ONTOLOGY REPORT - ANNOTATIONS
Term: production of molecular mediator of immune response
Accession: GO:0002440
browse the term
Definition: The synthesis or release of any molecular mediator of the immune response, resulting in an increase in its intracellular or extracellular levels.
Comment: Note that this term is in the subset of terms that should not be used for direct gene product annotation. Instead, select one of the 'regulation' children terms.
Synonyms: related_synonym: production of cellular mediator of immune response
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Lgals4
galectin 4
acts_upstream_of_or_within
ISO
(PMID:27427436)
RGD
PMID:27427436
NCBI chr 1:93,248,463...93,260,002
Ensembl chr 1:84,124,764...84,132,481
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Mmp7
matrix metallopeptidase 7
acts_upstream_of_or_within
ISO
(PMID:20056603)
RGD
PMID:20056603
NCBI chr 8:13,133,043...13,140,761
Ensembl chr 8:4,848,186...4,855,902
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Mmp7
matrix metallopeptidase 7
acts_upstream_of_or_within
ISO
(PMID:11248802)
RGD
PMID:11248802
NCBI chr 8:13,133,043...13,140,761
Ensembl chr 8:4,848,186...4,855,902
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Btk
Bruton tyrosine kinase
acts_upstream_of_or_within
ISO
MGI:1856317 (PMID:7680896)
RGD
PMID:7680896
NCBI chr X:102,016,070...102,055,448
Ensembl chr X:97,722,802...97,761,853
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Traf3ip2
Traf3 interacting protein 2
involved_in
ISO
MGI:3510784 (PMID:20543113)
RGD
PMID:20543113
NCBI chr20:44,565,992...44,609,240
Ensembl chr20:43,011,450...43,054,667
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Elane
elastase, neutrophil expressed
involved_in
IEA
GO_REF:0000107
Ensembl
GO_REF:0000107
NCBI chr 7:10,467,877...10,469,725
Ensembl chr 7:9,817,252...9,819,100
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Nod2
nucleotide-binding oligomerization domain containing 2
acts_upstream_of
ISO
MGI:3529594 (PMID:15692051)
RGD
PMID:15692051
NCBI chr19:34,555,832...34,596,281
Ensembl chr19:18,382,439...18,417,177
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Polb
DNA polymerase beta
acts_upstream_of_or_within
ISO
MGI:5427084 (PMID:24388753)
RGD
PMID:24388753
NCBI chr16:76,081,903...76,105,174
Ensembl chr16:69,379,400...69,404,812
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Yy1
YY1 transcription factor
involved_in
ISO
MGI:3624790 (PMID:23531880)
RGD
PMID:23531880
NCBI chr 6:133,471,615...133,500,875
Ensembl chr 6:127,707,596...127,732,747
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Prkdc
protein kinase, DNA-activated, catalytic subunit
IMP
RGD
PMID:22981234
RGD:8696027
NCBI chr11:98,544,952...98,762,499
Ensembl chr11:85,040,792...85,257,952
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Cyren
cell cycle regulator of NHEJ
involved_in
ISS ISO IEA
GO_REF:0000024 (PMID:30017584), (PMID:31795137) GO_REF:0000107
UniProt RGD Ensembl
PMID:30017584 PMID:31795137
GO_REF:0000024 GO_REF:0000107
NCBI chr 4:63,547,311...63,553,394
Ensembl chr 4:63,547,335...63,551,602
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Foxp1
forkhead box P1
acts_upstream_of_or_within
ISO
MGI:3711150 (PMID:16819554)
RGD
PMID:16819554
NCBI chr 4:133,117,346...133,808,647
Ensembl chr 4:131,564,756...132,112,258
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Lig4
DNA ligase 4
involved_in acts_upstream_of_or_within
IBA ISO
GO_REF:0000033 MGI:1857732 (PMID:9823897)
GO_Central RGD
PMID:9823897
GO_REF:0000033
NCBI chr16:86,220,345...86,228,930
Ensembl chr16:79,518,312...79,527,040
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Nhej1
nonhomologous end-joining factor 1
involved_in
ISO IEA ISS
(PMID:20558749) GO_REF:0000107 GO_REF:0000024
RGD Ensembl UniProt
PMID:20558749
GO_REF:0000024 GO_REF:0000107
NCBI chr 9:83,974,995...84,071,161
Ensembl chr 9:76,526,324...76,622,444
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Prkdc
protein kinase, DNA-activated, catalytic subunit
involved_in acts_upstream_of_or_within
IBA ISO
GO_REF:0000033 MGI:2383951 (PMID:9768755)
GO_Central RGD
PMID:9768755
GO_REF:0000033
NCBI chr11:98,544,952...98,762,499
Ensembl chr11:85,040,792...85,257,952
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Tcf3
transcription factor 3
acts_upstream_of_or_within involved_in
ISO IBA IEA
(PMID:16428437) MGI:2178112 (PMID:16428437) GO_REF:0000033 GO_REF:0000107
RGD GO_Central Ensembl
PMID:16428437
GO_REF:0000033 GO_REF:0000107
NCBI chr 7:9,931,251...9,952,994
Ensembl chr 7:9,280,571...9,302,314
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Xrcc4
X-ray repair cross complementing 4
involved_in acts_upstream_of_or_within
IBA ISO
GO_REF:0000033 MGI:1926771 (PMID:9875844)
GO_Central RGD
PMID:9875844
GO_REF:0000033
NCBI chr 2:22,686,506...22,932,929
Ensembl chr 2:20,951,200...21,197,808
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Aicda
activation-induced cytidine deaminase
acts_upstream_of_or_within involved_in
ISO
(PMID:17713479) (PMID:21518874)
RGD
PMID:17713479 PMID:21518874
NCBI chr 4:157,446,120...157,455,958
Ensembl chr 4:155,774,132...155,783,972
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Atad5
ATPase family, AAA domain containing 5
acts_upstream_of
ISO
MGI:4127920 (PMID:25404367)
RGD
PMID:25404367
NCBI chr10:65,568,569...65,616,379
Ensembl chr10:65,070,689...65,117,845
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Batf
basic leucine zipper ATF-like transcription factor
involved_in
ISS ISO
GO_REF:0000024 (PMID:20421391), (PMID:21572431)
UniProt RGD
PMID:20421391 PMID:21572431
GO_REF:0000024
NCBI chr 6:111,084,717...111,107,052
Ensembl chr 6:105,353,715...105,376,051
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Cd40lg
CD40 ligand
involved_in
IEA ISO
GO_REF:0000107 (PMID:7529792)
Ensembl RGD
PMID:7529792
GO_REF:0000107
NCBI chr X:140,164,341...140,176,057
Ensembl chr X:135,126,969...135,138,306
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Ercc1
ERCC excision repair 1, endonuclease non-catalytic subunit
acts_upstream_of_or_within
ISO
MGI:2183944 (PMID:15280420)
RGD
