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ONTOLOGY REPORT - ANNOTATIONS

Term:T cell mediated immunity
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Accession:GO:0002456 term browser browse the term
Definition:Any process involved in the carrying out of an immune response by a T cell.
Synonyms:exact_synonym: T lymphocyte mediated immunity
 broad_synonym: cell-mediated immunity;   cellular immune response


show annotations for term's descendants           Sort by:
T cell mediated immunity term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G C4bpa complement component 4 binding protein, alpha involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr13:44,627,959...44,663,552
Ensembl chr13:42,075,717...42,111,205 		JBrowse link
G Cd46 CD46 molecule involved_in ISO
IBA		 (PMID:23086448)
GO_REF:0000033		 RGD
GO_Central		 PMID:23086448 GO_REF:0000033 NCBI chr13:109,104,122...109,134,903
Ensembl chr13:106,574,858...106,660,445 		JBrowse link
G Cd46l1 CD46 molecule like 1 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr20:34,538,996...34,539,997
Ensembl chr20:33,996,224...33,997,432 		JBrowse link
G Cd70 Cd70 molecule involved_in ISO
IEA		 (PMID:28011864)
GO_REF:0000107		 RGD
Ensembl		 PMID:28011864 GO_REF:0000107 NCBI chr 9:2,093,540...2,096,692
Ensembl chr 9:2,006,563...2,009,715 		JBrowse link
G Cd8a CD8 subunit alpha involved_in
acts_upstream_of_or_within		 IBA
ISO		 GO_REF:0000033
MGI:1857149 (PMID:1673361)		 GO_Central
RGD		 PMID:1673361 GO_REF:0000033 NCBI chr 4:104,924,116...104,928,353
Ensembl chr 4:103,365,804...103,370,040 		JBrowse link
G Cdh17 cadherin 17 NOT|involved_in ISO (PMID:15688343) RGD PMID:15688343 NCBI chr 5:30,024,544...30,112,226
Ensembl chr 5:25,262,758...25,314,884 		JBrowse link
G Clec4g C-type lectin domain family 4, member G acts_upstream_of ISO
IEA		 MGI:5510586 (PMID:19632227), (PMID:23487419)
GO_REF:0000107		 RGD
Ensembl		 PMID:19632227 PMID:23487419 GO_REF:0000107 NCBI chr12:6,578,266...6,582,913
Ensembl chr12:1,780,371...1,784,985 		JBrowse link
G Cr1l complement C3b/C4b receptor 1 like involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr13:109,138,132...109,189,068
Ensembl chr13:106,574,858...106,660,445 		JBrowse link
G Cr2 complement C3d receptor 2 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr13:109,207,034...109,244,980
Ensembl chr13:106,685,413...106,716,235 		JBrowse link
G Ephb6 Eph receptor B6 acts_upstream_of_or_within ISO
IEA		 MGI:3522020 (PMID:15599401)
GO_REF:0000107		 RGD
Ensembl		 PMID:15599401 GO_REF:0000107 NCBI chr 4:71,458,632...71,473,889
Ensembl chr 4:70,491,973...70,507,230 		JBrowse link
G Foxp3 forkhead box P3 acts_upstream_of_or_within ISO
IEA		 MGI:1857034 (PMID:11714795)
GO_REF:0000107		 RGD
Ensembl		 PMID:11714795 GO_REF:0000107 NCBI chr  X:17,580,380...17,601,181
Ensembl chr  X:14,908,494...14,923,838 		JBrowse link
G Jag1 jagged canonical Notch ligand 1 involved_in IEA
ISO		 GO_REF:0000107
(PMID:23086448)		 Ensembl
RGD		 PMID:23086448 GO_REF:0000107 NCBI chr 3:144,859,453...144,894,883
Ensembl chr 3:124,406,794...124,442,209 		JBrowse link
G Lyst lysosomal trafficking regulator acts_upstream_of_or_within ISO MGI:1855968 (PMID:6977094) RGD PMID:6977094 NCBI chr17:93,225,509...93,427,650
Ensembl chr17:86,241,384...86,443,480 		JBrowse link
G Myo1g myosin IG involved_in ISO
IEA		 (PMID:25083865)
GO_REF:0000107		 RGD
Ensembl		 PMID:25083865 GO_REF:0000107 NCBI chr14:85,600,619...85,615,760
Ensembl chr14:81,386,701...81,401,843 		JBrowse link
G Nfkbiz NFKB inhibitor zeta involved_in ISO MGI:3046930 (PMID:31182790) RGD PMID:31182790 NCBI chr11:58,251,720...58,279,767
Ensembl chr11:44,782,676...44,810,723 		JBrowse link
G Slfn2 schlafen family member 2 involved_in ISO (PMID:33986151) RGD PMID:33986151 NCBI chr10:68,450,861...68,457,198
Ensembl chr10:67,953,171...67,959,458 		JBrowse link
G Zp3r zona pellucida 3 receptor involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr13:44,572,283...44,617,101
Ensembl chr13:42,020,018...42,064,812 		JBrowse link
cytotoxic T cell degranulation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Rab27a RAB27A, member RAS oncogene family acts_upstream_of_or_within ISO
IEA		 MGI:1856656 (PMID:11266473)
GO_REF:0000107		 RGD
Ensembl		 PMID:11266473 GO_REF:0000107 NCBI chr 8:82,663,373...82,717,267
Ensembl chr 8:73,782,694...73,847,829 		JBrowse link
G Stx11 syntaxin 11 acts_upstream_of_or_within ISO MGI:5461477 (PMID:23042080), (PMID:23190531) RGD PMID:23042080 PMID:23190531 NCBI chr 1:9,111,216...9,140,227
Ensembl chr 1:7,289,976...7,320,164 		JBrowse link
negative regulation of cytotoxic T cell degranulation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ceacam1 CEA cell adhesion molecule 1 involved_in ISO
ISS		 (PMID:18424730)
GO_REF:0000024		 RGD
UniProt		 PMID:18424730 GO_REF:0000024 NCBI chr 1:90,171,401...90,187,810
Ensembl chr 1:81,043,595...81,059,992 		JBrowse link
G Nckap1l NCK associated protein 1 like involved_in ISO (PMID:32647003) RGD PMID:32647003 NCBI chr 7:136,455,900...136,501,384
Ensembl chr 7:134,577,482...134,622,934 		JBrowse link
negative regulation of T cell cytokine production term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Foxp3 forkhead box P3 involved_in ISO
IEA		 (PMID:15466453), (PMID:23169781)
GO_REF:0000107		 RGD
Ensembl		 PMID:15466453 PMID:23169781 GO_REF:0000107 NCBI chr  X:17,580,380...17,601,181
Ensembl chr  X:14,908,494...14,923,838 		JBrowse link
G Hfe homeostatic iron regulator involved_in ISO UniProtKB:P04439 (PMID:24643698) RGD PMID:24643698 NCBI chr17:41,841,302...41,849,359
