Send us a Message



Submit Data |  Help |  Video Tutorials |  News |  Publications |  Download |  REST API |  Citing RGD |  Contact   

ONTOLOGY REPORT - ANNOTATIONS


Term:production of molecular mediator of immune response
go back to main search page
Accession:GO:0002440 term browser browse the term
Definition:The synthesis or release of any molecular mediator of the immune response, resulting in an increase in its intracellular or extracellular levels.
Comment:Note that this term is in the subset of terms that should not be used for direct gene product annotation. Instead, select one of the 'regulation' children terms.
Synonyms:related_synonym: production of cellular mediator of immune response


GViewer not supported for the selected species.

show annotations for term's descendants           Sort by:
antibacterial peptide biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Lgals4 galectin 4 involved_in
acts_upstream_of_or_within
IEA
ISO
(PMID:27427436) Ensembl
MGI
PMID:27427436 GO_REF:0000107 NCBI chrNW_004936661:1,772,394...1,780,590
Ensembl chrNW_004936661:1,772,075...1,779,626
JBrowse link
G Mmp7 matrix metallopeptidase 7 involved_in
acts_upstream_of_or_within
IEA
ISO
(PMID:20056603) Ensembl
MGI
PMID:20056603 GO_REF:0000107 NCBI chrNW_004936551:5,388,456...5,395,071
Ensembl chrNW_004936551:5,388,459...5,395,071
JBrowse link
antibacterial peptide secretion term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Mmp7 matrix metallopeptidase 7 involved_in
acts_upstream_of_or_within
IEA
ISO
(PMID:11248802) Ensembl
MGI
PMID:11248802 GO_REF:0000107 NCBI chrNW_004936551:5,388,456...5,395,071
Ensembl chrNW_004936551:5,388,459...5,395,071
JBrowse link
B cell affinity maturation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Btk Bruton tyrosine kinase involved_in
acts_upstream_of_or_within
IEA
ISO
(PMID:7680896) Ensembl
MGI
PMID:7680896 GO_REF:0000107 NCBI chrNW_004936813:429,400...467,481
Ensembl chrNW_004936813:429,224...463,441
JBrowse link
G LOC101968779 HLA class II histocompatibility antigen, DQ beta 1 chain-like involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936727:361,446...368,507
Ensembl chrNW_004936727:361,398...368,532
JBrowse link
G Traf3ip2 TRAF3 interacting protein 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936679:308,508...348,561
Ensembl chrNW_004936679:316,277...336,557
JBrowse link
biosynthetic process of antibacterial peptides active against Gram-negative bacteria term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G LOC101961846 neutrophil elastase involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936588:345,678...347,420
Ensembl chrNW_004936588:345,678...347,413
JBrowse link
biosynthetic process of antibacterial peptides active against Gram-positive bacteria term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Nod2 nucleotide binding oligomerization domain containing 2 involved_in
acts_upstream_of
IEA
ISO
(PMID:15692051) Ensembl
MGI
PMID:15692051 GO_REF:0000107 NCBI chrNW_004936475:3,708,069...3,742,845
Ensembl chrNW_004936475:3,713,362...3,745,982
JBrowse link
immunoglobulin heavy chain V-D-J recombination term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Polb DNA polymerase beta involved_in
acts_upstream_of_or_within
IEA
ISO
(PMID:24388753) Ensembl
MGI
PMID:24388753 GO_REF:0000107 NCBI chrNW_004936785:324,655...350,496
Ensembl chrNW_004936785:323,941...350,539
JBrowse link
G Yy1 YY1 transcription factor involved_in ISO (PMID:23531880) MGI PMID:23531880 NCBI chrNW_004936604:3,911,407...3,945,405 JBrowse link
immunoglobulin production term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Prkdc protein kinase, DNA-activated, catalytic subunit ISO RGD PMID:22981234 RGD:8696027 NCBI chrNW_004936590:4,722,914...4,887,615
Ensembl chrNW_004936590:4,722,873...4,890,156
JBrowse link
immunoglobulin V(D)J recombination term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Cyren cell cycle regulator of NHEJ involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936579:768,153...776,053
Ensembl chrNW_004936579:768,252...770,440
JBrowse link
G Foxp1 forkhead box P1 acts_upstream_of_or_within ISO (PMID:16819554) MGI PMID:16819554 NCBI chrNW_004936603:2,631,781...3,146,104
Ensembl chrNW_004936603:2,632,274...2,830,324
JBrowse link
G Lig4 DNA ligase 4 involved_in
acts_upstream_of_or_within
IEA
ISO
(PMID:9823897) Ensembl
TreeGrafter
MGI
PMID:9823897 GO_REF:0000107 GO_REF:0000118 NCBI chrNW_004936472:3,861,833...3,867,943
Ensembl chrNW_004936472:3,861,866...3,867,933
JBrowse link
G Nhej1 non-homologous end joining factor 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936569:1,494,783...1,578,587
Ensembl chrNW_004936569:1,495,446...1,578,590
JBrowse link
G Prkdc protein kinase, DNA-activated, catalytic subunit involved_in
acts_upstream_of_or_within
IEA
ISO
(PMID:9768755) Ensembl
TreeGrafter
MGI
PMID:9768755 GO_REF:0000107 GO_REF:0000118 NCBI chrNW_004936590:4,722,914...4,887,615
Ensembl chrNW_004936590:4,722,873...4,890,156
JBrowse link
G Tcf3 transcription factor 3 acts_upstream_of_or_within
involved_in
ISO
IEA
(PMID:16428437) MGI
TreeGrafter
Ensembl
PMID:16428437 GO_REF:0000107 GO_REF:0000118 NCBI chrNW_004936588:884,817...913,052
Ensembl chrNW_004936588:884,789...912,753
JBrowse link
G Xrcc4 X-ray repair cross complementing 4 acts_upstream_of_or_within
involved_in
ISO
IEA
(PMID:9875844) MGI
TreeGrafter
PMID:9875844 GO_REF:0000118 NCBI chrNW_004936469:2,248,367...2,495,215
Ensembl chrNW_004936469:2,248,039...2,495,226
JBrowse link
isotype switching term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Aicda activation induced cytidine deaminase involved_in
acts_upstream_of_or_within
IEA
ISO
(PMID:17713479) Ensembl
MGI
PMID:17713479 GO_REF:0000107 NCBI chrNW_004936870:25,039...34,601
Ensembl chrNW_004936870:25,039...34,601
JBrowse link
G Atad5 ATPase family AAA domain containing 5 involved_in
acts_upstream_of
IEA
ISO
(PMID:25404367) Ensembl
MGI
PMID:25404367 GO_REF:0000107 NCBI chrNW_004936538:2,815,370...2,877,084
Ensembl chrNW_004936538:2,811,174...2,874,113
JBrowse link
G Batf basic leucine zipper ATF-like transcription factor involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936488:4,607,716...4,631,237
Ensembl chrNW_004936488:4,607,716...4,631,283
JBrowse link
G Cd40lg CD40 ligand involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936513:10,607,617...10,620,403
Ensembl chrNW_004936513:10,607,617...10,620,403
JBrowse link
G Ercc1 ERCC excision repair 1, endonuclease non-catalytic subunit involved_in
acts_upstream_of_or_within
IEA
ISO
(PMID:15280420) Ensembl
MGI
PMID:15280420 GO_REF:0000107 NCBI chrNW_004936706:1,854,938...1,867,521
Ensembl chrNW_004936706:1,852,359...1,867,745
JBrowse link
G Exo1 exonuclease 1 acts_upstream_of_or_within ISO (PMID:14716311) MGI PMID:14716311 NCBI chrNW_004936526:8,570,488...8,627,004 JBrowse link
G Exosc3 exosome component 3 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936524:5,580,855...5,586,170
Ensembl chrNW_004936524:5,581,090...5,586,128
JBrowse link
G Exosc6 exosome component 6 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936475:23,295,441...23,297,321
Ensembl chrNW_004936475:23,295,500...23,296,318
JBrowse link
G Lig4 DNA ligase 4 involved_in
acts_upstream_of_or_within
IEA
ISO
(PMID:17713479) Ensembl
MGI
PMID:17713479 GO_REF:0000107 NCBI chrNW_004936472:3,861,833...3,867,943
Ensembl chrNW_004936472:3,861,866...3,867,933
JBrowse link
G Mlh1 mutL homolog 1 involved_in
acts_upstream_of_or_within
IEA
ISO
(PMID:12743174) Ensembl
MGI
PMID:12743174 GO_REF:0000107 NCBI chrNW_004936473:26,556,636...26,600,830
Ensembl chrNW_004936473:26,556,611...26,603,736
JBrowse link
G Msh2 mutS homolog 2 involved_in
acts_upstream_of_or_within
IEA
ISO
(PMID:12743174)
(PMID:10430621)
Ensembl
MGI
PMID:10430621 PMID:12743174 GO_REF:0000107 NCBI chrNW_004936508:4,943,987...5,013,356
Ensembl chrNW_004936508:4,944,007...5,013,356
JBrowse link
G Msh6 mutS homolog 6 involved_in
acts_upstream_of_or_within
IEA
ISO
(PMID:16618598)
(PMID:17015724)
Ensembl
MGI
PMID:16618598 PMID:17015724 GO_REF:0000107 NCBI chrNW_004936508:4,708,661...4,728,671
Ensembl chrNW_004936508:4,708,661...4,728,787
JBrowse link
G Nbn nibrin involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936544:3,773,828...3,812,673
Ensembl chrNW_004936544:3,775,220...3,808,837
JBrowse link
G Nfkbiz NFKB inhibitor zeta involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936630:1,601,006...1,633,844
Ensembl chrNW_004936630:1,601,010...1,632,745
JBrowse link
G Pcyt1a phosphate cytidylyltransferase 1A, choline involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936784:884,751...938,901
Ensembl chrNW_004936784:884,751...938,282
JBrowse link
G Rnf168 ring finger protein 168 involved_in ISO (PMID:20080757) UniProt PMID:20080757 NCBI chrNW_004936784:1,073,236...1,094,575 JBrowse link
G Rnf8 ring finger protein 8 involved_in ISO (PMID:20080757) UniProt PMID:20080757 NCBI chrNW_004936476:22,074,146...22,121,286 JBrowse link
G Sanbr SANT and BTB domain regulator of CSR involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936491:6,578,538...6,629,610
Ensembl chrNW_004936491:6,578,484...6,630,513
JBrowse link