PMID:15280420
NCBI chr 1:88,099,308...88,135,966
Ensembl chr 1:78,996,390...79,007,963
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Exo1
exonuclease 1
acts_upstream_of_or_within
ISO
MGI:2653925 (PMID:14716311)
RGD
PMID:14716311
NCBI chr13:90,341,947...90,366,861
Ensembl chr13:87,809,810...87,834,654
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Exosc3
exosome component 3
involved_in
ISO
(PMID:21255825)
RGD
PMID:21255825
NCBI chr 5:64,369,495...64,374,711
Ensembl chr 5:59,573,886...59,579,060
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Exosc6
exosome component 6
involved_in
ISO
(PMID:21255825)
RGD
PMID:21255825
NCBI chr19:55,931,523...55,932,937
Ensembl chr19:39,022,183...39,023,515
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Lig4
DNA ligase 4
acts_upstream_of_or_within
ISO
MGI:1857732 (PMID:17713479)
RGD
PMID:17713479
NCBI chr16:86,220,345...86,228,930
Ensembl chr16:79,518,312...79,527,040
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Mlh1
mutL homolog 1
involved_in acts_upstream_of_or_within
IEA ISO
GO_REF:0000107 MGI:1857946 (PMID:12743174)
Ensembl RGD
PMID:12743174
GO_REF:0000107
NCBI chr 8:120,074,871...120,112,109
Ensembl chr 8:111,196,468...111,233,617
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Msh2
mutS homolog 2
involved_in acts_upstream_of_or_within
IEA ISO
GO_REF:0000107 MGI:1857940|MGI:2151801 (PMID:10430621), (PMID:12743174)
Ensembl RGD
PMID:10430621 PMID:12743174
GO_REF:0000107
NCBI chr 6:12,567,368...12,626,534
Ensembl chr 6:6,813,795...6,872,938
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Msh6
mutS homolog 6
acts_upstream_of_or_within
ISO
MGI:109352|MGI:3653701 (PMID:16618598), (PMID:17015724)
RGD
PMID:16618598 PMID:17015724
NCBI chr 6:12,316,190...12,333,505
Ensembl chr 6:6,562,632...6,579,956
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Nbn
nibrin
involved_in
ISS ISO IEA
GO_REF:0000024 (PMID:15668383) GO_REF:0000107
UniProt RGD Ensembl
PMID:15668383
GO_REF:0000024 GO_REF:0000107
NCBI chr 5:34,256,678...34,291,163
Ensembl chr 5:29,459,457...29,494,150
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Nfkbiz
NFKB inhibitor zeta
involved_in
ISO
MGI:3046930|MGI:5501251 (PMID:25124037), (PMID:31182790)
RGD
PMID:25124037 PMID:31182790
NCBI chr11:58,251,720...58,279,767
Ensembl chr11:44,782,676...44,810,723
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Pcyt1a
phosphate cytidylyltransferase 1A, choline
involved_in
ISS ISO
GO_REF:0000024 (PMID:19139091)
UniProt RGD
PMID:19139091
GO_REF:0000024
NCBI chr11:68,313,860...68,357,828
Ensembl chr11:68,313,882...68,357,357
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Rnf168
ring finger protein 168
involved_in
ISS ISO
GO_REF:0000024 (PMID:20080757)
UniProt RGD
PMID:20080757
GO_REF:0000024
NCBI chr11:68,486,313...68,508,296
Ensembl chr11:68,486,321...68,508,277
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Rnf8
ring finger protein 8
involved_in
ISS ISO
GO_REF:0000024 (PMID:20080757)
UniProt RGD
PMID:20080757
GO_REF:0000024
NCBI chr20:7,683,890...7,708,437
Ensembl chr20:7,682,322...7,708,491
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Sanbr
SANT and BTB domain regulator of CSR
involved_in
ISS IBA ISO IEA
GO_REF:0000024 GO_REF:0000033 (PMID:33831416) GO_REF:0000107
UniProt GO_Central RGD Ensembl
PMID:33831416
GO_REF:0000024 GO_REF:0000033 GO_REF:0000107
NCBI chr14:97,516,652...97,585,955
Ensembl chr14:97,516,413...97,581,346
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Swap70
switching B-cell complex subunit SWAP70
acts_upstream_of_or_within
ISO
(PMID:9642267)
RGD
PMID:9642267
NCBI chr 1:173,702,338...173,763,540
Ensembl chr 1:164,267,609...164,328,794
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Ung
uracil-DNA glycosylase
acts_upstream_of_or_within
ISO
MGI:1343961 (PMID:17015724)
RGD
PMID:17015724
NCBI chr12:48,145,838...48,154,789
Ensembl chr12:42,485,276...42,494,206
G
Xrcc4
X-ray repair cross complementing 4
acts_upstream_of_or_within
ISO
MGI:1926771|MGI:3047571|MGI:3641440 (PMID:17713479)
RGD
PMID:17713479
NCBI chr 2:22,686,506...22,932,929
Ensembl chr 2:20,951,200...21,197,808
G
Ccr6
C-C motif chemokine receptor 6
involved_in
ISO
(PMID:27174992)
RGD
PMID:27174992
NCBI chr 1:55,022,037...55,055,857
Ensembl chr 1:52,474,168...52,498,603
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Fdcsp
follicular dendritic cell secreted protein
acts_upstream_of_positive_effect
ISO
MGI:7719862 (PMID:17548624)
RGD
PMID:17548624
NCBI chr14:20,169,691...20,173,983
Ensembl chr14:20,169,691...20,173,983
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Bcl6
BCL6, transcription repressor
acts_upstream_of
ISO
MGI:103034|MGI:2158438 (PMID:10490661)
RGD
PMID:10490661
NCBI chr11:76,854,090...76,877,389
Ensembl chr11:76,854,090...76,877,389
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Fdcsp
follicular dendritic cell secreted protein
acts_upstream_of_or_within_negative_effect
ISO
MGI:7719862 (PMID:17548624)
RGD
PMID:17548624
NCBI chr14:20,169,691...20,173,983
Ensembl chr14:20,169,691...20,173,983
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Foxp3
forkhead box P3
acts_upstream_of
ISO
MGI:3696705 (PMID:16275384)
RGD
PMID:16275384
NCBI chr X:17,580,380...17,601,181
Ensembl chr X:14,908,494...14,923,838
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Il4
interleukin 4
acts_upstream_of
ISO
(PMID:14988498)
RGD
PMID:14988498
NCBI chr10:38,272,003...38,277,549
Ensembl chr10:37,771,203...37,776,750
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Stat6
signal transducer and activator of transcription 6
acts_upstream_of
ISO
MGI:107187 (PMID:10490661)
RGD
PMID:10490661
NCBI chr 7:65,365,505...65,382,825
Ensembl chr 7:63,479,642...63,498,495
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Fdcsp
follicular dendritic cell secreted protein
acts_upstream_of_or_within_negative_effect
ISO
MGI:7719862 (PMID:17548624)
RGD
PMID:17548624
NCBI chr14:20,169,691...20,173,983
Ensembl chr14:20,169,691...20,173,983
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Hspd1
heat shock protein family D (Hsp60) member 1
involved_in
ISO
(PMID:16148103)
