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ONTOLOGY REPORT - ANNOTATIONS


Term:immune system development
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Accession:GO:0002520 term browser browse the term
Definition:The process whose specific outcome is the progression of an organismal system whose objective is to provide calibrated responses by an organism to a potential internal or invasive threat, over time, from its formation to the mature structure. A system is a regularly interacting or interdependent group of organs or tissues that work together to carry out a given biological process.



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immune system development term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G BCL2 BCL2 apoptosis regulator involved_in
acts_upstream_of_or_within
IEA
ISO
(PMID:8372353)
(PMID:7812968)
Ensembl
MGI
PMID:7812968 PMID:8372353 GO_REF:0000107 NCBI chr 1:13,733,849...13,900,653
Ensembl chr 1:13,731,406...13,900,658
JBrowse link
G CACNA1C calcium voltage-gated channel subunit alpha1 C involved_in ISO (PMID:15454078) BHF-UCL PMID:15454078 NCBI chr27:44,007,363...44,748,251
Ensembl chr27:44,008,020...44,746,429
JBrowse link
G GATA3 GATA binding protein 3 involved_in IBA GO_Central GO_REF:0000033 NCBI chr 2:28,068,143...28,098,445
Ensembl chr 2:28,069,051...28,087,760
JBrowse link
G RO60 Ro60, Y RNA binding protein involved_in
acts_upstream_of_or_within
IEA
ISO
(PMID:12788971) Ensembl
MGI
PMID:12788971 GO_REF:0000107 NCBI chr38:5,975,824...6,004,327
Ensembl chr38:5,975,935...5,997,945
JBrowse link
G SMAD3 SMAD family member 3 involved_in
acts_upstream_of_or_within
IEA
ISO
(PMID:15183723) Ensembl
MGI
PMID:15183723 GO_REF:0000107 NCBI chr30:31,246,313...31,360,098
Ensembl chr30:31,245,657...31,363,337
JBrowse link
bone marrow development term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ASXL1 ASXL transcriptional regulator 1 involved_in
acts_upstream_of_or_within
IEA
ISO
(PMID:19861679) Ensembl
MGI
PMID:19861679 GO_REF:0000107 NCBI chr24:21,725,126...21,804,745
Ensembl chr24:21,661,059...21,802,815
JBrowse link
G CTC1 CST telomere replication complex component 1 involved_in
acts_upstream_of_or_within
IEA
ISO
(PMID:22531781) Ensembl
MGI
PMID:22531781 GO_REF:0000107 NCBI chr 5:33,033,474...33,055,004
Ensembl chr 5:33,033,596...33,055,142
JBrowse link
G FANCB FA complementation group B acts_upstream_of_or_within ISO (PMID:26658157) MGI PMID:26658157 NCBI chr  X:10,690,826...11,140,838
Ensembl chr  X:11,095,200...11,141,029
JBrowse link
G HOXB4 homeobox B4 involved_in
acts_upstream_of_or_within
IEA
ISO
(PMID:14962901) Ensembl
MGI
PMID:14962901 GO_REF:0000107 NCBI chr 9:24,837,572...24,848,600
Ensembl chr 9:24,837,914...24,840,648
JBrowse link
G LIPA lipase A, lysosomal acid type acts_upstream_of_or_within ISO (PMID:20348241) MGI PMID:20348241 NCBI chr26:38,892,771...38,918,441
Ensembl chr26:38,893,337...38,918,436
JBrowse link
G LRP5 LDL receptor related protein 5 involved_in IEA Ensembl GO_REF:0000107 NCBI chr18:49,439,494...49,555,375
Ensembl chr18:49,439,483...49,516,396
JBrowse link
G LRRC17 leucine rich repeat containing 17 involved_in IEA Ensembl GO_REF:0000107 NCBI chr18:17,103,834...17,132,653
Ensembl chr18:17,104,184...17,118,012
JBrowse link
G MIR188 microRNA mir-188 acts_upstream_of_or_within ISO (PMID:25751060) MGI PMID:25751060 NCBI chr  X:42,775,058...42,775,143
Ensembl chr  X:42,775,058...42,775,143
JBrowse link
G PTPRC protein tyrosine phosphatase receptor type C involved_in IEA Ensembl GO_REF:0000107 NCBI chr 7:4,155,876...4,282,151
Ensembl chr 7:4,137,728...4,282,124
JBrowse link
G SBDS SBDS ribosome maturation factor involved_in ISO (PMID:15342903) UniProt PMID:15342903 NCBI chr 6:1,256,087...1,263,482
Ensembl chr 6:1,256,546...1,263,467
JBrowse link
G TP53 tumor protein p53 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 5:32,561,406...32,565,149
Ensembl chr 5:32,560,598...32,574,109
JBrowse link
central tolerance induction term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G FOXJ1 forkhead box J1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 9:4,512,898...4,517,764
Ensembl chr 9:4,513,628...4,517,756
JBrowse link
central tolerance induction to self antigen term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G AIRE autoimmune regulator involved_in IEA
IBA
Ensembl
GO_Central
GO_REF:0000033 GO_REF:0000107 NCBI chr31:38,139,513...38,149,294
Ensembl chr31:38,139,099...38,149,296
JBrowse link
hematopoietic or lymphoid organ development term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ASXL1 ASXL transcriptional regulator 1 involved_in
acts_upstream_of_or_within
IEA
ISO
(PMID:19861679) Ensembl
MGI
PMID:19861679 GO_REF:0000107 NCBI chr24:21,725,126...21,804,745
Ensembl chr24:21,661,059...21,802,815
JBrowse link
G LTBR lymphotoxin beta receptor involved_in IEA InterPro GO_REF:0000002 NCBI chr27:38,598,725...38,605,829
Ensembl chr27:38,599,268...38,605,780
JBrowse link
immunoglobulin heavy chain V-D-J recombination term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G POLB DNA polymerase beta involved_in
acts_upstream_of_or_within
IEA
ISO
(PMID:24388753) Ensembl
MGI
PMID:24388753 GO_REF:0000107 NCBI chr16:23,306,359...23,335,352
Ensembl chr16:23,306,367...23,335,322
JBrowse link
G YY1 YY1 transcription factor involved_in IEA Ensembl GO_REF:0000107 NCBI chr 8:68,539,511...68,572,796
Ensembl chr 8:68,539,353...68,568,058
JBrowse link
immunoglobulin V(D)J recombination term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G CYREN cell cycle regulator of NHEJ involved_in ISO (PMID:30017584), (PMID:31795137) UniProt PMID:30017584 PMID:31795137 NCBI chr16:12,994,508...13,003,632
Ensembl chr16:12,994,479...12,998,435
JBrowse link
G FOXP1 forkhead box P1 acts_upstream_of_or_within ISO (PMID:16819554) MGI PMID:16819554 NCBI chr20:20,438,631...21,020,516
Ensembl chr20:20,788,433...21,016,397
JBrowse link
G LIG4 DNA ligase 4 involved_in
acts_upstream_of_or_within
IEA
IBA
ISO
(PMID:9823897) Ensembl
GO_Central
MGI
PMID:9823897 GO_REF:0000033 GO_REF:0000107 NCBI chr22:56,980,333...56,987,636
Ensembl chr22:56,980,622...56,983,357
JBrowse link
G NHEJ1 non-homologous end joining factor 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr37:25,637,214...25,719,241
Ensembl chr37:25,637,601...25,715,372
JBrowse link
G PRKDC protein kinase, DNA-activated, catalytic subunit involved_in
acts_upstream_of_or_within
IBA
ISO
(PMID:9768755) GO_Central
MGI
PMID:9768755 GO_REF:0000033 NCBI chr29:24,904...243,926
Ensembl chr29:35,007...243,895
JBrowse link
G TCF3 transcription factor 3 acts_upstream_of_or_within
involved_in
ISO
IBA
IEA
(PMID:16428437) MGI
GO_Central
Ensembl
PMID:16428437 GO_REF:0000033 GO_REF:0000107 NCBI chr20:57,255,091...57,284,223
Ensembl chr20:57,254,384...57,283,981
JBrowse link
G XRCC4 X-ray repair cross complementing 4 acts_upstream_of_or_within
involved_in
ISO
IBA
(PMID:9875844) MGI
GO_Central
PMID:9875844 GO_REF:0000033 NCBI chr 3:24,316,598...24,547,463
Ensembl chr 3:24,269,974...24,533,465
JBrowse link
isotype switching term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G AICDA activation induced cytidine deaminase involved_in
acts_upstream_of_or_within
IEA
ISO
(PMID:17713479) Ensembl
MGI
PMID:17713479 GO_REF:0000107 NCBI chr27:37,064,107...37,073,791
Ensembl chr27:37,064,080...37,073,789
JBrowse link
G ATAD5 ATPase family AAA domain containing 5 involved_in
acts_upstream_of
IEA
ISO
(PMID:25404367) Ensembl
MGI
PMID:25404367 GO_REF:0000107 NCBI chr 9:40,869,778...40,917,976
Ensembl chr 9:40,870,924...40,915,629
JBrowse link
G BATF basic leucine zipper ATF-like transcription factor involved_in IEA Ensembl GO_REF:0000107 NCBI chr 8:48,537,036...48,561,154 JBrowse link
G CD40LG CD40 ligand involved_in IEA Ensembl GO_REF:0000107 NCBI chr  X:107,001,421...107,023,007
Ensembl chr  X:107,010,890...107,023,006
JBrowse link
G ERCC1 ERCC excision repair 1, endonuclease non-catalytic subunit involved_in
acts_upstream_of_or_within
IEA
ISO
(PMID:15280420) Ensembl
MGI
PMID:15280420 GO_REF:0000107 NCBI chr 1:110,130,353...110,146,660
Ensembl chr 1:110,130,481...110,146,602
JBrowse link
G EXO1 exonuclease 1 involved_in
acts_upstream_of_or_within
IEA
ISO
(PMID:14716311) Ensembl
MGI
PMID:14716311 GO_REF:0000107 NCBI chr 7:33,237,124...33,268,835
Ensembl chr 7:33,237,593...33,268,254
JBrowse link
G EXOSC3 exosome component 3 involved_in IEA Ensembl GO_REF:0000107 NCBI chr11:54,072,993...54,079,024
Ensembl chr11:54,073,313...54,078,598
JBrowse link
G EXOSC6 exosome component 6 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 5:76,286,286...76,287,667
Ensembl chr 5:76,286,789...76,287,976
JBrowse link
G LIG4 DNA ligase 4 involved_in
acts_upstream_of_or_within
IEA
ISO
(PMID:17713479) Ensembl
MGI
PMID:17713479 GO_REF:0000107 NCBI chr22:56,980,333...56,987,636
Ensembl chr22:56,980,622...56,983,357
JBrowse link
G MLH1 mutL homolog 1 involved_in
acts_upstream_of_or_within
IEA
ISO
(PMID:12743174) Ensembl
MGI
PMID:12743174 GO_REF:0000107 NCBI chr23:6,889,108...6,938,117
Ensembl chr23:6,889,135...6,938,116
JBrowse link
G MSH2 mutS homolog 2 involved_in
acts_upstream_of_or_within
IEA
ISO
(PMID:10430621)
(PMID:12743174)
Ensembl
MGI
PMID:10430621 PMID:12743174 GO_REF:0000107 NCBI chr10:49,517,448...49,594,001
Ensembl chr10:49,517,369...49,594,210
JBrowse link
G MSH6 mutS homolog 6 involved_in
acts_upstream_of_or_within
IEA
ISO
(PMID:16618598)
(PMID:17015724)
Ensembl
MGI
PMID:16618598 PMID:17015724 GO_REF:0000107 NCBI chr10:49,825,330...49,838,036
Ensembl chr10:49,803,898...49,838,028
JBrowse link
G NBN nibrin involved_in IEA Ensembl GO_REF:0000107 NCBI chr29:35,416,093...35,477,569
Ensembl chr29:35,416,093...35,477,563
JBrowse link
G NFKBIZ NFKB inhibitor zeta involved_in IEA Ensembl GO_REF:0000107 NCBI chr33:8,147,160...8,154,401
Ensembl chr33:8,073,840...8,154,561
JBrowse link
