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ONTOLOGY REPORT - ANNOTATIONS

Term:T cell mediated immunity
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Accession:GO:0002456 term browser browse the term
Definition:Any process involved in the carrying out of an immune response by a T cell.
Synonyms:exact_synonym: T lymphocyte mediated immunity
 broad_synonym: cell-mediated immunity;   cellular immune response


show annotations for term's descendants           Sort by:
T cell mediated immunity term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G CD46 CD46 molecule involved_in ISO (PMID:23086448) UniProt PMID:23086448 NCBI chr 1:183,330,423...183,373,916
Ensembl chr 1:188,031,758...188,182,046 		JBrowse link
G CD70 CD70 molecule involved_in IEA Ensembl GO_REF:0000107 NCBI chr19:5,615,056...5,621,055
Ensembl chr19:6,535,559...6,542,310 		JBrowse link
G CD8A CD8 subunit alpha acts_upstream_of_or_within
involved_in 		ISO
IEA 		(PMID:1673361) MGI
TreeGrafter		 PMID:1673361 GO_REF:0000118 NCBI chr2A:86,832,559...86,855,772
Ensembl chr2A:88,377,722...88,382,635 		JBrowse link
G CDH17 cadherin 17 NOT|involved_in ISO (PMID:15688343) UniProt PMID:15688343 NCBI chr 8:90,750,904...90,818,629
Ensembl chr 8:92,696,182...92,760,732 		JBrowse link
G CLEC4G C-type lectin domain family 4 member G acts_upstream_of IEA Ensembl GO_REF:0000107 NCBI chr19:7,015,848...7,019,396
Ensembl chr19:7,870,730...7,873,631 		JBrowse link
G EPHB6 EPH receptor B6 acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr 7:134,845,936...134,862,114
Ensembl chr 7:147,337,558...147,353,575 		JBrowse link
G FOXP3 forkhead box P3 acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr  X:41,550,462...41,567,492
Ensembl chr  X:49,402,652...49,417,029 		JBrowse link
G JAG1 jagged canonical Notch ligand 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr20:10,582,234...10,618,507
Ensembl chr20:10,582,094...10,618,383 		JBrowse link
G LOC100976925 butyrophilin subfamily 3 member A3 involved_in ISO (PMID:22767497) UniProt PMID:22767497 NCBI chr 6:26,272,923...26,285,821 JBrowse link
G LYST lysosomal trafficking regulator acts_upstream_of_or_within ISO (PMID:6977094) MGI PMID:6977094 NCBI chr 1:211,229,800...211,451,947
Ensembl chr 1:216,231,824...216,436,293 		JBrowse link
G MYO1G myosin IG involved_in IEA Ensembl GO_REF:0000107 NCBI chr 7:45,676,225...45,693,013
Ensembl chr 7:45,740,036...45,759,819 		JBrowse link
G NFKBIZ NFKB inhibitor zeta involved_in IEA Ensembl GO_REF:0000107 NCBI chr 3:98,914,957...98,948,467
Ensembl chr 3:105,616,645...105,628,300 		JBrowse link
cytotoxic T cell degranulation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G RAB27A RAB27A, member RAS oncogene family acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr15:34,174,491...34,263,045
Ensembl chr15:52,498,202...52,529,984 		JBrowse link
G STX11 syntaxin 11 acts_upstream_of_or_within ISO (PMID:23042080), (PMID:23190531) MGI PMID:23042080 PMID:23190531 NCBI chr 6:141,924,656...141,974,579
Ensembl chr 6:146,688,670...146,689,533 		JBrowse link
negative regulation of cytotoxic T cell degranulation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G CEACAM1 CEA cell adhesion molecule 1 involved_in ISO (PMID:18424730) UniProt PMID:18424730 NCBI chr19:39,395,550...39,417,063
Ensembl chr19:47,989,430...48,008,739 		JBrowse link
G NCKAP1L NCK associated protein 1 like involved_in IEA Ensembl GO_REF:0000107 NCBI chr12:34,200,102...34,249,873
Ensembl chr12:34,932,470...34,977,881 		JBrowse link
negative regulation of T cell cytokine production term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G FOXP3 forkhead box P3 involved_in IEA Ensembl GO_REF:0000107 NCBI chr  X:41,550,462...41,567,492
Ensembl chr  X:49,402,652...49,417,029 		JBrowse link
G HFE homeostatic iron regulator involved_in IEA Ensembl GO_REF:0000107 NCBI chr 6:25,921,663...25,930,852
Ensembl chr 6:26,580,358...26,588,591 		JBrowse link
G LILRB4 leukocyte immunoglobulin like receptor B4 involved_in ISO (PMID:18420485) ARUK-UCL PMID:18420485 NCBI chr19:51,606,681...51,612,751 JBrowse link