RGD
PMID:16148103
NCBI chr 9:64,073,610...64,084,332
Ensembl chr 9:56,579,201...56,589,662
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Il4
interleukin 4
acts_upstream_of
ISO
(PMID:14988498)
RGD
PMID:14988498
NCBI chr10:38,272,003...38,277,549
Ensembl chr10:37,771,203...37,776,750
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Spink5
serine peptidase inhibitor, Kazal type 5
involved_in
IEA
GO_REF:0000107
Ensembl
GO_REF:0000107
NCBI chr18:36,515,347...36,584,038
Ensembl chr18:36,264,452...36,332,185
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Angpt1
angiopoietin 1
involved_in acts_upstream_of_or_within
IEA ISO
GO_REF:0000107 (PMID:20060382)
Ensembl RGD
PMID:20060382
GO_REF:0000107
NCBI chr 7:75,415,959...75,668,696
Ensembl chr 7:73,531,486...73,784,067
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Apoa1
apolipoprotein A1
involved_in
ISO IEA
(PMID:12458630) GO_REF:0000107
RGD Ensembl
PMID:12458630
GO_REF:0000107
NCBI chr 8:55,423,945...55,425,729
Ensembl chr 8:46,527,144...46,529,035
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Apoa2
apolipoprotein A2
involved_in
ISO
(PMID:12458630)
RGD
PMID:12458630
NCBI chr13:86,176,767...86,178,819
Ensembl chr13:83,644,470...83,646,355
G
Il10
interleukin 10
involved_in
ISS ISO
GO_REF:0000024 (PMID:10443688)
UniProt RGD
PMID:10443688
GO_REF:0000024
NCBI chr13:45,024,921...45,029,586
Ensembl chr13:42,472,839...42,477,313
G
Tnf
tumor necrosis factor
involved_in
ISO
(PMID:10443688)
RGD
PMID:10443688
NCBI chr20:3,626,685...3,629,303
Ensembl chr20:3,622,011...3,624,629
G
Jak3
Janus kinase 3
involved_in
ISS ISO
GO_REF:0000024 (PMID:16020505)
BHF-UCL RGD
PMID:16020505
GO_REF:0000024
NCBI chr16:18,418,807...18,432,515
Ensembl chr16:18,386,405...18,398,536
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Cd22
CD22 molecule
involved_in
ISO
UniProtKB:Q80ZE3 (PMID:20200274)
RGD
PMID:20200274
NCBI chr 1:95,243,785...95,270,430
Ensembl chr 1:86,117,459...86,132,322
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Fcgr2b
Fc gamma receptor 2B
acts_upstream_of_or_within
ISO
MGI:1857166 (PMID:12385742)
RGD
PMID:12385742
NCBI chr13:85,725,897...85,740,517
Ensembl chr13:83,193,163...83,207,778
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Ifnb1
interferon beta 1
IDA
RGD
PMID:10494101
RGD:401854240
NCBI chr 5:108,066,650...108,067,487
Ensembl chr 5:103,020,969...103,021,523
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Il13ra2
interleukin 13 receptor subunit alpha 2
involved_in acts_upstream_of_or_within
IEA ISO
GO_REF:0000107 MGI:2653910 (PMID:15944273)
Ensembl RGD
PMID:15944273
GO_REF:0000107
NCBI chr X:115,814,620...115,886,080
Ensembl chr X:111,002,592...111,072,381
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Il33
interleukin 33
involved_in
IEA ISO
GO_REF:0000107 UniProtKB:P08226 (PMID:18268038)
Ensembl RGD
PMID:18268038
GO_REF:0000107
NCBI chr 1:237,115,478...237,149,897
Ensembl chr 1:227,721,435...227,736,373
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Prkdc
protein kinase, DNA-activated, catalytic subunit
IMP
RGD
PMID:22981234
RGD:8696027
NCBI chr11:98,544,952...98,762,499
Ensembl chr11:85,040,792...85,257,952
G
Siglec10
sialic acid binding Ig-like lectin 10
involved_in
IEA
GO_REF:0000107
Ensembl
GO_REF:0000107
NCBI chr 1:93,817,301...93,826,376
Ensembl chr 1:93,817,335...93,825,931
G
Tmbim6
transmembrane BAX inhibitor motif containing 6
involved_in
ISO
(PMID:19328063)
RGD
PMID:19328063
NCBI chr 7:132,405,217...132,422,492
Ensembl chr 7:130,527,316...130,543,633
G
Zpbp2
zona pellucida binding protein 2
acts_upstream_of_or_within
ISO
MGI:3762590 (PMID:29536159)
RGD
PMID:29536159
NCBI chr10:83,558,772...83,567,511
Ensembl chr10:83,559,016...83,567,508
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Parp3
poly (ADP-ribose) polymerase family, member 3
involved_in
ISO
(PMID:26000965)
RGD
PMID:26000965
NCBI chr 8:115,989,721...115,995,822
Ensembl chr 8:107,111,012...107,116,782
G
Fdcsp
follicular dendritic cell secreted protein
involved_in
ISO
MGI:6723808|MGI:7719862 (PMID:24399151)
RGD
PMID:24399151
NCBI chr14:20,169,691...20,173,983
Ensembl chr14:20,169,691...20,173,983
G
Bcl6
BCL6, transcription repressor
acts_upstream_of_or_within
ISO
MGI:103034|MGI:2158438 (PMID:10490661)
RGD
PMID:10490661
NCBI chr11:76,854,090...76,877,389
Ensembl chr11:76,854,090...76,877,389
G
Foxp3
forkhead box P3
acts_upstream_of_or_within
ISO
MGI:3696705 (PMID:16275384)
RGD
PMID:16275384
NCBI chr X:17,580,380...17,601,181
Ensembl chr X:14,908,494...14,923,838
G
Ndfip1
Nedd4 family interacting protein 1
involved_in acts_upstream_of_or_within
IEA ISO
GO_REF:0000107 MGI:3695433 (PMID:17137798)
Ensembl RGD
PMID:17137798
GO_REF:0000107
NCBI chr18:30,265,808...30,316,068
Ensembl chr18:30,250,613...30,322,311
G
Acp5
acid phosphatase 5, tartrate resistant
involved_in acts_upstream_of_or_within
IEA ISO
GO_REF:0000107 MGI:2180086 (PMID:11168643)
Ensembl RGD
PMID:11168643
GO_REF:0000107
NCBI chr 8:28,939,984...28,946,639
Ensembl chr 8:20,663,985...20,667,929
G
Atg9a
autophagy related 9A
acts_upstream_of_or_within
ISO
(PMID:24670807)
RGD
PMID:24670807
NCBI chr 9:84,126,071...84,136,723
Ensembl chr 9:76,677,404...76,687,986
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Axl
Axl receptor tyrosine kinase
acts_upstream_of_or_within
ISO
MGI:107670 (PMID:16831897)
RGD
PMID:16831897
NCBI chr 1:90,392,864...90,424,123
Ensembl chr 1:81,265,088...81,296,265
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Cuedc2
CUE domain containing 2
acts_upstream_of_or_within involved_in
ISO IEA
(PMID:24882011) MGI:5635142 (PMID:24882011) GO_REF:0000107
RGD Ensembl
PMID:24882011
GO_REF:0000107
NCBI chr 1:245,192,057...245,200,594
Ensembl chr 1:245,192,063...245,200,339
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Epx
eosinophil peroxidase
acts_upstream_of_or_within
ISO
MGI:2182952 (PMID:16926417)
RGD
PMID:16926417
NCBI chr10:73,164,096...73,175,180
Ensembl chr10:72,666,865...72,677,952
G
Irak3
interleukin-1 receptor-associated kinase 3
involved_in
ISO
(PMID:12150927)
RGD
PMID:12150927
NCBI chr 7:57,538,522...57,600,166