G Swap70 switching B cell complex subunit SWAP70 involved_in
acts_upstream_of_or_within
IEA
ISO
(PMID:9642267) Ensembl
MGI
PMID:9642267 GO_REF:0000107 NCBI chrNW_004936528:8,441,839...8,511,374
Ensembl chrNW_004936528:8,441,527...8,511,376
JBrowse link
G Ung uracil DNA glycosylase involved_in
acts_upstream_of_or_within
IEA
ISO
(PMID:17015724) Ensembl
MGI
PMID:17015724 GO_REF:0000107 NCBI chrNW_004936769:911,296...922,770
Ensembl chrNW_004936769:910,838...922,726
JBrowse link
G Xrcc4 X-ray repair cross complementing 4 acts_upstream_of_or_within ISO (PMID:17713479) MGI PMID:17713479 NCBI chrNW_004936469:2,248,367...2,495,215
Ensembl chrNW_004936469:2,248,039...2,495,226
JBrowse link
isotype switching to IgA isotypes term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ccr6 C-C motif chemokine receptor 6 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936489:16,669,297...16,689,451
Ensembl chrNW_004936489:16,669,297...16,689,451
JBrowse link
isotype switching to IgE isotypes term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Bcl6 BCL6 transcription repressor involved_in
acts_upstream_of
IEA
ISO
(PMID:10490661) Ensembl
MGI
PMID:10490661 GO_REF:0000107 NCBI chrNW_004936578:2,371,976...2,395,034
Ensembl chrNW_004936578:2,371,945...2,395,071
JBrowse link
G Foxp3 forkhead box P3 involved_in
acts_upstream_of
IEA
ISO
(PMID:16275384) Ensembl
MGI
PMID:16275384 GO_REF:0000107 NCBI chrNW_004936721:1,118,376...1,125,282
Ensembl chrNW_004936721:1,118,782...1,132,308
JBrowse link
G Stat6 signal transducer and activator of transcription 6 involved_in
acts_upstream_of
IEA
ISO
(PMID:10490661) Ensembl
MGI
PMID:10490661 GO_REF:0000107 NCBI chrNW_004936646:1,297,530...1,312,508
Ensembl chrNW_004936646:1,296,290...1,312,157
JBrowse link
isotype switching to IgG isotypes term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Hspd1 heat shock protein family D (Hsp60) member 1 involved_in ISO (PMID:16148103) BHF-UCL PMID:16148103 NCBI chrNW_004936506:1,678,069...1,687,632 JBrowse link
negative regulation of cytokine production involved in immune response term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Angpt1 angiopoietin 1 involved_in
acts_upstream_of_or_within
IEA
ISO
(PMID:20060382) Ensembl
MGI
PMID:20060382 GO_REF:0000107 NCBI chrNW_004936470:37,105,469...37,328,183
Ensembl chrNW_004936470:37,105,466...37,328,190
JBrowse link
G Apoa1 apolipoprotein A1 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936542:2,111,055...2,112,626
Ensembl chrNW_004936542:2,111,052...2,112,854
JBrowse link
G Apoa2 apolipoprotein A2 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936903:520,420...521,726
Ensembl chrNW_004936903:520,650...521,910
JBrowse link
G Il10 interleukin 10 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936557:5,834,874...5,838,502
Ensembl chrNW_004936557:5,834,874...5,838,502
JBrowse link
G Tnf tumor necrosis factor involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936727:1,936,066...1,937,766
Ensembl chrNW_004936727:1,936,066...1,937,766
JBrowse link
negative regulation of dendritic cell cytokine production term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Jak3 Janus kinase 3 involved_in ISO (PMID:16020505) BHF-UCL PMID:16020505 NCBI chrNW_004936596:3,212,593...3,224,426
Ensembl chrNW_004936596:3,212,593...3,224,048
JBrowse link
negative regulation of immunoglobulin production term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Cd22 CD22 molecule involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936570:960,592...971,688
Ensembl chrNW_004936570:960,746...969,049
JBrowse link
G Fcgr2b Fc fragment of IgG receptor IIb acts_upstream_of_or_within ISO (PMID:12385742) MGI PMID:12385742 NCBI chrNW_004937131:80,014...96,114 JBrowse link
G Ifnb1 interferon beta 1 ISO RGD PMID:10494101 RGD:401854240 NCBI chrNW_004936652:2,736,270...2,736,833 JBrowse link
G Il13ra2 interleukin 13 receptor subunit alpha 2 involved_in
acts_upstream_of_or_within
IEA
ISO
(PMID:15944273) Ensembl
MGI
PMID:15944273 GO_REF:0000107 NCBI chrNW_004936499:860,179...883,884
Ensembl chrNW_004936499:863,599...883,855
JBrowse link
G Il33 interleukin 33 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936539:763,755...791,461
Ensembl chrNW_004936539:623,248...791,470
JBrowse link
G LOC101964865 complement receptor type 1 acts_upstream_of ISO (PMID:22962438) ARUK-UCL PMID:22962438 NCBI chrNW_004936557:5,185,831...5,284,999 JBrowse link
G Prkdc protein kinase, DNA-activated, catalytic subunit ISO RGD PMID:22981234 RGD:8696027 NCBI chrNW_004936590:4,722,914...4,887,615
Ensembl chrNW_004936590:4,722,873...4,890,156
JBrowse link
G Tmbim6 transmembrane BAX inhibitor motif containing 6 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936512:7,427,926...7,448,700
Ensembl chrNW_004936512:7,427,729...7,449,078
JBrowse link
G Zpbp2 zona pellucida binding protein 2 involved_in
acts_upstream_of_or_within
IEA
ISO
(PMID:29536159) Ensembl
MGI
PMID:29536159 GO_REF:0000107 NCBI chrNW_004936490:15,029,447...15,038,046
Ensembl chrNW_004936490:15,029,562...15,037,756
JBrowse link
negative regulation of isotype switching term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Parp3 poly(ADP-ribose) polymerase family member 3 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936529:3,291,282...3,297,581
Ensembl chrNW_004936529:3,291,269...3,299,992
JBrowse link
negative regulation of isotype switching to IgE isotypes term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Bcl6 BCL6 transcription repressor involved_in
acts_upstream_of_or_within
IEA
ISO
(PMID:10490661) Ensembl
MGI
PMID:10490661 GO_REF:0000107 NCBI chrNW_004936578:2,371,976...2,395,034
Ensembl chrNW_004936578:2,371,945...2,395,071
JBrowse link
G Foxp3 forkhead box P3 involved_in
acts_upstream_of_or_within
IEA
ISO
(PMID:16275384) Ensembl
MGI
PMID:16275384 GO_REF:0000107 NCBI chrNW_004936721:1,118,376...1,125,282
Ensembl chrNW_004936721:1,118,782...1,132,308
JBrowse link
G Ndfip1 Nedd4 family interacting protein 1 acts_upstream_of_or_within ISO (PMID:17137798) MGI PMID:17137798 NCBI chrNW_004936504:12,053,470...12,103,346 JBrowse link
negative regulation of macrophage cytokine production term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Acp5 acid phosphatase 5, tartrate resistant involved_in
acts_upstream_of_or_within
IEA
ISO
(PMID:11168643) Ensembl
MGI
PMID:11168643 GO_REF:0000107 NCBI chrNW_004936659:1,598,252...1,642,615
Ensembl chrNW_004936659:1,598,177...1,600,262
JBrowse link
G Atg9a autophagy related 9A acts_upstream_of_or_within ISO (PMID:24670807) MGI PMID:24670807 NCBI chrNW_004936569:1,635,958...1,645,600
Ensembl chrNW_004936569:1,635,836...1,645,815
JBrowse link
G Axl AXL receptor tyrosine kinase involved_in
acts_upstream_of_or_within
IEA
ISO
(PMID:16831897) Ensembl
MGI
PMID:16831897 GO_REF:0000107 NCBI chrNW_004936661:3,658,140...3,687,290
Ensembl chrNW_004936661:3,657,831...3,687,816
JBrowse link
G Cuedc2 CUE domain containing 2 acts_upstream_of_or_within
involved_in
ISO
IEA
(PMID:24882011) MGI
Ensembl
PMID:24882011 GO_REF:0000107 NCBI chrNW_004936600:3,439,385...3,445,731
Ensembl chrNW_004936600:3,439,289...3,449,293
JBrowse link
G Epx eosinophil peroxidase involved_in
acts_upstream_of_or_within
IEA
ISO
(PMID:16926417) Ensembl
MGI
PMID:16926417 GO_REF:0000107 NCBI chrNW_004936490:4,876,857...4,887,275
Ensembl chrNW_004936490:4,876,877...4,887,275
JBrowse link
G Irak3 interleukin 1 receptor associated kinase 3 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936545:4,233,353...4,284,324
Ensembl chrNW_004936545:4,233,358...4,282,806
JBrowse link
G Nlrx1 NLR family member X1 involved_in
acts_upstream_of_or_within
IEA
ISO
(PMID:21703540) Ensembl
MGI
PMID:21703540 GO_REF:0000107 NCBI chrNW_004936542:4,105,980...4,121,176
Ensembl chrNW_004936542:4,109,136...4,122,978
JBrowse link
G Nod2 nucleotide binding oligomerization domain containing 2 involved_in
acts_upstream_of_or_within
IEA
ISO
(PMID:15220916) Ensembl
MGI
PMID:15220916 GO_REF:0000107 NCBI chrNW_004936475:3,708,069...3,742,845
Ensembl chrNW_004936475:3,713,362...3,745,982
JBrowse link
G Prg2 proteoglycan 2, pro eosinophil major basic protein involved_in
acts_upstream_of_or_within
IEA
ISO
(PMID:16926417) Ensembl
MGI
PMID:16926417 GO_REF:0000107 NCBI chrNW_004936581:5,101,041...5,103,175
Ensembl chrNW_004936581:5,100,623...5,102,857
JBrowse link
G Tgfb1 transforming growth factor beta 1 involved_in ISS
IEA
AgBase
Ensembl
GO_REF:0000024 GO_REF:0000107 NCBI chrNW_004936661:3,742,080...3,758,266
Ensembl chrNW_004936661:3,742,066...3,758,272
JBrowse link
G Tgfb2 transforming growth factor beta 2 involved_in IEA
ISS
Ensembl
AgBase
GO_REF:0000024 GO_REF:0000107 NCBI chrNW_004936628:310,720...394,002
Ensembl chrNW_004936628:308,691...394,007
JBrowse link
G Tgfb3 transforming growth factor beta 3 involved_in ISS
IEA
AgBase
Ensembl
GO_REF:0000024 GO_REF:0000107 NCBI chrNW_004936488:4,986,712...5,008,728
Ensembl chrNW_004936488:4,986,748...5,008,496
JBrowse link
G Twist1 twist family bHLH transcription factor 1 involved_in
acts_upstream_of_or_within
IEA
ISO
(PMID:16831897) Ensembl
MGI
PMID:16831897 GO_REF:0000107 NCBI chrNW_004936546:5,331,220...5,332,669