G LOC100978457 patr class I histocompatibility antigen, CH28 alpha chain involved_in IEA Ensembl GO_REF:0000107 NCBI chr 6:29,523,929...29,529,385
Ensembl chr 6:30,181,133...30,186,082 		JBrowse link
G LOC100978961 lymphotactin involved_in ISO (PMID:10887101) BHF-UCL PMID:10887101 NCBI chr 1:143,837,578...144,068,261
Ensembl chr 1:147,785,654...147,790,587 		JBrowse link
G SLAMF1 signaling lymphocytic activation molecule family member 1 involved_in ISO (PMID:11477403) UniProt PMID:11477403 NCBI chr 1:135,963,748...136,002,982
Ensembl chr 1:139,888,772...139,925,461 		JBrowse link
G SMAD7 SMAD family member 7 involved_in ISO (PMID:25642768) BHF-UCL PMID:25642768 NCBI chr18:42,306,324...42,337,214 JBrowse link
G VSIR V-set immunoregulatory receptor acts_upstream_of_or_within ISO (PMID:21383057) MGI PMID:21383057 NCBI chr10:68,218,230...68,243,687
Ensembl chr10:70,742,062...70,767,613 		JBrowse link
negative regulation of T cell mediated cytotoxicity term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G CEACAM1 CEA cell adhesion molecule 1 involved_in ISO (PMID:18424730) UniProt PMID:18424730 NCBI chr19:39,395,550...39,417,063
Ensembl chr19:47,989,430...48,008,739 		JBrowse link
G IL7R interleukin 7 receptor acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr 5:74,489,188...74,516,330
Ensembl chr 5:79,769,859...79,792,612 		JBrowse link
G KLRD1 killer cell lectin like receptor D1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr12:10,277,685...10,364,056
Ensembl chr12:10,598,705...10,606,547 		JBrowse link
G LOC100978774 patr class I histocompatibility antigen, alpha chain G involved_in IEA Ensembl GO_REF:0000107 NCBI chr 6:29,616,091...29,620,270
Ensembl chr 6:30,286,395...30,390,865 		JBrowse link
G LOC100990924 NKG2-A/NKG2-B type II integral membrane protein involved_in IEA Ensembl
TreeGrafter		 GO_REF:0000107 GO_REF:0000118 NCBI chr12:10,469,351...10,576,060
Ensembl chr12:10,720,723...10,744,046 		JBrowse link
G LOC103783591 leukocyte immunoglobulin-like receptor subfamily B member 1 involved_in ISO (PMID:21213105) UniProt PMID:21213105 NCBI chr19:51,561,376...51,578,564 JBrowse link
G PPP3CB protein phosphatase 3 catalytic subunit beta acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr10:69,984,241...70,043,352
Ensembl chr10:72,443,051...72,501,752 		JBrowse link
G PTPRC protein tyrosine phosphatase receptor type C involved_in IEA Ensembl GO_REF:0000107 NCBI chr 1:174,246,389...174,364,893
Ensembl chr 1:178,556,104...178,672,994 		JBrowse link
negative regulation of T cell mediated cytotoxicity directed against tumor cell target term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G MUC4 mucin 4, cell surface associated ISO RGD PMID:10232613 RGD:2303754 NCBI chr 3:193,050,895...193,114,931 JBrowse link
negative regulation of T cell mediated immune response to tumor cell term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G AHR aryl hydrocarbon receptor involved_in IEA Ensembl GO_REF:0000107 NCBI chr 7:17,949,254...17,998,737
Ensembl chr 7:17,278,637...17,326,171 		JBrowse link
G CD274 CD274 molecule involved_in IEA Ensembl GO_REF:0000107 NCBI chr 9:5,269,270...5,289,629
Ensembl chr 9:5,454,391...5,474,402 		JBrowse link
G IL4I1 interleukin 4 induced 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr19:46,902,656...46,942,213
Ensembl chr19:55,819,080...55,858,389 		JBrowse link
G MAPK3 mitogen-activated protein kinase 3 involved_in ISO (PMID:37208329) UniProt PMID:37208329 Ensembl chr16:30,489,362...30,498,017 JBrowse link
G PDCD1 programmed cell death 1 involved_in ISO (PMID:38377992) UniProt PMID:38377992 NCBI chr12:130,849,353...130,858,776 JBrowse link
G UFL1 UFM1 specific ligase 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 6:94,356,440...94,389,920
Ensembl chr 6:98,242,756...98,274,377 		JBrowse link
G USP5 ubiquitin specific peptidase 5 involved_in ISO (PMID:37208329) UniProt PMID:37208329 NCBI chr12:6,983,941...6,998,469
Ensembl chr12:6,895,416...6,909,936 		JBrowse link
negative regulation of T cell mediated immunity term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G CD80 CD80 molecule involved_in IEA Ensembl GO_REF:0000107 NCBI chr 3:116,646,590...116,683,725