Ensembl chr 7:55,653,962...55,713,121
G
Nlrx1
NLR family member X1
involved_in acts_upstream_of_or_within
IEA ISO
GO_REF:0000107 MGI:5141085 (PMID:21703540)
Ensembl RGD
PMID:21703540
GO_REF:0000107
NCBI chr 8:53,486,866...53,503,498
Ensembl chr 8:44,590,048...44,606,484
G
Nod2
nucleotide-binding oligomerization domain containing 2
acts_upstream_of_or_within
ISO
MGI:2680581 (PMID:15220916)
RGD
PMID:15220916
NCBI chr19:34,555,832...34,596,281
Ensembl chr19:18,382,439...18,417,177
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Prg2
proteoglycan 2, pro eosinophil major basic protein
involved_in acts_upstream_of_or_within
IEA ISO
GO_REF:0000107 MGI:3027719 (PMID:16926417)
Ensembl RGD
PMID:16926417
GO_REF:0000107
NCBI chr 3:90,469,192...90,472,759
Ensembl chr 3:70,062,535...70,066,101
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Tgfb1
transforming growth factor, beta 1
involved_in
ISO ISS
(PMID:20875417) GO_REF:0000024
RGD AgBase
PMID:20875417
GO_REF:0000024
NCBI chr 1:90,324,312...90,340,627
Ensembl chr 1:81,196,532...81,212,847
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Tgfb2
transforming growth factor, beta 2
involved_in
ISS ISO
GO_REF:0000024 (PMID:20875417)
AgBase RGD
PMID:20875417
GO_REF:0000024
NCBI chr13:100,691,540...100,793,227
Ensembl chr13:98,160,087...98,261,405
G
Tgfb3
transforming growth factor, beta 3
involved_in
ISO ISS
(PMID:20875417) GO_REF:0000024
RGD AgBase
PMID:20875417
GO_REF:0000024
NCBI chr 6:111,435,170...111,457,646
Ensembl chr 6:105,704,236...105,726,564
G
Twist1
twist family bHLH transcription factor 1
acts_upstream_of_or_within
ISO
MGI:104685 (PMID:16831897)
RGD
PMID:16831897
NCBI chr 6:56,402,309...56,404,303
Ensembl chr 6:50,674,678...50,677,653
G
Twist2
twist family bHLH transcription factor 2
acts_upstream_of_or_within
ISO
MGI:3044412|MGI:98872 (PMID:16831897)
RGD
PMID:16831897
NCBI chr 9:92,374,740...92,419,222
Ensembl chr 9:92,374,574...92,419,222
G
Bcl6
BCL6, transcription repressor
acts_upstream_of_or_within
ISO
MGI:2158436 (PMID:15950739)
RGD
PMID:15950739
NCBI chr11:76,854,090...76,877,389
Ensembl chr11:76,854,090...76,877,389
G
Hmox1
heme oxygenase 1
IDA
RGD
PMID:17234154
RGD:1601626
NCBI chr19:13,452,365...13,479,823
Ensembl chr19:13,467,244...13,474,079
G
Rabgef1
RAB guanine nucleotide exchange factor 1
acts_upstream_of_or_within
ISO
MGI:3051384 (PMID:16533754)
RGD
PMID:16533754
NCBI chr12:26,459,190...26,503,790
Ensembl chr12:26,460,175...26,503,744
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Cd96
CD96 molecule
acts_upstream_of_or_within
ISO
MGI:5617136 (PMID:24658051)
RGD
PMID:24658051
NCBI chr11:68,164,926...68,239,266
Ensembl chr11:54,702,290...54,776,621
G
RT1-CE5
RT1 class I, locus CE5
involved_in
ISO
(PMID:24018270)
RGD
PMID:24018270
NCBI chr20:3,407,880...3,484,130
G
Bst2
bone marrow stromal cell antigen 2
involved_in
ISS ISO
GO_REF:0000024 (PMID:19564354)
UniProt RGD
PMID:19564354
GO_REF:0000024
NCBI chr16:18,250,593...18,254,967
Ensembl chr16:18,217,407...18,220,979
G
Foxp3
forkhead box P3
involved_in
ISO
(PMID:15466453), (PMID:23169781)
RGD
PMID:15466453 PMID:23169781
NCBI chr X:17,580,380...17,601,181
Ensembl chr X:14,908,494...14,923,838
G
Hfe
homeostatic iron regulator
involved_in
ISO
UniProtKB:P04439 (PMID:24643698)
RGD
PMID:24643698
NCBI chr17:41,841,302...41,849,359
Ensembl chr17:41,413,451...41,421,502
G
Lilrb4
leukocyte immunoglobulin like receptor B4
involved_in
ISO
(PMID:18420485)
RGD
PMID:18420485
NCBI chr 1:78,847,685...78,853,294
Ensembl chr 1:69,805,250...69,810,660
G
RT1-CE5
RT1 class I, locus CE5
involved_in
ISO
(PMID:24018270)
RGD
PMID:24018270
NCBI chr20:3,407,880...3,484,130
G
Slamf1
signaling lymphocytic activation molecule family member 1
involved_in
ISO
(PMID:11477403)
RGD
PMID:11477403
NCBI chr13:86,802,708...86,837,890
Ensembl chr13:84,270,316...84,305,497
G
Smad7
SMAD family member 7
involved_in
IEA ISO
GO_REF:0000107 (PMID:25642768)
Ensembl RGD
PMID:25642768
GO_REF:0000107
NCBI chr18:71,263,508...71,291,849
Ensembl chr18:68,988,429...69,016,765
G
Vsir
V-set immunoregulatory receptor
acts_upstream_of_or_within
ISO
(PMID:21383057)
RGD
PMID:21383057
NCBI chr20:28,824,493...28,850,175
Ensembl chr20:28,281,596...28,303,878
G
Xcl1
X-C motif chemokine ligand 1
involved_in
ISO
(PMID:10887101)
RGD
PMID:10887101
NCBI chr13:79,781,784...79,785,440
Ensembl chr13:77,248,717...77,252,329
G
Arg1
arginase 1
involved_in
IEA ISO
GO_REF:0000107 (PMID:19360123)
Ensembl RGD
PMID:19360123
GO_REF:0000107
NCBI chr 1:22,295,093...22,307,720
Ensembl chr 1:20,475,968...20,488,422
G
Ifnb1
interferon beta 1
involved_in
ISO
(PMID:20554961)
RGD
PMID:20554961
NCBI chr 5:108,066,650...108,067,487
Ensembl chr 5:103,020,969...103,021,523
G
Tbx21
T-box transcription factor 21
involved_in
ISO
(PMID:10761931), (PMID:23616576)
RGD
PMID:10761931 PMID:23616576
NCBI chr10:82,578,751...82,595,253
Ensembl chr10:82,082,322...82,098,831
G
Nod2
nucleotide-binding oligomerization domain containing 2
acts_upstream_of_or_within
ISO
(PMID:18167348)
RGD
PMID:18167348
NCBI chr19:34,555,832...34,596,281
Ensembl chr19:18,382,439...18,417,177
G
Klk1c10
kallikrein 1-related peptidase C10
involved_in
ISO
(PMID:18714013)
RGD
PMID:18714013
NCBI chr 1:103,539,527...103,543,586
Ensembl chr 1:94,402,993...94,407,052
G
Klk5
kallikrein related-peptidase 5
involved_in
ISO
(PMID:17012259)
RGD
PMID:17012259
NCBI chr 1:103,432,743...103,442,011
Ensembl chr 1:94,296,168...94,304,666
G
Klk7
kallikrein-related peptidase 7
involved_in
IEA ISO
GO_REF:0000107 (PMID:17012259)
Ensembl RGD
PMID:17012259
GO_REF:0000107
NCBI chr 1:103,403,206...103,407,907
Ensembl chr 1:94,266,605...94,271,332
G
Pgc
progastricsin
involved_in
ISO
(PMID:12759353)
RGD
PMID:12759353
NCBI chr 9:20,755,002...20,763,220
Ensembl chr 9:13,257,462...13,265,682
G
Il17a
interleukin 17A
involved_in
IEA ISO
GO_REF:0000107 (PMID:19144317)
Ensembl RGD
PMID:19144317
GO_REF:0000107
NCBI chr 9:30,640,844...30,644,331
Ensembl chr 9:23,144,402...23,147,889
G
Il17f
interleukin 17F
involved_in
IEA ISO
GO_REF:0000107 (PMID:19144317)
Ensembl RGD
PMID:19144317
GO_REF:0000107
NCBI chr 9:30,686,532...30,697,918