Ensembl chrNW_004936546:5,331,863...5,332,555
JBrowse link
G Twist2 twist family bHLH transcription factor 2 acts_upstream_of_or_within ISO (PMID:16831897) MGI PMID:16831897 NCBI chrNW_004936745:2,067,272...2,067,948
Ensembl chrNW_004936745:2,028,286...2,067,948
JBrowse link
negative regulation of mast cell cytokine production term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Bcl6 BCL6 transcription repressor involved_in
acts_upstream_of_or_within
IEA
ISO
(PMID:15950739) Ensembl
MGI
PMID:15950739 GO_REF:0000107 NCBI chrNW_004936578:2,371,976...2,395,034
Ensembl chrNW_004936578:2,371,945...2,395,071
JBrowse link
G Hmox1 heme oxygenase 1 ISO RGD PMID:17234154 RGD:1601626 NCBI chrNW_004936492:5,042,353...5,049,216
Ensembl chrNW_004936492:5,042,330...5,049,311
JBrowse link
G Rabgef1 RAB guanine nucleotide exchange factor 1 involved_in
acts_upstream_of_or_within
IEA
ISO
(PMID:16533754) Ensembl
MGI
PMID:16533754 GO_REF:0000107 NCBI chrNW_004936543:7,405,070...7,447,940
Ensembl chrNW_004936543:7,404,944...7,447,173
JBrowse link
negative regulation of natural killer cell cytokine production term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Cd96 CD96 molecule involved_in
acts_upstream_of_or_within
IEA
ISO
(PMID:24658051) Ensembl
MGI
PMID:24658051 GO_REF:0000107 NCBI chrNW_004936834:432,538...522,118
Ensembl chrNW_004936834:434,877...522,411
JBrowse link
negative regulation of plasmacytoid dendritic cell cytokine production term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Bst2 bone marrow stromal cell antigen 2 involved_in ISO (PMID:19564354) UniProt PMID:19564354
negative regulation of T cell cytokine production term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Foxp3 forkhead box P3 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936721:1,118,376...1,125,282
Ensembl chrNW_004936721:1,118,782...1,132,308
JBrowse link
G Hfe homeostatic iron regulator involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936671:1,940,079...1,947,574
Ensembl chrNW_004936671:1,940,101...1,947,580
JBrowse link
G LOC101970885 lymphotactin involved_in ISO (PMID:10887101) BHF-UCL PMID:10887101 NCBI chrNW_004936481:17,825,714...17,828,955 JBrowse link
G Slamf1 signaling lymphocytic activation molecule family member 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936740:55,941...92,100
Ensembl chrNW_004936740:55,941...92,100
JBrowse link
G Smad7 SMAD family member 7 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936497:13,894,586...13,921,978
Ensembl chrNW_004936497:13,894,580...13,922,065
JBrowse link
negative regulation of T-helper 2 cell cytokine production term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ifnb1 interferon beta 1 involved_in ISO (PMID:20554961) UniProt PMID:20554961 NCBI chrNW_004936652:2,736,270...2,736,833 JBrowse link
G Tbx21 T-box transcription factor 21 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936490:13,546,405...13,558,635
Ensembl chrNW_004936490:13,546,292...13,558,635
JBrowse link
positive regulation of antibacterial peptide biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Nod2 nucleotide binding oligomerization domain containing 2 involved_in
acts_upstream_of_or_within
IEA
ISO
(PMID:18167348) Ensembl
MGI
PMID:18167348 GO_REF:0000107 NCBI chrNW_004936475:3,708,069...3,742,845
Ensembl chrNW_004936475:3,713,362...3,745,982
JBrowse link
positive regulation of antibacterial peptide production term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Klk5 kallikrein related peptidase 5 involved_in IEA Ensembl
TreeGrafter
GO_REF:0000107 GO_REF:0000118 NCBI chrNW_004936889:609,807...616,777
Ensembl chrNW_004936889:610,172...617,088
JBrowse link
G Klk7 kallikrein related peptidase 7 involved_in IEA Ensembl
TreeGrafter
GO_REF:0000107 GO_REF:0000118 NCBI chrNW_004936889:637,526...641,126
Ensembl chrNW_004936889:637,996...641,126
JBrowse link
G Pgc progastricsin involved_in ISO (PMID:12759353) UniProt PMID:12759353 NCBI chrNW_004936476:18,039,709...18,046,510 JBrowse link
positive regulation of antimicrobial peptide production term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Il17a interleukin 17A involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936476:8,621,860...8,625,008
Ensembl chrNW_004936476:8,621,860...8,625,008
JBrowse link
G Il17f interleukin 17F involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936476:8,579,282...8,580,916
Ensembl chrNW_004936476:8,574,387...8,580,916
JBrowse link
positive regulation of biosynthetic process of antibacterial peptides active against Gram-positive bacteria term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Nod2 nucleotide binding oligomerization domain containing 2 involved_in
acts_upstream_of_or_within
IEA
ISO
(PMID:15692051) Ensembl
MGI
PMID:15692051 GO_REF:0000107 NCBI chrNW_004936475:3,708,069...3,742,845
Ensembl chrNW_004936475:3,713,362...3,745,982
JBrowse link
positive regulation of cytokine production involved in immune response term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Clec7a C-type lectin domain containing 7A involved_in IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004936902:436,224...446,435 JBrowse link
G F2rl1 F2R like trypsin receptor 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936549:142,281...153,575
Ensembl chrNW_004936549:141,512...153,602
JBrowse link
G Ffar3 free fatty acid receptor 3 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936570:949,575...951,442 JBrowse link
G Hk1 hexokinase 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936521:9,067,062...9,139,112
Ensembl chrNW_004936521:9,066,999...9,159,793
JBrowse link
G Htr2a 5-hydroxytryptamine receptor 2A ISO RGD PMID:19318092 RGD:401901206 NCBI chrNW_004936565:335,238...394,683
Ensembl chrNW_004936565:334,393...394,715
JBrowse link
G Inava innate immunity activator involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936567:3,443,053...3,458,184
Ensembl chrNW_004936567:3,443,042...3,464,506
JBrowse link
G Irf5 interferon regulatory factor 5 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936579:6,138,372...6,149,531
Ensembl chrNW_004936579:6,138,281...6,145,205
JBrowse link
G Laptm5 lysosomal protein transmembrane 5 involved_in ISO (PMID:22733818) ARUK-UCL PMID:22733818 NCBI chrNW_004936474:14,102,080...14,119,592
Ensembl chrNW_004936474:14,102,423...14,119,558
JBrowse link
G LOC101971238 free fatty acid receptor 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936570:895,364...896,356
Ensembl chrNW_004936570:895,364...896,356
JBrowse link
G LOC101974441 purine nucleoside phosphorylase LACC1 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936791:80,245...91,172
Ensembl chrNW_004936791:80,245...93,951
JBrowse link
G Nlrp3 NLR family pyrin domain containing 3 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936864:709,693...732,119
Ensembl chrNW_004936864:709,709...731,718
JBrowse link
G Nod2 nucleotide binding oligomerization domain containing 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936475:3,708,069...3,742,845
Ensembl chrNW_004936475:3,713,362...3,745,982
JBrowse link
G Scimp SLP adaptor and CSK interacting membrane protein involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936677:2,575,255...2,585,969
Ensembl chrNW_004936677:2,579,010...2,586,002
JBrowse link
G Sphk2 sphingosine kinase 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936664:2,668,708...2,676,608
Ensembl chrNW_004936664:2,669,920...2,676,587
JBrowse link
G Tek TEK receptor tyrosine kinase acts_upstream_of_or_within ISO (PMID:20060382) MGI PMID:20060382 NCBI chrNW_004936611:2,420,176...2,531,726
Ensembl chrNW_004936611:2,420,172...2,531,722
JBrowse link
G Tnfrsf14 TNF receptor superfamily member 14 acts_upstream_of_or_within ISO (PMID:21236258) MGI PMID:21236258 NCBI chrNW_004936737:1,008,228...1,013,575 JBrowse link
G Trim6 tripartite motif containing 6 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004937097:23,695...31,673
Ensembl chrNW_004937097:24,911...31,681
JBrowse link
G Wnt5a Wnt family member 5A involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936473:6,031,627...6,052,211
Ensembl chrNW_004936473:6,029,976...6,052,159
JBrowse link
positive regulation of dendritic cell cytokine production term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Clec7a C-type lectin domain containing 7A involved_in ISO (PMID:19136564)
(PMID:27288407)
ARUK-UCL
UniProt
PMID:19136564 PMID:27288407 NCBI chrNW_004936902:436,224...446,435 JBrowse link
G Kit KIT proto-oncogene, receptor tyrosine kinase involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936482:17,162,854...17,238,319
Ensembl chrNW_004936482:17,162,950...17,238,274
JBrowse link
G Nod2 nucleotide binding oligomerization domain containing 2 ISO RGD PMID:16818757 RGD:1600784 NCBI chrNW_004936475:3,708,069...3,742,845
Ensembl chrNW_004936475:3,713,362...3,745,982
JBrowse link
G Plcg2 phospholipase C gamma 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936475:29,248,533...29,377,335
Ensembl chrNW_004936475:29,248,516...29,377,206
JBrowse link
G Scimp SLP adaptor and CSK interacting membrane protein involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936677:2,575,255...2,585,969