Ensembl chr17:41,413,451...41,421,502 		JBrowse link
G Lilrb4 leukocyte immunoglobulin like receptor B4 involved_in ISO (PMID:18420485) RGD PMID:18420485 NCBI chr 1:78,847,685...78,853,294
Ensembl chr 1:69,805,250...69,810,660 		JBrowse link
G RT1-CE5 RT1 class I, locus CE5 involved_in ISO (PMID:24018270) RGD PMID:24018270 NCBI chr20:3,407,880...3,484,130 JBrowse link
G Slamf1 signaling lymphocytic activation molecule family member 1 involved_in ISO
IEA		 (PMID:11477403)
GO_REF:0000107		 RGD
Ensembl		 PMID:11477403 GO_REF:0000107 NCBI chr13:86,802,708...86,837,890
Ensembl chr13:84,270,316...84,305,497 		JBrowse link
G Smad7 SMAD family member 7 involved_in IEA
ISO		 GO_REF:0000107
(PMID:25642768)		 Ensembl
RGD		 PMID:25642768 GO_REF:0000107 NCBI chr18:71,263,508...71,291,849
Ensembl chr18:68,988,429...69,016,765 		JBrowse link
G Vsir V-set immunoregulatory receptor acts_upstream_of_or_within ISO (PMID:21383057) RGD PMID:21383057 NCBI chr20:28,824,493...28,850,175
Ensembl chr20:28,281,596...28,303,878 		JBrowse link
G Xcl1 X-C motif chemokine ligand 1 involved_in ISO (PMID:10887101) RGD PMID:10887101 NCBI chr13:79,781,784...79,785,440
Ensembl chr13:77,248,717...77,252,329 		JBrowse link
negative regulation of T cell mediated cytotoxicity term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ceacam1 CEA cell adhesion molecule 1 involved_in ISO
ISS		 (PMID:18424730)
GO_REF:0000024		 RGD
UniProt		 PMID:18424730 GO_REF:0000024 NCBI chr 1:90,171,401...90,187,810
Ensembl chr 1:81,043,595...81,059,992 		JBrowse link
G Il7r interleukin 7 receptor acts_upstream_of_or_within ISO MGI:1857198 (PMID:9215624) RGD PMID:9215624 NCBI chr 2:60,179,561...60,204,937
Ensembl chr 2:58,454,217...58,477,757 		JBrowse link
G Klrc1 killer cell lectin like receptor C1 involved_in ISO (PMID:9485206) RGD PMID:9485206 NCBI chr 4:164,828,163...164,838,446
Ensembl chr 4:163,147,189...163,152,425 		JBrowse link
G Klrd1 killer cell lectin like receptor D1 involved_in ISO
IEA
ISS		 (PMID:9485206)
GO_REF:0000107
GO_REF:0000024		 RGD
Ensembl
UniProt		 PMID:9485206 GO_REF:0000024 GO_REF:0000107 NCBI chr 4:164,730,833...164,742,539
Ensembl chr 4:163,045,067...163,056,518 		JBrowse link
G Ppp3cb protein phosphatase 3 catalytic subunit beta acts_upstream_of_or_within ISO
IEA		 MGI:2181294 (PMID:18097009)
GO_REF:0000107		 RGD
Ensembl		 PMID:18097009 GO_REF:0000107 NCBI chr15:3,809,182...3,854,204
Ensembl chr15:3,760,030...3,804,981 		JBrowse link
G Ptprc protein tyrosine phosphatase, receptor type, C involved_in ISS
ISO		 GO_REF:0000024
(PMID:9725213)		 UniProt
RGD		 PMID:9725213 GO_REF:0000024 NCBI chr13:52,147,717...52,259,810
Ensembl chr13:49,596,193...49,708,692 		JBrowse link
G RT1-M3-1 RT1 class Ib, locus M3, gene 1 involved_in ISO (PMID:11290782) RGD PMID:11290782 NCBI chr20:1,329,227...1,333,394
Ensembl chr20:1,287,521...1,328,117 		JBrowse link
negative regulation of T cell mediated cytotoxicity directed against tumor cell target term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Muc4 mucin 4, cell surface associated IDA RGD PMID:10232613 RGD:2303754 NCBI chr11:81,513,321...81,575,200 JBrowse link
negative regulation of T cell mediated immune response to tumor cell term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ahr aryl hydrocarbon receptor involved_in ISO
ISS		 (PMID:32818467)
GO_REF:0000024		 RGD
UniProt		 PMID:32818467 GO_REF:0000024 NCBI chr 6:57,961,423...57,998,901
Ensembl chr 6:52,234,089...52,271,568 		JBrowse link
G Cd274 CD274 molecule involved_in ISO (PMID:28813410), (PMID:28813417) RGD PMID:28813410 PMID:28813417 NCBI chr 1:236,526,215...236,549,956
Ensembl chr 1:227,116,649...227,134,450 		JBrowse link
G Il4i1 interleukin 4 induced 1 involved_in ISO (PMID:32818467)
(PMID:21469114), (PMID:28405502)		 RGD PMID:21469114 PMID:28405502 PMID:32818467 NCBI chr 1:104,435,540...104,461,049
Ensembl chr 1:95,295,601...95,324,562 		JBrowse link
G Mapk3 mitogen activated protein kinase 3 involved_in ISO (PMID:37208329) RGD PMID:37208329 NCBI chr 1:190,797,189...190,803,411
Ensembl chr 1:181,366,637...181,372,863 		JBrowse link
G Pdcd1 programmed cell death 1 involved_in ISO (PMID:38377992) RGD PMID:38377992 NCBI chr 9:101,866,124...101,879,278
Ensembl chr 9:94,418,791...94,431,937 		JBrowse link
G Ufl1 Ufm1-specific ligase 1 involved_in ISO
IEA
ISS		 (PMID:38377992)
GO_REF:0000107
GO_REF:0000024		 RGD
Ensembl
UniProt		 PMID:38377992 GO_REF:0000024 GO_REF:0000107 NCBI chr 5:43,759,271...43,791,682
Ensembl chr 5:38,962,171...38,995,199 		JBrowse link
G Usp5 ubiquitin specific peptidase 5 involved_in ISO (PMID:37208329) RGD PMID:37208329 NCBI chr 4:159,305,927...159,321,345
Ensembl chr 4:157,619,643...157,634,711 		JBrowse link
negative regulation of T cell mediated immunity term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Cd80 Cd80 molecule involved_in ISO (PMID:11015443) RGD PMID:11015443 NCBI chr11:75,760,073...75,798,978
Ensembl chr11:62,254,624...62,292,030 		JBrowse link
G Clec4g C-type lectin domain family 4, member G acts_upstream_of_or_within ISO
IEA		 MGI:5510586 (PMID:19632227), (PMID:23487419)
GO_REF:0000107		 RGD
Ensembl		 PMID:19632227 PMID:23487419 GO_REF:0000107 NCBI chr12:6,578,266...6,582,913
Ensembl chr12:1,780,371...1,784,985 		JBrowse link
G Dusp22 dual specificity phosphatase 22 acts_upstream_of_or_within ISO (PMID:24714587) RGD PMID:24714587 NCBI chr17:33,989,637...34,040,021
Ensembl chr17:33,780,981...33,831,321 		JBrowse link
G Nod2 nucleotide-binding oligomerization domain containing 2 acts_upstream_of_or_within ISO MGI:2680581 (PMID:16949315) RGD PMID:16949315 NCBI chr19:34,555,832...34,596,281