G PCYT1A phosphate cytidylyltransferase 1A, choline involved_in IEA Ensembl GO_REF:0000107 NCBI chr33:29,363,282...29,414,635
Ensembl chr33:29,358,452...29,430,424
JBrowse link
G RNF168 ring finger protein 168 involved_in ISO (PMID:20080757) UniProt PMID:20080757 NCBI chr33:29,542,209...29,575,127
Ensembl chr33:29,539,182...29,628,248
JBrowse link
G RNF8 ring finger protein 8 involved_in ISO (PMID:20080757) UniProt PMID:20080757 NCBI chr12:6,380,365...6,415,407
Ensembl chr12:6,292,459...6,415,382
JBrowse link
G SANBR SANT and BTB domain regulator of CSR involved_in IEA
IBA
Ensembl
GO_Central
GO_REF:0000033 GO_REF:0000107 NCBI chr10:61,143,971...61,195,058
Ensembl chr10:61,123,655...61,193,241
JBrowse link
G SWAP70 switching B cell complex subunit SWAP70 involved_in
acts_upstream_of_or_within
IEA
ISO
(PMID:9642267) Ensembl
MGI
PMID:9642267 GO_REF:0000107 NCBI chr21:32,910,547...32,985,617
Ensembl chr21:32,910,563...32,984,580
JBrowse link
G UNG uracil DNA glycosylase acts_upstream_of_or_within ISO (PMID:17015724) MGI PMID:17015724 NCBI chr26:17,900,354...17,911,126
Ensembl chr26:17,901,357...17,911,288
JBrowse link
G XRCC4 X-ray repair cross complementing 4 acts_upstream_of_or_within ISO (PMID:17713479) MGI PMID:17713479 NCBI chr 3:24,316,598...24,547,463
Ensembl chr 3:24,269,974...24,533,465
JBrowse link
isotype switching to IgA isotypes term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G CCR6 C-C motif chemokine receptor 6 involved_in ISO (PMID:27174992) UniProt PMID:27174992 NCBI chr 1:54,932,798...54,960,646
Ensembl chr 1:54,932,690...54,959,740
JBrowse link
isotype switching to IgE isotypes term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G BCL6 BCL6 transcription repressor involved_in
acts_upstream_of
IEA
ISO
(PMID:10490661) Ensembl
MGI
PMID:10490661 GO_REF:0000107 NCBI chr34:20,112,302...20,135,705
Ensembl chr34:20,113,322...20,124,704
JBrowse link
G FOXP3 forkhead box P3 involved_in
acts_upstream_of
IEA
ISO
(PMID:16275384) Ensembl
MGI
PMID:16275384 GO_REF:0000107 NCBI chr  X:42,331,229...42,362,841
Ensembl chr  X:42,344,108...42,350,758
JBrowse link
G IL4 interleukin 4 acts_upstream_of ISO (PMID:14988498) MGI PMID:14988498 NCBI chr11:20,972,693...20,981,539
Ensembl chr11:20,972,690...20,981,534
JBrowse link
G RTP2 receptor transporter protein 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chr34:20,087,395...20,091,248
Ensembl chr34:20,087,226...20,115,428
JBrowse link
G STAT6 signal transducer and activator of transcription 6 involved_in
acts_upstream_of
IEA
ISO
(PMID:10490661) Ensembl
MGI
PMID:10490661 GO_REF:0000107 NCBI chr10:1,232,515...1,247,011
Ensembl chr10:1,233,691...1,247,075
JBrowse link
isotype switching to IgG isotypes term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G HSPD1 heat shock protein family D (Hsp60) member 1 involved_in ISO (PMID:16148103) BHF-UCL PMID:16148103 NCBI chr37:7,010,421...7,025,912 JBrowse link
G IL4 interleukin 4 acts_upstream_of ISO (PMID:14988498) MGI PMID:14988498 NCBI chr11:20,972,693...20,981,539
Ensembl chr11:20,972,690...20,981,534
JBrowse link
lymph node development term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G B9D2 B9 domain containing 2 acts_upstream_of_or_within ISO (PMID:1436033) MGI PMID:1436033 NCBI chr 1:112,621,832...112,627,726
Ensembl chr 1:112,621,633...112,643,885
JBrowse link
G CCL21 C-C motif chemokine ligand 21 acts_upstream_of_or_within ISO (PMID:12732660) MGI PMID:12732660 NCBI chr11:51,375,107...51,375,790 JBrowse link
G CD248 CD248 molecule involved_in
acts_upstream_of_or_within
IEA
ISO
(PMID:20432232) Ensembl
MGI
PMID:20432232 GO_REF:0000107 NCBI chr18:50,991,552...50,994,185
Ensembl chr18:50,991,585...50,994,179
JBrowse link
G CD2AP CD2 associated protein involved_in
acts_upstream_of_or_within
IEA
ISO
(PMID:24218450) Ensembl
MGI
PMID:24218450 GO_REF:0000107 NCBI chr12:15,538,215...15,683,619
Ensembl chr12:15,538,356...15,681,011
JBrowse link
G CXCL13 C-X-C motif chemokine ligand 13 acts_upstream_of_or_within
involved_in
ISO (PMID:12732660)
(PMID:19783990)
MGI
BHF-UCL
PMID:12732660 PMID:19783990 NCBI chr32:2,047,277...2,053,277
Ensembl chr32:2,047,315...2,052,833
JBrowse link
G CXCR5 C-X-C motif chemokine receptor 5 involved_in
acts_upstream_of_or_within
IEA
ISO
(PMID:12732660) InterPro
MGI
Ensembl
PMID:12732660 GO_REF:0000002 GO_REF:0000107 NCBI chr 5:14,921,447...14,932,937
Ensembl chr 5:14,923,089...14,932,762
JBrowse link
G FADD Fas associated via death domain involved_in IEA Ensembl GO_REF:0000107 NCBI chr18:48,087,447...48,094,497 JBrowse link
G FLT3 fms related receptor tyrosine kinase 3 acts_upstream_of_or_within ISO (PMID:20457904) MGI PMID:20457904 NCBI chr25:11,551,372...11,670,891
Ensembl chr25:11,581,206...11,692,284
JBrowse link
G IKZF1 IKAROS family zinc finger 1 acts_upstream_of_or_within ISO (PMID:7923373) MGI PMID:7923373 NCBI chr18:1,661,851...1,750,987
Ensembl chr18:1,661,690...1,770,768
JBrowse link
G IL15 interleukin 15 involved_in
acts_upstream_of_or_within
IEA
ISO
(PMID:10704459) Ensembl
MGI
PMID:10704459 GO_REF:0000107 NCBI chr19:1,339,607...1,364,762
Ensembl chr19:1,339,967...1,364,762
JBrowse link
G IL7R interleukin 7 receptor involved_in
acts_upstream_of_or_within
IEA
ISO
(PMID:12732660) Ensembl
MGI
PMID:12732660 GO_REF:0000107 NCBI chr 4:72,633,528...72,668,242
Ensembl chr 4:72,636,325...72,668,300
JBrowse link
G LTA lymphotoxin alpha involved_in
acts_upstream_of_or_within
IEA
ISO
(PMID:9368616)
(PMID:8171322)
(PMID:9565643)
(PMID:7636227)
(PMID:10415063)
Ensembl
MGI
PMID:7636227 PMID:8171322 PMID:9368616 PMID:9565643 PMID:10415063 GO_REF:0000107 NCBI chr12:1,070,608...1,073,053
Ensembl chr12:1,071,192...1,073,067
JBrowse link
G LTB lymphotoxin beta involved_in
acts_upstream_of_or_within
IEA
ISO
(PMID:9256477)
(PMID:9133428)
Ensembl
MGI
PMID:9133428 PMID:9256477 GO_REF:0000107 NCBI chr12:1,079,340...1,084,785
Ensembl chr12:1,079,358...1,081,153
JBrowse link
G NKX2-3 NK2 homeobox 3 involved_in
acts_upstream_of_or_within
IEA
ISO
(PMID:10790368)
(PMID:10926756)
Ensembl
MGI
PMID:10790368 PMID:10926756 GO_REF:0000107 NCBI chr28:12,466,319...12,469,467
Ensembl chr28:12,466,368...12,469,473
JBrowse link
G PDPN podoplanin involved_in ISS UniProt GO_REF:0000024 NCBI chr 2:83,552,735...83,581,375
Ensembl chr 2:83,552,830...83,581,375
JBrowse link
G POLB DNA polymerase beta involved_in
acts_upstream_of_or_within
IEA
ISO
(PMID:24388753) Ensembl
MGI
PMID:24388753 GO_REF:0000107 NCBI chr16:23,306,359...23,335,352
Ensembl chr16:23,306,367...23,335,322
JBrowse link
G RC3H1 ring finger and CCCH-type domains 1 involved_in
acts_upstream_of_or_within
IEA
ISO
(PMID:23583643) Ensembl
MGI
PMID:23583643 GO_REF:0000107 NCBI chr 7:25,265,836...25,312,417
Ensembl chr 7:25,233,235...25,305,174
JBrowse link
G RC3H2 ring finger and CCCH-type domains 2 involved_in
acts_upstream_of_or_within
IEA
ISO
(PMID:23583643) Ensembl
MGI
PMID:23583643 GO_REF:0000107 NCBI chr 9:59,881,889...59,943,271
Ensembl chr 9:59,881,966...59,929,341
JBrowse link
G RCBTB2 RCC1 and BTB domain containing protein 2 acts_upstream_of_or_within ISO (PMID:26291700) MGI PMID:26291700 NCBI chr22:3,018,628...3,051,059
Ensembl chr22:3,018,137...3,051,269
JBrowse link
G RIPK3 receptor interacting serine/threonine kinase 3 involved_in ISO (PMID:21876153) UniProt PMID:21876153 NCBI chr 8:4,304,167...4,309,514
Ensembl chr 8:4,305,250...4,309,325
JBrowse link
G RORC RAR related orphan receptor C acts_upstream_of_or_within
involved_in
ISO (PMID:14691482) MGI
UniProt
PMID:14691482 NCBI chr17:60,821,498...60,842,485
Ensembl chr17:60,821,981...60,842,453
JBrowse link
G SPNS2 SPNS lysolipid transporter 2, sphingosine-1-phosphate involved_in
acts_upstream_of_or_within
IEA
ISO
(PMID:23180825) Ensembl
MGI
PMID:23180825 GO_REF:0000107 NCBI chr 5:30,494,355...30,527,669 JBrowse link
G SPNS3 SPNS lysolipid transporter 3, sphingosine-1-phosphate (putative) involved_in IEA Ensembl GO_REF:0000107 NCBI chr 5:30,464,288...30,493,609
Ensembl chr 5:30,464,513...30,526,882
JBrowse link
G TGFB1 transforming growth factor beta 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 1:112,629,476...112,643,885
Ensembl chr 1:112,621,633...112,643,885
JBrowse link
G TNFRSF11A TNF receptor superfamily member 11a involved_in
acts_upstream_of_or_within
IEA
IBA
ISO
(PMID:10500098) Ensembl
GO_Central
MGI
PMID:10500098 GO_REF:0000033 GO_REF:0000107 NCBI chr 1:14,504,595...14,555,956
Ensembl chr 1:14,503,033...14,556,041
JBrowse link
G TOX thymocyte selection associated high mobility group box involved_in
acts_upstream_of_or_within
IEA
ISO
(PMID:20818394) Ensembl
MGI
PMID:20818394 GO_REF:0000107 NCBI chr29:9,542,471...9,841,759
Ensembl chr29:9,544,561...9,842,034
JBrowse link
G TRAF3IP2 TRAF3 interacting protein 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chr12:68,029,861...68,070,901
Ensembl chr12:68,030,197...68,058,518
JBrowse link
mucosa-associated lymphoid tissue development term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G NKX2-3 NK2 homeobox 3 involved_in
acts_upstream_of_or_within
IEA
ISO
(PMID:10926756) Ensembl
MGI
PMID:10926756 GO_REF:0000107 NCBI chr28:12,466,319...12,469,467
Ensembl chr28:12,466,368...12,469,473
JBrowse link
G RORC RAR related orphan receptor C acts_upstream_of_or_within ISO (PMID:15247480) MGI PMID:15247480 NCBI chr17:60,821,498...60,842,485
Ensembl chr17:60,821,981...60,842,453
JBrowse link
natural killer cell tolerance induction term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G DLA-12 MHC class I DLA-12 involved_in ISO (PMID:9486650) UniProt PMID:9486650 NCBI chr12:933,321...936,671
Ensembl chr12:932,613...987,561
JBrowse link
G HAVCR2 hepatitis A virus cellular receptor 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 4:53,018,990...53,032,035
Ensembl chr 4:53,012,234...53,033,393
JBrowse link
G LGALS9 galectin 9 involved_in ISO (PMID:25578313) UniProt PMID:25578313 NCBI chr 9:42,154,613...42,170,423
Ensembl chr 9:42,154,702...42,170,391