Ensembl chrNW_004936677:2,579,010...2,586,002
JBrowse link
positive regulation of granzyme A production term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G LOC101970885 lymphotactin involved_in ISO (PMID:18832695) BHF-UCL PMID:18832695 NCBI chrNW_004936481:17,825,714...17,828,955 JBrowse link
positive regulation of granzyme B production term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Cd244 CD244 molecule involved_in ISO (PMID:11714776) UniProt PMID:11714776 NCBI chrNW_004936903:146,108...162,410 JBrowse link
G LOC101970885 lymphotactin involved_in ISO (PMID:18832695) BHF-UCL PMID:18832695 NCBI chrNW_004936481:17,825,714...17,828,955 JBrowse link
G Ptpn22 protein tyrosine phosphatase non-receptor type 22 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936690:2,180,804...2,232,869
Ensembl chrNW_004936690:2,181,047...2,232,958
JBrowse link
positive regulation of immunoglobulin production term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Btk Bruton tyrosine kinase ISO RGD PMID:28352114 RGD:151665126 NCBI chrNW_004936813:429,400...467,481
Ensembl chrNW_004936813:429,224...463,441
JBrowse link
G Cd37 CD37 molecule acts_upstream_of_or_within ISO (PMID:10891477) MGI PMID:10891477 NCBI chrNW_004936664:3,237,747...3,242,824
Ensembl chrNW_004936664:3,237,597...3,242,806
JBrowse link
G Cd86 CD86 molecule involved_in ISO (PMID:23241883) UniProt PMID:23241883 NCBI chrNW_004936536:8,414,491...8,481,712 JBrowse link
G Clcf1 cardiotrophin like cytokine factor 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936599:2,372,889...2,376,316
Ensembl chrNW_004936599:2,372,031...2,376,939
JBrowse link
G Dnajb9 DnaJ heat shock protein family (Hsp40) member B9 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936653:1,554,534...1,558,832
Ensembl chrNW_004936653:1,554,553...1,559,170
JBrowse link
G Ephb2 EPH receptor B2 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936474:8,109,800...8,203,106
Ensembl chrNW_004936474:8,109,031...8,203,106
JBrowse link
G Foxp1 forkhead box P1 acts_upstream_of_or_within ISO (PMID:16819554) MGI PMID:16819554 NCBI chrNW_004936603:2,631,781...3,146,104
Ensembl chrNW_004936603:2,632,274...2,830,324
JBrowse link
G Galnt2 polypeptide N-acetylgalactosaminyltransferase 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936484:19,894,682...19,990,214
Ensembl chrNW_004936484:19,893,513...19,990,215
JBrowse link
G Gpi glucose-6-phosphate isomerase involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936570:1,582,120...1,608,537
Ensembl chrNW_004936570:1,579,372...1,608,788
JBrowse link
G Hpx hemopexin involved_in
acts_upstream_of_or_within
IEA
ISO
(PMID:18641331) Ensembl
MGI
PMID:18641331 GO_REF:0000107 NCBI chrNW_004936842:485,515...495,684
Ensembl chrNW_004936842:485,517...494,742
JBrowse link
G Il10 interleukin 10 acts_upstream_of
involved_in
ISO
IEA
(PMID:22962438) ARUK-UCL
Ensembl
PMID:22962438 GO_REF:0000107 NCBI chrNW_004936557:5,834,874...5,838,502
Ensembl chrNW_004936557:5,834,874...5,838,502
JBrowse link
G Il13 interleukin 13 acts_upstream_of_or_within
involved_in
ISO
IEA
IgE production after infection
(PMID:15944273)
RGD
MGI
Ensembl
PMID:11573960 PMID:15944273 GO_REF:0000107 RGD:633067 NCBI chrNW_004936647:2,529,933...2,532,503
Ensembl chrNW_004936647:2,530,491...2,532,373
JBrowse link
G Il13ra1 interleukin 13 receptor subunit alpha 1 ISO IgE production after infection RGD PMID:11573960 RGD:633067 NCBI chrNW_004936479:11,052,077...11,108,915
Ensembl chrNW_004936479:11,050,249...11,108,909
JBrowse link
G Il2 interleukin 2 acts_upstream_of
acts_upstream_of_or_within
involved_in
ISO
IEA
(PMID:22962438)
(PMID:1830926)
ARUK-UCL
MGI
Ensembl
PMID:1830926 PMID:22962438 GO_REF:0000107 NCBI chrNW_004936662:1,594,953...1,599,625
Ensembl chrNW_004936662:1,594,953...1,599,625
JBrowse link
G Il21 interleukin 21 involved_in ISO (PMID:23045607) UniProt PMID:23045607 NCBI chrNW_004936662:1,689,879...1,696,883
Ensembl chrNW_004936662:1,689,879...1,696,883
JBrowse link
G Il33 interleukin 33 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936539:763,755...791,461
Ensembl chrNW_004936539:623,248...791,470
JBrowse link
G Il4r interleukin 4 receptor involved_in
acts_upstream_of_or_within
IEA
ISO
(PMID:15944273) Ensembl
MGI
PMID:15944273 GO_REF:0000107 NCBI chrNW_004936501:11,025,590...11,058,807
Ensembl chrNW_004936501:11,025,567...11,058,818
JBrowse link
G Il5 interleukin 5 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936647:2,647,982...2,651,477
Ensembl chrNW_004936647:2,648,241...2,651,430
JBrowse link
G Il6 interleukin 6 involved_in ISO (PMID:3491322)
(PMID:23045607)
BHF-UCL
UniProt
PMID:3491322 PMID:23045607 NCBI chrNW_004936549:7,015,595...7,016,246 JBrowse link
G LOC101961439 twinfilin-2 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936529:3,538,813...3,555,562
Ensembl chrNW_004936529:3,538,862...3,555,593
JBrowse link
G Mzb1 marginal zone B and B1 cell specific protein involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936531:8,474,721...8,477,479
Ensembl chrNW_004936531:8,474,954...8,476,936
JBrowse link
G Phb1 prohibitin 1 involved_in ISO (PMID:23241883) UniProt PMID:23241883 NCBI chrNW_004936490:12,127,065...12,138,870
Ensembl chrNW_004936490:12,127,065...12,138,870
JBrowse link
G Phb2 prohibitin 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936709:854,493...859,182
Ensembl chrNW_004936709:854,698...858,851
JBrowse link
G Ptprc protein tyrosine phosphatase receptor type C involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936567:5,266,653...5,378,464
Ensembl chrNW_004936567:5,267,615...5,378,258
JBrowse link
G Rbp4 retinol binding protein 4 involved_in ISO (PMID:10944490) BHF-UCL PMID:10944490 NCBI chrNW_004936601:1,401,215...1,410,195
Ensembl chrNW_004936601:1,402,691...1,410,208
JBrowse link
G Sash3 SAM and SH3 domain containing 3 involved_in
acts_upstream_of_or_within
IEA
ISO
(PMID:16227612) Ensembl
TreeGrafter
MGI
PMID:16227612 GO_REF:0000107 GO_REF:0000118 NCBI chrNW_004936479:1,752,180...1,765,330
Ensembl chrNW_004936479:1,750,746...1,765,361
JBrowse link
G Stx4 syntaxin 4 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936501:13,401,095...13,408,316
Ensembl chrNW_004936501:13,401,989...13,408,325
JBrowse link
G Tnf tumor necrosis factor ISO RGD PMID:23333565 RGD:7245573 NCBI chrNW_004936727:1,936,066...1,937,766
Ensembl chrNW_004936727:1,936,066...1,937,766
JBrowse link
G Tnfrsf4 TNF receptor superfamily member 4 involved_in ISO (PMID:7749983) BHF-UCL PMID:7749983 NCBI chrNW_004936737:1,901,749...1,904,382 JBrowse link
G Tnfsf4 TNF superfamily member 4 involved_in ISO (PMID:7749983) BHF-UCL PMID:7749983 NCBI chrNW_004936481:14,391,359...14,409,514 JBrowse link
G Vamp3 vesicle associated membrane protein 3 NOT|involved_in ISO (PMID:24055037) UniProt PMID:24055037 NCBI chrNW_004936623:2,280,534...2,287,898 JBrowse link
G Xbp1 X-box binding protein 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936657:2,891,171...2,895,409
Ensembl chrNW_004936657:2,891,907...2,896,174
JBrowse link
positive regulation of immunoglobulin production in mucosal tissue term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G LOC101970885 lymphotactin involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936481:17,825,714...17,828,955 JBrowse link
positive regulation of interleukin-4-dependent isotype switching to IgE isotypes term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Tnfsf4 TNF superfamily member 4 involved_in ISO (PMID:12496423) BHF-UCL PMID:12496423 NCBI chrNW_004936481:14,391,359...14,409,514 JBrowse link
positive regulation of isotype switching term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Exosc3 exosome component 3 involved_in
acts_upstream_of_or_within
IEA
ISO
(PMID:21255825) Ensembl
MGI
PMID:21255825 GO_REF:0000107 NCBI chrNW_004936524:5,580,855...5,586,170
Ensembl chrNW_004936524:5,581,090...5,586,128
JBrowse link
G Exosc6 exosome component 6 involved_in
acts_upstream_of_or_within
IEA
ISO
(PMID:21255825) Ensembl
MGI
PMID:21255825 GO_REF:0000107 NCBI chrNW_004936475:23,295,441...23,297,321
Ensembl chrNW_004936475:23,295,500...23,296,318
JBrowse link
G Hmces 5-hydroxymethylcytosine binding, ES cell specific involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936798:261,566...284,480
Ensembl chrNW_004936798:261,661...273,011
JBrowse link
G Kmt5b lysine methyltransferase 5B involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936599:1,928,172...1,983,983
Ensembl chrNW_004936599:1,928,145...1,984,008
JBrowse link
G Kmt5c lysine methyltransferase 5C involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936886:596,949...602,959
Ensembl chrNW_004936886:595,782...604,286
JBrowse link
G Mad2l2 mitotic arrest deficient 2 like 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936474:538,703...542,901
Ensembl chrNW_004936474:538,625...542,901
JBrowse link
G Paxip1 PAX interacting protein 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936527:9,440,129...9,488,215
Ensembl chrNW_004936527:9,440,036...9,484,245
JBrowse link
G Rif1 replication timing regulatory factor 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936469:26,045,500...26,105,980