Ensembl chr 3:123,559,559...123,594,870 		JBrowse link
G CLEC4G C-type lectin domain family 4 member G acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr19:7,015,848...7,019,396
Ensembl chr19:7,870,730...7,873,631 		JBrowse link
G DUSP22 dual specificity phosphatase 22 acts_upstream_of_or_within ISO (PMID:24714587) MGI PMID:24714587 NCBI chr 6:107,145...180,777
Ensembl chr 6:242,121...301,248 		JBrowse link
G NOD2 nucleotide binding oligomerization domain containing 2 acts_upstream_of_or_within ISO (PMID:16949315) MGI PMID:16949315 NCBI chr16:30,955,976...30,995,451
Ensembl chr16:49,837,891...49,873,773 		JBrowse link
negative regulation of T-helper 2 cell cytokine production term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ARG1 arginase 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 6:129,372,747...129,383,880
Ensembl chr 6:133,479,966...133,491,162 		JBrowse link
G IFNB1 interferon beta 1 involved_in ISO (PMID:20554961) UniProt PMID:20554961 NCBI chr 9:20,884,742...20,886,317 JBrowse link
G LOC100972354 interferon alpha-2 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 9:21,245,017...21,246,210
Ensembl chr 9:21,863,062...21,863,736 		JBrowse link
G TBX21 T-box transcription factor 21 involved_in IEA Ensembl GO_REF:0000107 NCBI chr17:9,791,008...9,803,894
Ensembl chr17:9,973,920...9,985,660 		JBrowse link
negative regulation of type IV hypersensitivity term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G IL20RB interleukin 20 receptor subunit beta acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr 3:133,995,863...134,045,206
Ensembl chr 3:141,474,161...141,504,744 		JBrowse link
G SPN sialophorin acts_upstream_of_or_within ISO (PMID:9645617) MGI PMID:9645617 Ensembl chr16:30,035,243...30,036,445 JBrowse link
peripheral T cell tolerance induction term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G AIRE autoimmune regulator involved_in IEA Ensembl GO_REF:0000107 NCBI chr21:30,543,018...30,556,225
Ensembl chr21:43,837,340...43,848,974 		JBrowse link
positive regulation of peripheral T cell tolerance induction term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G FOXP3 forkhead box P3 acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr  X:41,550,462...41,567,492
Ensembl chr  X:49,402,652...49,417,029 		JBrowse link
positive regulation of T cell cytokine production term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G B2M beta-2-microglobulin involved_in IEA Ensembl GO_REF:0000107 NCBI chr15:23,668,108...23,674,791
Ensembl chr15:41,836,345...41,842,991 		JBrowse link
G CD55 CD55 molecule (Cromer blood group) involved_in ISO (PMID:16818763) UniProt PMID:16818763 NCBI chr 1:182,923,369...182,962,518
Ensembl chr 1:187,201,081...187,240,350 		JBrowse link
G CD7 CD7 molecule involved_in IEA Ensembl GO_REF:0000107 NCBI chr17:76,724,313...76,727,998
Ensembl chr17:82,535,558...82,537,847 		JBrowse link
G FZD5 frizzled class receptor 5 involved_in IEA Ensembl GO_REF:0000107 NCBI chr2B:95,003,246...95,010,577
Ensembl chr2B:213,133,017...213,134,774 		JBrowse link
G LOC100978961 lymphotactin involved_in ISO (PMID:9029087) BHF-UCL PMID:9029087 NCBI chr 1:143,837,578...144,068,261
Ensembl chr 1:147,785,654...147,790,587 		JBrowse link
G MALT1 MALT1 paracaspase involved_in IEA Ensembl GO_REF:0000107 NCBI chr18:52,060,878...52,141,985
Ensembl chr18:55,395,462...55,473,574 		JBrowse link
G MAP3K7 mitogen-activated protein kinase kinase kinase 7 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 6:88,398,329...88,470,926
Ensembl chr 6:91,664,263...91,737,468 		JBrowse link
G SASH3 SAM and SH3 domain containing 3 acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr  X:118,909,980...118,924,779
Ensembl chr  X:129,207,049...129,222,342 		JBrowse link
G SECTM1 secreted and transmembrane 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr17:76,730,203...76,742,921
Ensembl chr17:82,540,829...82,553,688 		JBrowse link
G TNFSF4 TNF superfamily member 4 involved_in ISO (PMID:18354165), (PMID:9670042) BHF-UCL PMID:9670042 PMID:18354165 NCBI chr 1:148,684,689...148,989,775
Ensembl chr 1:152,391,450...152,415,845