JBrowse link
negative regulation of isotype switching term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G PARP3 poly(ADP-ribose) polymerase family member 3 involved_in IEA Ensembl GO_REF:0000107 NCBI chr20:37,767,336...37,774,269
Ensembl chr20:37,767,505...37,773,770
JBrowse link
negative regulation of isotype switching to IgE isotypes term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G BCL6 BCL6 transcription repressor involved_in
acts_upstream_of_or_within
IEA
ISO
(PMID:10490661) Ensembl
MGI
PMID:10490661 GO_REF:0000107 NCBI chr34:20,112,302...20,135,705
Ensembl chr34:20,113,322...20,124,704
JBrowse link
G FOXP3 forkhead box P3 involved_in
acts_upstream_of_or_within
IEA
ISO
(PMID:16275384) Ensembl
MGI
PMID:16275384 GO_REF:0000107 NCBI chr  X:42,331,229...42,362,841
Ensembl chr  X:42,344,108...42,350,758
JBrowse link
G NDFIP1 Nedd4 family interacting protein 1 involved_in
acts_upstream_of_or_within
IEA
ISO
(PMID:17137798) Ensembl
MGI
PMID:17137798 GO_REF:0000107 NCBI chr 2:36,978,148...37,065,247
Ensembl chr 2:36,961,024...37,064,303
JBrowse link
G RTP2 receptor transporter protein 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chr34:20,087,395...20,091,248
Ensembl chr34:20,087,226...20,115,428
JBrowse link
negative regulation of T cell anergy term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G CD86 CD86 molecule ISO RGD PMID:18424705 RGD:4892228 NCBI chr33:25,256,267...25,318,855
Ensembl chr33:25,256,267...25,318,087
JBrowse link
negative regulation of tolerance induction term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G PDCD1 programmed cell death 1 acts_upstream_of_or_within ISO (PMID:23636058) MGI PMID:23636058 NCBI chr25:51,606,559...51,618,903
Ensembl chr25:51,608,173...51,618,723
JBrowse link
peripheral T cell tolerance induction term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G AIRE autoimmune regulator involved_in IEA
IBA
Ensembl
GO_Central
GO_REF:0000033 GO_REF:0000107 NCBI chr31:38,139,513...38,149,294
Ensembl chr31:38,139,099...38,149,296
JBrowse link
Peyer's patch development term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ADA adenosine deaminase involved_in
acts_upstream_of_or_within
IEA
ISO
(PMID:10720488) Ensembl
MGI
PMID:10720488 GO_REF:0000107 NCBI chr24:32,083,786...32,119,810
Ensembl chr24:32,083,931...32,111,160
JBrowse link
G CACNB4 calcium voltage-gated channel auxiliary subunit beta 4 involved_in
acts_upstream_of_or_within
IEA
ISO
(PMID:5037658) Ensembl
MGI
PMID:5037658 GO_REF:0000107 NCBI chr19:52,987,170...53,116,410
Ensembl chr19:52,993,618...53,116,140
Ensembl chr19:52,993,618...53,116,140
JBrowse link
G IKZF1 IKAROS family zinc finger 1 acts_upstream_of_or_within ISO (PMID:7923373) MGI PMID:7923373 NCBI chr18:1,661,851...1,750,987
Ensembl chr18:1,661,690...1,770,768
JBrowse link
G LOC102151783 inhibitor of DNA binding 2 acts_upstream_of_or_within ISO (PMID:17452521) MGI PMID:17452521 NCBI chr10:54,954,852...54,957,116 JBrowse link
G NKX2-3 NK2 homeobox 3 involved_in
acts_upstream_of_or_within
IEA
ISO
(PMID:10790368) Ensembl
MGI
PMID:10790368 GO_REF:0000107 NCBI chr28:12,466,319...12,469,467
Ensembl chr28:12,466,368...12,469,473
JBrowse link
G RORC RAR related orphan receptor C involved_in ISO (PMID:14691482) UniProt PMID:14691482 NCBI chr17:60,821,498...60,842,485
Ensembl chr17:60,821,981...60,842,453
JBrowse link
G STAT5A signal transducer and activator of transcription 5A acts_upstream_of_or_within ISO (PMID:15294943) MGI PMID:15294943 NCBI chr 9:20,616,041...20,638,523
Ensembl chr 9:20,617,151...20,638,103
JBrowse link
G STAT5B signal transducer and activator of transcription 5B involved_in
acts_upstream_of_or_within
IEA
ISO
(PMID:15294943) Ensembl
MGI
PMID:15294943 GO_REF:0000107 NCBI chr 9:20,647,712...20,718,453
Ensembl chr 9:20,691,483...20,716,485
JBrowse link
G TCF3 transcription factor 3 acts_upstream_of_or_within ISO (PMID:17452521) MGI PMID:17452521 NCBI chr20:57,255,091...57,284,223
Ensembl chr20:57,254,384...57,283,981
JBrowse link
G TOX thymocyte selection associated high mobility group box involved_in
acts_upstream_of_or_within
IEA
ISO
(PMID:20818394) Ensembl
MGI
PMID:20818394 GO_REF:0000107 NCBI chr29:9,542,471...9,841,759
Ensembl chr29:9,544,561...9,842,034
JBrowse link
Peyer's patch morphogenesis term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ARTN artemin involved_in ISO (PMID:17322904) UniProt PMID:17322904
G FOXL1 forkhead box L1 involved_in
acts_upstream_of_or_within
IEA
ISO
(PMID:12648490) Ensembl
MGI
PMID:12648490 GO_REF:0000107 NCBI chr 5:66,281,543...66,287,357
Ensembl chr 5:66,283,528...66,284,598
JBrowse link
G RET ret proto-oncogene involved_in IEA Ensembl GO_REF:0000107 NCBI chr28:3,946,132...3,995,505
Ensembl chr28:3,947,232...3,994,210
JBrowse link
positive regulation of B cell tolerance induction term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G TGFBR2 transforming growth factor beta receptor 2 involved_in
acts_upstream_of_or_within
IEA
ISO
(PMID:16973387) Ensembl
MGI
PMID:16973387 GO_REF:0000107 NCBI chr23:13,886,869...13,946,480
Ensembl chr23:13,889,000...13,977,636
JBrowse link
positive regulation of central B cell tolerance induction term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G FOXJ1 forkhead box J1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 9:4,512,898...4,517,764
Ensembl chr 9:4,513,628...4,517,756
JBrowse link
positive regulation of interleukin-4-dependent isotype switching to IgE isotypes term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G TNFSF4 TNF superfamily member 4 involved_in ISO (PMID:12496423) BHF-UCL PMID:12496423 NCBI chr 7:25,883,297...25,909,608
Ensembl chr 7:25,883,251...25,906,892
JBrowse link
positive regulation of isotype switching term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G EXOSC3 exosome component 3 involved_in
acts_upstream_of_or_within
IEA
ISO
(PMID:21255825) Ensembl
MGI
PMID:21255825 GO_REF:0000107 NCBI chr11:54,072,993...54,079,024
Ensembl chr11:54,073,313...54,078,598
JBrowse link
G EXOSC6 exosome component 6 involved_in
acts_upstream_of_or_within
IEA
ISO
(PMID:21255825) Ensembl
MGI
PMID:21255825 GO_REF:0000107 NCBI chr 5:76,286,286...76,287,667
Ensembl chr 5:76,286,789...76,287,976
JBrowse link
G HMCES 5-hydroxymethylcytosine binding, ES cell specific involved_in IEA Ensembl GO_REF:0000107 NCBI chr20:2,808,687...2,831,123
Ensembl chr20:2,808,689...2,830,462
JBrowse link
G KMT5B lysine methyltransferase 5B involved_in IEA Ensembl GO_REF:0000107 NCBI chr18:49,655,783...49,691,899
Ensembl chr18:49,637,610...49,827,034
JBrowse link
G KMT5C lysine methyltransferase 5C involved_in IEA Ensembl GO_REF:0000107 NCBI chr 1:102,334,687...102,342,090
Ensembl chr 1:102,333,543...102,342,118
JBrowse link
G MAD2L2 mitotic arrest deficient 2 like 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 2:84,539,724...84,549,402
Ensembl chr 2:84,545,226...84,549,356
JBrowse link
G PAXIP1 PAX interacting protein 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr16:18,066,289...18,116,007
Ensembl chr16:18,066,246...18,112,506
JBrowse link
G RIF1 replication timing regulatory factor 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr19:52,661,278...52,711,969
Ensembl chr19:52,661,155...52,709,279
JBrowse link
G SHLD1 shieldin complex subunit 1 involved_in IEA
IBA
Ensembl
GO_Central
GO_REF:0000033 GO_REF:0000107 NCBI chr24:15,957,863...16,037,336
Ensembl chr24:15,957,852...16,038,008
JBrowse link
G SHLD2 shieldin complex subunit 2 involved_in ISO (PMID:29656893) UniProt PMID:29656893 NCBI chr 4:34,665,111...34,740,645
Ensembl chr 4:34,688,245...34,763,705
JBrowse link
G SHLD3 shieldin complex subunit 3 involved_in ISO (PMID:29656893) UniProt PMID:29656893
G TFRC transferrin receptor involved_in IEA
ISS
Ensembl
UniProt
GO_REF:0000024 GO_REF:0000107 NCBI chr33:29,206,024...29,237,221
Ensembl chr33:29,208,609...29,238,242
JBrowse link
G TP53BP1 tumor protein p53 binding protein 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr30:10,263,650...10,362,646
Ensembl chr30:10,263,650...10,336,134
JBrowse link
positive regulation of isotype switching to IgA isotypes term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G B9D2 B9 domain containing 2 acts_upstream_of_or_within ISO (PMID:14988498) MGI PMID:14988498 NCBI chr 1:112,621,832...112,627,726
Ensembl chr 1:112,621,633...112,643,885
JBrowse link
G MLH1 mutL homolog 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr23:6,889,108...6,938,117
Ensembl chr23:6,889,135...6,938,116
JBrowse link
G MSH2 mutS homolog 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chr10:49,517,448...49,594,001
Ensembl chr10:49,517,369...49,594,210
JBrowse link
G NSD2 nuclear receptor binding SET domain protein 2 involved_in
acts_upstream_of_or_within
IEA
ISO
(PMID:23241889) Ensembl
MGI
PMID:23241889 GO_REF:0000107 NCBI chr 3:62,164,888...62,228,006
Ensembl chr 3:62,167,939...62,228,035
JBrowse link
G PMS2 PMS1 homolog 2, mismatch repair system component involved_in IEA Ensembl GO_REF:0000107 NCBI chr 6:11,411,062...11,438,767
Ensembl chr 6:11,349,453...11,438,940
JBrowse link
G TGFB1 transforming growth factor beta 1 involved_in ISS
IEA
AgBase
Ensembl
GO_REF:0000024 GO_REF:0000107 NCBI chr 1:112,629,476...112,643,885
Ensembl chr 1:112,621,633...112,643,885
JBrowse link
G TNFSF13 TNF superfamily member 13 acts_upstream_of_or_within
involved_in
ISO
IBA
IEA
(PMID:14988498) MGI
GO_Central
Ensembl
PMID:14988498 GO_REF:0000033 GO_REF:0000107 NCBI chr 5:32,482,723...32,484,790
Ensembl chr 5:32,482,723...32,484,789
JBrowse link
positive regulation of isotype switching to IgE isotypes term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G CLCF1 cardiotrophin like cytokine factor 1 involved_in ISO (PMID:12023368) BHF-UCL PMID:12023368 NCBI chr18:50,084,120...50,093,825
Ensembl chr18:50,083,915...50,102,651
JBrowse link
G IL4 interleukin 4 involved_in
acts_upstream_of_or_within
