowse link
G LYN LYN proto-oncogene, Src family tyrosine kinase involved_in IEA Ensembl GO_REF:0000107 NCBI chr 8:51,919,656...52,057,376
Ensembl chr 8:51,919,808...52,057,959
JBrowse link
G TGFB1 transforming growth factor beta 1 involved_in
acts_upstream_of_or_within
IEA
ISO
(PMID:17481928) Ensembl
MGI
PMID:17481928 GO_REF:0000107 NCBI chr 6:35,651,583...35,674,387
Ensembl chr 6:35,648,677...35,674,365
JBrowse link
G XKR8 XK related 8 involved_in
acts_upstream_of_or_within
IEA
ISO
(PMID:29440417) Ensembl
MGI
PMID:29440417 GO_REF:0000107 NCBI chr20:104,830,967...104,851,913
Ensembl chr20:104,842,157...104,851,280
JBrowse link
V(D)J recombination term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ATM ATM serine/threonine kinase acts_upstream_of_or_within
involved_in
ISO
IEA
(PMID:23836881) MGI
Ensembl
PMID:23836881 GO_REF:0000107 NCBI chr 1:99,653,208...99,786,889
Ensembl chr 1:99,653,139...99,791,520
JBrowse link
G DCAF1 DDB1 and CUL4 associated factor 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr22:12,736,784...12,843,762
Ensembl chr22:12,739,665...12,823,363
JBrowse link
G DCLRE1C DNA cross-link repair 1C involved_in
acts_upstream_of_or_within
IEA
ISO
(PMID:23836881) Ensembl
MGI
PMID:23836881 GO_REF:0000107 NCBI chr 9:14,929,221...14,974,791
Ensembl chr 9:14,929,317...14,965,443
JBrowse link
G HMGB1 high mobility group box 1 involved_in ISO (PMID:9166431) UniProt PMID:9166431 NCBI chr 3:9,353,333...9,357,765 JBrowse link
G LIG1 DNA ligase 1 NOT|involved_in ISO (PMID:9809069) UniProt PMID:9809069 NCBI chr 6:41,354,701...41,405,417
Ensembl chr 6:41,351,389...41,403,421
JBrowse link
G LIG3 DNA ligase 3 NOT|involved_in ISO (PMID:9809069) UniProt PMID:9809069 NCBI chr16:28,487,953...28,511,945
Ensembl chr16:28,490,434...28,511,130
JBrowse link
G LIG4 DNA ligase 4 acts_upstream_of_or_within
involved_in
ISO
IEA
(PMID:10716994)
(PMID:15194694)
MGI
Ensembl
PMID:10716994 PMID:15194694 GO_REF:0000107 NCBI chr 3:86,576,200...86,587,097
Ensembl chr 3:86,577,304...86,580,039
JBrowse link
G PRKDC protein kinase, DNA-activated, catalytic subunit involved_in
acts_upstream_of_or_within
IEA
ISO
(PMID:23836881) Ensembl
MGI
PMID:23836881 GO_REF:0000107 NCBI chr 8:43,915,226...44,119,547
Ensembl chr 8:43,914,636...44,119,541
JBrowse link
G RAG1 recombination activating 1 involved_in
acts_upstream_of_or_within
IEA
ISO
(PMID:2360047) Ensembl
TreeGrafter
MGI
UniProt
InterPro
PMID:2360047 GO_REF:0000002 GO_REF:0000104 GO_REF:0000107 GO_REF:0000118 NCBI chr 1:28,667,996...28,701,002 JBrowse link
G RAG2 recombination activating 2 acts_upstream_of_or_within
involved_in
ISO
IEA
(PMID:2360047) MGI
Ensembl
TreeGrafter
PMID:2360047 GO_REF:0000107 GO_REF:0000118 NCBI chr 1:28,645,175...28,653,823
Ensembl chr 1:28,649,930...28,651,513
JBrowse link
G XRCC4 X-ray repair cross complementing 4 acts_upstream_of_or_within ISO (PMID:10716994) MGI PMID:10716994 NCBI chr 4:77,182,569...77,468,786
Ensembl chr 4:77,182,793...77,468,775
JBrowse link
G XRCC6 X-ray repair cross complementing 6 acts_upstream_of_or_within ISO (PMID:10716994) MGI PMID:10716994 NCBI chr19:24,160,459...24,204,237
Ensembl chr19:24,160,483...24,206,320
JBrowse link

Term paths to the root
Path 1
Term Annotations click to browse term
  biological_process 19803
    immune system process 2668
      immune system development 241
        hematopoietic or lymphoid organ development + 131
        somatic diversification of immune receptors + 88
        tolerance induction + 33
Path 2
Term Annotations click to browse term
  biological_process 19803
    developmental process 6826
      anatomical structure development 6405
        multicellular organism development 5154
          system development 4465
            immune system development 241
              hematopoietic or lymphoid organ development + 131
              somatic diversification of immune receptors + 88
              tolerance induction + 33
paths to the root