Ensembl chrNW_004936469:26,048,953...26,105,997
JBrowse link
G Shld1 shieldin complex subunit 1 involved_in IEA Ensembl
TreeGrafter
GO_REF:0000107 GO_REF:0000118 NCBI chrNW_004936485:13,179,218...13,267,980
Ensembl chrNW_004936485:13,176,426...13,267,953
JBrowse link
G Shld2 shieldin complex subunit 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936601:5,315,297...5,400,752
Ensembl chrNW_004936601:5,315,261...5,396,301
JBrowse link
G Shld3 shieldin complex subunit 3 involved_in ISO (PMID:29656893) UniProt PMID:29656893
G Tfrc transferrin receptor involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936784:696,738...728,385
Ensembl chrNW_004936784:696,713...728,543
JBrowse link
G Tp53bp1 tumor protein p53 binding protein 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936471:6,589,395...6,668,242
Ensembl chrNW_004936471:6,589,564...6,668,305
JBrowse link
positive regulation of isotype switching to IgA isotypes term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Mlh1 mutL homolog 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936473:26,556,636...26,600,830
Ensembl chrNW_004936473:26,556,611...26,603,736
JBrowse link
G Msh2 mutS homolog 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936508:4,943,987...5,013,356
Ensembl chrNW_004936508:4,944,007...5,013,356
JBrowse link
G Nsd2 nuclear receptor binding SET domain protein 2 involved_in
acts_upstream_of_or_within
IEA
ISO
(PMID:23241889) Ensembl
MGI
PMID:23241889 GO_REF:0000107 NCBI chrNW_004936477:21,460,442...21,531,563
Ensembl chrNW_004936477:21,460,478...21,534,909
JBrowse link
G Pms2 PMS1 homolog 2, mismatch repair system component involved_in ISO (PMID:10430621) CAFA PMID:10430621 NCBI chrNW_004936750:439,396...468,747 JBrowse link
G Tgfb1 transforming growth factor beta 1 acts_upstream_of_or_within
involved_in
ISO
IEA
ISS
(PMID:14988498) MGI
Ensembl
AgBase
PMID:14988498 GO_REF:0000024 GO_REF:0000107 NCBI chrNW_004936661:3,742,080...3,758,266
Ensembl chrNW_004936661:3,742,066...3,758,272
JBrowse link
G Tnfsf13 TNF superfamily member 13 acts_upstream_of_or_within
involved_in
ISO
IEA
(PMID:14988498) MGI
TreeGrafter
Ensembl
PMID:14988498 GO_REF:0000107 GO_REF:0000118 NCBI chrNW_004936595:839,877...842,962
Ensembl chrNW_004936595:839,877...842,962
JBrowse link
positive regulation of isotype switching to IgE isotypes term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Clcf1 cardiotrophin like cytokine factor 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936599:2,372,889...2,376,316
Ensembl chrNW_004936599:2,372,031...2,376,939
JBrowse link
G Stat6 signal transducer and activator of transcription 6 involved_in
acts_upstream_of_or_within
IEA
ISO
(PMID:10490661) Ensembl
MGI
PMID:10490661 GO_REF:0000107 NCBI chrNW_004936646:1,297,530...1,312,508
Ensembl chrNW_004936646:1,296,290...1,312,157
JBrowse link
positive regulation of isotype switching to IgG isotypes term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Atad5 ATPase family AAA domain containing 5 involved_in
acts_upstream_of_or_within
IEA
ISO
(PMID:25404367) Ensembl
MGI
PMID:25404367 GO_REF:0000107 NCBI chrNW_004936538:2,815,370...2,877,084
Ensembl chrNW_004936538:2,811,174...2,874,113
JBrowse link
G Cd28 CD28 molecule involved_in
acts_upstream_of_or_within
IEA
ISO
(PMID:7688139) Ensembl
MGI
PMID:7688139 GO_REF:0000107 NCBI chrNW_004936631:335,411...363,407
Ensembl chrNW_004936631:335,411...363,407
JBrowse link
G Cd40 CD40 molecule involved_in
acts_upstream_of_or_within
IEA
ISO
(PMID:12882831) Ensembl
MGI
PMID:12882831 GO_REF:0000107 NCBI chrNW_004936514:6,936,915...6,947,246
Ensembl chrNW_004936514:6,936,572...6,947,280
JBrowse link
G Ifng interferon gamma acts_upstream_of_or_within ISO (PMID:12882831) MGI PMID:12882831 NCBI chrNW_004936545:6,139,130...6,144,543
Ensembl chrNW_004936545:6,139,116...6,148,452
JBrowse link
G Il2 interleukin 2 involved_in
acts_upstream_of_or_within
IEA
ISO
(PMID:1830926) Ensembl
MGI
PMID:1830926 GO_REF:0000107 NCBI chrNW_004936662:1,594,953...1,599,625
Ensembl chrNW_004936662:1,594,953...1,599,625
JBrowse link
G Mlh1 mutL homolog 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936473:26,556,636...26,600,830
Ensembl chrNW_004936473:26,556,611...26,603,736
JBrowse link
G Msh2 mutS homolog 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936508:4,943,987...5,013,356
Ensembl chrNW_004936508:4,944,007...5,013,356
JBrowse link
G Pagr1 PAXIP1 associated glutamate rich protein 1 involved_in ISO (PMID:26744420) UniProt PMID:26744420 NCBI chrNW_004936501:12,657,092...12,660,106
Ensembl chrNW_004936501:12,656,435...12,660,067
JBrowse link
G Paxip1 PAX interacting protein 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936527:9,440,129...9,488,215
Ensembl chrNW_004936527:9,440,036...9,484,245
JBrowse link
G Pms2 PMS1 homolog 2, mismatch repair system component involved_in ISO (PMID:10430621) CAFA PMID:10430621 NCBI chrNW_004936750:439,396...468,747 JBrowse link
G Ptprc protein tyrosine phosphatase receptor type C involved_in
acts_upstream_of_or_within
IEA
ISO
(PMID:9015183) Ensembl
MGI
PMID:9015183 GO_REF:0000107 NCBI chrNW_004936567:5,266,653...5,378,464
Ensembl chrNW_004936567:5,267,615...5,378,258
JBrowse link
G Tbx21 T-box transcription factor 21 involved_in
acts_upstream_of_or_within
IEA
ISO
(PMID:12882831) Ensembl
MGI
PMID:12882831 GO_REF:0000107 NCBI chrNW_004936490:13,546,405...13,558,635
Ensembl chrNW_004936490:13,546,292...13,558,635
JBrowse link
positive regulation of macrophage cytokine production term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Card9 caspase recruitment domain family member 9 involved_in
acts_upstream_of_or_within
IEA
ISO
(PMID:17187069) Ensembl
MGI
PMID:17187069 GO_REF:0000107 NCBI chrNW_004936669:1,428,208...1,438,012
Ensembl chrNW_004936669:1,429,594...1,438,005
JBrowse link
G Cd36 CD36 molecule (CD36 blood group) involved_in
acts_upstream_of_or_within
IEA
ISO
(PMID:16061696)
(PMID:15690042)
Ensembl
MGI
PMID:15690042 PMID:16061696 GO_REF:0000107 NCBI chrNW_004936810:791,823...838,303
Ensembl chrNW_004936810:758,182...838,365
JBrowse link
G Cd74 CD74 molecule involved_in IEA Ensembl
TreeGrafter
GO_REF:0000107 GO_REF:0000118 NCBI chrNW_004936504:4,522,576...4,532,289
Ensembl chrNW_004936504:4,522,751...4,531,750
JBrowse link
G Gprc5b G protein-coupled receptor class C group 5 member B involved_in ISO (PMID:23169819) UniProt PMID:23169819 NCBI chrNW_004936501:5,465,844...5,485,291
Ensembl chrNW_004936501:5,461,736...5,485,356
JBrowse link
G Ifng interferon gamma acts_upstream_of_or_within ISO (PMID:9348310) MGI PMID:9348310 NCBI chrNW_004936545:6,139,130...6,144,543
Ensembl chrNW_004936545:6,139,116...6,148,452
JBrowse link
G Laptm5 lysosomal protein transmembrane 5 involved_in ISO (PMID:22733818) ARUK-UCL PMID:22733818 NCBI chrNW_004936474:14,102,080...14,119,592
Ensembl chrNW_004936474:14,102,423...14,119,558
JBrowse link
G LOC101954543 caspase-1-like involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936551:3,230,060...3,240,496 JBrowse link
G LOC101964473 caspase-4-like involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936551:3,242,381...3,269,821 JBrowse link
G Mapkapk2 MAPK activated protein kinase 2 involved_in
acts_upstream_of_or_within
IEA
ISO
(PMID:24020373) Ensembl
MGI
PMID:24020373 GO_REF:0000107 NCBI chrNW_004936557:5,867,182...5,911,207
Ensembl chrNW_004936557:5,867,211...5,911,213
JBrowse link
G Myd88 MYD88 innate immune signal transduction adaptor involved_in
acts_upstream_of_or_within
IEA
ISO
(PMID:12872135)
(PMID:10607756), (PMID:11067888), (PMID:12872135)
Ensembl
MGI
PMID:10607756 PMID:11067888 PMID:12872135 GO_REF:0000107 NCBI chrNW_004936473:27,672,237...27,676,339
Ensembl chrNW_004936473:27,671,797...27,676,372
JBrowse link
G Nod1 nucleotide binding oligomerization domain containing 1 involved_in
acts_upstream_of_or_within
IEA
ISO
(PMID:18261938) Ensembl
MGI
PMID:18261938 GO_REF:0000107 NCBI chrNW_004936478:6,717,354...6,768,293
Ensembl chrNW_004936478:6,715,245...6,768,372
JBrowse link
G Nod2 nucleotide binding oligomerization domain containing 2 involved_in
acts_upstream_of_or_within
IEA
ISO
(PMID:15692051), (PMID:18261938)
(PMID:15220916), (PMID:18261938)
(PMID:18261938)
(PMID:14560001), (PMID:15220916)
Ensembl
MGI
PMID:14560001 PMID:15220916 PMID:15692051 PMID:18261938 GO_REF:0000107 NCBI chrNW_004936475:3,708,069...3,742,845
Ensembl chrNW_004936475:3,713,362...3,745,982
JBrowse link
G P2rx7 purinergic receptor P2X 7 involved_in
acts_upstream_of_or_within
IEA
ISO
(PMID:11016935)
(PMID:18490713)
Ensembl
MGI
PMID:11016935 PMID:18490713 GO_REF:0000107 NCBI chrNW_004936558:3,106,819...3,149,689
Ensembl chrNW_004936558:3,108,283...3,149,765
JBrowse link
G Panx1 pannexin 1 involved_in
acts_upstream_of_or_within
IEA
ISO
(PMID:18490713) Ensembl
MGI
PMID:18490713 GO_REF:0000107 NCBI chrNW_004936674:736,911...773,406
Ensembl chrNW_004936674:736,905...773,412
JBrowse link
G Plcg2 phospholipase C gamma 2 involved_in
acts_upstream_of
IEA
ISO
(PMID:22041900) Ensembl
ARUK-UCL
PMID:22041900 GO_REF:0000107 NCBI chrNW_004936475:29,248,533...29,377,335
Ensembl chrNW_004936475:29,248,516...29,377,206
JBrowse link
G Pycard PYD and CARD domain containing involved_in