Ensembl chr 9:23,190,100...23,201,482
G
Nod2
nucleotide-binding oligomerization domain containing 2
acts_upstream_of_or_within
ISO
MGI:3529594 (PMID:15692051)
RGD
PMID:15692051
NCBI chr19:34,555,832...34,596,281
Ensembl chr19:18,382,439...18,417,177
G
Clec7a
C-type lectin domain containing 7A
involved_in
IBA ISO
GO_REF:0000033 (PMID:27288407)
GO_Central RGD
PMID:27288407
GO_REF:0000033
NCBI chr 4:164,588,737...164,599,953
Ensembl chr 4:162,902,732...162,913,897
G
Defb43
defensin beta 43
involved_in
ISO
(PMID:26649771)
RGD
PMID:26649771
NCBI chr15:41,447,875...41,452,769
Ensembl chr15:37,272,008...37,276,626
G
F2rl1
F2R like trypsin receptor 1
involved_in
ISS ISO
GO_REF:0000024 (PMID:11441110)
UniProt RGD
PMID:11441110
GO_REF:0000024
NCBI chr 2:28,507,003...28,519,954
Ensembl chr 2:26,772,278...26,785,226
G
Ffar2
free fatty acid receptor 2
involved_in
ISS ISO
GO_REF:0000024 (PMID:23665276)
UniProt RGD
PMID:23665276
GO_REF:0000024
NCBI chr 1:95,199,277...95,202,599
Ensembl chr 1:86,072,184...86,075,033
G
Ffar3
free fatty acid receptor 3
involved_in
ISS ISO
GO_REF:0000024 (PMID:23665276)
UniProt RGD
PMID:23665276
GO_REF:0000024
NCBI chr 1:95,232,804...95,234,144
Ensembl chr 1:86,104,920...86,106,849
G
Hk1
hexokinase 1
involved_in
IEA ISO
GO_REF:0000107 (PMID:27374331)
Ensembl RGD
PMID:27374331
GO_REF:0000107
NCBI chr20:30,773,222...30,874,814
Ensembl chr20:30,230,486...30,332,131
G
Htr2a
5-hydroxytryptamine receptor 2A
IMP
RGD
PMID:19318092
RGD:401901206
NCBI chr15:56,360,647...56,428,703
Ensembl chr15:49,950,804...50,020,928
G
Inava
innate immunity activator
involved_in
ISO
(PMID:28436939)
RGD
PMID:28436939
NCBI chr13:50,218,149...50,238,430
Ensembl chr13:47,666,447...47,686,729
G
Irf5
interferon regulatory factor 5
involved_in
ISO
(PMID:29046356)
RGD
PMID:29046356
NCBI chr 4:59,092,914...59,104,596
Ensembl chr 4:58,127,640...58,139,267
G
Lacc1
laccase domain containing 1
involved_in
ISO
(PMID:28593945)
RGD
PMID:28593945
NCBI chr15:58,799,477...58,816,840
Ensembl chr15:52,395,183...52,407,545
G
Laptm5
lysosomal protein transmembrane 5
involved_in
ISO
(PMID:22733818)
RGD
PMID:22733818
NCBI chr 5:148,371,880...148,393,927
Ensembl chr 5:143,087,759...143,109,807
G
Nlrp3
NLR family, pyrin domain containing 3
involved_in
ISO
(PMID:27374331)
RGD
PMID:27374331
NCBI chr10:44,826,299...44,853,373
Ensembl chr10:44,328,566...44,352,811
G
Nod2
nucleotide-binding oligomerization domain containing 2
involved_in
ISO
(PMID:16260731)
RGD
PMID:16260731
NCBI chr19:34,555,832...34,596,281
Ensembl chr19:18,382,439...18,417,177
G
Scimp
SLP adaptor and CSK interacting membrane protein
involved_in
ISO
(PMID:27288407)
RGD
PMID:27288407
NCBI chr10:56,006,243...56,026,357
Ensembl chr10:55,507,519...55,528,171
G
Sphk2
sphingosine kinase 2
involved_in
ISO
(PMID:17346996)
RGD
PMID:17346996
NCBI chr 1:105,317,332...105,324,985
Ensembl chr 1:96,180,887...96,188,391
G
Tek
TEK receptor tyrosine kinase
acts_upstream_of_or_within
ISO
(PMID:20060382)
RGD
PMID:20060382
NCBI chr 5:114,722,815...114,849,535
Ensembl chr 5:109,607,077...109,733,804
G
Tnfrsf14
TNF receptor superfamily member 14
involved_in acts_upstream_of_or_within
IBA ISO
GO_REF:0000033 MGI:4940320 (PMID:21236258)
GO_Central RGD
PMID:21236258
GO_REF:0000033
NCBI chr 5:170,768,413...170,776,749
Ensembl chr 5:165,484,262...165,493,703
G
Trim6
tripartite motif containing 6
involved_in
ISO
(PMID:24882218)
RGD
PMID:24882218
NCBI chr 1:168,095,619...168,108,809
Ensembl chr 1:158,683,746...158,696,914
G
Wnt5a
Wnt family member 5A
involved_in
ISO
(PMID:18174455)
RGD
PMID:18174455
NCBI chr16:3,702,300...3,724,860
Ensembl chr16:3,697,032...3,718,234
G
Clec7a
C-type lectin domain containing 7A
involved_in
ISO
(PMID:19136564), (PMID:27288407)
RGD
PMID:19136564 PMID:27288407
NCBI chr 4:164,588,737...164,599,953
Ensembl chr 4:162,902,732...162,913,897
G
Kit
KIT proto-oncogene receptor tyrosine kinase
involved_in
ISO
(PMID:18454155)
RGD
PMID:18454155
NCBI chr14:32,901,615...32,978,895
Ensembl chr14:32,548,877...32,624,652
G
Nod2
nucleotide-binding oligomerization domain containing 2
IDA
RGD
PMID:16818757
RGD:1600784
NCBI chr19:34,555,832...34,596,281
Ensembl chr19:18,382,439...18,417,177
G
Plcg2
phospholipase C, gamma 2
involved_in
IEA ISO
GO_REF:0000107 (PMID:19136564)
Ensembl RGD
PMID:19136564
GO_REF:0000107
NCBI chr19:62,456,196...62,592,684
Ensembl chr19:45,547,416...45,683,930
G
Scimp
SLP adaptor and CSK interacting membrane protein
involved_in
ISO
(PMID:27288407)
RGD
PMID:27288407
NCBI chr10:56,006,243...56,026,357
Ensembl chr10:55,507,519...55,528,171
G
Xcl1
X-C motif chemokine ligand 1
involved_in
ISO
(PMID:18832695)
RGD
PMID:18832695
NCBI chr13:79,781,784...79,785,440
Ensembl chr13:77,248,717...77,252,329
G
Cd244
CD244 molecule
involved_in
ISO
(PMID:11714776)
RGD
PMID:11714776
NCBI chr13:86,583,727...86,606,902
Ensembl chr13:84,052,493...84,074,492
G
Ptpn22
protein tyrosine phosphatase, non-receptor type 22
involved_in
ISO
(PMID:23871208)
RGD
PMID:23871208
NCBI chr 2:194,055,165...194,103,209
Ensembl chr 2:191,366,808...191,414,779
G
Xcl1
X-C motif chemokine ligand 1
involved_in
ISO
(PMID:18832695)
RGD
PMID:18832695
NCBI chr13:79,781,784...79,785,440
Ensembl chr13:77,248,717...77,252,329
G
Btk
Bruton tyrosine kinase
IMP
RGD
PMID:28352114
RGD:151665126
NCBI chr X:102,016,070...102,055,448
Ensembl chr X:97,722,802...97,761,853
G
Cd37
CD37 molecule
acts_upstream_of_or_within
ISO
MGI:2386160 (PMID:10891477)
RGD
PMID:10891477
NCBI chr 1:104,855,622...104,861,111
Ensembl chr 1:95,719,190...95,724,648
G
Cd86
CD86 molecule
involved_in
ISO
(PMID:23241883)
RGD
PMID:23241883
NCBI chr11:77,647,565...77,706,178
Ensembl chr11:64,163,828...64,200,818
G
Clcf1
cardiotrophin-like cytokine factor 1
involved_in
ISO
(PMID:12023368)
RGD
PMID:12023368
NCBI chr 1:210,937,763...210,947,064
Ensembl chr 1:201,507,859...201,517,605
G
Dnajb9
DnaJ heat shock protein family (Hsp40) member B9
involved_in
ISS ISO
GO_REF:0000024 (PMID:25222125)
UniProt RGD
PMID:25222125
GO_REF:0000024
NCBI chr 6:66,997,842...67,007,371
Ensembl chr 6:61,269,913...61,275,063
G
Ephb2
Eph receptor B2
involved_in
ISO
(PMID:24803541)
RGD
PMID:24803541