Ensembl chr19:18,382,439...18,417,177 		JBrowse link
negative regulation of T-helper 2 cell cytokine production term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Arg1 arginase 1 involved_in IEA
ISO		 GO_REF:0000107
(PMID:19360123)		 Ensembl
RGD		 PMID:19360123 GO_REF:0000107 NCBI chr 1:22,295,093...22,307,720
Ensembl chr 1:20,475,968...20,488,422 		JBrowse link
G Ifnb1 interferon beta 1 involved_in ISO (PMID:20554961) RGD PMID:20554961 NCBI chr 5:108,066,650...108,067,487
Ensembl chr 5:103,020,969...103,021,523 		JBrowse link
G Tbx21 T-box transcription factor 21 involved_in ISO
IEA		 (PMID:10761931), (PMID:23616576)
GO_REF:0000107		 RGD
Ensembl		 PMID:10761931 PMID:23616576 GO_REF:0000107 NCBI chr10:82,578,751...82,595,253
Ensembl chr10:82,082,322...82,098,831 		JBrowse link
negative regulation of type IV hypersensitivity term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Il20rb interleukin 20 receptor subunit beta acts_upstream_of_or_within ISO MGI:3830304 (PMID:19124723) RGD PMID:19124723 NCBI chr 8:109,858,108...109,896,066
Ensembl chr 8:100,980,383...101,009,942 		JBrowse link
G Spn sialophorin acts_upstream_of_or_within ISO MGI:1857246 (PMID:9645617) RGD PMID:9645617 NCBI chr 1:191,177,449...191,190,115
Ensembl chr 1:181,746,429...181,759,628 		JBrowse link
peripheral T cell tolerance induction term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Aire autoimmune regulator involved_in IBA
IEA
ISO		 GO_REF:0000033
GO_REF:0000107
(PMID:23993652)		 GO_Central
Ensembl
RGD		 PMID:23993652 GO_REF:0000033 GO_REF:0000107 NCBI chr20:10,635,775...10,650,709
Ensembl chr20:10,636,123...10,651,060 		JBrowse link
positive regulation of peripheral T cell tolerance induction term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Foxp3 forkhead box P3 acts_upstream_of_or_within ISO
IEA		 MGI:2654936 (PMID:16532000)
GO_REF:0000107		 RGD
Ensembl		 PMID:16532000 GO_REF:0000107 NCBI chr  X:17,580,380...17,601,181
Ensembl chr  X:14,908,494...14,923,838 		JBrowse link
positive regulation of T cell cytokine production term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G B2m beta-2 microglobulin involved_in ISO
IEA		 (PMID:24643698)
GO_REF:0000107		 RGD
Ensembl		 PMID:24643698 GO_REF:0000107 NCBI chr 3:129,549,236...129,555,354
Ensembl chr 3:109,095,729...109,101,766 		JBrowse link
G Cd55 CD55 molecule (Cromer blood group) involved_in ISO (PMID:16818763) RGD PMID:16818763 NCBI chr13:44,409,574...44,438,913
Ensembl chr13:41,857,395...41,885,831 		JBrowse link
G Cd7 Cd7 molecule involved_in ISO (PMID:10652336) RGD PMID:10652336 NCBI chr10:106,802,373...106,805,269
Ensembl chr10:106,304,056...106,306,967 		JBrowse link
G Fzd5 frizzled class receptor 5 involved_in ISO (PMID:16601243) RGD PMID:16601243 NCBI chr 9:73,606,860...73,614,039
Ensembl chr 9:66,113,112...66,121,457 		JBrowse link
G Malt1 MALT1 paracaspase involved_in ISO
IEA		 (PMID:15125833)
GO_REF:0000107		 RGD
Ensembl		 PMID:15125833 GO_REF:0000107 NCBI chr18:61,212,290...61,266,272
Ensembl chr18:58,942,299...58,994,260 		JBrowse link
G Map3k7 mitogen activated protein kinase kinase kinase 7 involved_in ISO
IEA		 (PMID:15125833)
GO_REF:0000107		 RGD
Ensembl		 PMID:15125833 GO_REF:0000107 NCBI chr 5:51,149,524...51,212,012
Ensembl chr 5:46,357,931...46,415,597 		JBrowse link
G RT1-CE16 RT1 class I, locus CE16 involved_in ISO (PMID:24643698) RGD PMID:24643698 NCBI chr20:3,261,656...3,265,548
Ensembl chr20:3,257,123...3,279,563 		JBrowse link
G Sash3 SAM and SH3 domain containing 3 acts_upstream_of_or_within ISO
IEA		 MGI:3716944 (PMID:16227612)
GO_REF:0000107		 RGD
Ensembl		 PMID:16227612 GO_REF:0000107 NCBI chr  X:132,204,717...132,219,421
Ensembl chr  X:127,326,859...127,341,519 		JBrowse link
G Sectm1b secreted and transmembrane 1B involved_in ISO (PMID:22184754) RGD PMID:22184754 NCBI chr10:106,822,397...106,832,105
Ensembl chr10:106,325,203...106,333,769 		JBrowse link
G Tnfsf4 TNF superfamily member 4 involved_in ISO
IEA		 (PMID:18354165), (PMID:9670042)
GO_REF:0000107		 RGD
Ensembl		 PMID:9670042 PMID:18354165 GO_REF:0000107 NCBI chr13:76,256,654...76,280,133
Ensembl chr13:73,723,329...73,746,788 		JBrowse link
G Traf2 Tnf receptor-associated factor 2 involved_in ISO
IEA		 (PMID:15125833)
GO_REF:0000107		 RGD
Ensembl		 PMID:15125833 GO_REF:0000107 NCBI chr 3:28,740,098...28,764,752
Ensembl chr 3:8,341,951...8,366,538 		JBrowse link
G Traf6 TNF receptor associated factor 6 involved_in ISO (PMID:15125833) RGD PMID:15125833 NCBI chr 3:108,418,537...108,443,330
Ensembl chr 3:87,963,514...87,983,507 		JBrowse link
G Xcl1 X-C motif chemokine ligand 1 involved_in ISO
IEA		 (PMID:9029087)
GO_REF:0000107		 RGD
Ensembl		 PMID:9029087 GO_REF:0000107 NCBI chr13:79,781,784...79,785,440
Ensembl chr13:77,248,717...77,252,329 		JBrowse link
positive regulation of T cell mediated cytotoxicity term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G AABR07000147.1 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033
G AABR07001348.1 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 Ensembl chr 1:39,668,472...39,670,153 JBrowse link
G AABR07044308.1 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 Ensembl chr20:1,789,779...1,793,115 JBrowse link
G AABR07044383.1 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 Ensembl chr20:3,403,777...3,436,874 JBrowse link
G Azgp1 alpha-2-glycoprotein 1, zinc-binding involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr12:22,044,685...22,051,248
Ensembl chr12:16,931,024...16,939,091 		JBrowse link
G B2m beta-2 microglobulin acts_upstream_of_or_within ISO (PMID:16299293) RGD PMID:16299293 NCBI chr 3:129,549,236...129,555,354