acts_upstream_of_or_within
IEA
ISO
(PMID:22002608) Ensembl
MGI
PMID:22002608 GO_REF:0000107 NCBI chrNW_004936501:13,550,702...13,552,774
Ensembl chrNW_004936501:13,550,679...13,552,805
JBrowse link
G Ripk2 receptor interacting serine/threonine kinase 2 involved_in
acts_upstream_of_or_within
IEA
ISO
(PMID:11894098), (PMID:18261938) Ensembl
MGI
PMID:11894098 PMID:18261938 GO_REF:0000107 NCBI chrNW_004936544:3,606,925...3,653,248
Ensembl chrNW_004936544:3,606,879...3,655,532
JBrowse link
G Rtn4 reticulon 4 involved_in ISO (PMID:19805174) UniProt PMID:19805174 NCBI chrNW_004936491:1,407,414...1,474,031
Ensembl chrNW_004936491:1,407,414...1,474,360
JBrowse link
G Sema7a semaphorin 7A (JohnMiltonHagen blood group) involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936471:33,430,589...33,454,353
Ensembl chrNW_004936471:33,431,889...33,454,311
JBrowse link
G Sirt1 sirtuin 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936521:10,296,097...10,316,673
Ensembl chrNW_004936521:10,296,097...10,322,215
JBrowse link
G Spon2 spondin 2 involved_in
acts_upstream_of_or_within
IEA
ISO
(PMID:14691481) Ensembl
MGI
PMID:14691481 GO_REF:0000107 NCBI chrNW_004936477:22,087,450...22,093,677
Ensembl chrNW_004936477:22,087,394...22,093,723
JBrowse link
G Ticam1 toll like receptor adaptor molecule 1 acts_upstream_of_or_within ISO (PMID:12872135)
(PMID:12855817)
MGI PMID:12855817 PMID:12872135 NCBI chrNW_004936588:2,818,909...2,827,797 JBrowse link
G Tirap TIR domain containing adaptor protein acts_upstream_of_or_within ISO (PMID:15690042) MGI PMID:15690042 NCBI chrNW_004936572:5,926,193...5,938,621
Ensembl chrNW_004936572:5,924,158...5,938,658
JBrowse link
G Tlr2 toll like receptor 2 acts_upstream_of_or_within ISO (PMID:15690042)
(PMID:10549626), (PMID:11067888)
(PMID:18261938)
MGI PMID:10549626 PMID:11067888 PMID:15690042 PMID:18261938 NCBI chrNW_004936576:522,234...531,660
Ensembl chrNW_004936576:527,434...529,788
JBrowse link
G Tlr3 toll like receptor 3 involved_in
acts_upstream_of_or_within
IEA
ISO
(PMID:12855817)
(PMID:18261938)
Ensembl
MGI
PMID:12855817 PMID:18261938 GO_REF:0000107 NCBI chrNW_004936554:3,370,766...3,388,125
Ensembl chrNW_004936554:3,369,469...3,385,907
JBrowse link
G Tlr4 toll like receptor 4 involved_in
acts_upstream_of_or_within
IEA
ISO
(PMID:10549626), (PMID:10607756), (PMID:15661922)
(PMID:14691481)
(PMID:10623794)
(PMID:18261938), (PMID:21609717)
Ensembl
MGI
PMID:10549626 PMID:10607756 PMID:10623794 PMID:14691481 PMID:15661922 More... GO_REF:0000107 NCBI chrNW_004936487:6,519,140...6,532,018
Ensembl chrNW_004936487:6,518,441...6,533,095
JBrowse link
G Tlr7 toll like receptor 7 involved_in
acts_upstream_of_or_within
IEA
ISO
(PMID:18261938) Ensembl
MGI
PMID:18261938 GO_REF:0000107 NCBI chrNW_004936470:2,593,544...2,610,972
Ensembl chrNW_004936470:2,607,508...2,610,675
JBrowse link
G Wnt5a Wnt family member 5A involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936473:6,031,627...6,052,211
Ensembl chrNW_004936473:6,029,976...6,052,159
JBrowse link
positive regulation of mast cell cytokine production term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Fcer1a Fc fragment of IgE receptor Ia acts_upstream_of_or_within ISO (PMID:9000133) MGI PMID:9000133 NCBI chrNW_004936740:1,201,370...1,206,871 JBrowse link
G Fcer1g Fc fragment of IgE receptor Ig acts_upstream_of_or_within ISO (PMID:14764707) MGI PMID:14764707 NCBI chrNW_004936903:514,278...517,975
Ensembl chrNW_004936903:514,761...517,948
JBrowse link
G Kit KIT proto-oncogene, receptor tyrosine kinase involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936482:17,162,854...17,238,319
Ensembl chrNW_004936482:17,162,950...17,238,274
JBrowse link
G Nr4a3 nuclear receptor subfamily 4 group A member 3 involved_in ISO (PMID:24586680) UniProt PMID:24586680 NCBI chrNW_004936524:8,252,321...8,290,747
Ensembl chrNW_004936524:8,252,381...8,289,157
JBrowse link
G Syk spleen associated tyrosine kinase involved_in
acts_upstream_of_or_within
IEA
ISO
(PMID:9000133) Ensembl
MGI
PMID:9000133 GO_REF:0000107 NCBI chrNW_004936780:1,553,605...1,601,036
Ensembl chrNW_004936780:1,553,605...1,598,158
JBrowse link
positive regulation of myeloid dendritic cell cytokine production term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Camk4 calcium/calmodulin dependent protein kinase IV NOT|involved_in ISO (PMID:17909078) UniProt PMID:17909078 NCBI chrNW_004936531:5,615,442...5,858,968
Ensembl chrNW_004936531:5,616,746...5,849,088
JBrowse link
G Ddx1 DEAD-box helicase 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936493:14,884,532...14,918,621
Ensembl chrNW_004936493:14,884,442...14,918,823
JBrowse link
G Ddx21 DExD-box helicase 21 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936521:9,426,544...9,448,973
Ensembl chrNW_004936521:9,429,015...9,448,890
JBrowse link
G Dhx36 DEAH-box helicase 36 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936519:1,946,684...1,987,036
Ensembl chrNW_004936519:1,946,652...1,987,070
JBrowse link
G Mavs mitochondrial antiviral signaling protein involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936485:14,842,778...14,859,163
Ensembl chrNW_004936485:14,842,160...14,859,202
JBrowse link
G Rigi RNA sensor RIG-I involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936524:1,141,840...1,200,638
Ensembl chrNW_004936524:1,140,971...1,200,638
JBrowse link
G Ticam1 toll like receptor adaptor molecule 1 involved_in ISO (PMID:21703541) UniProt PMID:21703541 NCBI chrNW_004936588:2,818,909...2,827,797 JBrowse link
positive regulation of myeloid leukocyte cytokine production involved in immune response term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Mif macrophage migration inhibitory factor involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936619:1,207,058...1,208,010
Ensembl chrNW_004936619:1,203,746...1,208,442
JBrowse link
positive regulation of natural killer cell cytokine production term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Cd160 CD160 molecule involved_in ISO (PMID:17307798) UniProt PMID:17307798 NCBI chrNW_004936867:478,625...485,905 JBrowse link
G Clnk cytokine dependent hematopoietic cell linker involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936477:16,364,465...16,427,125
Ensembl chrNW_004936477:16,280,978...16,427,110
JBrowse link
G Il21 interleukin 21 acts_upstream_of_or_within ISO (PMID:14764669) MGI PMID:14764669 NCBI chrNW_004936662:1,689,879...1,696,883
Ensembl chrNW_004936662:1,689,879...1,696,883
JBrowse link
positive regulation of T cell cytokine production term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G B2m beta-2-microglobulin involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936471:7,646,504...7,655,656
Ensembl chrNW_004936471:7,646,373...7,655,778
JBrowse link
G Cd55 CD55 molecule (Cromer blood group) involved_in ISO (PMID:16818763) UniProt PMID:16818763 NCBI chrNW_004936557:5,344,373...5,364,234 JBrowse link
G Cd7 CD7 molecule involved_in ISO (PMID:10652336) UniProt PMID:10652336 NCBI chrNW_004936594:5,777,361...5,783,533 JBrowse link
G Fzd5 frizzled class receptor 5 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936631:3,909,046...3,915,939
Ensembl chrNW_004936631:3,911,693...3,915,560
JBrowse link
G LOC101970885 lymphotactin involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936481:17,825,714...17,828,955 JBrowse link
G Malt1 MALT1 paracaspase involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936497:5,854,361...5,910,719
Ensembl chrNW_004936497:5,853,870...5,904,266
JBrowse link
G Map3k7 mitogen-activated protein kinase kinase kinase 7 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936510:1,772,971...1,836,075
Ensembl chrNW_004936510:1,772,971...1,837,765
JBrowse link
G Sash3 SAM and SH3 domain containing 3 involved_in
acts_upstream_of_or_within
IEA
ISO
(PMID:16227612) Ensembl
MGI
PMID:16227612 GO_REF:0000107 NCBI chrNW_004936479:1,752,180...1,765,330
Ensembl chrNW_004936479:1,750,746...1,765,361
JBrowse link
G Sectm1 secreted and transmembrane 1 involved_in ISO (PMID:22184754) UniProt PMID:22184754 NCBI chrNW_004936594:5,782,469...5,794,967 JBrowse link
G Tnfsf4 TNF superfamily member 4 involved_in ISO (PMID:18354165), (PMID:9670042) BHF-UCL PMID:9670042 PMID:18354165 NCBI chrNW_004936481:14,391,359...14,409,514 JBrowse link
G Traf2 TNF receptor associated factor 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936669:1,004,891...1,034,913
Ensembl chrNW_004936669:1,003,528...1,029,249
JBrowse link
G Traf6 TNF receptor associated factor 6 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936533:1,857,685...1,874,973
Ensembl chrNW_004936533:1,857,666...1,876,120
JBrowse link
positive regulation of T-helper 1 cell cytokine production term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Arid5a AT-rich interaction domain 5A involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936744:539,150...545,021
Ensembl chrNW_004936744:537,168...546,017
JBrowse link
G Il18 interleukin 18 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936612:2,306,963...2,325,086
Ensembl chrNW_004936612:2,306,875...2,325,189
JBrowse link
G Il18r1 interleukin 18 receptor 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936713:1,038,985...1,075,770