NCBI chr 5:154,179,065...154,360,459
Ensembl chr 5:148,897,246...149,077,059
G
Foxp1
forkhead box P1
acts_upstream_of_or_within
ISO
MGI:3711150 (PMID:16819554)
RGD
PMID:16819554
NCBI chr 4:133,117,346...133,808,647
Ensembl chr 4:131,564,756...132,112,258
G
Galnt2
polypeptide N-acetylgalactosaminyltransferase 2
involved_in
IEA ISO
GO_REF:0000107 (PMID:12438318)
Ensembl RGD
PMID:12438318
GO_REF:0000107
NCBI chr19:69,110,657...69,222,237
Ensembl chr19:52,213,351...52,324,813
G
Gpi
glucose-6-phosphate isomerase
involved_in
ISO
(PMID:3020690)
RGD
PMID:3020690
NCBI chr 1:95,965,389...95,996,932
Ensembl chr 1:86,828,216...86,856,086
G
Hpx
hemopexin
acts_upstream_of_or_within
ISO
MGI:2447193 (PMID:18641331)
RGD
PMID:18641331
NCBI chr 1:169,344,647...169,352,155
Ensembl chr 1:159,932,755...159,940,328
G
Il10
interleukin 10
acts_upstream_of
ISO
UniProtKB:P60568 (PMID:22962438)
RGD
PMID:22962438
NCBI chr13:45,024,921...45,029,586
Ensembl chr13:42,472,839...42,477,313
G
Il13
interleukin 13
involved_in acts_upstream_of_or_within
IDA IBA ISO
IgE production after infection GO_REF:0000033 MGI:1931804|MGI:96556 (PMID:15944273)
GO_Central RGD
PMID:15944273 PMID:11573960
GO_REF:0000033, RGD:633067
NCBI chr10:38,290,926...38,293,483
Ensembl chr10:37,790,130...37,792,737
G
Il13ra1
interleukin 13 receptor subunit alpha 1
involved_in
IDA IBA
IgE production after infection GO_REF:0000033
GO_Central RGD
PMID:11573960
GO_REF:0000033, RGD:633067
NCBI chr X:120,213,670...120,294,777
Ensembl chr X:115,348,860...115,408,681 Ensembl chr11:115,348,860...115,408,681
G
Il13ra1-ps1
interleukin 13 receptor subunit alpha 1, pseudogene 1
involved_in
IBA
GO_REF:0000033
GO_Central
GO_REF:0000033
NCBI chr11:71,255,035...71,258,723
Ensembl chr11:71,254,928...71,258,678
G
Il2
interleukin 2
acts_upstream_of acts_upstream_of_or_within
ISO
UniProtKB:P22301 (PMID:22962438) MGI:1857191 (PMID:1830926)
RGD
PMID:1830926 PMID:22962438
NCBI chr 2:121,932,968...121,937,672
Ensembl chr 2:120,004,862...120,009,566
G
Il21
interleukin 21
involved_in
ISS ISO
GO_REF:0000024 (PMID:23045607)
UniProt RGD
PMID:23045607
GO_REF:0000024
NCBI chr 2:122,045,240...122,055,142
Ensembl chr 2:120,119,444...120,126,996
G
Il33
interleukin 33
involved_in
IEA ISO
GO_REF:0000107 UniProtKB:P08226 (PMID:18268038)
Ensembl RGD
PMID:18268038
GO_REF:0000107
NCBI chr 1:237,115,478...237,149,897
Ensembl chr 1:227,721,435...227,736,373
G
Il4
interleukin 4
acts_upstream_of_or_within
ISO
MGI:1857195|MGI:96541 (PMID:15944273)
RGD
PMID:15944273
NCBI chr10:38,272,003...38,277,549
Ensembl chr10:37,771,203...37,776,750
G
Il4r
interleukin 4 receptor
acts_upstream_of_or_within
ISO
MGI:1861951 (PMID:15944273)
RGD
PMID:15944273
NCBI chr 1:189,545,739...189,570,639
Ensembl chr 1:180,115,120...180,139,980
G
Il5
interleukin 5
involved_in
ISO
UniProtKB:Q8BVZ5 (PMID:18268038)
RGD
PMID:18268038
NCBI chr10:38,375,132...38,378,003
Ensembl chr10:37,874,342...37,877,213
G
Il6
interleukin 6
involved_in
ISS ISO
GO_REF:0000024 (PMID:23045607) (PMID:3491322)
UniProt RGD
PMID:3491322 PMID:23045607
GO_REF:0000024
NCBI chr 4:5,889,999...5,894,575
Ensembl chr 4:5,213,394...5,219,178
G
Mzb1
marginal zone B and B1 cell-specific protein
involved_in
ISS ISO
GO_REF:0000024 (PMID:19805154), (PMID:19805157)
UniProt RGD
PMID:19805154 PMID:19805157
GO_REF:0000024
NCBI chr18:27,513,087...27,515,148
Ensembl chr18:27,239,001...27,241,094
G
Phb1
prohibitin 1
involved_in
ISS ISO
GO_REF:0000024 (PMID:23241883)
UniProt RGD
PMID:23241883
GO_REF:0000024
NCBI chr10:81,102,043...81,114,815
Ensembl chr10:80,605,251...80,618,042
G
Phb2
prohibitin 2
involved_in
ISS ISO IEA
GO_REF:0000024 (PMID:23241883) GO_REF:0000107
UniProt RGD Ensembl
PMID:23241883
GO_REF:0000024 GO_REF:0000107
NCBI chr 4:159,203,948...159,208,561
Ensembl chr 4:157,517,577...157,522,272
G
Ptprc
protein tyrosine phosphatase, receptor type, C
involved_in
ISO
(PMID:1793833)
RGD
PMID:1793833
NCBI chr13:52,147,717...52,259,810
Ensembl chr13:49,596,193...49,708,692
G
Rbp4
retinol binding protein 4
involved_in
ISO
(PMID:10944490)
RGD
PMID:10944490
NCBI chr 1:245,306,349...245,313,551
Ensembl chr 1:235,893,917...235,901,399
G
RT1-A2
RT1 class Ia, locus A2
involved_in
ISO
(PMID:25631937)
RGD
PMID:25631937
NCBI chr20:4,872,720...4,876,425
G
Sash3
SAM and SH3 domain containing 3
acts_upstream_of_or_within involved_in
ISO IBA
MGI:3716944 (PMID:16227612) GO_REF:0000033
RGD GO_Central
PMID:16227612
GO_REF:0000033
NCBI chr X:132,204,717...132,219,421
Ensembl chr X:127,326,859...127,341,519
G
Stx4
syntaxin 4
involved_in
ISO
(PMID:24055037)
RGD
PMID:24055037
NCBI chr 1:191,880,549...191,890,333
Ensembl chr 1:182,451,117...182,459,979
G
Tlr9
toll-like receptor 9
involved_in
ISO
(PMID:23857366)
RGD
PMID:23857366
NCBI chr 8:115,743,407...115,747,523
Ensembl chr 8:106,864,680...106,868,796
G
Tnf
tumor necrosis factor
IMP
RGD
PMID:23333565
RGD:7245573
NCBI chr20:3,626,685...3,629,303
Ensembl chr20:3,622,011...3,624,629
G
Tnfrsf4
TNF receptor superfamily member 4
involved_in
ISO
(PMID:7749983)
RGD
PMID:7749983
NCBI chr 5:171,889,134...171,891,824
Ensembl chr 5:166,606,909...166,609,599
G
Tnfsf4
TNF superfamily member 4
involved_in
ISO
(PMID:7749983)
RGD
PMID:7749983
NCBI chr13:76,256,654...76,280,133
Ensembl chr13:73,723,329...73,746,788
G
Vamp3
vesicle-associated membrane protein 3
NOT|involved_in
ISO
(PMID:24055037)
RGD
PMID:24055037
NCBI chr 5:166,780,927...166,791,522
Ensembl chr 5:161,498,109...161,508,751
G
Xbp1
X-box binding protein 1
involved_in
ISS ISO IEA
GO_REF:0000024 (PMID:12612580) GO_REF:0000107 (PMID:11460154)
UniProt RGD Ensembl
PMID:11460154 PMID:12612580
GO_REF:0000024 GO_REF:0000107
NCBI chr14:84,604,623...84,609,707
Ensembl chr14:80,390,643...80,395,693
G
C10h17orf99
similar to human chromosome 17 open reading frame 99
involved_in
ISO
(PMID:28978694)
RGD
PMID:28978694
NCBI chr10:103,015,371...103,027,407
Ensembl chr10:103,016,505...103,027,407
G
Xcl1
X-C motif chemokine ligand 1
involved_in
IEA ISO
GO_REF:0000107 (PMID:9973465)
Ensembl RGD
PMID:9973465
GO_REF:0000107
NCBI chr13:79,781,784...79,785,440
Ensembl chr13:77,248,717...77,252,329
G
Tnfsf4