Ensembl chr 1:152,391,450...152,415,845 		JBrowse link
G TRAF2 TNF receptor associated factor 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 9:107,938,935...107,984,797
Ensembl chr 9:136,917,358...136,955,331 		JBrowse link
G TRAF6 TNF receptor associated factor 6 involved_in IEA Ensembl GO_REF:0000107 NCBI chr11:36,457,633...36,483,616
Ensembl chr11:36,335,609...36,356,334 		JBrowse link
positive regulation of T cell mediated cytotoxicity term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G B2M beta-2-microglobulin acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr15:23,668,108...23,674,791
Ensembl chr15:41,836,345...41,842,991 		JBrowse link
G CD1A CD1a molecule involved_in IEA TreeGrafter GO_REF:0000118 NCBI chr 1:133,574,983...133,617,542
Ensembl chr 1:137,403,872...137,407,057 		JBrowse link
G CD1B CD1b molecule involved_in IEA TreeGrafter GO_REF:0000118 NCBI chr 1:133,686,155...133,689,732
Ensembl chr 1:137,476,898...137,480,471 		JBrowse link
G CD1C CD1c molecule involved_in IEA TreeGrafter GO_REF:0000118 NCBI chr 1:133,647,482...133,651,575
Ensembl chr 1:137,437,235...137,441,075 		JBrowse link
G CD1D CD1d molecule acts_upstream_of_or_within
involved_in 		ISO
IEA 		(PMID:10201995) MGI
TreeGrafter		 PMID:10201995 GO_REF:0000118 NCBI chr 1:133,549,258...133,557,752
Ensembl chr 1:137,341,690...137,348,173 		JBrowse link
G CYRIB CYFIP related Rac1 interactor B involved_in IEA Ensembl GO_REF:0000107 NCBI chr 8:126,478,020...126,653,936
Ensembl chr 8:129,209,655...129,272,844 		JBrowse link
G FADD Fas associated via death domain involved_in ISO (PMID:21876153) UniProt PMID:21876153 NCBI chr11:65,300,889...65,305,020 JBrowse link
G HSPA1B heat shock protein family A (Hsp70) member 1B ISO prevention of heat shock-induced resistance to CTL-mediated killing RGD PMID:10679071 RGD:1298959 NCBI chr 6:31,488,882...31,491,412 JBrowse link
G HSPA8 heat shock protein family A (Hsp70) member 8 ISO RGD PMID:8871636 RGD:10059395 NCBI chr11:117,890,545...117,895,262
Ensembl chr11:121,809,800...121,815,773 		JBrowse link
G IL12A interleukin 12A involved_in IEA Ensembl GO_REF:0000107 NCBI chr 3:157,011,675...157,019,897
Ensembl chr 3:165,061,505...165,068,666 		JBrowse link
G IL12B interleukin 12B involved_in IEA Ensembl GO_REF:0000107 NCBI chr 5:154,706,467...154,722,231
Ensembl chr 5:161,325,303...161,335,381 		JBrowse link
G IL23A interleukin 23 subunit alpha involved_in IEA Ensembl GO_REF:0000107 NCBI chr12:32,575,321...32,576,856
Ensembl chr12:32,828,902...32,830,617 		JBrowse link
G LOC100977055 patr class I histocompatibility antigen, alpha chain E involved_in
acts_upstream_of_or_within 		IEA
ISO 		(PMID:1538753) Ensembl
TreeGrafter
MGI		 PMID:1538753 GO_REF:0000107 GO_REF:0000118 NCBI chr 6:30,233,293...30,238,056
Ensembl chr 6:31,101,251...31,107,262 		JBrowse link
G LOC100978457 patr class I histocompatibility antigen, CH28 alpha chain involved_in IEA Ensembl
TreeGrafter		 GO_REF:0000107 GO_REF:0000118 NCBI chr 6:29,523,929...29,529,385
Ensembl chr 6:30,181,133...30,186,082 		JBrowse link
G LOC100978774 patr class I histocompatibility antigen, alpha chain G involved_in IEA TreeGrafter GO_REF:0000118 NCBI chr 6:29,616,091...29,620,270
Ensembl chr 6:30,286,395...30,390,865 		JBrowse link
G LOC100978961 lymphotactin involved_in ISO (PMID:18832695) BHF-UCL PMID:18832695 NCBI chr 1:143,837,578...144,068,261
Ensembl chr 1:147,785,654...147,790,587 		JBrowse link
G LOC100979338 putative HLA class I histocompatibility antigen, alpha chain H involved_in IEA TreeGrafter GO_REF:0000118 NCBI chr 6:29,663,779...29,667,352
Ensembl chr 6:30,333,360...30,391,211 		JBrowse link
G LOC100980965 zinc-alpha-2-glycoprotein involved_in IEA TreeGrafter GO_REF:0000118 NCBI chr 7:91,999,717...92,009,066
Ensembl chr 7:105,432,782...105,442,219 		JBrowse link
G LOC100982294 class I histocompatibility antigen, Gogo-C*0202 alpha chain involved_in IEA TreeGrafter GO_REF:0000118 NCBI chr 6:31,020,373...31,024,959
Ensembl chr 6:31,910,788...31,914,286 		JBrowse link
G LOC100982859 class I histocompatibility antigen, Gogo-B*0101 alpha chain involved_in IEA TreeGrafter
Ensembl		 GO_REF:0000107 GO_REF:0000118 NCBI chr 6:31,106,562...31,109,933