Ensembl chrNW_004936713:1,038,877...1,075,811
JBrowse link
G Il1b interleukin 1 beta involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936783:1,251,678...1,256,807
Ensembl chrNW_004936783:1,252,158...1,257,165
JBrowse link
G Il1r1 interleukin 1 receptor type 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936713:808,761...881,070
Ensembl chrNW_004936713:808,659...881,076
JBrowse link
G LOC101970885 lymphotactin involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936481:17,825,714...17,828,955 JBrowse link
G Slamf1 signaling lymphocytic activation molecule family member 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936740:55,941...92,100
Ensembl chrNW_004936740:55,941...92,100
JBrowse link
G Tbx21 T-box transcription factor 21 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936490:13,546,405...13,558,635
Ensembl chrNW_004936490:13,546,292...13,558,635
JBrowse link
positive regulation of T-helper 2 cell cytokine production term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Cd81 CD81 molecule involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936794:664,089...670,294
Ensembl chrNW_004936794:664,115...669,800
JBrowse link
G Dennd1b DENN domain containing 1B involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936567:6,131,433...6,353,003
Ensembl chrNW_004936567:6,134,179...6,348,086
JBrowse link
G Gata3 GATA binding protein 3 involved_in
acts_upstream_of_or_within
IEA
ISO
(PMID:15087456) Ensembl
MGI
PMID:15087456 GO_REF:0000107 NCBI chrNW_004936484:6,780,692...6,800,883
Ensembl chrNW_004936484:6,780,692...6,800,966
JBrowse link
G Il6 interleukin 6 involved_in ISO (PMID:11159963) BHF-UCL PMID:11159963 NCBI chrNW_004936549:7,015,595...7,016,246 JBrowse link
G LOC101970885 lymphotactin involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936481:17,825,714...17,828,955 JBrowse link
G Nlrp3 NLR family pyrin domain containing 3 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936864:709,693...732,119
Ensembl chrNW_004936864:709,709...731,718
JBrowse link
G Prkcz protein kinase C zeta involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936737:1,303,502...1,383,135
Ensembl chrNW_004936737:1,303,887...1,321,944
JBrowse link
G Rsad2 radical S-adenosyl methionine domain containing 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936532:3,921,824...3,936,027
Ensembl chrNW_004936532:3,921,807...3,936,042
JBrowse link
regulation of antibacterial peptide production term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Evpl envoplakin involved_in
acts_upstream_of_or_within
IEA
ISO
(PMID:27427436) Ensembl
MGI
PMID:27427436 GO_REF:0000107 NCBI chrNW_004936594:1,164,980...1,181,957
Ensembl chrNW_004936594:1,162,475...1,182,020
JBrowse link
G Ivl involucrin acts_upstream_of_or_within ISO (PMID:27427436) MGI PMID:27427436 NCBI chrNW_004936580:2,892,316...2,894,085 JBrowse link
G Ppl periplakin acts_upstream_of_or_within ISO (PMID:27427436) MGI PMID:27427436 NCBI chrNW_004936530:4,826,271...4,866,093
Ensembl chrNW_004936530:4,825,679...4,866,093
JBrowse link
regulation of cytokine production involved in immune response term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Atg5 autophagy related 5 involved_in
acts_upstream_of_or_within
IEA
ISO
(PMID:22710871) Ensembl
MGI
PMID:22710871 GO_REF:0000107 NCBI chrNW_004936564:2,759,085...2,885,394
Ensembl chrNW_004936564:2,758,598...2,885,420
JBrowse link
G Pkp3 plakophilin 3 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936888:270,883...280,118
Ensembl chrNW_004936888:270,873...280,121
JBrowse link
G Tnfrsf1b TNF receptor superfamily member 1B involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936474:908,414...935,765
Ensembl chrNW_004936474:908,485...934,177
JBrowse link
G Tril TLR4 interactor with leucine rich repeats involved_in ISO (PMID:19710467) UniProt PMID:19710467 NCBI chrNW_004936478:5,453,532...5,459,071 JBrowse link
regulation of dendritic cell cytokine production term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G LOC101961439 twinfilin-2 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936529:3,538,813...3,555,562
Ensembl chrNW_004936529:3,538,862...3,555,593
JBrowse link
G Tlr2 toll like receptor 2 acts_upstream_of_or_within ISO (PMID:19047410) MGI PMID:19047410 NCBI chrNW_004936576:522,234...531,660
Ensembl chrNW_004936576:527,434...529,788
JBrowse link
G Tlr3 toll like receptor 3 involved_in
acts_upstream_of_or_within
IEA
ISO
(PMID:19047410) Ensembl
MGI
PMID:19047410 GO_REF:0000107 NCBI chrNW_004936554:3,370,766...3,388,125
Ensembl chrNW_004936554:3,369,469...3,385,907
JBrowse link
G Tlr4 toll like receptor 4 involved_in
acts_upstream_of_or_within
IEA
ISO
(PMID:19047410) Ensembl
MGI
PMID:19047410 GO_REF:0000107 NCBI chrNW_004936487:6,519,140...6,532,018
Ensembl chrNW_004936487:6,518,441...6,533,095
JBrowse link
regulation of immunoglobulin production term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Cd40 CD40 molecule involved_in
acts_upstream_of_or_within
IEA
ISO
(PMID:12958312) Ensembl
MGI
PMID:12958312 GO_REF:0000107 NCBI chrNW_004936514:6,936,915...6,947,246
Ensembl chrNW_004936514:6,936,572...6,947,280
JBrowse link
G Cd40lg CD40 ligand involved_in
acts_upstream_of_or_within
IEA
ISO
(PMID:12958312) Ensembl
MGI
PMID:12958312 GO_REF:0000107 NCBI chrNW_004936513:10,607,617...10,620,403
Ensembl chrNW_004936513:10,607,617...10,620,403
JBrowse link
G Cgas cyclic GMP-AMP synthase acts_upstream_of_or_within ISO (PMID:26371324) MGI PMID:26371324 NCBI chrNW_004936859:797,469...807,036 JBrowse link
G Foxp3 forkhead box P3 involved_in
acts_upstream_of_or_within
IEA
ISO
(PMID:16275384) Ensembl
MGI
PMID:16275384 GO_REF:0000107 NCBI chrNW_004936721:1,118,376...1,125,282
Ensembl chrNW_004936721:1,118,782...1,132,308
JBrowse link
G Pkn1 protein kinase N1 involved_in
acts_upstream_of_or_within
IEA
ISO
(PMID:23223530) Ensembl
MGI
PMID:23223530 GO_REF:0000107 NCBI chrNW_004936659:2,990,905...3,014,553
Ensembl chrNW_004936659:2,990,937...3,014,485
JBrowse link
G Tnf tumor necrosis factor involved_in
acts_upstream_of_or_within
IEA
ISO
(PMID:12958312) Ensembl
MGI
PMID:12958312 GO_REF:0000107 NCBI chrNW_004936727:1,936,066...1,937,766
Ensembl chrNW_004936727:1,936,066...1,937,766
JBrowse link
G Traf2 TNF receptor associated factor 2 involved_in
acts_upstream_of_or_within
IEA
ISO
(PMID:12958312) Ensembl
MGI
PMID:12958312 GO_REF:0000107 NCBI chrNW_004936669:1,004,891...1,034,913
Ensembl chrNW_004936669:1,003,528...1,029,249
JBrowse link
G Traf6 TNF receptor associated factor 6 involved_in
acts_upstream_of_or_within
IEA
ISO
(PMID:12958312) Ensembl
MGI
PMID:12958312 GO_REF:0000107 NCBI chrNW_004936533:1,857,685...1,874,973
Ensembl chrNW_004936533:1,857,666...1,876,120
JBrowse link
G Trex1 three prime repair exonuclease 1 involved_in
acts_upstream_of_or_within
IEA
ISO
(PMID:26320659)
(PMID:26371324)
Ensembl
MGI
PMID:26320659 PMID:26371324 GO_REF:0000107 NCBI chrNW_004936529:264,535...266,451
Ensembl chrNW_004936529:264,468...266,422
JBrowse link
regulation of isotype switching term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Aplf aprataxin and PNKP like factor involved_in
acts_upstream_of_or_within
IEA
ISO
(PMID:21211721) Ensembl
MGI
PMID:21211721 GO_REF:0000107 NCBI chrNW_004936491:12,857,928...12,961,709
Ensembl chrNW_004936491:12,857,785...12,962,376
JBrowse link
G Supt6h SPT6 homolog, histone chaperone and transcription elongation factor involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936538:4,878,645...4,910,613
Ensembl chrNW_004936538:4,878,662...4,910,597
JBrowse link
regulation of isotype switching to IgG isotypes term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Foxp3 forkhead box P3 involved_in
acts_upstream_of_or_within
IEA
ISO
(PMID:16275384) Ensembl
MGI
PMID:16275384 GO_REF:0000107 NCBI chrNW_004936721:1,118,376...1,125,282
Ensembl chrNW_004936721:1,118,782...1,132,308
JBrowse link
G Il27ra interleukin 27 receptor subunit alpha involved_in
acts_upstream_of_or_within
IEA
ISO
(PMID:11057672) Ensembl
MGI
PMID:11057672 GO_REF:0000107 NCBI chrNW_004936659:2,706,037...2,720,486
Ensembl chrNW_004936659:2,705,985...2,722,748
JBrowse link
G Ndfip1 Nedd4 family interacting protein 1 acts_upstream_of_or_within ISO (PMID:17137798) MGI PMID:17137798 NCBI chrNW_004936504:12,053,470...12,103,346 JBrowse link
G Slc15a4 solute carrier family 15 member 4 involved_in ISO (PMID:25310967) UniProt PMID:25310967 NCBI chrNW_004936660:481,772...493,567 JBrowse link
regulation of macrophage cytokine production term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Litaf lipopolysaccharide induced TNF factor involved_in
acts_upstream_of_or_within
IEA
ISO
(PMID:16954198) Ensembl
MGI
PMID:16954198 GO_REF:0000107 NCBI chrNW_004936530:9,409,378...9,421,974
Ensembl chrNW_004936530:9,409,692...9,421,974
JBrowse link
G Ube2j1 ubiquitin conjugating enzyme E2 J1 involved_in
acts_upstream_of_or_within
IEA
ISO
(PMID:24020373) Ensembl
MGI
PMID:24020373 GO_REF:0000107 NCBI chrNW_004936510:2,864,321...2,887,588
Ensembl chrNW_004936510:2,864,356...2,887,885
JBrowse link