Ensembl chr 3:109,095,729...109,101,766 		JBrowse link
G Cd1d1 CD1d1 molecule involved_in
acts_upstream_of_or_within		 IBA
ISO		 GO_REF:0000033
(PMID:10201995)		 GO_Central
RGD		 PMID:10201995 GO_REF:0000033 NCBI chr 2:174,721,522...174,725,029
Ensembl chr 2:172,423,582...172,427,089 		JBrowse link
G Cyrib CYFIP related Rac1 interactor B involved_in ISO
IEA		 (PMID:22522492)
GO_REF:0000107		 RGD
Ensembl		 PMID:22522492 GO_REF:0000107 NCBI chr 7:97,524,941...97,649,846
Ensembl chr 7:95,633,876...95,697,686 		JBrowse link
G ENSRNOG00000064836 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 Ensembl chr20:2,606,621...2,618,153 JBrowse link
G ENSRNOG00000070971 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 Ensembl chr 1:1,841,026...1,859,446 JBrowse link
G Fadd Fas associated via death domain involved_in ISS
IEA
ISO		 GO_REF:0000024
GO_REF:0000107
(PMID:21876153)		 UniProt
Ensembl
RGD		 PMID:21876153 GO_REF:0000024 GO_REF:0000107 NCBI chr 1:209,169,245...209,175,423
Ensembl chr 1:199,739,994...199,745,653 		JBrowse link
G H2-m10.6l histocompatibility 2, M region locus 10.6 like involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr20:1,963,483...1,974,371
Ensembl chr20:1,925,049...1,966,105 		JBrowse link
G H60al histocompatibility 60a like involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr 1:3,195,927...3,198,679
Ensembl chr 1:1,588,152...1,590,424 		JBrowse link
G Hspa1b heat shock protein family A (Hsp70) member 1B IDA prevention of heat shock-induced resistance to CTL-mediated killing RGD PMID:10679071 RGD:1298959 NCBI chr20:3,859,756...3,863,800
Ensembl chr20:3,856,006...3,873,240
Ensembl chr20:3,856,006...3,873,240 		JBrowse link
G Hspa8 heat shock protein family A (Hsp70) member 8 IMP RGD PMID:8871636 RGD:10059395 NCBI chr 8:50,080,514...50,084,376
Ensembl chr 8:41,183,264...41,187,259 		JBrowse link
G Il12a interleukin 12A involved_in ISO
IEA		 (PMID:1674604), (PMID:2204066)
GO_REF:0000107		 RGD
Ensembl		 PMID:1674604 PMID:2204066 GO_REF:0000107 NCBI chr 2:155,275,734...155,282,997
Ensembl chr 2:152,965,769...152,972,734 		JBrowse link
G Il12b interleukin 12B involved_in ISO (PMID:14688363) RGD PMID:14688363 NCBI chr10:29,390,300...29,405,194
Ensembl chr10:28,893,008...28,902,903 		JBrowse link
G Il23a interleukin 23 subunit alpha involved_in ISO
IEA		 (PMID:14688363)
GO_REF:0000107		 RGD
Ensembl		 PMID:14688363 GO_REF:0000107 NCBI chr 7:1,306,320...1,308,434
Ensembl chr 7:721,809...723,923 		JBrowse link
G LOC120093164 retinoic acid early-inducible protein 1-gamma-like involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr 1:3,618,934...3,624,604
Ensembl chr 1:1,807,644...1,812,755 		JBrowse link
G P2rx7 purinergic receptor P2X 7 acts_upstream_of_or_within ISO MGI:3042190 (PMID:14761980) RGD PMID:14761980 NCBI chr12:39,550,531...39,594,984
Ensembl chr12:33,879,745...33,934,619 		JBrowse link
G Ptprc protein tyrosine phosphatase, receptor type, C acts_upstream_of_or_within ISO (PMID:6233370) RGD PMID:6233370 NCBI chr13:52,147,717...52,259,810
Ensembl chr13:49,596,193...49,708,692 		JBrowse link
G Raet1l retinoic acid early transcript 1L involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr 1:3,799,823...3,804,799
Ensembl chr 1:1,979,443...1,984,410 		JBrowse link
G Raet1ll1 retinoic acid early transcript 1L like 1 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr 1:3,206,980...3,249,638
Ensembl chr 1:1,397,230...1,402,656 		JBrowse link
G RT1-A RT1 class I, locus A involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033
G RT1-A-ps RT1 class I, A, pseudogene involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 Ensembl chr20:2,630,622...2,634,751 JBrowse link
G RT1-A1 RT1 class Ia, locus A1 IDA RGD PMID:11773898 RGD:2313503 NCBI chr20:4,907,139...4,910,798 JBrowse link
G RT1-A2 RT1 class Ia, locus A2 involved_in
acts_upstream_of_or_within		 ISO
IBA		 (PMID:20195504), (PMID:25631937)
GO_REF:0000033
(PMID:1538753)		 RGD
GO_Central		 PMID:1538753 PMID:20195504 PMID:25631937 GO_REF:0000033 NCBI chr20:4,872,720...4,876,425 JBrowse link
G RT1-CE1 RT1 class I, locus 1 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr20:3,560,455...3,564,428
Ensembl chr20:3,555,782...3,559,486 		JBrowse link
G RT1-CE10 RT1 class I, locus CE10 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr20:3,381,377...3,385,052 JBrowse link
G RT1-CE11 RT1 class I, locus CE11 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr20:3,355,422...3,385,063
Ensembl chr20:3,350,937...3,380,362 		JBrowse link
G RT1-CE12 RT1 class I, locus CE12 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr20:3,290,831...3,347,349 JBrowse link
G RT1-CE14 RT1 class I, locus CE14 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr20:3,301,813...3,305,472
Ensembl chr20:3,297,196...3,305,134 		JBrowse link
G RT1-CE16 RT1 class I, locus CE16 involved_in ISO
IBA		 (PMID:22031944), (PMID:2420472), (PMID:25631937), (PMID:8805302)
GO_REF:0000033		 RGD
GO_Central		 PMID:2420472 PMID:8805302 PMID:22031944 PMID:25631937 GO_REF:0000033 NCBI chr20:3,261,656...3,265,548
Ensembl chr20:3,257,123...3,279,563 		JBrowse link
G RT1-CE3 RT1 class I, locus CE3 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr20:3,521,323...3,525,218
Ensembl chr20:2,623,953...2,692,081 		JBrowse link
G RT1-CE5 RT1 class I, locus CE5 involved_in ISO (PMID:23851683) RGD PMID:23851683 NCBI chr20:3,407,880...3,484,130 JBrowse link
G RT1-Da RT1 class II, locus Da involved_in ISO
IEA		 (PMID:29884618)
GO_REF:0000107		 RGD
Ensembl		 PMID:29884618 GO_REF:0000107 NCBI chr20:4,515,393...4,520,387