Ensembl chr 6:31,997,381...32,000,067 		JBrowse link
G LOC100985629 UL16-binding protein 2 involved_in IEA TreeGrafter GO_REF:0000118 NCBI chr 6:147,744,025...147,751,795 JBrowse link
G LOC100985794 T-cell surface glycoprotein CD1e, membrane-associated involved_in IEA TreeGrafter GO_REF:0000118 NCBI chr 1:133,712,012...133,716,093
Ensembl chr 1:137,502,315...137,506,799 		JBrowse link
G LOC100987081 HLA class II histocompatibility antigen, DR alpha chain involved_in IEA Ensembl GO_REF:0000107 NCBI chr 6:32,105,421...32,110,579
Ensembl chr 6:32,982,228...32,987,417 		JBrowse link
G LOC100988536 UL-16 binding protein 5 involved_in IEA TreeGrafter GO_REF:0000118 NCBI chr 6:147,719,511...147,725,765
Ensembl chr 6:152,424,827...152,430,940 		JBrowse link
G MHC-A patr class I histocompatibility antigen, A-2 alpha chain-like involved_in IEA TreeGrafter GO_REF:0000118 NCBI chr 6:29,718,578...29,721,648
Ensembl chr 6:30,333,360...30,391,211 		JBrowse link
G P2RX7 purinergic receptor P2X 7 acts_upstream_of_or_within ISO (PMID:14761980) MGI PMID:14761980 NCBI chr12:118,731,761...118,786,039
Ensembl chr12:122,102,888...122,154,068 		JBrowse link
G PTPRC protein tyrosine phosphatase receptor type C acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr 1:174,246,389...174,364,893
Ensembl chr 1:178,556,104...178,672,994 		JBrowse link
G RAET1E retinoic acid early transcript 1E involved_in IEA TreeGrafter GO_REF:0000118 NCBI chr 6:147,695,601...147,703,327
Ensembl chr 6:152,400,887...152,408,583 		JBrowse link
G RAET1L retinoic acid early transcript 1L involved_in IEA TreeGrafter GO_REF:0000118 NCBI chr 6:147,831,368...147,836,716 JBrowse link
G STX7 syntaxin 7 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 6:130,232,041...130,289,326
Ensembl chr 6:134,342,304...134,398,215 		JBrowse link
G TAP2 transporter 2, ATP binding cassette subfamily B member acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr 6:32,394,586...32,408,297
Ensembl chr 6:33,507,332...33,523,750 		JBrowse link
G ULBP1 UL16 binding protein 1 involved_in IEA TreeGrafter GO_REF:0000118 NCBI chr 6:147,798,494...147,811,888
Ensembl chr 6:152,477,350...152,486,911 		JBrowse link
G ULBP3 UL16 binding protein 3 involved_in IEA TreeGrafter GO_REF:0000118 NCBI chr 6:147,875,098...147,882,746
Ensembl chr 6:152,581,662...152,588,430 		JBrowse link
positive regulation of T cell mediated cytotoxicity directed against tumor cell target term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G LOC100972084 major histocompatibility complex class I-related gene protein involved_in IEA Ensembl GO_REF:0000107 NCBI chr 1:156,510,588...156,538,447
Ensembl chr 1:160,178,106...160,198,420 		JBrowse link
positive regulation of T cell mediated immune response to tumor cell term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G FBXO38 F-box protein 38 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 5:143,814,446...143,873,919
Ensembl chr 5:149,834,109...149,881,903 		JBrowse link
G HSPD1 heat shock protein family D (Hsp60) member 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr2B:84,729,615...84,743,352
Ensembl chr2B:202,623,497...202,636,959 		JBrowse link
G KLHL22 kelch like family member 22 involved_in IEA Ensembl GO_REF:0000107 Ensembl chr22:19,122,875...19,174,842 JBrowse link
G LOC100982539 signal transducer CD24 acts_upstream_of_or_within ISO (PMID:7774619) MGI PMID:7774619 NCBI chr 6:104,783,720...104,789,509
Ensembl chr 6:108,655,624...108,657,847 		JBrowse link
G PRKAA1 protein kinase AMP-activated catalytic subunit alpha 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 5:69,581,748...69,620,721
Ensembl chr 5:74,627,830...74,666,505 		JBrowse link
G YWHAG tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein gamma involved_in ISO (PMID:38377992) UniProt PMID:38377992 NCBI chr 7:67,661,589...67,693,814 JBrowse link
positive regulation of T cell mediated immunity term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G PTPRC protein tyrosine phosphatase receptor type C acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr 1:174,246,389...174,364,893