ISS
ISO
(PMID:14988498) UniProt
MGI
PMID:14988498 GO_REF:0000024 NCBI chr11:20,972,693...20,981,539
Ensembl chr11:20,972,690...20,981,534
JBrowse link
G STAT6 signal transducer and activator of transcription 6 involved_in
acts_upstream_of_or_within
IEA
ISO
(PMID:10490661) Ensembl
MGI
PMID:10490661 GO_REF:0000107 NCBI chr10:1,232,515...1,247,011
Ensembl chr10:1,233,691...1,247,075
JBrowse link
positive regulation of isotype switching to IgG isotypes term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ATAD5 ATPase family AAA domain containing 5 involved_in
acts_upstream_of_or_within
IEA
ISO
(PMID:25404367) Ensembl
MGI
PMID:25404367 GO_REF:0000107 NCBI chr 9:40,869,778...40,917,976
Ensembl chr 9:40,870,924...40,915,629
JBrowse link
G CD28 CD28 molecule involved_in
acts_upstream_of_or_within
IEA
ISO
(PMID:7688139) Ensembl
MGI
PMID:7688139 GO_REF:0000107 NCBI chr37:12,503,849...12,536,362
Ensembl chr37:12,503,811...12,532,854
JBrowse link
G CD40 CD40 molecule acts_upstream_of_or_within ISO (PMID:12882831) MGI PMID:12882831 NCBI chr24:33,352,992...33,383,488
Ensembl chr24:33,372,930...33,383,301
JBrowse link
G IFNG interferon gamma acts_upstream_of_or_within ISO (PMID:12882831) MGI PMID:12882831 NCBI chr10:10,406,866...10,411,698
Ensembl chr10:10,406,867...10,411,698
JBrowse link
G IL2 interleukin 2 acts_upstream_of_or_within
involved_in
ISO
IEA
(PMID:1830926) MGI
Ensembl
PMID:1830926 GO_REF:0000107 NCBI chr19:17,750,780...17,756,394
Ensembl chr19:17,750,780...17,756,394
JBrowse link
G IL4 interleukin 4 involved_in
acts_upstream_of_or_within
ISS
ISO
(PMID:12882831), (PMID:14988498) UniProt
MGI
PMID:12882831 PMID:14988498 GO_REF:0000024 NCBI chr11:20,972,693...20,981,539
Ensembl chr11:20,972,690...20,981,534
JBrowse link
G MLH1 mutL homolog 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr23:6,889,108...6,938,117
Ensembl chr23:6,889,135...6,938,116
JBrowse link
G MSH2 mutS homolog 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chr10:49,517,448...49,594,001
Ensembl chr10:49,517,369...49,594,210
JBrowse link
G PAGR1 PAXIP1 associated glutamate rich protein 1 involved_in ISO (PMID:26744420) UniProt PMID:26744420 NCBI chr 6:17,876,740...17,879,546 JBrowse link
G PAXIP1 PAX interacting protein 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr16:18,066,289...18,116,007
Ensembl chr16:18,066,246...18,112,506
JBrowse link
G PMS2 PMS1 homolog 2, mismatch repair system component involved_in IEA Ensembl GO_REF:0000107 NCBI chr 6:11,411,062...11,438,767
Ensembl chr 6:11,349,453...11,438,940
JBrowse link
G PTPRC protein tyrosine phosphatase receptor type C involved_in
acts_upstream_of_or_within
IEA
ISO
(PMID:9015183) Ensembl
MGI
PMID:9015183 GO_REF:0000107 NCBI chr 7:4,155,876...4,282,151
Ensembl chr 7:4,137,728...4,282,124
JBrowse link
G TBX21 T-box transcription factor 21 involved_in
acts_upstream_of_or_within
IEA
ISO
(PMID:12882831) Ensembl
MGI
PMID:12882831 GO_REF:0000107 NCBI chr 9:24,077,752...24,086,560
Ensembl chr 9:24,077,761...24,086,261
JBrowse link
positive regulation of macrophage tolerance induction term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G IRAK3 interleukin 1 receptor associated kinase 3 involved_in IEA Ensembl GO_REF:0000107 NCBI chr10:8,683,541...8,730,757
Ensembl chr10:8,684,242...8,729,268
JBrowse link
positive regulation of peripheral T cell tolerance induction term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G FOXP3 forkhead box P3 involved_in
acts_upstream_of_or_within
IEA
ISO
(PMID:16532000) Ensembl
MGI
PMID:16532000 GO_REF:0000107 NCBI chr  X:42,331,229...42,362,841
Ensembl chr  X:42,344,108...42,350,758
JBrowse link
positive regulation of T cell anergy term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G CBLB Cbl proto-oncogene B involved_in
acts_upstream_of_or_within
IEA
ISO
(PMID:14973438) Ensembl
MGI
PMID:14973438 GO_REF:0000107 NCBI chr33:11,255,453...11,665,755
Ensembl chr33:11,199,863...11,530,810
JBrowse link
G CD3E CD3 epsilon subunit of T-cell receptor complex acts_upstream_of_or_within ISO (PMID:14973438) MGI PMID:14973438 NCBI chr 5:15,403,724...15,415,259
Ensembl chr 5:15,403,710...15,415,260
JBrowse link
G FOXP3 forkhead box P3 involved_in
acts_upstream_of_or_within
IEA
ISO
(PMID:16945588) Ensembl
MGI
PMID:16945588 GO_REF:0000107 NCBI chr  X:42,331,229...42,362,841
Ensembl chr  X:42,344,108...42,350,758
JBrowse link
G ITCH itchy E3 ubiquitin protein ligase involved_in
acts_upstream_of_or_within
IEA
ISO
(PMID:14973438) Ensembl
MGI
PMID:14973438 GO_REF:0000107 NCBI chr24:23,476,619...23,630,574
Ensembl chr24:23,476,736...23,627,469
JBrowse link
G LOC484306 leukocyte immunoglobulin-like receptor subfamily B member 3 involved_in ISO (PMID:16493035) ARUK-UCL PMID:16493035 NCBI chr 1:102,779,562...102,786,924 JBrowse link
G NR5A2 nuclear receptor subfamily 5 group A member 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 7:2,925,915...3,062,118
Ensembl chr 7:2,927,326...3,062,348
JBrowse link
positive regulation of T cell tolerance induction term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G FOXP3 forkhead box P3 involved_in
acts_upstream_of_or_within
IEA
ISO
(PMID:16945588) Ensembl
MGI
PMID:16945588 GO_REF:0000107 NCBI chr  X:42,331,229...42,362,841
Ensembl chr  X:42,344,108...42,350,758
JBrowse link
G IDO1 indoleamine 2,3-dioxygenase 1 acts_upstream_of_or_within ISO (PMID:9712583) MGI PMID:9712583 NCBI chr16:25,391,759...25,407,161
Ensembl chr16:25,391,754...25,407,048
JBrowse link
G TGFBR2 transforming growth factor beta receptor 2 involved_in
acts_upstream_of_or_within
IEA
ISO
(PMID:16973387) Ensembl
MGI
PMID:16973387 GO_REF:0000107 NCBI chr23:13,886,869...13,946,480
Ensembl chr23:13,889,000...13,977,636
JBrowse link
positive regulation of tolerance induction to self antigen term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G TGFBR2 transforming growth factor beta receptor 2 involved_in
acts_upstream_of_or_within
IEA
ISO
(PMID:16973387) Ensembl
MGI
PMID:16973387 GO_REF:0000107 NCBI chr23:13,886,869...13,946,480
Ensembl chr23:13,889,000...13,977,636
JBrowse link
regulation of isotype switching term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G APLF aprataxin and PNKP like factor acts_upstream_of_or_within ISO (PMID:21211721) MGI PMID:21211721 NCBI chr10:67,454,500...67,522,659
Ensembl chr10:67,454,356...67,521,761
JBrowse link
G MIR181B-2 microRNA mir-181b-2 acts_upstream_of_or_within ISO (PMID:18762567) MGI PMID:18762567 NCBI chr 9:58,301,314...58,301,373
Ensembl chr 9:58,301,300...58,301,388
JBrowse link
G MIR181D microRNA mir-181d acts_upstream_of_or_within ISO (PMID:18762567) MGI PMID:18762567 NCBI chr20:48,593,158...48,593,221 JBrowse link
G SUPT6H SPT6 homolog, histone chaperone and transcription elongation factor involved_in IEA Ensembl GO_REF:0000107 NCBI chr 9:42,859,154...42,896,044
Ensembl chr 9:42,859,361...42,904,487
JBrowse link
regulation of isotype switching to IgG isotypes term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G FOXP3 forkhead box P3 involved_in
acts_upstream_of_or_within
IEA
ISO
(PMID:16275384) Ensembl
MGI
PMID:16275384 GO_REF:0000107 NCBI chr  X:42,331,229...42,362,841
Ensembl chr  X:42,344,108...42,350,758
JBrowse link
G IL27RA interleukin 27 receptor subunit alpha involved_in
acts_upstream_of_or_within
IEA
ISO
(PMID:11057672) Ensembl
MGI
PMID:11057672 GO_REF:0000107 NCBI chr20:48,456,766...48,475,414
Ensembl chr20:48,457,134...48,472,450
JBrowse link
G NDFIP1 Nedd4 family interacting protein 1 involved_in
acts_upstream_of_or_within
IEA
ISO
(PMID:17137798) Ensembl
MGI
PMID:17137798 GO_REF:0000107 NCBI chr 2:36,978,148...37,065,247
Ensembl chr 2:36,961,024...37,064,303
JBrowse link
G SLC15A4 solute carrier family 15 member 4 involved_in IEA Ensembl GO_REF:0000107 NCBI chr26:2,803,798...2,832,057
Ensembl chr26:2,802,724...2,831,530
JBrowse link
regulation of T cell anergy term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G DLA88 MHC class I DLA-88 involved_in ISO (PMID:20008523) BHF-UCL PMID:20008523 NCBI chr12:892,442...895,691
Ensembl chr12:892,388...1,021,690
JBrowse link
G FOXP3 forkhead box P3 involved_in IEA Ensembl GO_REF:0000107 NCBI chr  X:42,331,229...42,362,841
Ensembl chr  X:42,344,108...42,350,758
JBrowse link
G PHLPP1 PH domain and leucine rich repeat protein phosphatase 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 1:14,027,741...14,234,229
Ensembl chr 1:14,028,652...14,234,229
JBrowse link
G RUNX1 RUNX family transcription factor 1 involved_in ISO (PMID:17377532) UniProt PMID:17377532 NCBI chr31:30,170,859...30,420,344
Ensembl chr31:30,170,605...30,420,839
JBrowse link
regulation of T cell tolerance induction term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G IL2RA interleukin 2 receptor subunit alpha involved_in ISO (PMID:23416241) UniProt PMID:23416241 NCBI chr 2:29,892,130...29,948,926
Ensembl chr 2:29,894,125...29,944,643
JBrowse link
regulation of tolerance induction term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G HMGB1 high mobility group box 1 involved_in ISO (PMID:18631454) UniProt PMID:18631454 NCBI chr25:9,431,223...9,558,167
Ensembl chr25:9,431,218...9,558,165
JBrowse link
G MARCHF7 membrane associated ring-CH-type finger 7 involved_in
acts_upstream_of_or_within
IEA
ISO
(PMID:15670816) Ensembl
MGI
PMID:15670816 GO_REF:0000107 NCBI chr36:5,481,449...5,533,139
Ensembl chr36:5,481,456...5,531,957
JBrowse link
regulation of tolerance induction dependent upon immune response term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G HAVCR2 hepatitis A virus cellular receptor 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 4:53,018,990...53,032,035
Ensembl chr 4:53,012,234...53,033,393
JBrowse link
somatic diversification of immune receptors via somatic mutation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ADAR adenosine deaminase RNA specific involved_in
acts_upstream_of_or_within
IEA
ISO