Ensembl chr20:4,512,911...4,518,455 		JBrowse link
G RT1-Db1 RT1 class II, locus Db1 involved_in ISO (PMID:29884618) RGD PMID:29884618 NCBI chr20:4,550,594...4,560,182
Ensembl chr20:4,548,666...4,558,258 		JBrowse link
G Rt1-ec3 RT1 class I, locus EC3 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 Ensembl chr20:3,310,825...3,421,372 JBrowse link
G RT1-M1-2 RT1 class I, locus M1, gene 2 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr20:1,914,719...1,919,577
Ensembl chr20:1,910,656...1,917,936 		JBrowse link
G RT1-M1-4 RT1 class I, locus M1, gene 4 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr20:1,895,440...1,903,169
Ensembl chr20:1,889,164...1,893,815 		JBrowse link
G RT1-M1-5 RT1 class I, M1, gene 5 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr20:1,863,437...1,867,022
Ensembl chr20:1,811,604...1,860,708 		JBrowse link
G RT1-M10-ps1 RT1 class I, locus M10, pseudogene 1 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr20:1,992,028...1,994,119
Ensembl chr20:1,986,788...2,020,117 		JBrowse link
G RT1-M10-ps5 RT1 class I, locus M10, pseudogene 5 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 Ensembl chr20:1,768,641...1,772,357 JBrowse link
G RT1-M2 RT1 class Ib, locus M2 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr20:984,174...986,762
Ensembl chr20:978,935...981,723 		JBrowse link
G RT1-M3-1 RT1 class Ib, locus M3, gene 1 acts_upstream_of_or_within
involved_in		 ISO
IBA		 MGI:3701255 (PMID:16299293), (PMID:16461341), (PMID:16476767), (PMID:8464890)
GO_REF:0000033		 RGD
GO_Central		 PMID:8464890 PMID:16299293 PMID:16461341 PMID:16476767 GO_REF:0000033 NCBI chr20:1,329,227...1,333,394
Ensembl chr20:1,287,521...1,328,117 		JBrowse link
G RT1-M5 RT1 class Ib, locus M5 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr20:1,551,751...1,554,015
Ensembl chr20:1,546,511...1,548,775 		JBrowse link
G RT1-M6-2 RT1 class I, locus M6, gene 2 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr20:1,588,501...1,592,333
Ensembl chr20:1,583,299...1,586,215 		JBrowse link
G RT1-N1 RT1 class Ib, locus N1 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033
G RT1-N2 RT1 class Ib, locus N2 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr20:2,645,980...2,650,260
Ensembl chr20:2,641,202...2,644,900 		JBrowse link
G RT1-N3 RT1 class Ib, locus N3 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr20:2,666,469...2,670,355
Ensembl chr20:2,661,584...2,665,530 		JBrowse link
G RT1-O1l1 RT1 class Ib, locus O1 like 1 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr20:2,627,434...2,664,895
Ensembl chr20:2,623,953...2,692,081 		JBrowse link
G RT1-S3 RT1 class Ib, locus S3 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr20:2,675,463...2,680,229
Ensembl chr20:2,670,709...2,675,411 		JBrowse link
G RT1-T24-1 RT1 class I, locus T24, gene 1 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr20:2,766,304...2,779,680
Ensembl chr20:2,718,279...2,776,154 		JBrowse link
G RT1-T24-3 RT1 class I, locus T24, gene 3 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr20:2,723,043...2,752,691
Ensembl chr20:2,718,279...2,776,154 		JBrowse link
G RT1-T24-4 RT1 class I, locus T24, gene 4 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr20:2,689,329...2,749,848
Ensembl chr20:2,684,515...2,692,511
Ensembl chr20:2,684,515...2,692,511 		JBrowse link
G Stx7 syntaxin 7 involved_in ISO
IEA		 (PMID:21438968)
GO_REF:0000107		 RGD
Ensembl		 PMID:21438968 GO_REF:0000107 NCBI chr 1:23,016,330...23,056,579
Ensembl chr 1:21,197,075...21,237,279 		JBrowse link
G Tap2 transporter 2, ATP binding cassette subfamily B member acts_upstream_of_or_within IDA
IEA
ISO		 PMID:1758495
GO_REF:0000107
(PMID:1538753), (PMID:16299293)		 Ensembl
RGD		 PMID:1538753 PMID:16299293 PMID:1758495 GO_REF:0000107, RGD:1299069 NCBI chr20:4,638,257...4,652,296
Ensembl chr20:4,636,357...4,650,407 		JBrowse link
G Xcl1 X-C motif chemokine ligand 1 involved_in ISO (PMID:18832695) RGD PMID:18832695 NCBI chr13:79,781,784...79,785,440
Ensembl chr13:77,248,717...77,252,329 		JBrowse link
positive regulation of T cell mediated cytotoxicity directed against tumor cell target term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Mr1 major histocompatibility complex, class I-related involved_in ISO
IEA		 (PMID:31959982)
GO_REF:0000107		 RGD
Ensembl		 PMID:31959982 GO_REF:0000107 NCBI chr13:69,850,420...69,868,302
Ensembl chr13:67,299,585...67,317,970 		JBrowse link
G Slc22a13 solute carrier family 22 member 13 involved_in ISO (PMID:19282870) RGD PMID:19282870 NCBI chr 8:127,800,097...127,811,750
Ensembl chr 8:118,922,367...118,953,635 		JBrowse link
positive regulation of T cell mediated immune response to tumor cell term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Cd24 CD24 molecule acts_upstream_of_or_within ISO (PMID:7774619) RGD PMID:7774619 NCBI chr20:48,655,549...48,661,786
Ensembl chr20:47,073,512...47,079,662 		JBrowse link
G Fbxo38 F-box protein 38 involved_in ISO
IEA		 (PMID:30487606)
GO_REF:0000107		 RGD
Ensembl		 PMID:30487606 GO_REF:0000107 NCBI chr18:58,227,253...58,274,320
Ensembl chr18:55,956,959...56,003,961 		JBrowse link
G Hspd1 heat shock protein family D (Hsp60) member 1 involved_in ISO (PMID:10663613) RGD PMID:10663613 NCBI chr 9:64,073,610...64,084,332
Ensembl chr 9:56,579,201...56,589,662 		JBrowse link
G Klhl22 kelch-like family member 22 involved_in ISO (PMID:33109719) RGD PMID:33109719 NCBI chr11:96,695,168...96,736,079
Ensembl chr11:83,190,891...83,231,770 		JBrowse link
G Prkaa1 protein kinase AMP-activated catalytic subunit alpha 1 involved_in ISO