Ensembl chr 1:178,556,104...178,672,994 		JBrowse link
G ZBTB1 zinc finger and BTB domain containing 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr14:45,085,146...45,114,965
Ensembl chr14:63,354,458...63,359,403 		JBrowse link
positive regulation of T-helper 1 cell cytokine production term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ARID5A AT-rich interaction domain 5A involved_in ISO (PMID:27671645) UniProt PMID:27671645 NCBI chr2A:102,762,076...102,778,072
Ensembl chr2A:97,459,690...97,475,651 		JBrowse link
G IL18 interleukin 18 involved_in IEA Ensembl GO_REF:0000107 NCBI chr11:107,024,376...107,045,194
Ensembl chr11:110,867,586...110,888,371 		JBrowse link
G IL18R1 interleukin 18 receptor 1 involved_in ISO (PMID:10653850) UniProt PMID:10653850 NCBI chr2A:99,419,686...99,462,650 JBrowse link
G IL1B interleukin 1 beta involved_in IEA Ensembl GO_REF:0000107 NCBI chr2A:89,216,313...89,223,358
Ensembl chr2A:113,846,306...113,853,424 		JBrowse link
G IL1R1 interleukin 1 receptor type 1 involved_in IEA Ensembl GO_REF:0000107 Ensembl chr2A:103,193,131...103,230,005 JBrowse link
G LOC100978961 lymphotactin involved_in ISO (PMID:9973465) BHF-UCL PMID:9973465 NCBI chr 1:143,837,578...144,068,261
Ensembl chr 1:147,785,654...147,790,587 		JBrowse link
G SLAMF1 signaling lymphocytic activation molecule family member 1 involved_in ISO (PMID:9126961) UniProt PMID:9126961 NCBI chr 1:135,963,748...136,002,982
Ensembl chr 1:139,888,772...139,925,461 		JBrowse link
G TBX21 T-box transcription factor 21 involved_in IEA Ensembl GO_REF:0000107 NCBI chr17:9,791,008...9,803,894
Ensembl chr17:9,973,920...9,985,660 		JBrowse link
positive regulation of T-helper 2 cell cytokine production term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G CD81 CD81 molecule involved_in IEA Ensembl GO_REF:0000107 NCBI chr11:2,400,503...2,421,132
Ensembl chr11:2,437,991...2,449,308 		JBrowse link
G DENND1B DENN domain containing 1B involved_in IEA Ensembl GO_REF:0000107 NCBI chr 1:173,102,371...173,365,024
Ensembl chr 1:177,420,565...177,676,293 		JBrowse link
G GATA3 GATA binding protein 3 acts_upstream_of_or_within ISO (PMID:15087456) MGI PMID:15087456 NCBI chr10:8,075,951...8,105,573
Ensembl chr10:8,064,207...8,086,272 		JBrowse link
G IL4 interleukin 4 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 5:128,091,342...128,099,886
Ensembl chr 5:134,253,039...134,261,581 		JBrowse link
G IL6 interleukin 6 involved_in ISO (PMID:11159963) BHF-UCL PMID:11159963 NCBI chr 7:23,415,922...23,420,767 JBrowse link
G LOC100978961 lymphotactin involved_in ISO (PMID:9973465) BHF-UCL PMID:9973465 NCBI chr 1:143,837,578...144,068,261
Ensembl chr 1:147,785,654...147,790,587 		JBrowse link
G NLRP3 NLR family pyrin domain containing 3 involved_in ISO (PMID:26098997) UniProt PMID:26098997 NCBI chr 1:223,052,307...223,084,736
Ensembl chr 1:228,505,147...228,537,216 		JBrowse link
G PRKCZ protein kinase C zeta involved_in IEA Ensembl GO_REF:0000107 NCBI chr 1:763,942...901,531
Ensembl chr 1:1,920,219...2,045,855 		JBrowse link
G RSAD2 radical S-adenosyl methionine domain containing 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chr2A:6,873,821...6,906,087
Ensembl chr2A:7,021,937...7,042,961 		JBrowse link
positive regulation of type IV hypersensitivity term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ZP3 zona pellucida glycoprotein 3 involved_in ISO (PMID:15579591) UniProt PMID:15579591 NCBI chr 7:67,574,932...67,592,757
Ensembl chr 7:82,844,162...82,891,655 		JBrowse link
regulation of T cell antigen processing and presentation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G WAS WASP actin nucleation promoting factor involved_in IEA Ensembl GO_REF:0000107 NCBI chr  X:40,982,132...40,989,767
Ensembl chr  X:48,842,765...48,850,380 		JBrowse link
regulation of T cell cytokine production term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G CCL20 C-C motif chemokine ligand 20 NOT|involved_in ISO (PMID:19050256) UniProt PMID:19050256 NCBI chr2B:115,052,768...115,056,479
Ensembl chr2B:233,862,505...233,866,225 		JBrowse link
G CCR2 C-C motif chemokine receptor 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 3:46,255,725...46,263,285