(PMID:23209284) Ensembl
MGI
PMID:23209284 GO_REF:0000107 NCBI chr 7:42,762,021...42,785,192
Ensembl chr 7:42,748,136...42,782,999
JBrowse link
somatic diversification of immunoglobulins term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G AICDA activation induced cytidine deaminase involved_in IEA Ensembl GO_REF:0000107 NCBI chr27:37,064,107...37,073,791
Ensembl chr27:37,064,080...37,073,789
JBrowse link
G CTNNBL1 catenin beta like 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr24:26,253,884...26,415,166
Ensembl chr24:26,253,962...26,415,163
JBrowse link
G POLB DNA polymerase beta involved_in
acts_upstream_of_or_within
IEA
ISO
(PMID:24388753) Ensembl
MGI
PMID:24388753 GO_REF:0000107 NCBI chr16:23,306,359...23,335,352
Ensembl chr16:23,306,367...23,335,322
JBrowse link
somatic hypermutation of immunoglobulin genes term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G AICDA activation induced cytidine deaminase involved_in ISS
IEA
UniProt
Ensembl
GO_REF:0000024 GO_REF:0000107 NCBI chr27:37,064,107...37,073,791
Ensembl chr27:37,064,080...37,073,789
JBrowse link
G EXO1 exonuclease 1 involved_in
acts_upstream_of_or_within
IEA
ISO
(PMID:14716311) Ensembl
MGI
PMID:14716311 GO_REF:0000107 NCBI chr 7:33,237,124...33,268,835
Ensembl chr 7:33,237,593...33,268,254
JBrowse link
G HMCES 5-hydroxymethylcytosine binding, ES cell specific involved_in IEA Ensembl GO_REF:0000107 NCBI chr20:2,808,687...2,831,123
Ensembl chr20:2,808,689...2,830,462
JBrowse link
G MCM3AP minichromosome maintenance complex component 3 associated protein involved_in IEA Ensembl GO_REF:0000107 NCBI chr31:39,507,714...39,559,855
Ensembl chr31:39,507,729...39,561,674
JBrowse link
G MLH1 mutL homolog 1 involved_in
acts_upstream_of_or_within
IEA
IBA
ISO
(PMID:10092760), (PMID:10429667) Ensembl
GO_Central
MGI
PMID:10092760 PMID:10429667 GO_REF:0000033 GO_REF:0000107 NCBI chr23:6,889,108...6,938,117
Ensembl chr23:6,889,135...6,938,116
JBrowse link
G MSH2 mutS homolog 2 involved_in
acts_upstream_of_or_within
NOT|acts_upstream_of_or_within
IEA
ISO
(PMID:14568978)
(PMID:9607915)
(PMID:15494304)
(PMID:9607916)
(PMID:9697842), (PMID:9697843)
Ensembl
MGI
PMID:9607915 PMID:9607916 PMID:9697842 PMID:9697843 PMID:14568978 More... GO_REF:0000107 NCBI chr10:49,517,448...49,594,001
Ensembl chr10:49,517,369...49,594,210
JBrowse link
G MSH3 mutS homolog 3 NOT|acts_upstream_of_or_within ISO (PMID:10662804) MGI PMID:10662804 NCBI chr 3:26,335,788...26,520,633
Ensembl chr 3:26,336,403...26,518,521
JBrowse link
G MSH6 mutS homolog 6 involved_in
acts_upstream_of_or_within
IEA
ISO
(PMID:16618598)
(PMID:10662804), (PMID:15238604), (PMID:17015724)
Ensembl
MGI
PMID:10662804 PMID:15238604 PMID:16618598 PMID:17015724 GO_REF:0000107 NCBI chr10:49,825,330...49,838,036
Ensembl chr10:49,803,898...49,838,028
JBrowse link
G NUGGC nuclear GTPase, germinal center associated acts_upstream_of_or_within ISO (PMID:22833677) MGI PMID:22833677 NCBI chr25:29,507,198...29,561,565
Ensembl chr25:29,520,921...29,561,349
JBrowse link
G PMS2 PMS1 homolog 2, mismatch repair system component involved_in
acts_upstream_of_or_within
IEA
IBA
ISO
(PMID:10429667) Ensembl
GO_Central
MGI
PMID:10429667 GO_REF:0000033 GO_REF:0000107 NCBI chr 6:11,411,062...11,438,767
Ensembl chr 6:11,349,453...11,438,940
JBrowse link
G POLB DNA polymerase beta involved_in
acts_upstream_of_or_within
IEA
ISO
(PMID:24388753) Ensembl
MGI
PMID:24388753 GO_REF:0000107 NCBI chr16:23,306,359...23,335,352
Ensembl chr16:23,306,367...23,335,322
JBrowse link
G POLM DNA polymerase mu acts_upstream_of_or_within ISO (PMID:15789338) MGI PMID:15789338
G POLQ DNA polymerase theta involved_in IEA Ensembl GO_REF:0000107 NCBI chr33:24,713,174...24,837,113
Ensembl chr33:24,714,086...24,837,402
JBrowse link
G SAMHD1 SAM and HD domain containing deoxynucleoside triphosphate triphosphohydrolase 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr24:25,623,997...25,676,336
Ensembl chr24:25,626,134...25,680,902
JBrowse link
G UNG uracil DNA glycosylase acts_upstream_of_or_within ISO (PMID:17015724)
(PMID:15494304)
MGI PMID:15494304 PMID:17015724 NCBI chr26:17,900,354...17,911,126
Ensembl chr26:17,901,357...17,911,288
JBrowse link
somatic recombination of immunoglobulin gene segments term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G MLH1 mutL homolog 1 involved_in
acts_upstream_of_or_within
IEA
ISO
(PMID:11828012) Ensembl
MGI
PMID:11828012 GO_REF:0000107 NCBI chr23:6,889,108...6,938,117
Ensembl chr23:6,889,135...6,938,116
JBrowse link
G MSH2 mutS homolog 2 involved_in
acts_upstream_of_or_within
IEA
ISO
(PMID:15494304)
(PMID:11828012)
(PMID:14568978)
(PMID:14563316), (PMID:15955838)
Ensembl
MGI
PMID:11828012 PMID:14563316 PMID:14568978 PMID:15494304 PMID:15955838 GO_REF:0000107 NCBI chr10:49,517,448...49,594,001
Ensembl chr10:49,517,369...49,594,210
JBrowse link
G MSH3 mutS homolog 3 acts_upstream_of_or_within
involved_in
ISO
IBA
(PMID:15238604) MGI
GO_Central
PMID:15238604 GO_REF:0000033 NCBI chr 3:26,335,788...26,520,633
Ensembl chr 3:26,336,403...26,518,521
JBrowse link
G MSH6 mutS homolog 6 involved_in
acts_upstream_of_or_within
IEA
ISO
(PMID:15238604) Ensembl
MGI
PMID:15238604 GO_REF:0000107 NCBI chr10:49,825,330...49,838,036
Ensembl chr10:49,803,898...49,838,028
JBrowse link
G PMS2 PMS1 homolog 2, mismatch repair system component involved_in
acts_upstream_of_or_within
IEA
ISO
(PMID:11828012) Ensembl
MGI
PMID:11828012 GO_REF:0000107 NCBI chr 6:11,411,062...11,438,767
Ensembl chr 6:11,349,453...11,438,940
JBrowse link
G UNG uracil DNA glycosylase acts_upstream_of_or_within ISO (PMID:15494304) MGI PMID:15494304 NCBI chr26:17,900,354...17,911,126
Ensembl chr26:17,901,357...17,911,288
JBrowse link
somatic recombination of immunoglobulin genes involved in immune response term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G MLH1 mutL homolog 1 involved_in
acts_upstream_of_or_within
IEA
ISO
(PMID:12743174) Ensembl
MGI
PMID:12743174 GO_REF:0000107 NCBI chr23:6,889,108...6,938,117
Ensembl chr23:6,889,135...6,938,116
JBrowse link
G MSH2 mutS homolog 2 involved_in
acts_upstream_of_or_within
IEA
IBA
ISO
(PMID:12743174) Ensembl
GO_Central
MGI
PMID:12743174 GO_REF:0000033 GO_REF:0000107 NCBI chr10:49,517,448...49,594,001
Ensembl chr10:49,517,369...49,594,210
JBrowse link
spleen development term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ABL1 ABL proto-oncogene 1, non-receptor tyrosine kinase involved_in
acts_upstream_of_or_within
IEA
ISO
(PMID:2065352) Ensembl
MGI
PMID:2065352 GO_REF:0000107 NCBI chr 9:53,118,462...53,262,092
Ensembl chr 9:53,119,641...53,261,307
JBrowse link
G ADAM17 ADAM metallopeptidase domain 17 involved_in ISO (PMID:17371977) BHF-UCL PMID:17371977 NCBI chr17:6,589,874...6,638,788
Ensembl chr17:6,589,878...6,638,731
JBrowse link
G AHR aryl hydrocarbon receptor involved_in ISO (PMID:7732381), (PMID:8692887) DFLAT PMID:7732381 PMID:8692887 NCBI chr14:31,743,704...31,793,484
Ensembl chr14:31,686,170...31,791,444
JBrowse link
G BARX1 BARX homeobox 1 involved_in
acts_upstream_of_or_within
IEA
ISO
(PMID:17855428) Ensembl
MGI
PMID:17855428 GO_REF:0000107 NCBI chr 1:98,036,444...98,039,818
Ensembl chr 1:98,036,227...98,039,845
JBrowse link
G BCL2 BCL2 apoptosis regulator involved_in
acts_upstream_of_or_within
IEA
ISO
(PMID:15818405) Ensembl
MGI
PMID:15818405 GO_REF:0000107 NCBI chr 1:13,733,849...13,900,653
Ensembl chr 1:13,731,406...13,900,658
JBrowse link
G BCL2L11 BCL2 like 11 acts_upstream_of_or_within ISO (PMID:15818405) MGI PMID:15818405 NCBI chr17:35,619,804...35,665,782
Ensembl chr17:35,619,582...35,664,587
JBrowse link
G BCL3 BCL3 transcription coactivator involved_in
acts_upstream_of_or_within
IEA
ISO
(PMID:10586052) Ensembl
MGI
PMID:10586052 GO_REF:0000107 NCBI chr 1:110,620,850...110,628,830
Ensembl chr 1:110,620,827...110,654,771
JBrowse link
G CACNB4 calcium voltage-gated channel auxiliary subunit beta 4 involved_in
acts_upstream_of_or_within
IEA
ISO
(PMID:5037658) Ensembl
MGI
PMID:5037658 GO_REF:0000107 NCBI chr19:52,987,170...53,116,410
Ensembl chr19:52,993,618...53,116,140
Ensembl chr19:52,993,618...53,116,140
JBrowse link
G CDH17 cadherin 17 involved_in IEA Ensembl GO_REF:0000107 NCBI chr29:38,918,098...38,980,709
Ensembl chr29:38,918,574...38,977,217
JBrowse link
G CDKN2B cyclin dependent kinase inhibitor 2B involved_in
acts_upstream_of_or_within
IEA
ISO
(PMID:22560297) Ensembl
MGI
PMID:22560297 GO_REF:0000107 NCBI chr11:41,259,627...41,264,832 JBrowse link
G CITED2 Cbp/p300 interacting transactivator with Glu/Asp rich carboxy-terminal domain 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 1:31,522,911...31,525,342
Ensembl chr 1:31,523,799...31,524,995
JBrowse link
G COA5 cytochrome c oxidase assembly factor 5 acts_upstream_of_or_within ISO (PMID:36301669) MGI PMID:36301669 NCBI chr10:44,073,218...44,080,346
Ensembl chr10:43,931,673...44,080,347
JBrowse link
G CTC1 CST telomere replication complex component 1 involved_in
acts_upstream_of_or_within
IEA
ISO
(PMID:22531781) Ensembl
MGI
PMID:22531781 GO_REF:0000107 NCBI chr 5:33,033,474...33,055,004
Ensembl chr 5:33,033,596...33,055,142
JBrowse link
G DICER1 dicer 1, ribonuclease III acts_upstream_of_or_within ISO (PMID:21307095) MGI PMID:21307095 NCBI chr 8:63,970,245...64,029,438
Ensembl chr 8:63,972,027...64,019,879
JBrowse link
G EPB42 erythrocyte membrane protein band 4.2 involved_in
acts_upstream_of_or_within
IEA
ISO
(PMID:10359562) Ensembl
MGI
PMID:10359562 GO_REF:0000107 NCBI chr30:10,065,352...10,085,021
Ensembl chr30:10,065,469...10,084,976
JBrowse link
G FADD Fas associated via death domain involved_in IEA Ensembl GO_REF:0000107 NCBI chr18:48,087,447...48,094,497 JBrowse link
G FAM210B family with sequence similarity 210 member B acts_upstream_of_or_within
involved_in
ISO
IEA
(PMID:39000360) MGI
Ensembl
PMID:39000360 GO_REF:0000107 NCBI chr24:41,574,351...41,583,565
Ensembl chr24:41,574,327...41,588,282
JBrowse link