IEA		 (PMID:38377992)
GO_REF:0000107		 RGD
Ensembl		 PMID:38377992 GO_REF:0000107 NCBI chr 2:55,967,766...56,003,450
Ensembl chr 2:54,240,137...54,275,978 		JBrowse link
G RT1-Db1 RT1 class II, locus Db1 involved_in ISO (PMID:30282837) RGD PMID:30282837 NCBI chr20:4,550,594...4,560,182
Ensembl chr20:4,548,666...4,558,258 		JBrowse link
G Ywhag tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, gamma involved_in ISO
IEA		 (PMID:38377992)
GO_REF:0000107		 RGD
Ensembl		 PMID:38377992 GO_REF:0000107 NCBI chr12:26,381,106...26,409,466
Ensembl chr12:20,744,535...20,772,827 		JBrowse link
positive regulation of T cell mediated immunity term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ptprc protein tyrosine phosphatase, receptor type, C acts_upstream_of_or_within ISO MGI:2181288 (PMID:6233370), (PMID:8566034) RGD PMID:6233370 PMID:8566034 NCBI chr13:52,147,717...52,259,810
Ensembl chr13:49,596,193...49,708,692 		JBrowse link
G Zbtb1 zinc finger and BTB domain containing 1 involved_in ISO
IEA		 (PMID:22753936)
GO_REF:0000107		 RGD
Ensembl		 PMID:22753936 GO_REF:0000107 NCBI chr 6:100,832,506...100,864,019
Ensembl chr 6:95,096,387...95,118,996 		JBrowse link
positive regulation of T-helper 1 cell cytokine production term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Arid5a AT-rich interaction domain 5A involved_in ISO (PMID:27671645) RGD PMID:27671645 NCBI chr 9:46,030,513...46,058,729
Ensembl chr 9:38,534,590...38,547,597 		JBrowse link
G Il18 interleukin 18 involved_in IEA
ISO
ISS		 GO_REF:0000107
(PMID:10653850)
GO_REF:0000024		 Ensembl
RGD
UniProt		 PMID:10653850 GO_REF:0000024 GO_REF:0000107 NCBI chr 8:59,802,072...59,829,275
Ensembl chr 8:50,906,960...50,932,887 		JBrowse link
G Il18r1 interleukin 18 receptor 1 involved_in ISO
IEA		 (PMID:10653850)
GO_REF:0000107		 RGD
Ensembl		 PMID:10653850 GO_REF:0000107 NCBI chr 9:50,223,274...50,257,370
Ensembl chr 9:42,727,869...42,760,715 		JBrowse link
G Il1b interleukin 1 beta involved_in ISO
ISS		 (PMID:10653850)
GO_REF:0000024		 RGD
UniProt		 PMID:10653850 GO_REF:0000024 NCBI chr 3:137,030,200...137,036,581
Ensembl chr 3:116,577,010...116,583,415 		JBrowse link
G Il1r1 interleukin 1 receptor type 1 involved_in ISO
ISS
IEA		 (PMID:10653850)
GO_REF:0000024
GO_REF:0000107		 RGD
UniProt
Ensembl		 PMID:10653850 GO_REF:0000024 GO_REF:0000107 NCBI chr 9:50,000,558...50,076,579
Ensembl chr 9:42,504,735...42,579,937 		JBrowse link
G Slamf1 signaling lymphocytic activation molecule family member 1 involved_in ISO
IEA		 (PMID:9126961)
GO_REF:0000107		 RGD
Ensembl		 PMID:9126961 GO_REF:0000107 NCBI chr13:86,802,708...86,837,890
Ensembl chr13:84,270,316...84,305,497 		JBrowse link
G Tbx21 T-box transcription factor 21 involved_in ISO
IEA		 (PMID:10761931)
GO_REF:0000107		 RGD
Ensembl		 PMID:10761931 GO_REF:0000107 NCBI chr10:82,578,751...82,595,253
Ensembl chr10:82,082,322...82,098,831 		JBrowse link
G Xcl1 X-C motif chemokine ligand 1 involved_in IEA
ISO		 GO_REF:0000107
(PMID:9973465)		 Ensembl
RGD		 PMID:9973465 GO_REF:0000107 NCBI chr13:79,781,784...79,785,440
Ensembl chr13:77,248,717...77,252,329 		JBrowse link
positive regulation of T-helper 2 cell cytokine production term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Cd81 Cd81 molecule involved_in ISS
ISO		 GO_REF:0000024
(PMID:8766544)
(PMID:11046035)		 UniProt
RGD		 PMID:8766544 PMID:11046035 GO_REF:0000024 NCBI chr 1:207,665,274...207,681,094
Ensembl chr 1:198,241,484...198,251,660 		JBrowse link
G Dennd1b DENN domain containing 1B involved_in ISO
IEA		 (PMID:26774822)
GO_REF:0000107		 RGD
Ensembl		 PMID:26774822 GO_REF:0000107 NCBI chr13:53,096,717...53,324,372
Ensembl chr13:50,545,836...50,770,601 		JBrowse link
G Gata3 GATA binding protein 3 acts_upstream_of_or_within ISO
IEA		 (PMID:15087456)
GO_REF:0000107		 RGD
Ensembl		 PMID:15087456 GO_REF:0000107 NCBI chr17:73,544,234...73,575,670
Ensembl chr17:68,643,873...68,665,391 		JBrowse link
G Il4 interleukin 4 involved_in ISO (PMID:20554961) RGD PMID:20554961 NCBI chr10:38,272,003...38,277,549
Ensembl chr10:37,771,203...37,776,750 		JBrowse link
G Il6 interleukin 6 involved_in ISO (PMID:11159963) RGD PMID:11159963 NCBI chr 4:5,889,999...5,894,575
Ensembl chr 4:5,213,394...5,219,178 		JBrowse link
G Nlrp3 NLR family, pyrin domain containing 3 involved_in ISO
IEA		 (PMID:26098997)
GO_REF:0000107		 RGD
Ensembl		 PMID:26098997 GO_REF:0000107 NCBI chr10:44,826,299...44,853,373
Ensembl chr10:44,328,566...44,352,811 		JBrowse link
G Prkcz protein kinase C, zeta involved_in ISS
ISO		 GO_REF:0000024
(PMID:15987782)		 UniProt
RGD		 PMID:15987782 GO_REF:0000024 NCBI chr 5:171,101,774...171,212,694
Ensembl chr 5:165,819,466...165,930,367 		JBrowse link
G Rsad2 radical S-adenosyl methionine domain containing 2 involved_in ISS
ISO
IEA		 GO_REF:0000024
(PMID:19047684)
GO_REF:0000107		 UniProt
RGD
Ensembl		 PMID:19047684 GO_REF:0000024 GO_REF:0000107 NCBI chr 6:48,774,985...48,788,245
Ensembl chr 6:43,047,658...43,059,699 		JBrowse link
G Xcl1 X-C motif chemokine ligand 1 involved_in IEA
ISO		 GO_REF:0000107
(PMID:9973465)		 Ensembl
RGD		 PMID:9973465 GO_REF:0000107 NCBI chr13:79,781,784...79,785,440
Ensembl chr13:77,248,717...77,252,329 		JBrowse link
positive regulation of type IV hypersensitivity term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Zp3 zona pellucida glycoprotein 3 involved_in ISO
ISS
IEA		 (PMID:15579591)
GO_REF:0000024
GO_REF:0000107		 RGD
UniProt
Ensembl		 PMID:15579591 GO_REF:0000024 GO_REF:0000107 NCBI chr12:26,327,161...26,334,126
Ensembl chr12:20,690,547...20,697,513 		JBrowse link