Ensembl chr 3:47,361,124...47,368,312 		JBrowse link
G CLC Charcot-Leyden crystal galectin involved_in ISO (PMID:17502455) UniProt PMID:17502455 NCBI chr13:95,374,662...95,375,973 JBrowse link
G TNFRSF1B TNF receptor superfamily member 1B involved_in IEA Ensembl
TreeGrafter		 GO_REF:0000107 GO_REF:0000118 NCBI chr 1:10,915,743...10,957,765
Ensembl chr 1:12,130,663...12,172,646 		JBrowse link
G TRPM4 transient receptor potential cation channel subfamily M member 4 involved_in IEA Ensembl GO_REF:0000107 NCBI chr19:46,168,301...46,224,726
Ensembl chr19:55,095,029...55,150,464 		JBrowse link
regulation of T cell mediated cytotoxicity term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G AGER advanced glycosylation end-product specific receptor involved_in IEA Ensembl GO_REF:0000107 NCBI chr 6:31,828,363...31,831,981
Ensembl chr 6:32,708,251...32,711,641 		JBrowse link
G RIPK3 receptor interacting serine/threonine kinase 3 involved_in IEA Ensembl GO_REF:0000107 NCBI chr14:5,112,512...5,116,486
Ensembl chr14:23,235,796...23,239,821 		JBrowse link
regulation of T cell mediated immune response to tumor cell term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G HMGB1 high mobility group box 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr13:11,737,942...11,894,923
Ensembl chr13:30,174,899...30,179,527 		JBrowse link
regulation of T cell mediated immunity term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G DPP4 dipeptidyl peptidase 4 ISO RGD PMID:15606609 RGD:1626458 NCBI chr2B:49,285,685...49,368,056
Ensembl chr2B:166,654,659...166,736,588 		JBrowse link
regulation of type IV hypersensitivity term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G FUT7 fucosyltransferase 7 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 9:108,090,793...108,093,513
Ensembl chr 9:137,058,831...137,061,607 		JBrowse link
susceptibility to T cell mediated cytotoxicity term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G NECTIN2 nectin cell adhesion molecule 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chr19:41,794,037...41,837,047
Ensembl chr19:50,399,668...50,443,024 		JBrowse link
G PVR PVR cell adhesion molecule involved_in ISO (PMID:15039383) BHF-UCL PMID:15039383 NCBI chr19:41,592,042...41,614,397
Ensembl chr19:50,196,980...50,217,006 		JBrowse link
T cell antigen processing and presentation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ICAM1 intercellular adhesion molecule 1 acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr19:9,821,402...9,837,021
Ensembl chr19:10,484,414...10,500,605 		JBrowse link
G KDM5D lysine demethylase 5D acts_upstream_of_or_within ISO (PMID:16301625) MGI PMID:16301625
G RFTN1 raftlin, lipid raft linker 1 involved_in ISO (PMID:19414744) UniProt PMID:19414744 NCBI chr 3:16,241,255...16,441,402
Ensembl chr 3:16,578,092...16,778,464 		JBrowse link
G TREX1 three prime repair exonuclease 1 acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr 3:48,387,762...48,389,693
Ensembl chr 3:49,470,222...49,471,331 		JBrowse link
G UNC93B1 unc-93 homolog B1, TLR signaling regulator acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr11:63,073,076...63,086,078
Ensembl chr11:66,382,059...66,394,541 		JBrowse link
T cell mediated cytotoxicity term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G B2M beta-2-microglobulin acts_upstream_of IEA Ensembl GO_REF:0000107 NCBI chr15:23,668,108...23,674,791
Ensembl chr15:41,836,345...41,842,991 		JBrowse link
G CADM1 cell adhesion molecule 1 NOT|involved_in ISO (PMID:15811952) UniProt PMID:15811952 NCBI chr11:110,008,314...110,347,876
Ensembl chr11:113,950,291...114,280,324 		JBrowse link
G CRTAM cytotoxic and regulatory T cell molecule NOT|involved_in ISO (PMID:15811952) HGNC-UCL PMID:15811952 NCBI chr11:117,671,581...117,705,818
Ensembl chr11:121,591,738...121,625,738 		JBrowse link
G CTSC cathepsin C involved_in IEA Ensembl GO_REF:0000107 NCBI chr11:83,299,827...83,345,383
Ensembl chr11:86,890,010...86,933,847 		JBrowse link
G CTSH cathepsin H involved_in IEA Ensembl GO_REF:0000107 NCBI chr15:57,893,379...57,917,194