TNF superfamily member 4
involved_in
ISO
(PMID:12496423)
RGD
PMID:12496423
NCBI chr13:76,256,654...76,280,133
Ensembl chr13:73,723,329...73,746,788
G
Exosc3
exosome component 3
acts_upstream_of_or_within
ISO
(PMID:21255825)
RGD
PMID:21255825
NCBI chr 5:64,369,495...64,374,711
Ensembl chr 5:59,573,886...59,579,060
G
Exosc6
exosome component 6
acts_upstream_of_or_within
ISO
(PMID:21255825)
RGD
PMID:21255825
NCBI chr19:55,931,523...55,932,937
Ensembl chr19:39,022,183...39,023,515
G
Hmces
5-hydroxymethylcytosine binding, ES cell specific
involved_in
ISS ISO
GO_REF:0000024 (PMID:31806351)
UniProt RGD
PMID:31806351
GO_REF:0000024
NCBI chr 4:120,392,812...120,415,616
Ensembl chr 4:120,366,542...120,415,616
G
Kmt5b
lysine methyltransferase 5B
involved_in
ISS ISO
GO_REF:0000024 (PMID:28114273)
UniProt RGD
PMID:28114273
GO_REF:0000024
NCBI chr 1:210,429,672...210,479,042
Ensembl chr 1:201,000,444...201,049,819
G
Kmt5c
lysine methyltransferase 5C
involved_in
ISS ISO
GO_REF:0000024 (PMID:28114273)
UniProt RGD
PMID:28114273
GO_REF:0000024
NCBI chr 1:69,099,531...69,107,145
Ensembl chr 1:69,099,539...69,107,145
G
Mad2l2
mitotic arrest deficient 2 like 2
involved_in
ISO
(PMID:29656893)
RGD
PMID:29656893
NCBI chr 5:163,846,678...163,859,851
Ensembl chr 5:158,563,567...158,576,693
G
Paxip1
PAX interacting protein 1
involved_in
ISO
(PMID:20671152)
RGD
PMID:20671152
NCBI chr 4:7,525,132...7,576,659
Ensembl chr 4:7,525,004...7,576,548
G
Rif1
replication timing regulatory factor 1
involved_in
ISO
(PMID:23306439), (PMID:23333305), (PMID:23333306)
RGD
PMID:23306439 PMID:23333305 PMID:23333306
NCBI chr 3:56,963,840...57,017,106
Ensembl chr 3:36,554,697...36,603,617
G
Shld1
shieldin complex subunit 1
involved_in
ISO IBA
(PMID:29656893) GO_REF:0000033
RGD GO_Central
PMID:29656893
GO_REF:0000033
NCBI chr 3:140,391,611...140,462,273
Ensembl chr 3:119,938,833...120,009,550
G
Shld2
shieldin complex subunit 2
involved_in
ISO
(PMID:29656893)
RGD
PMID:29656893
NCBI chr16:9,554,921...9,646,186
Ensembl chr16:9,548,660...9,639,965
G
Shld3
shieldin complex subunit 3
involved_in
ISO IBA
(PMID:29656893) GO_REF:0000033
RGD GO_Central
PMID:29656893
GO_REF:0000033
NCBI chr 2:35,297,255...35,302,071
Ensembl chr 2:35,295,859...35,302,346
G
Tfrc
transferrin receptor
involved_in
ISS ISO
GO_REF:0000024 (PMID:26642240)
UniProt RGD
PMID:26642240
GO_REF:0000024
NCBI chr11:81,668,478...81,690,318
Ensembl chr11:68,163,413...68,185,257
G
Tp53bp1
tumor protein p53 binding protein 1
involved_in
ISO
(PMID:23345425), (PMID:23760478) (PMID:15077110), (PMID:15159415)
RGD
PMID:15077110 PMID:15159415 PMID:23345425 PMID:23760478
NCBI chr 3:128,620,320...128,724,716
Ensembl chr 3:108,169,980...108,269,822
G
Mlh1
mutL homolog 1
involved_in
IEA ISO
GO_REF:0000107 (PMID:10430621)
Ensembl RGD
PMID:10430621
GO_REF:0000107
NCBI chr 8:120,074,871...120,112,109
Ensembl chr 8:111,196,468...111,233,617
G
Msh2
mutS homolog 2
involved_in
IEA ISO
GO_REF:0000107 (PMID:10430621)
Ensembl RGD
PMID:10430621
GO_REF:0000107
NCBI chr 6:12,567,368...12,626,534
Ensembl chr 6:6,813,795...6,872,938
G
Nsd2
nuclear receptor binding SET domain protein 2
acts_upstream_of_or_within
ISO
(PMID:23241889)
RGD
PMID:23241889
NCBI chr14:81,057,727...81,135,866
Ensembl chr14:76,835,637...76,913,641
G
Pms2
PMS1 homolog 2, mismatch repair system component
involved_in
ISO
UniProtKB:Q9JK91 (PMID:10430621)
RGD
PMID:10430621
NCBI chr12:15,790,478...15,814,790
Ensembl chr12:10,676,764...10,701,066
G
Tgfb1
transforming growth factor, beta 1
involved_in acts_upstream_of_or_within
ISS ISO
GO_REF:0000024 (PMID:14988498)
AgBase RGD
PMID:14988498
GO_REF:0000024
NCBI chr 1:90,324,312...90,340,627
Ensembl chr 1:81,196,532...81,212,847
G
Tnfsf13
TNF superfamily member 13
acts_upstream_of_or_within involved_in
ISO IBA
(PMID:14988498) MGI:3038886 (PMID:14988498) GO_REF:0000033
RGD GO_Central
PMID:14988498
GO_REF:0000033
NCBI chr10:54,898,805...54,901,815
Ensembl chr10:54,400,065...54,403,042
G
Clcf1
cardiotrophin-like cytokine factor 1
involved_in
ISO
(PMID:12023368)
RGD
PMID:12023368
NCBI chr 1:210,937,763...210,947,064
Ensembl chr 1:201,507,859...201,517,605
G
Il4
interleukin 4
acts_upstream_of_or_within
ISO
(PMID:14988498)
RGD
PMID:14988498
NCBI chr10:38,272,003...38,277,549
Ensembl chr10:37,771,203...37,776,750
G
Stat6
signal transducer and activator of transcription 6
acts_upstream_of_or_within
ISO
MGI:107187 (PMID:10490661)
RGD
PMID:10490661
NCBI chr 7:65,365,505...65,382,825
Ensembl chr 7:63,479,642...63,498,495
G
Atad5
ATPase family, AAA domain containing 5
acts_upstream_of_or_within
ISO
MGI:4127920 (PMID:25404367)
RGD
PMID:25404367
NCBI chr10:65,568,569...65,616,379
Ensembl chr10:65,070,689...65,117,845
G
Cd28
Cd28 molecule
acts_upstream_of_or_within
ISO
MGI:1857150 (PMID:7688139)
RGD
PMID:7688139
NCBI chr 9:69,660,316...69,689,192
Ensembl chr 9:62,166,192...62,194,685
G
Cd40
CD40 molecule
acts_upstream_of_or_within
ISO
(PMID:12882831)
RGD
PMID:12882831
NCBI chr 3:174,209,113...174,224,592
Ensembl chr 3:153,790,449...153,805,534
G
Ifng
interferon gamma
acts_upstream_of_or_within
ISO
(PMID:12882831)
RGD
PMID:12882831
NCBI chr 7:55,789,180...55,793,216
Ensembl chr 7:53,903,337...53,907,375
G
Il2
interleukin 2
acts_upstream_of_or_within
ISO
MGI:1857191 (PMID:1830926)
RGD
PMID:1830926
NCBI chr 2:121,932,968...121,937,672
Ensembl chr 2:120,004,862...120,009,566
G
Il4
interleukin 4
acts_upstream_of_or_within
ISO
(PMID:12882831), (PMID:14988498)
RGD
PMID:12882831 PMID:14988498
NCBI chr10:38,272,003...38,277,549
Ensembl chr10:37,771,203...37,776,750
G
Mlh1
mutL homolog 1
involved_in
IEA ISO
GO_REF:0000107 (PMID:10430621)
Ensembl RGD
PMID:10430621
GO_REF:0000107
NCBI chr 8:120,074,871...120,112,109
Ensembl chr 8:111,196,468...111,233,617
G
Msh2
mutS homolog 2
involved_in
IEA ISO
GO_REF:0000107 (PMID:10430621)
Ensembl RGD
PMID:10430621
GO_REF:0000107
NCBI chr 6:12,567,368...12,626,534
Ensembl chr 6:6,813,795...6,872,938
G
Pagr1
Paxip1-associated glutamate-rich protein 1
involved_in
ISO
(PMID:26744420)
RGD
PMID:26744420
NCBI chr 1:181,622,698...181,625,024
G
Paxip1
PAX interacting protein 1
involved_in
ISO
(PMID:26744420)