regulation of T cell antigen processing and presentation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Was WASP actin nucleation promoting factor involved_in ISO
IEA		 (PMID:22804504)
GO_REF:0000107		 RGD
Ensembl		 PMID:22804504 GO_REF:0000107 NCBI chr  X:17,077,057...17,085,802
Ensembl chr  X:14,405,124...14,413,849 		JBrowse link
regulation of T cell cytokine production term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ccl20 C-C motif chemokine ligand 20 NOT|involved_in ISO (PMID:19050256) RGD PMID:19050256 NCBI chr 9:91,837,139...91,839,736
Ensembl chr 9:84,388,904...84,391,629 		JBrowse link
G Ccr2 C-C motif chemokine receptor 2 involved_in ISS
ISO		 GO_REF:0000024
(PMID:28507030)		 UniProt
RGD		 PMID:28507030 GO_REF:0000024 NCBI chr 8:132,611,883...132,619,106
Ensembl chr 8:123,734,430...123,742,100 		JBrowse link
G Tnfrsf1b TNF receptor superfamily member 1B involved_in IBA
ISO		 GO_REF:0000033
(PMID:28052249)		 GO_Central
RGD		 PMID:28052249 GO_REF:0000033 NCBI chr 5:162,356,250...162,387,411
Ensembl chr 5:157,070,642...157,104,206 		JBrowse link
G Trpm4 transient receptor potential cation channel, subfamily M, member 4 involved_in ISO
IEA
ISS		 (PMID:20656926)
GO_REF:0000107
GO_REF:0000024		 RGD
Ensembl
UniProt		 PMID:20656926 GO_REF:0000024 GO_REF:0000107 NCBI chr 1:104,918,462...104,949,453
Ensembl chr 1:95,782,000...95,812,532 		JBrowse link
regulation of T cell mediated cytotoxicity term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ager advanced glycosylation end product-specific receptor involved_in ISO
IEA		 (PMID:22473704)
GO_REF:0000107		 RGD
Ensembl		 PMID:22473704 GO_REF:0000107 NCBI chr20:4,152,758...4,155,956
Ensembl chr20:4,147,890...4,151,078 		JBrowse link
G Ripk3 receptor-interacting serine-threonine kinase 3 involved_in ISS
ISO		 GO_REF:0000024
UniProtKB:Q61160 (PMID:21876153)		 UniProt
RGD		 PMID:21876153 GO_REF:0000024 NCBI chr15:33,253,071...33,262,025
Ensembl chr15:29,283,145...29,292,121 		JBrowse link
regulation of T cell mediated immune response to tumor cell term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Hmgb1 high mobility group box 1 involved_in ISS
ISO		 GO_REF:0000024
(PMID:23108142)		 UniProt
RGD		 PMID:23108142 GO_REF:0000024 NCBI chr12:11,009,236...11,015,941
Ensembl chr12:5,901,586...5,978,565
Ensembl chr16:5,901,586...5,978,565 		JBrowse link
regulation of T cell mediated immunity term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Dpp4 dipeptidylpeptidase 4 IMP RGD PMID:15606609 RGD:1626458 NCBI chr 3:67,370,794...67,452,422
Ensembl chr 3:46,962,243...47,043,901 		JBrowse link
regulation of type IV hypersensitivity term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Fut7 fucosyltransferase 7 involved_in ISO (PMID:11535629) RGD PMID:11535629 NCBI chr 3:28,635,913...28,640,407
Ensembl chr 3:8,239,384...8,242,260 		JBrowse link
susceptibility to T cell mediated cytotoxicity term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Nectin2 nectin cell adhesion molecule 2 involved_in ISO
IEA		 (PMID:15039383)
GO_REF:0000107		 RGD
Ensembl		 PMID:15039383 GO_REF:0000107 NCBI chr 1:88,500,086...88,535,474
Ensembl chr 1:79,372,119...79,407,360 		JBrowse link
G Pvr PVR cell adhesion molecule involved_in ISO (PMID:15039383) RGD PMID:15039383 NCBI chr 1:88,689,235...88,704,641
Ensembl chr 1:79,546,879...79,576,715 		JBrowse link
T cell antigen processing and presentation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Icam1 intercellular adhesion molecule 1 acts_upstream_of_or_within ISO (PMID:2479693) RGD PMID:2479693 NCBI chr 8:27,829,688...27,841,618
Ensembl chr 8:19,553,645...19,565,438 		JBrowse link
G Kdm5d lysine demethylase 5D acts_upstream_of_or_within ISO
IEA		 (PMID:16301625)
GO_REF:0000107		 RGD
Ensembl		 PMID:16301625 GO_REF:0000107 NCBI chr  Y:551,621...647,742
Ensembl chr  Y:530,401...624,018 		JBrowse link
G Rftn1 raftlin lipid raft linker 1 involved_in ISO (PMID:19414744) RGD PMID:19414744 NCBI chr 9:18,302,143...18,499,819
Ensembl chr 9:10,804,611...11,002,084 		JBrowse link
G Treml4 triggering receptor expressed on myeloid cells-like 4 acts_upstream_of_or_within ISO (PMID:22210914) RGD PMID:22210914 NCBI chr 9:20,216,569...20,241,476
Ensembl chr 9:12,721,815...12,743,253 		JBrowse link
G Trex1 three prime repair exonuclease 1 acts_upstream_of_or_within ISO
IEA		 MGI:3052754 (PMID:24218451)
GO_REF:0000107		 RGD
Ensembl		 PMID:24218451 GO_REF:0000107 NCBI chr 8:118,585,082...118,586,382
Ensembl chr 8:109,706,613...109,708,796 		JBrowse link
G Unc93b1 unc-93 homolog B1, TLR signaling regulator acts_upstream_of_or_within ISO
IEA		 MGI:3619211 (PMID:16415873)
GO_REF:0000107		 RGD
Ensembl		 PMID:16415873 GO_REF:0000107 NCBI chr 1:210,596,639...210,607,579
Ensembl chr 1:201,152,693...201,178,338 		JBrowse link
T cell mediated cytotoxicity term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G B2m beta-2 microglobulin acts_upstream_of ISO (PMID:16299293) RGD PMID:16299293 NCBI chr 3:129,549,236...129,555,354
Ensembl chr 3:109,095,729...109,101,766 		JBrowse link
G Cadm1 cell adhesion molecule 1 NOT|involved_in ISO (PMID:15811952) RGD PMID:15811952 NCBI chr 8:56,744,374...57,075,264
Ensembl chr 8:47,847,325...48,182,833 		JBrowse link
G Crtam cytotoxic and regulatory T cell molecule NOT|involved_in ISO (PMID:15811952) RGD PMID:15811952 NCBI chr 8:50,237,210...50,274,472
Ensembl chr 8:41,340,837...41,377,343 		JBrowse link
G Ctsc cathepsin C involved_in ISO
IEA		 UniProtKB:P49935 (PMID:20435891)
GO_REF:0000107		 RGD
Ensembl		 PMID:20435891 GO_REF:0000107 NCBI chr 1:151,440,860...151,472,430
Ensembl chr 1:142,028,392...142,060,387 		JBrowse link