G FAS Fas cell surface death receptor acts_upstream_of_or_within ISO (PMID:18199416) MGI PMID:18199416 NCBI chr26:38,738,811...38,763,298
Ensembl chr26:38,737,611...38,763,321
JBrowse link
G FGF10 fibroblast growth factor 10 involved_in
acts_upstream_of_or_within
IEA
ISO
(PMID:15329346) Ensembl
MGI
PMID:15329346 GO_REF:0000107 NCBI chr 4:65,851,130...65,930,944
Ensembl chr 4:65,851,069...65,928,192
JBrowse link
G FLT3 fms related receptor tyrosine kinase 3 acts_upstream_of_or_within ISO (PMID:22674806) MGI PMID:22674806 NCBI chr25:11,551,372...11,670,891
Ensembl chr25:11,581,206...11,692,284
JBrowse link
G FLVCR1 FLVCR choline and heme transporter 1 involved_in
acts_upstream_of_or_within
IEA
ISO
(PMID:18258918) Ensembl
MGI
PMID:18258918 GO_REF:0000107 NCBI chr 7:11,001,155...11,038,910
Ensembl chr 7:11,001,101...11,035,980
JBrowse link
G HOXB4 homeobox B4 involved_in
acts_upstream_of_or_within
IEA
ISO
(PMID:14962901) Ensembl
MGI
PMID:14962901 GO_REF:0000107 NCBI chr 9:24,837,572...24,848,600
Ensembl chr 9:24,837,914...24,840,648
JBrowse link
G JARID2 jumonji and AT-rich interaction domain containing 2 involved_in
acts_upstream_of_or_within
IEA
ISO
(PMID:9376320) Ensembl
MGI
PMID:9376320 GO_REF:0000107 NCBI chr35:14,476,656...14,737,535
Ensembl chr35:14,445,914...14,736,158
JBrowse link
G KMT2A lysine methyltransferase 2A involved_in
acts_upstream_of_or_within
IEA
ISO
(PMID:22674806) Ensembl
MGI
PMID:22674806 GO_REF:0000107 NCBI chr 5:15,212,559...15,302,825
Ensembl chr 5:15,217,348...15,270,971
JBrowse link
G LIPA lipase A, lysosomal acid type acts_upstream_of_or_within ISO (PMID:19179613) MGI PMID:19179613 NCBI chr26:38,892,771...38,918,441
Ensembl chr26:38,893,337...38,918,436
JBrowse link
G LOC609557 cryptic protein acts_upstream_of_or_within ISO (PMID:10521397) MGI PMID:10521397 NCBI chr19:20,318,937...20,384,369 JBrowse link
G MYB MYB proto-oncogene, transcription factor acts_upstream_of_or_within ISO (PMID:19360001) MGI PMID:19360001 NCBI chr 1:27,908,309...27,991,984
Ensembl chr 1:27,908,364...27,991,969
JBrowse link
G NFKB2 nuclear factor kappa B subunit 2 involved_in
acts_upstream_of_or_within
IEA
ISO
(PMID:10586052) Ensembl
MGI
PMID:10586052 GO_REF:0000107 NCBI chr28:14,902,212...14,910,437
Ensembl chr28:14,902,706...14,910,395
JBrowse link
G NFKBIZ NFKB inhibitor zeta involved_in IEA Ensembl GO_REF:0000107 NCBI chr33:8,147,160...8,154,401
Ensembl chr33:8,073,840...8,154,561
JBrowse link
G NKX2-3 NK2 homeobox 3 involved_in
acts_upstream_of_or_within
IEA
ISO
(PMID:10926756)
(PMID:10207146), (PMID:10790368)
Ensembl
MGI
PMID:10207146 PMID:10790368 PMID:10926756 GO_REF:0000107 NCBI chr28:12,466,319...12,469,467
Ensembl chr28:12,466,368...12,469,473
JBrowse link
G NKX2-5 NK2 homeobox 5 involved_in
acts_upstream_of_or_within
IEA
ISO
(PMID:22560297) Ensembl
MGI
PMID:22560297 GO_REF:0000107 NCBI chr 4:39,240,755...39,254,585
Ensembl chr 4:39,244,286...39,247,592
JBrowse link
G NKX3-2 NK3 homeobox 2 involved_in
acts_upstream_of_or_within
IEA
ISO
(PMID:19208343)
(PMID:10449756), (PMID:15329346)
(PMID:10572046)
Ensembl
MGI
PMID:10449756 PMID:10572046 PMID:15329346 PMID:19208343 GO_REF:0000107 NCBI chr 3:66,543,046...66,546,779
Ensembl chr 3:66,543,046...66,545,580
JBrowse link
G NR1H3 nuclear receptor subfamily 1 group H member 3 ISO RGD PMID:17341476 RGD:401827282 NCBI chr18:42,333,173...42,346,152
Ensembl chr18:42,333,202...42,341,236
JBrowse link
G ONECUT1 one cut homeobox 1 involved_in
acts_upstream_of_or_within
IEA
ISO
(PMID:12874218) Ensembl
MGI
PMID:12874218 GO_REF:0000107 NCBI chr30:18,384,533...18,425,940
Ensembl chr30:18,387,130...18,425,497
JBrowse link
G PBX1 PBX homeobox 1 involved_in
acts_upstream_of_or_within
IEA
ISO
(PMID:15944191)
(PMID:22560297)
Ensembl
MGI
PMID:15944191 PMID:22560297 GO_REF:0000107 NCBI chr38:18,378,997...18,703,694
Ensembl chr38:18,418,093...18,703,497
JBrowse link
G PCID2 PCI domain containing 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chr22:60,602,440...60,623,811
Ensembl chr22:60,602,888...60,623,719
JBrowse link
G PITX2 paired like homeodomain 2 involved_in ISO (PMID:15475956) BHF-UCL PMID:15475956 NCBI chr32:30,710,161...30,730,162
Ensembl chr32:30,710,685...30,730,273
JBrowse link
G PKN1 protein kinase N1 involved_in
acts_upstream_of_or_within
IEA
ISO
(PMID:23223530) Ensembl
MGI
PMID:23223530 GO_REF:0000107 NCBI chr20:48,160,480...48,184,346
Ensembl chr20:48,160,529...48,184,751
JBrowse link
G POLB DNA polymerase beta involved_in
acts_upstream_of_or_within
IEA
ISO
(PMID:24388753) Ensembl
MGI
PMID:24388753 GO_REF:0000107 NCBI chr16:23,306,359...23,335,352
Ensembl chr16:23,306,367...23,335,322
JBrowse link
G PPP2R3C protein phosphatase 2 regulatory subunit B''gamma involved_in
acts_upstream_of_or_within
IEA
ISO
(PMID:16129705) Ensembl
MGI
PMID:16129705 GO_REF:0000107 NCBI chr 8:13,863,017...13,885,245
Ensembl chr 8:13,863,380...13,885,130
JBrowse link
G PRKDC protein kinase, DNA-activated, catalytic subunit ISO RGD PMID:22981234 RGD:8696027 NCBI chr29:24,904...243,926
Ensembl chr29:35,007...243,895
JBrowse link
G PSMB9 proteasome 20S subunit beta 9 ISO RGD PMID:24707720 RGD:9854625 NCBI chr12:2,432,287...2,438,920
Ensembl chr12:2,432,505...2,438,069
JBrowse link
G RBM15 RNA binding motif protein 15 involved_in
acts_upstream_of_or_within
IEA
ISO
(PMID:18981216) Ensembl
MGI
PMID:18981216 GO_REF:0000107 NCBI chr 6:41,645,765...41,653,621
Ensembl chr 6:41,645,769...41,653,799
JBrowse link
G RC3H1 ring finger and CCCH-type domains 1 involved_in
acts_upstream_of_or_within
IEA
ISO
(PMID:23583643) Ensembl
MGI
PMID:23583643 GO_REF:0000107 NCBI chr 7:25,265,836...25,312,417
Ensembl chr 7:25,233,235...25,305,174
JBrowse link
G RC3H2 ring finger and CCCH-type domains 2 involved_in
acts_upstream_of_or_within
IEA
ISO
(PMID:23583643) Ensembl
MGI
PMID:23583643 GO_REF:0000107 NCBI chr 9:59,881,889...59,943,271
Ensembl chr 9:59,881,966...59,929,341
JBrowse link
G RCBTB2 RCC1 and BTB domain containing protein 2 acts_upstream_of_or_within ISO (PMID:26291700) MGI PMID:26291700 NCBI chr22:3,018,628...3,051,059
Ensembl chr22:3,018,137...3,051,269
JBrowse link
G RIPK3 receptor interacting serine/threonine kinase 3 involved_in ISO (PMID:21876153) UniProt PMID:21876153 NCBI chr 8:4,304,167...4,309,514
Ensembl chr 8:4,305,250...4,309,325
JBrowse link
G SAMD9L sterile alpha motif domain containing 9 like acts_upstream_of_or_within ISO (PMID:24029230) MGI PMID:24029230 NCBI chr14:18,643,693...18,665,262
Ensembl chr14:18,643,998...18,648,755
JBrowse link
G SCO1 synthesis of cytochrome C oxidase 1 acts_upstream_of_or_within ISO (PMID:36301669) MGI PMID:36301669 NCBI chr 5:34,957,358...34,971,684
Ensembl chr 5:34,957,785...34,971,661
JBrowse link
G SLC40A1 solute carrier family 40 member 1 acts_upstream_of_or_within ISO (PMID:15342464) MGI PMID:15342464 NCBI chr37:308,054...329,037
Ensembl chr37:303,104...368,865
JBrowse link
G TCF21 transcription factor 21 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 1:26,856,281...26,859,654
Ensembl chr 1:26,856,587...26,859,647
JBrowse link
G TET2 tet methylcytosine dioxygenase 2 acts_upstream_of_or_within ISO (PMID:21803851) MGI PMID:21803851 NCBI chr32:26,021,745...26,145,109
Ensembl chr32:26,059,693...26,143,536
JBrowse link
G TLX1 T cell leukemia homeobox 1 acts_upstream_of_or_within ISO (PMID:11356032)
(PMID:15944191)
MGI PMID:11356032 PMID:15944191 NCBI chr28:13,807,428...13,813,875
Ensembl chr28:13,807,720...13,813,849
JBrowse link
G TRAF3IP2 TRAF3 interacting protein 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chr12:68,029,861...68,070,901
Ensembl chr12:68,030,197...68,058,518
JBrowse link
spleen trabecula formation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G SLC40A1 solute carrier family 40 member 1 acts_upstream_of_or_within ISO (PMID:15342464) MGI PMID:15342464 NCBI chr37:308,054...329,037
Ensembl chr37:303,104...368,865
JBrowse link
T cell anergy term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G CBLB Cbl proto-oncogene B involved_in
acts_upstream_of
IEA
ISO
(PMID:14973438) Ensembl
MGI
PMID:14973438 GO_REF:0000107 NCBI chr33:11,255,453...11,665,755
Ensembl chr33:11,199,863...11,530,810
JBrowse link
G CD3E CD3 epsilon subunit of T-cell receptor complex acts_upstream_of ISO (PMID:14973438) MGI PMID:14973438 NCBI chr 5:15,403,724...15,415,259
Ensembl chr 5:15,403,710...15,415,260
JBrowse link
G FOXP3 forkhead box P3 involved_in
acts_upstream_of
IEA
ISO
(PMID:16945588) Ensembl
MGI
PMID:16945588 GO_REF:0000107 NCBI chr  X:42,331,229...42,362,841
Ensembl chr  X:42,344,108...42,350,758
JBrowse link
G ITCH itchy E3 ubiquitin protein ligase involved_in
acts_upstream_of
IEA
ISO
(PMID:14973438) Ensembl
MGI
PMID:14973438 GO_REF:0000107 NCBI chr24:23,476,619...23,630,574
Ensembl chr24:23,476,736...23,627,469
JBrowse link
T cell receptor V(D)J recombination term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G BCL11B BCL11 transcription factor B involved_in
acts_upstream_of_or_within
IEA
ISO
(PMID:12717433) Ensembl
MGI
PMID:12717433 GO_REF:0000107 NCBI chr 8:67,622,592...67,713,922
Ensembl chr 8:67,622,708...67,714,404
JBrowse link
G LEF1 lymphoid enhancer binding factor 1 acts_upstream_of_or_within ISO (PMID:9462507) MGI PMID:9462507 NCBI chr32:28,516,002...28,633,759
Ensembl chr32:28,517,108...28,634,019
JBrowse link
G LIG4 DNA ligase 4 involved_in
acts_upstream_of_or_within
IEA
ISO
(PMID:10911993) Ensembl
MGI
PMID:10911993 GO_REF:0000107 NCBI chr22:56,980,333...56,987,636
Ensembl chr22:56,980,622...56,983,357
JBrowse link
G PRKDC protein kinase, DNA-activated, catalytic subunit acts_upstream_of_or_within ISO (PMID:9768755) MGI PMID:9768755 NCBI chr29:24,904...243,926
Ensembl chr29:35,007...243,895
JBrowse link
G TCF7 transcription factor 7 acts_upstream_of_or_within ISO (PMID:9462507) MGI PMID:9462507 NCBI chr11:22,313,113...22,346,221
Ensembl chr11:22,313,105...22,344,004
JBrowse link