Ensembl chr15:76,852,668...76,876,976 		JBrowse link
G EBAG9 estrogen receptor binding site associated antigen 9 acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr 8:106,190,208...106,216,402
Ensembl chr 8:108,335,590...108,361,475 		JBrowse link
G EMP2 epithelial membrane protein 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chr16:9,465,589...9,517,593
Ensembl chr16:10,694,425...10,744,744 		JBrowse link
G FCGR3A Fc gamma receptor IIIa acts_upstream_of_or_within ISO (PMID:21037563), (PMID:26306037) UniProt PMID:21037563 PMID:26306037 NCBI chr 1:137,027,943...137,036,738 JBrowse link
G GFUS GDP-L-fucose synthase acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr 8:140,366,003...140,371,018
Ensembl chr 8:143,381,054...143,386,008 		JBrowse link
G GZMB granzyme B acts_upstream_of_or_within ISO (PMID:16618603) MGI PMID:16618603 NCBI chr14:5,399,888...5,403,200
Ensembl chr14:23,523,619...23,526,931 		JBrowse link
G GZMM granzyme M acts_upstream_of_or_within ISO (PMID:15454490) MGI PMID:15454490 NCBI chr19:584,712...591,186 JBrowse link
G HPRT1 hypoxanthine phosphoribosyltransferase 1 acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr  X:123,609,248...123,650,102
Ensembl chr  X:133,916,681...133,948,197 		JBrowse link
G IL7R interleukin 7 receptor acts_upstream_of IEA Ensembl GO_REF:0000107 NCBI chr 5:74,489,188...74,516,330
Ensembl chr 5:79,769,859...79,792,612 		JBrowse link
G LOC100977055 patr class I histocompatibility antigen, alpha chain E acts_upstream_of ISO (PMID:1538753) MGI PMID:1538753 NCBI chr 6:30,233,293...30,238,056
Ensembl chr 6:31,101,251...31,107,262 		JBrowse link
G P2RX7 purinergic receptor P2X 7 acts_upstream_of ISO (PMID:14761980) MGI PMID:14761980 NCBI chr12:118,731,761...118,786,039
Ensembl chr12:122,102,888...122,154,068 		JBrowse link
G PPP3CB protein phosphatase 3 catalytic subunit beta acts_upstream_of IEA Ensembl GO_REF:0000107 NCBI chr10:69,984,241...70,043,352
Ensembl chr10:72,443,051...72,501,752 		JBrowse link
G PRF1 perforin 1 involved_in
acts_upstream_of_or_within 		IEA TreeGrafter
Ensembl		 GO_REF:0000107 GO_REF:0000118 NCBI chr10:67,071,141...67,078,057
Ensembl chr10:69,597,574...69,603,070 		JBrowse link
G RAET1E retinoic acid early transcript 1E acts_upstream_of_or_within ISO (PMID:11567106) MGI PMID:11567106 NCBI chr 6:147,695,601...147,703,327
Ensembl chr 6:152,400,887...152,408,583 		JBrowse link
G SERPINB9 serpin family B member 9 acts_upstream_of_or_within ISO (PMID:16618603) MGI PMID:16618603 NCBI chr 6:2,709,188...2,725,592
Ensembl chr 6:2,812,815...2,827,932 		JBrowse link
G STX11 syntaxin 11 acts_upstream_of_or_within ISO (PMID:23042080) MGI PMID:23042080 NCBI chr 6:141,924,656...141,974,579
Ensembl chr 6:146,688,670...146,689,533 		JBrowse link
G TAP2 transporter 2, ATP binding cassette subfamily B member acts_upstream_of IEA Ensembl GO_REF:0000107 NCBI chr 6:32,394,586...32,408,297
Ensembl chr 6:33,507,332...33,523,750 		JBrowse link
type IV hypersensitivity term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G EPHB6 EPH receptor B6 acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr 7:134,845,936...134,862,114
Ensembl chr 7:147,337,558...147,353,575 		JBrowse link
G GATA3 GATA binding protein 3 ISO RGD PMID:16336837 RGD:2314191 NCBI chr10:8,075,951...8,105,573
Ensembl chr10:8,064,207...8,086,272 		JBrowse link
Term paths to the root
Path 1
Term Annotations click to browse term
  biological_process 19315
    immune system process 2524
      immune effector process 671
        leukocyte mediated immunity 420
          lymphocyte mediated immunity 313
            T cell mediated immunity 140
              T cell antigen processing and presentation + 6
              T cell cytokine production + 41
              T cell mediated cytotoxicity + 61
              T cell mediated immune response to tumor cell + 16
              negative regulation of T cell mediated immunity + 35
              peripheral T cell tolerance induction + 2
              positive regulation of T cell mediated immunity + 70
              regulation of T cell mediated immunity + 109
              type IV hypersensitivity + 6
paths to the root