G Ctsh cathepsin H involved_in ISS
IEA
ISO		 GO_REF:0000024
GO_REF:0000107
UniProtKB:P97821 (PMID:20435891)		 UniProt
Ensembl
RGD		 PMID:20435891 GO_REF:0000024 GO_REF:0000107 NCBI chr 8:99,488,756...99,507,639
Ensembl chr 8:90,608,941...90,627,824 		JBrowse link
G Ebag9 estrogen receptor binding site associated antigen 9 acts_upstream_of_or_within ISO
IEA		 MGI:4359722 (PMID:35482418)
GO_REF:0000107		 RGD
Ensembl		 PMID:35482418 GO_REF:0000107 NCBI chr 7:77,695,213...77,713,565
Ensembl chr 7:75,810,594...75,861,248 		JBrowse link
G Emp2 epithelial membrane protein 2 involved_in ISS
ISO		 GO_REF:0000024
(PMID:12763482)		 UniProt
RGD		 PMID:12763482 GO_REF:0000024 NCBI chr10:5,866,869...5,901,533
Ensembl chr10:5,360,073...5,394,733 		JBrowse link
G Gfus GDP-L-fucose synthase acts_upstream_of_or_within ISO (PMID:2568889) RGD PMID:2568889 NCBI chr 7:109,492,808...109,497,719
Ensembl chr 7:107,612,094...107,616,948 		JBrowse link
G Gzmb granzyme B acts_upstream_of_or_within ISO MGI:1857156 (PMID:16618603) RGD PMID:16618603 NCBI chr15:34,459,007...34,462,469
Ensembl chr15:30,173,603...30,346,814 		JBrowse link
G Gzmm granzyme M acts_upstream_of_or_within ISO
IEA		 (PMID:15454490)
GO_REF:0000107		 RGD
Ensembl		 PMID:15454490 GO_REF:0000107 NCBI chr 7:10,661,683...10,667,448
Ensembl chr 7:10,011,066...10,016,665 		JBrowse link
G Hprt1 hypoxanthine phosphoribosyltransferase 1 acts_upstream_of_or_within ISO
IEA		 MGI:1857299 (PMID:12944494)
GO_REF:0000107		 RGD
Ensembl		 PMID:12944494 GO_REF:0000107 NCBI chr  X:137,655,744...137,687,718
Ensembl chr  X:132,736,096...132,768,154 		JBrowse link
G Il7r interleukin 7 receptor acts_upstream_of ISO MGI:1857198 (PMID:9215624) RGD PMID:9215624 NCBI chr 2:60,179,561...60,204,937
Ensembl chr 2:58,454,217...58,477,757 		JBrowse link
G Mill1 MHC I like leukocyte 1 involved_in ISO (PMID:10426993) RGD PMID:10426993 NCBI chr 1:87,500,591...87,526,983
Ensembl chr 1:78,372,802...78,398,930 		JBrowse link
G P2rx7 purinergic receptor P2X 7 acts_upstream_of ISO MGI:3042190 (PMID:14761980) RGD PMID:14761980 NCBI chr12:39,550,531...39,594,984
Ensembl chr12:33,879,745...33,934,619 		JBrowse link
G Ppp3cb protein phosphatase 3 catalytic subunit beta acts_upstream_of ISO
IEA		 MGI:2181294 (PMID:18097009)
GO_REF:0000107		 RGD
Ensembl		 PMID:18097009 GO_REF:0000107 NCBI chr15:3,809,182...3,854,204
Ensembl chr15:3,760,030...3,804,981 		JBrowse link
G Prf1 perforin 1 involved_in
acts_upstream_of_or_within		 IBA
IEA
ISO		 GO_REF:0000033
GO_REF:0000107
(PMID:21037563), (PMID:26306037), (PMID:7972104)
(PMID:15454490)		 GO_Central
Ensembl
RGD		 PMID:7972104 PMID:15454490 PMID:21037563 PMID:26306037 GO_REF:0000033 GO_REF:0000107 NCBI chr20:29,789,040...29,794,550
Ensembl chr20:29,246,202...29,251,701 		JBrowse link
G Raet1e retinoic acid early transcript 1E acts_upstream_of_or_within ISO (PMID:11567106) RGD PMID:11567106 NCBI chr 1:3,474,487...3,476,431
Ensembl chr 1:1,807,644...1,812,755 		JBrowse link
G RT1-A2 RT1 class Ia, locus A2 acts_upstream_of ISO (PMID:1538753) RGD PMID:1538753 NCBI chr20:4,872,720...4,876,425 JBrowse link
G RT1-CE16 RT1 class I, locus CE16 involved_in ISO (PMID:7504010) RGD PMID:7504010 NCBI chr20:3,261,656...3,265,548
Ensembl chr20:3,257,123...3,279,563 		JBrowse link
G Serpinb9 serpin family B member 9 acts_upstream_of_or_within ISO
IEA		 MGI:3687210 (PMID:16618603)
GO_REF:0000107		 RGD
Ensembl		 PMID:16618603 GO_REF:0000107 NCBI chr17:31,628,887...31,652,003
Ensembl chr17:31,420,125...31,443,230 		JBrowse link
G Stx11 syntaxin 11 acts_upstream_of_or_within ISO MGI:5461477 (PMID:23042080) RGD PMID:23042080 NCBI chr 1:9,111,216...9,140,227
Ensembl chr 1:7,289,976...7,320,164 		JBrowse link
G Tap2 transporter 2, ATP binding cassette subfamily B member acts_upstream_of ISO
IEA		 (PMID:1538753), (PMID:16299293)
GO_REF:0000107		 RGD
Ensembl		 PMID:1538753 PMID:16299293 GO_REF:0000107 NCBI chr20:4,638,257...4,652,296
Ensembl chr20:4,636,357...4,650,407 		JBrowse link
T cell mediated cytotoxicity directed against tumor cell target term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G RT1-CE16 RT1 class I, locus CE16 involved_in ISO (PMID:1402688), (PMID:17189421), (PMID:20364150) RGD PMID:1402688 PMID:17189421 PMID:20364150 NCBI chr20:3,261,656...3,265,548
Ensembl chr20:3,257,123...3,279,563 		JBrowse link
type IV hypersensitivity term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ephb6 Eph receptor B6 acts_upstream_of_or_within ISO
IEA		 MGI:3522020 (PMID:15599401)
GO_REF:0000107		 RGD
Ensembl		 PMID:15599401 GO_REF:0000107 NCBI chr 4:71,458,632...71,473,889
Ensembl chr 4:70,491,973...70,507,230 		JBrowse link
G Gata3 GATA binding protein 3 IEP RGD PMID:16336837 RGD:2314191 NCBI chr17:73,544,234...73,575,670
Ensembl chr17:68,643,873...68,665,391 		JBrowse link
Term paths to the root
Path 1
Term Annotations click to browse term
  biological_process 20558
    immune system process 3130
      immune effector process 844
        leukocyte mediated immunity 580
          lymphocyte mediated immunity 465
            T cell mediated immunity 170
              T cell antigen processing and presentation + 7
              T cell cytokine production + 40
              T cell mediated cytotoxicity + 87
              T cell mediated immune response to tumor cell + 19
              negative regulation of T cell mediated immunity + 33
              peripheral T cell tolerance induction + 2
              positive regulation of T cell mediated immunity + 96
              regulation of T cell mediated immunity + 132
              type IV hypersensitivity + 6
paths to the root