regulation of natural killer cell cytokine production term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Calhm6 calcium homeostasis modulator family member 6 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936824:1,019,124...1,020,871
Ensembl chrNW_004936824:1,019,154...1,020,961
JBrowse link
regulation of T cell cytokine production term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ccl20 C-C motif chemokine ligand 20 NOT|involved_in ISO (PMID:19050256) UniProt PMID:19050256 NCBI chrNW_004936525:8,238,128...8,240,974
Ensembl chrNW_004936525:8,237,831...8,240,974
JBrowse link
G LOC101964770 C-C chemokine receptor type 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936596:285,559...287,198
Ensembl chrNW_004936596:285,559...286,680
JBrowse link
G Tnfrsf1b TNF receptor superfamily member 1B involved_in IEA Ensembl
TreeGrafter
GO_REF:0000107 GO_REF:0000118 NCBI chrNW_004936474:908,414...935,765
Ensembl chrNW_004936474:908,485...934,177
JBrowse link
G Trpm4 transient receptor potential cation channel subfamily M member 4 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936664:3,093,258...3,124,473
Ensembl chrNW_004936664:3,093,367...3,124,117
JBrowse link
somatic diversification of immunoglobulins term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Aicda activation induced cytidine deaminase involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936870:25,039...34,601
Ensembl chrNW_004936870:25,039...34,601
JBrowse link
G Ctnnbl1 catenin beta like 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936561:3,434,232...3,589,341
Ensembl chrNW_004936561:3,434,731...3,589,341
JBrowse link
G Polb DNA polymerase beta involved_in
acts_upstream_of_or_within
IEA
ISO
(PMID:24388753) Ensembl
MGI
PMID:24388753 GO_REF:0000107 NCBI chrNW_004936785:324,655...350,496
Ensembl chrNW_004936785:323,941...350,539
JBrowse link
somatic hypermutation of immunoglobulin genes term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Aicda activation induced cytidine deaminase involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936870:25,039...34,601
Ensembl chrNW_004936870:25,039...34,601
JBrowse link
G Exo1 exonuclease 1 acts_upstream_of_or_within ISO (PMID:14716311) MGI PMID:14716311 NCBI chrNW_004936526:8,570,488...8,627,004 JBrowse link
G Hmces 5-hydroxymethylcytosine binding, ES cell specific involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936798:261,566...284,480
Ensembl chrNW_004936798:261,661...273,011
JBrowse link
G Mcm3ap minichromosome maintenance complex component 3 associated protein involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936778:273,152...318,157
Ensembl chrNW_004936778:273,909...319,232
JBrowse link
G Mlh1 mutL homolog 1 involved_in
acts_upstream_of_or_within
IEA
ISO
(PMID:10092760), (PMID:10429667) Ensembl
TreeGrafter
MGI
PMID:10092760 PMID:10429667 GO_REF:0000107 GO_REF:0000118 NCBI chrNW_004936473:26,556,636...26,600,830
Ensembl chrNW_004936473:26,556,611...26,603,736
JBrowse link
G Msh2 mutS homolog 2 involved_in
acts_upstream_of_or_within
NOT|acts_upstream_of_or_within
IEA
ISO
(PMID:14568978)
(PMID:15494304)
(PMID:9607915)
(PMID:9607916)
(PMID:9697842), (PMID:9697843)
Ensembl
MGI
PMID:9607915 PMID:9607916 PMID:9697842 PMID:9697843 PMID:14568978 More... GO_REF:0000107 NCBI chrNW_004936508:4,943,987...5,013,356
Ensembl chrNW_004936508:4,944,007...5,013,356
JBrowse link
G Msh3 mutS homolog 3 NOT|acts_upstream_of_or_within ISO (PMID:10662804) MGI PMID:10662804 NCBI chrNW_004936469:82,967...275,772
Ensembl chrNW_004936469:83,285...273,561
JBrowse link
G Msh6 mutS homolog 6 involved_in
acts_upstream_of_or_within
IEA
ISO
(PMID:10662804), (PMID:15238604), (PMID:17015724)
(PMID:16618598)
Ensembl
MGI
PMID:10662804 PMID:15238604 PMID:16618598 PMID:17015724 GO_REF:0000107 NCBI chrNW_004936508:4,708,661...4,728,671
Ensembl chrNW_004936508:4,708,661...4,728,787
JBrowse link
G Nuggc nuclear GTPase, germinal center associated acts_upstream_of_or_within ISO (PMID:22833677) MGI PMID:22833677 NCBI chrNW_004936675:885,015...931,657
Ensembl chrNW_004936675:885,039...920,253
JBrowse link
G Pms2 PMS1 homolog 2, mismatch repair system component acts_upstream_of_or_within
involved_in
ISO
IEA
(PMID:10429667) MGI
TreeGrafter
PMID:10429667 GO_REF:0000118 NCBI chrNW_004936750:439,396...468,747 JBrowse link
G Polb DNA polymerase beta involved_in
acts_upstream_of_or_within
IEA
ISO
(PMID:24388753) Ensembl
MGI
PMID:24388753 GO_REF:0000107 NCBI chrNW_004936785:324,655...350,496
Ensembl chrNW_004936785:323,941...350,539
JBrowse link
G Polm DNA polymerase mu acts_upstream_of_or_within ISO (PMID:15789338) MGI PMID:15789338 NCBI chrNW_004936478:19,032,995...19,042,400
Ensembl chrNW_004936478:19,032,920...19,042,432
JBrowse link
G Polq DNA polymerase theta involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936536:7,904,166...8,004,305
Ensembl chrNW_004936536:7,904,981...8,004,199
JBrowse link
G Samhd1 SAM and HD domain containing deoxynucleoside triphosphate triphosphohydrolase 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936561:4,180,607...4,238,623
Ensembl chrNW_004936561:4,180,546...4,229,036
JBrowse link
G Ung uracil DNA glycosylase involved_in
acts_upstream_of_or_within
IEA
ISO
(PMID:17015724)
(PMID:15494304)
Ensembl
MGI
PMID:15494304 PMID:17015724 GO_REF:0000107 NCBI chrNW_004936769:911,296...922,770
Ensembl chrNW_004936769:910,838...922,726
JBrowse link
somatic recombination of immunoglobulin gene segments term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Mlh1 mutL homolog 1 involved_in
acts_upstream_of_or_within
IEA
ISO
(PMID:11828012) Ensembl
MGI
PMID:11828012 GO_REF:0000107 NCBI chrNW_004936473:26,556,636...26,600,830
Ensembl chrNW_004936473:26,556,611...26,603,736
JBrowse link
G Msh2 mutS homolog 2 involved_in
acts_upstream_of_or_within
IEA
ISO
(PMID:11828012)
(PMID:14563316), (PMID:15955838)
(PMID:15494304)
(PMID:14568978)
Ensembl
MGI
PMID:11828012 PMID:14563316 PMID:14568978 PMID:15494304 PMID:15955838 GO_REF:0000107 NCBI chrNW_004936508:4,943,987...5,013,356
Ensembl chrNW_004936508:4,944,007...5,013,356
JBrowse link
G Msh3 mutS homolog 3 acts_upstream_of_or_within
involved_in
ISO
IEA
(PMID:15238604) MGI
TreeGrafter
PMID:15238604 GO_REF:0000118 NCBI chrNW_004936469:82,967...275,772
Ensembl chrNW_004936469:83,285...273,561
JBrowse link
G Msh6 mutS homolog 6 involved_in
acts_upstream_of_or_within
IEA
ISO
(PMID:15238604) Ensembl
MGI
PMID:15238604 GO_REF:0000107 NCBI chrNW_004936508:4,708,661...4,728,671
Ensembl chrNW_004936508:4,708,661...4,728,787
JBrowse link
G Pms2 PMS1 homolog 2, mismatch repair system component acts_upstream_of_or_within ISO (PMID:11828012) MGI PMID:11828012 NCBI chrNW_004936750:439,396...468,747 JBrowse link
G Ung uracil DNA glycosylase involved_in
acts_upstream_of_or_within
IEA
ISO
(PMID:15494304) Ensembl
MGI
PMID:15494304 GO_REF:0000107 NCBI chrNW_004936769:911,296...922,770
Ensembl chrNW_004936769:910,838...922,726
JBrowse link
somatic recombination of immunoglobulin genes involved in immune response term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Mlh1 mutL homolog 1 involved_in
acts_upstream_of_or_within
IEA
ISO
(PMID:12743174) Ensembl
MGI
PMID:12743174 GO_REF:0000107 NCBI chrNW_004936473:26,556,636...26,600,830
Ensembl chrNW_004936473:26,556,611...26,603,736
JBrowse link
G Msh2 mutS homolog 2 involved_in
acts_upstream_of_or_within
IEA
ISO
(PMID:12743174) Ensembl
TreeGrafter
MGI
PMID:12743174 GO_REF:0000107 GO_REF:0000118 NCBI chrNW_004936508:4,943,987...5,013,356
Ensembl chrNW_004936508:4,944,007...5,013,356
JBrowse link

Term paths to the root
Path 1
Term Annotations click to browse term
  biological_process 17411
    immune system process 2308
      production of molecular mediator of immune response 231
        antimicrobial peptide production + 12
        cytokine production involved in immune response + 122
        granulysin production 0
        granzyme A production + 1
        granzyme B production + 3
        immunoglobulin production + 112
        negative regulation of production of molecular mediator of immune response + 42
        perforin production 0
        positive regulation of production of molecular mediator of immune response + 142
        regulation of production of molecular mediator of immune response + 197
Path 2
Term Annotations click to browse term
  biological_process 17411
    cellular process 17014
      metabolic process 11311
        biosynthetic process 8301
          macromolecule biosynthetic process 7402
            gene expression 7000
              production of molecular mediator of immune response 231
                antimicrobial peptide production + 12
                cytokine production involved in immune response + 122
                granulysin production 0
                granzyme A production + 1
                granzyme B production + 3
                immunoglobulin production + 112
                negative regulation of production of molecular mediator of immune response + 42
                perforin production 0
                positive regulation of production of molecular mediator of immune response + 142
                regulation of production of molecular mediator of immune response + 197
paths to the root