T cell tolerance induction term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G FOXP3 forkhead box P3 involved_in
acts_upstream_of
IEA
ISO
(PMID:16945588) Ensembl
MGI
PMID:16945588 GO_REF:0000107 NCBI chr  X:42,331,229...42,362,841
Ensembl chr  X:42,344,108...42,350,758
JBrowse link
G ICOS inducible T cell costimulator involved_in ISO
IBA
RGD
GO_Central
PMID:16220623 GO_REF:0000033 RGD:1624271 NCBI chr37:12,663,839...12,735,266
Ensembl chr37:12,670,999...12,733,458
JBrowse link
thymus development term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ABL1 ABL proto-oncogene 1, non-receptor tyrosine kinase involved_in
acts_upstream_of_or_within
IEA
ISO
(PMID:2065352) Ensembl
MGI
PMID:2065352 GO_REF:0000107 NCBI chr 9:53,118,462...53,262,092
Ensembl chr 9:53,119,641...53,261,307
JBrowse link
G ADRM1 ADRM1 26S proteasome ubiquitin receptor involved_in ISO (PMID:21048919) BHF-UCL PMID:21048919 NCBI chr24:46,309,478...46,314,892
Ensembl chr24:46,275,175...46,491,347
JBrowse link
G APC APC regulator of WNT signaling pathway acts_upstream_of_or_within ISO (PMID:17002498)
(PMID:16025118)
MGI PMID:16025118 PMID:17002498 NCBI chr 3:252,052...380,506
Ensembl chr 3:253,081...322,993
JBrowse link
G ASXL1 ASXL transcriptional regulator 1 involved_in
acts_upstream_of_or_within
IEA
ISO
(PMID:19861679) Ensembl
MGI
PMID:19861679 GO_REF:0000107 NCBI chr24:21,725,126...21,804,745
Ensembl chr24:21,661,059...21,802,815
JBrowse link
G ATM ATM serine/threonine kinase involved_in
acts_upstream_of_or_within
IEA
ISO
(PMID:8843194) Ensembl
MGI
PMID:8843194 GO_REF:0000107 NCBI chr 5:24,180,129...24,297,207
Ensembl chr 5:24,182,135...24,297,207
JBrowse link
G BCL11B BCL11 transcription factor B involved_in
acts_upstream_of_or_within
IEA
ISO
(PMID:12717433) Ensembl
MGI
PMID:12717433 GO_REF:0000107 NCBI chr 8:67,622,592...67,713,922
Ensembl chr 8:67,622,708...67,714,404
JBrowse link
G BCL2 BCL2 apoptosis regulator involved_in
acts_upstream_of_or_within
IEA
ISO
(PMID:15818405)
(PMID:9241272)
Ensembl
MGI
PMID:9241272 PMID:15818405 GO_REF:0000107 NCBI chr 1:13,733,849...13,900,653
Ensembl chr 1:13,731,406...13,900,658
JBrowse link
G BCL2L11 BCL2 like 11 acts_upstream_of_or_within ISO (PMID:15818405) MGI PMID:15818405 NCBI chr17:35,619,804...35,665,782
Ensembl chr17:35,619,582...35,664,587
JBrowse link
G BRAF B-Raf proto-oncogene, serine/threonine kinase involved_in
acts_upstream_of_or_within
IEA
ISO
(PMID:18952847) Ensembl
MGI
PMID:18952847 GO_REF:0000107 NCBI chr16:8,222,909...8,318,179
Ensembl chr16:8,222,907...8,317,906
JBrowse link
G CACNB4 calcium voltage-gated channel auxiliary subunit beta 4 involved_in
acts_upstream_of_or_within
IEA
ISO
(PMID:5037658) Ensembl
MGI
PMID:5037658 GO_REF:0000107 NCBI chr19:52,987,170...53,116,410
Ensembl chr19:52,993,618...53,116,140
Ensembl chr19:52,993,618...53,116,140
JBrowse link
G CARMIL2 capping protein regulator and myosin 1 linker 2 acts_upstream_of_or_within ISO (PMID:23793062) MGI PMID:23793062 NCBI chr 5:81,792,683...81,804,274
Ensembl chr 5:81,792,155...81,804,152
JBrowse link
G CCNB2 cyclin B2 involved_in
acts_upstream_of_or_within
IEA
ISO
(PMID:9539739) Ensembl
MGI
PMID:9539739 GO_REF:0000107 NCBI chr30:24,040,859...24,063,084
Ensembl chr30:24,040,859...24,063,084
JBrowse link
G CITED2 Cbp/p300 interacting transactivator with Glu/Asp rich carboxy-terminal domain 2 involved_in
acts_upstream_of_or_within
IEA
ISO
(PMID:20549734) Ensembl
MGI
PMID:20549734 GO_REF:0000107 NCBI chr 1:31,522,911...31,525,342
Ensembl chr 1:31,523,799...31,524,995
JBrowse link
G COA5 cytochrome c oxidase assembly factor 5 acts_upstream_of_or_within ISO (PMID:36301669) MGI PMID:36301669 NCBI chr10:44,073,218...44,080,346
Ensembl chr10:43,931,673...44,080,347
JBrowse link
G CRKL CRK like proto-oncogene, adaptor protein involved_in
acts_upstream_of_or_within
IEA
ISO
(PMID:16399080) Ensembl
MGI
PMID:16399080 GO_REF:0000107 NCBI chr26:30,542,276...30,582,479
Ensembl chr26:30,545,311...30,581,964
JBrowse link
G CTC1 CST telomere replication complex component 1 involved_in
acts_upstream_of_or_within
IEA
ISO
(PMID:22531781) Ensembl
MGI
PMID:22531781 GO_REF:0000107 NCBI chr 5:33,033,474...33,055,004
Ensembl chr 5:33,033,596...33,055,142
JBrowse link
G CTNNB1 catenin beta 1 involved_in
acts_upstream_of_or_within
IEA
ISO
(PMID:16025118) Ensembl
MGI
PMID:16025118 GO_REF:0000107 NCBI chr23:10,559,722...10,572,933
Ensembl chr23:10,559,718...10,572,927
JBrowse link
G EPHB3 EPH receptor B3 involved_in IEA Ensembl GO_REF:0000107 NCBI chr34:17,422,746...17,433,769
Ensembl chr34:17,422,842...17,462,954
JBrowse link
G FADD Fas associated via death domain involved_in IEA Ensembl GO_REF:0000107 NCBI chr18:48,087,447...48,094,497 JBrowse link
G FGF10 fibroblast growth factor 10 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 4:65,851,130...65,930,944
Ensembl chr 4:65,851,069...65,928,192
JBrowse link
G FGF3 fibroblast growth factor 3 acts_upstream_of_or_within ISO (PMID:17000704) MGI PMID:17000704 NCBI chr18:48,382,819...48,388,453
Ensembl chr18:48,383,222...48,389,009
JBrowse link
G FOXE1 forkhead box E1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr11:55,143,389...55,145,954 JBrowse link
G FOXI3 forkhead box I3 involved_in ISS UniProt GO_REF:0000024 NCBI chr17:38,032,479...38,036,424
Ensembl chr17:38,032,479...38,037,630
JBrowse link
G FOXN1 forkhead box N1 acts_upstream_of_or_within
involved_in
ISO
IEA
(PMID:22072979) RGD
MGI
Ensembl
PMID:8790387 PMID:22072979 GO_REF:0000107 RGD:1300512 NCBI chr 9:42,734,228...42,749,856
Ensembl chr 9:42,735,656...42,748,632
JBrowse link
G GATA3 GATA binding protein 3 involved_in
acts_upstream_of_or_within
IEA
ISO
(PMID:17082577) Ensembl
MGI
PMID:17082577 GO_REF:0000107 NCBI chr 2:28,068,143...28,098,445
Ensembl chr 2:28,069,051...28,087,760
JBrowse link
G HAND2 heart and neural crest derivatives expressed 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chr25:24,140,496...24,143,143
Ensembl chr25:24,141,243...24,152,958
JBrowse link
G HES1 hes family bHLH transcription factor 1 involved_in IEA Ensembl GO_REF:0000107
G HNRNPK heterogeneous nuclear ribonucleoprotein K ISO RGD PMID:16488668 RGD:10002779 NCBI chr 1:75,499,334...75,511,525
Ensembl chr 1:75,499,393...75,511,425
JBrowse link
G HOXA3 homeobox A3 involved_in
acts_upstream_of_or_within
IEA
ISO
(PMID:11476574)
(PMID:7635047)
(PMID:9520319)
Ensembl
MGI
PMID:7635047 PMID:9520319 PMID:11476574 GO_REF:0000107 NCBI chr14:40,280,866...40,326,559
Ensembl chr14:40,280,861...40,296,147
JBrowse link
G IKZF1 IKAROS family zinc finger 1 acts_upstream_of_or_within ISO (PMID:7923373) MGI PMID:7923373 NCBI chr18:1,661,851...1,750,987
Ensembl chr18:1,661,690...1,770,768
JBrowse link
G JARID2 jumonji and AT-rich interaction domain containing 2 involved_in
acts_upstream_of_or_within
IEA
ISO
(PMID:9376320) Ensembl
MGI
PMID:9376320 GO_REF:0000107 NCBI chr35:14,476,656...14,737,535
Ensembl chr35:14,445,914...14,736,158
JBrowse link
G LMO4 LIM domain only 4 involved_in
acts_upstream_of_or_within
IEA
ISO
(PMID:20549734) Ensembl
MGI
PMID:20549734 GO_REF:0000107 NCBI chr 6:60,892,478...60,909,910
Ensembl chr 6:60,727,270...60,941,058
JBrowse link
G MAD1L1 mitotic arrest deficient 1 like 1 involved_in
acts_upstream_of_or_within
IEA
ISO
(PMID:11313860) Ensembl
MGI
PMID:11313860 GO_REF:0000107 NCBI chr 6:14,889,126...15,236,194
Ensembl chr 6:14,882,875...15,236,192
JBrowse link
G MAFB MAF bZIP transcription factor B involved_in
acts_upstream_of_or_within
IEA
ISO
(PMID:19164599) Ensembl
MGI
PMID:19164599 GO_REF:0000107 NCBI chr24:28,769,904...28,772,519
Ensembl chr24:28,770,944...28,774,948
JBrowse link
G MAP2K1 mitogen-activated protein kinase kinase 1 involved_in
acts_upstream_of_or_within
IEA
ISO
(PMID:18952847) Ensembl
MGI
PMID:18952847 GO_REF:0000107 NCBI chr30:30,683,192...30,760,479
Ensembl chr30:30,683,107...30,760,479
JBrowse link
G MAP2K2 mitogen-activated protein kinase kinase 2 acts_upstream_of_or_within ISO (PMID:18952847) MGI PMID:18952847 NCBI chr20:55,465,460...55,487,629
Ensembl chr20:55,465,212...55,487,641
JBrowse link
G MAPK1 mitogen-activated protein kinase 1 involved_in
acts_upstream_of_or_within
IEA
ISO
(PMID:18952847) Ensembl
MGI
PMID:18952847 GO_REF:0000107 NCBI chr26:31,013,607...31,132,998
Ensembl chr26:31,013,607...31,132,998
JBrowse link
G MAPK3 mitogen-activated protein kinase 3 acts_upstream_of_or_within ISO (PMID:18952847) MGI PMID:18952847 NCBI chr 6:18,109,184...18,115,728
Ensembl chr 6:18,109,222...18,114,425
JBrowse link
G MYB MYB proto-oncogene, transcription factor acts_upstream_of_or_within ISO (PMID:17927961) MGI PMID:17927961 NCBI chr 1:27,908,309...27,991,984
Ensembl chr 1:27,908,364...27,991,969
JBrowse link
G NFATC3 nuclear factor of activated T cells 3 acts_upstream_of_or_within ISO (PMID:9768749) MGI PMID:9768749 NCBI chr 5:81,294,656...81,434,256
Ensembl chr 5:81,296,214...81,434,250
JBrowse link
G NR1H3 nuclear receptor subfamily 1 group H member 3 ISO RGD PMID:17341476 RGD:401827282 NCBI chr18:42,333,173...42,346,152
Ensembl chr18:42,333,202...42,341,236
JBrowse link
G PAX1 paired box 1 involved_in
acts_upstream_of_or_within
IEA
ISO
(PMID:11476574) Ensembl
MGI
PMID:11476574 GO_REF:0000107 NCBI chr24:1,742,570...1,752,593
Ensembl chr24:1,743,940...1,753,185
JBrowse link
G PBX1 PBX homeobox 1 involved_in
acts_upstream_of_or_within
IEA
ISO
(PMID:15581866) Ensembl
MGI
PMID:15581866 GO_REF:0000107 NCBI chr38:18,378,997...18,703,694
Ensembl chr38:18,418,093...18,703,497
JBrowse link
G PRDX2 peroxiredoxin 2 involved_in
acts_upstream_of_or_within
IEA
ISO
(PMID:15259009) Ensembl
MGI
PMID:15259009 GO_REF:0000107 NCBI chr20:49,352,271...49,356,755
Ensembl chr20:49,352,266...49,356,682
JBrowse link
G PRKDC protein kinase, DNA-activated, catalytic subunit ISO RGD PMID:22981234 RGD:8696027 NCBI chr29:24,904...243,926
Ensembl chr29:35,007...243,895
JBrowse link
G PSEN1 presenilin 1 involved_in
acts_upstream_of_or_within
IEA
ISO
(PMID:17698590) Ensembl
MGI
PMID:17698590 GO_REF:0000107 NCBI chr 8:46,495,551...46,569,532
Ensembl chr 8:46,495,624...46,569,532
JBrowse link
G PSEN2 presenilin 2 acts_upstream_of_or_within ISO (PMID:17698590) MGI PMID:17698590 NCBI chr 7:38,147,157...38,163,023
Ensembl chr 7:38,147,173...38,166,722
JBrowse link
G PSMB9 proteasome 20S subunit beta 9 ISO RGD PMID:18457575 RGD:9850287 NCBI chr12:2,432,287...2,438,920
Ensembl chr12:2,432,505...2,438,069
JBrowse link
G RAF1 Raf-1 proto-oncogene, serine/threonine kinase involved_in
acts_upstream_of_or_within
IEA
ISO
(PMID:18952847) Ensembl
MGI
PMID:18952847 GO_REF:0000107 NCBI chr20:5,892,839...5,972,672
Ensembl chr20:5,892,834...5,972,090
JBrowse link
G RAG1 recombination activating 1 involved_in
acts_upstream_of_or_within
IEA
ISO
(PMID:18684012) Ensembl
MGI
PMID:18684012 GO_REF:0000107 NCBI chr18:31,628,231...31,639,980
Ensembl chr18:31,630,737...31,641,660
JBrowse link
G RIPK3 receptor interacting serine/threonine kinase 3 involved_in ISO (PMID:21876153) UniProt PMID:21876153 NCBI chr 8:4,304,167...4,309,514
Ensembl chr 8:4,305,250...4,309,325
JBrowse link
G SCO1 synthesis of cytochrome C oxidase 1 acts_upstream_of_or_within ISO (PMID:36301669) MGI PMID:36301669 NCBI chr 5:34,957,358...34,971,684
Ensembl chr 5:34,957,785...34,971,661
JBrowse link
G SHH sonic hedgehog signaling molecule involved_in IEA Ensembl GO_REF:0000107 NCBI chr16:18,650,553...18,663,571
Ensembl chr16:18,484,809...18,662,903
JBrowse link
G SIX1 SIX homeobox 1 involved_in
acts_upstream_of_or_within
IEA
ISO
ISS
(PMID:16530750) Ensembl
MGI
UniProt
PMID:16530750 GO_REF:0000024 GO_REF:0000107 NCBI chr 8:35,676,705...35,679,534
Ensembl chr 8:35,676,479...35,679,534
JBrowse link
G SIX4 SIX homeobox 4 involved_in
acts_upstream_of_or_within
IEA
ISO
(PMID:16530750) Ensembl
MGI
PMID:16530750 GO_REF:0000107 NCBI chr 8:35,735,893...35,748,976
Ensembl chr 8:35,737,058...35,748,893
JBrowse link
G SLC46A2 solute carrier family 46 member 2 acts_upstream_of_or_within
involved_in
ISO
IEA
(PMID:18684012) MGI
Ensembl
PMID:18684012 GO_REF:0000107 NCBI chr11:67,297,596...67,305,893
Ensembl chr11:67,297,597...67,305,893
JBrowse link
G SRF serum response factor involved_in
acts_upstream_of_or_within
IEA
ISO
(PMID:18952847) Ensembl
MGI
PMID:18952847 GO_REF:0000107 NCBI chr12:11,664,441...11,673,846
Ensembl chr12:11,664,527...11,671,533
JBrowse link
G TBX1 T-box transcription factor 1 involved_in
acts_upstream_of_or_within
ISO (PMID:14585638)
(PMID:31412026)
(PMID:17916582)
UniProt
MGI
PMID:14585638 PMID:17916582 PMID:31412026 NCBI chr26:29,529,071...29,533,240
Ensembl chr26:29,528,878...29,532,784
JBrowse link
G TGFBR1 transforming growth factor beta receptor 1 involved_in
acts_upstream_of_or_within
IEA
ISO
(PMID:17078885) Ensembl
MGI
PMID:17078885 GO_REF:0000107 NCBI chr11:56,191,383...56,223,042
Ensembl chr11:56,161,772...56,218,594
JBrowse link
G TYR tyrosinase involved_in
acts_upstream_of_or_within
IEA
ISO
(PMID:10890980) Ensembl
MGI
PMID:10890980 GO_REF:0000107 NCBI chr21:10,799,940...10,894,187
Ensembl chr21:10,799,940...10,894,191
JBrowse link
G ZBTB1 zinc finger and BTB domain containing 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 8:38,933,721...38,959,306
Ensembl chr 8:38,933,805...38,959,306
JBrowse link
G ZMPSTE24 zinc metallopeptidase STE24 involved_in
acts_upstream_of_or_within
IEA
ISO
(PMID:11923874) Ensembl
MGI
PMID:11923874 GO_REF:0000107 NCBI chr15:2,669,546...2,708,480
Ensembl chr15:2,670,326...2,709,160
JBrowse link
thymus epithelium morphogenesis term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G AIRE autoimmune regulator involved_in IEA
IBA
Ensembl
GO_Central
GO_REF:0000033 GO_REF:0000107 NCBI chr31:38,139,513...38,149,294
Ensembl chr31:38,139,099...38,149,296
JBrowse link
G FOXN1 forkhead box N1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 9:42,734,228...42,749,856
Ensembl chr 9:42,735,656...42,748,632
JBrowse link
tolerance induction term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G C3 complement C3 ISO RGD PMID:16555329 RGD:5129541 NCBI chr20:53,566,226...53,598,365
Ensembl chr20:53,566,261...53,598,761
JBrowse link
G CCR4 C-C motif chemokine receptor 4 acts_upstream_of_or_within
involved_in
ISO
IEA
(PMID:15809349) MGI
Ensembl
PMID:15809349 GO_REF:0000107 NCBI chr23:3,844,072...3,847,770
Ensembl chr23:3,844,173...3,845,255
JBrowse link
G FOXP3 forkhead box P3 involved_in
acts_upstream_of_or_within
IEA
ISO
(PMID:15809349) Ensembl
MGI
PMID:15809349 GO_REF:0000107 NCBI chr  X:42,331,229...42,362,841
Ensembl chr  X:42,344,108...42,350,758
JBrowse link
G LOC484306 leukocyte immunoglobulin-like receptor subfamily B member 3 involved_in ISO (PMID:18420485), (PMID:20935202) ARUK-UCL PMID:18420485 PMID:20935202 NCBI chr 1:102,779,562...102,786,924 JBrowse link
tolerance induction to lipopolysaccharide term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ACOD1 aconitate decarboxylase 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr22:30,545,991...30,557,199
Ensembl chr22:30,547,271...30,555,510
JBrowse link
G TNFAIP3 TNF alpha induced protein 3 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 1:30,247,432...30,262,992
Ensembl chr 1:30,251,059...30,261,001
JBrowse link
tolerance induction to nonself antigen term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G C3AR1 complement C3a receptor 1 ISO RGD PMID:12514742 RGD:5129547 NCBI chr27:37,431,745...37,439,858
Ensembl chr27:37,433,792...37,435,246
JBrowse link
tolerance induction to self antigen term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G B9D2 B9 domain containing 2 acts_upstream_of_or_within ISO (PMID:17481928) MGI PMID:17481928 NCBI chr 1:112,621,832...112,627,726
Ensembl chr 1:112,621,633...112,643,885
JBrowse link
G FOXP3 forkhead box P3 involved_in
acts_upstream_of_or_within
IEA
ISO
(PMID:15780990) Ensembl
MGI
PMID:15780990 GO_REF:0000107 NCBI chr  X:42,331,229...42,362,841
Ensembl chr  X:42,344,108...42,350,758
JBrowse link
G LYN LYN proto-oncogene, Src family tyrosine kinase involved_in IEA
IBA
Ensembl
GO_Central
GO_REF:0000033 GO_REF:0000107 NCBI chr29:7,367,617...7,448,862
Ensembl chr29:7,332,684...7,448,507
JBrowse link
G TGFB1 transforming growth factor beta 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 1:112,629,476...112,643,885
Ensembl chr 1:112,621,633...112,643,885
JBrowse link
G XKR8 XK related 8 involved_in
acts_upstream_of_or_within
IEA
ISO
(PMID:29440417) Ensembl
MGI
PMID:29440417 GO_REF:0000107 NCBI chr 2:72,419,950...72,426,315
Ensembl chr 2:72,418,872...72,450,737
JBrowse link
V(D)J recombination term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ATM ATM serine/threonine kinase involved_in
acts_upstream_of_or_within
IEA
ISO
(PMID:23836881) Ensembl
MGI
PMID:23836881 GO_REF:0000107 NCBI chr 5:24,180,129...24,297,207
Ensembl chr 5:24,182,135...24,297,207
JBrowse link
G DCAF1 DDB1 and CUL4 associated factor 1 involved_in ISO (PMID:22157821) UniProt PMID:22157821 NCBI chr20:38,109,974...38,187,621
Ensembl chr20:38,125,078...38,187,107
JBrowse link
G DCLRE1C DNA cross-link repair 1C involved_in
acts_upstream_of_or_within
IEA
ISO
(PMID:23836881) Ensembl
MGI
PMID:23836881 GO_REF:0000107 NCBI chr 2:21,688,822...21,725,021
Ensembl chr 2:21,688,766...21,724,248
JBrowse link
G HMGB1 high mobility group box 1 involved_in ISO (PMID:9166431) UniProt PMID:9166431 NCBI chr25:9,431,223...9,558,167
Ensembl chr25:9,431,218...9,558,165
JBrowse link
G LIG1 DNA ligase 1 NOT|involved_in ISO (PMID:9809069) UniProt PMID:9809069 NCBI chr 1:108,105,523...108,143,954
Ensembl chr 1:108,105,987...108,143,953
JBrowse link
G LIG3 DNA ligase 3 NOT|involved_in ISO (PMID:9809069) UniProt PMID:9809069 NCBI chr 9:38,346,275...38,366,634
Ensembl chr 9:38,346,199...38,366,193
JBrowse link
G LIG4 DNA ligase 4 involved_in
acts_upstream_of_or_within
IEA
ISO
(PMID:10716994)
(PMID:15194694)
Ensembl
MGI
PMID:10716994 PMID:15194694 GO_REF:0000107 NCBI chr22:56,980,333...56,987,636
Ensembl chr22:56,980,622...56,983,357
JBrowse link
G PRKDC protein kinase, DNA-activated, catalytic subunit acts_upstream_of_or_within ISO (PMID:23836881) MGI PMID:23836881 NCBI chr29:24,904...243,926
Ensembl chr29:35,007...243,895
JBrowse link
G RAG1 recombination activating 1 involved_in
acts_upstream_of_or_within
IEA
IBA
ISO
(PMID:2360047) UniProt
GO_Central
MGI
Ensembl
InterPro
PMID:2360047 GO_REF:0000002 GO_REF:0000033 GO_REF:0000104 GO_REF:0000107 NCBI chr18:31,628,231...31,639,980
Ensembl chr18:31,630,737...31,641,660
JBrowse link
G RAG2 recombination activating 2 involved_in
acts_upstream_of_or_within
IEA
IBA
ISO
(PMID:2360047) Ensembl
GO_Central
MGI
PMID:2360047 GO_REF:0000033 GO_REF:0000107 NCBI chr18:31,614,143...31,621,489
Ensembl chr18:31,618,481...31,620,064
JBrowse link
G XRCC4 X-ray repair cross complementing 4 acts_upstream_of_or_within ISO (PMID:10716994) MGI PMID:10716994 NCBI chr 3:24,316,598...24,547,463
Ensembl chr 3:24,269,974...24,533,465
JBrowse link
G XRCC6 X-ray repair cross complementing 6 acts_upstream_of_or_within ISO (PMID:10716994) MGI PMID:10716994 NCBI chr10:23,637,905...23,661,618
Ensembl chr10:23,638,237...23,661,480
JBrowse link

Term paths to the root
Path 1
Term Annotations click to browse term
  biological_process 22098
    immune system process 2635
      immune system development 241
        hematopoietic or lymphoid organ development + 133
        somatic diversification of immune receptors + 88
        tolerance induction + 32
Path 2
Term Annotations click to browse term
  biological_process 22098
    developmental process 6891
      anatomical structure development 6453
        multicellular organism development 5225
          system development 4548
            immune system development 241
              hematopoietic or lymphoid organ development + 133
              somatic diversification of immune receptors + 88
              tolerance induction + 32
paths to the root