RGD
PMID:26744420
NCBI chr 4:7,525,132...7,576,659
Ensembl chr 4:7,525,004...7,576,548
G
Pms2
PMS1 homolog 2, mismatch repair system component
involved_in
ISO
UniProtKB:Q9JK91 (PMID:10430621)
RGD
PMID:10430621
NCBI chr12:15,790,478...15,814,790
Ensembl chr12:10,676,764...10,701,066
G
Ptprc
protein tyrosine phosphatase, receptor type, C
acts_upstream_of_or_within
ISO
MGI:2181288 (PMID:9015183)
RGD
PMID:9015183
NCBI chr13:52,147,717...52,259,810
Ensembl chr13:49,596,193...49,708,692
G
Tbx21
T-box transcription factor 21
acts_upstream_of_or_within
ISO
MGI:2180194 (PMID:12882831)
RGD
PMID:12882831
NCBI chr10:82,578,751...82,595,253
Ensembl chr10:82,082,322...82,098,831
G
Card9
caspase recruitment domain family, member 9
acts_upstream_of_or_within
ISO
MGI:3698412 (PMID:17187069)
RGD
PMID:17187069
NCBI chr 3:29,569,907...29,578,402
Ensembl chr 3:9,171,815...9,180,237
G
Casp1
caspase 1
involved_in acts_upstream_of_or_within
IEA ISO
GO_REF:0000107 (PMID:18490713)
Ensembl RGD
PMID:18490713
GO_REF:0000107
NCBI chr 8:10,746,338...10,882,295
Ensembl chr 8:2,587,831...2,597,383
G
Casp4
caspase 4
acts_upstream_of_or_within
ISO
MGI:1931465|MGI:2653833 (PMID:22002608)
RGD
PMID:22002608
NCBI chr 8:10,883,817...10,919,978
Ensembl chr 8:2,598,876...2,635,092
G
Cd36
CD36 molecule
involved_in acts_upstream_of_or_within
IEA ISO
GO_REF:0000107 MGI:2447190|MGI:3573941 (PMID:15690042), (PMID:16061696)
Ensembl RGD
PMID:15690042 PMID:16061696
GO_REF:0000107
NCBI chr 4:18,209,088...18,302,142
Ensembl chr 4:17,354,466...17,513,903
G
Cd74
CD74 molecule
involved_in
ISS ISO IBA
GO_REF:0000024 (PMID:19413900) GO_REF:0000033
BHF-UCL RGD GO_Central
PMID:19413900
GO_REF:0000024 GO_REF:0000033
NCBI chr18:56,527,071...56,536,406
Ensembl chr18:54,256,778...54,266,003
G
Gprc5b
G protein-coupled receptor, class C, group 5, member B
involved_in
ISO
(PMID:23169819)
RGD
PMID:23169819
NCBI chr 1:182,748,247...182,772,711
Ensembl chr 1:173,316,907...173,340,932
G
Ifng
interferon gamma
acts_upstream_of_or_within
ISO
(PMID:9348310)
RGD
PMID:9348310
NCBI chr 7:55,789,180...55,793,216
Ensembl chr 7:53,903,337...53,907,375
G
Laptm5
lysosomal protein transmembrane 5
involved_in
ISO
(PMID:22733818)
RGD
PMID:22733818
NCBI chr 5:148,371,880...148,393,927
Ensembl chr 5:143,087,759...143,109,807
G
Mapkapk2
MAPK activated protein kinase 2
acts_upstream_of_or_within
ISO
(PMID:24020373)
RGD
PMID:24020373
NCBI chr13:45,066,027...45,112,326
Ensembl chr13:42,513,762...42,560,457
G
Mir324
microRNA 324
acts_upstream_of_or_within
ISO
(PMID:24882011)
RGD
PMID:24882011
NCBI chr10:54,734,680...54,734,762
Ensembl chr10:54,734,678...54,734,766
G
Myd88
MYD88, innate immune signal transduction adaptor
acts_upstream_of_or_within
ISO
MGI:2147032|MGI:2385681 (PMID:10607756), (PMID:11067888), (PMID:12872135)
RGD
PMID:10607756 PMID:11067888 PMID:12872135
NCBI chr 8:127,952,161...127,956,230
Ensembl chr 8:119,074,437...119,079,415
G
Nod1
nucleotide-binding oligomerization domain containing 1
acts_upstream_of_or_within
ISO
MGI:2429397|MGI:2674231 (PMID:18261938)
RGD
PMID:18261938
NCBI chr 4:85,391,142...85,442,281
Ensembl chr 4:84,060,880...84,111,404
G
Nod2
nucleotide-binding oligomerization domain containing 2
acts_upstream_of_or_within
ISO
MGI:1341839|MGI:2680581|MGI:3529594 (PMID:14560001), (PMID:15220916), (PMID:15692051), (PMID:18261938)
RGD
PMID:14560001 PMID:15220916 PMID:15692051 PMID:18261938
NCBI chr19:34,555,832...34,596,281
Ensembl chr19:18,382,439...18,417,177
G
P2rx7
purinergic receptor P2X 7
acts_upstream_of_or_within
ISO
MGI:2386080|MGI:3606250 (PMID:11016935), (PMID:18490713)
RGD
PMID:11016935 PMID:18490713
NCBI chr12:39,550,531...39,594,984
Ensembl chr12:33,879,745...33,934,619
G
Panx1
Pannexin 1
acts_upstream_of_or_within
ISO
(PMID:18490713)
RGD
PMID:18490713
NCBI chr 8:20,128,783...20,171,200
Ensembl chr 8:11,850,730...11,889,774
G
Plcg2
phospholipase C, gamma 2
involved_in acts_upstream_of
IEA ISO
GO_REF:0000107 (PMID:22041900)
Ensembl RGD
PMID:22041900
GO_REF:0000107
NCBI chr19:62,456,196...62,592,684
Ensembl chr19:45,547,416...45,683,930
G
Pycard
PYD and CARD domain containing
acts_upstream_of_or_within
ISO
MGI:107700|MGI:2653833 (PMID:22002608)
RGD
PMID:22002608
NCBI chr 1:192,032,124...192,033,419
Ensembl chr 1:182,601,174...182,602,955
G
Ripk2
receptor-interacting serine-threonine kinase 2
acts_upstream_of_or_within
ISO
MGI:2660793 (PMID:11894098), (PMID:18261938)
RGD
PMID:11894098 PMID:18261938
NCBI chr 5:34,428,573...34,459,808
Ensembl chr 5:29,631,570...29,662,657
G
RT1-M3-1
RT1 class Ib, locus M3, gene 1
involved_in
ISO
(PMID:19304799)
RGD
PMID:19304799
NCBI chr20:1,329,227...1,333,394
Ensembl chr20:1,287,521...1,328,117
G
Rtn4
reticulon 4
involved_in
ISS ISO
GO_REF:0000024 (PMID:19805174)
UniProt RGD
PMID:19805174
GO_REF:0000024
NCBI chr14:107,651,001...107,698,610
Ensembl chr14:103,449,930...103,497,686
G
Sema7a
semaphorin 7A (John Milton Hagen blood group)
involved_in
ISO
(PMID:17377534)
RGD
PMID:17377534
NCBI chr 8:67,244,318...67,267,060
Ensembl chr 8:58,348,448...58,370,536
G
Sirt1
sirtuin 1
involved_in
IEA ISO
GO_REF:0000107 (PMID:22315447)
Ensembl RGD
PMID:22315447
GO_REF:0000107
NCBI chr20:25,305,953...25,328,000
Ensembl chr20:25,306,917...25,329,260
G
Spon2
spondin 2
acts_upstream_of_or_within
ISO
MGI:3026870 (PMID:14691481)
RGD
PMID:14691481
NCBI chr14:81,713,070...81,742,510
Ensembl chr14:77,511,901...77,517,996
G
Ticam1
TIR domain containing adaptor molecule 1
acts_upstream_of_or_within
ISO
MGI:108005|MGI:2679794|MGI:3029019 (PMID:12855817), (PMID:12872135)
RGD
PMID:12855817 PMID:12872135
NCBI chr 9:1,189,717...1,197,730
Ensembl chr 9:1,102,366...1,123,147
G
Tirap
TIR domain containing adaptor protein
acts_upstream_of_or_within
ISO
MGI:3573942 (PMID:15690042)
RGD
PMID:15690042
NCBI chr 8:41,789,557...41,805,903
Ensembl chr 8:33,531,725...33,547,432
G
Tlr2
toll-like receptor 2
acts_upstream_of_or_within
ISO
MGI:2178675|MGI:2674036 (PMID:10549626), (PMID:11067888), (PMID:15690042), (PMID:18261938)
RGD
PMID:10549626 PMID:11067888 PMID:15690042 PMID:18261938
NCBI chr 2:171,499,189...171,504,831
Ensembl chr 2:169,197,419...169,206,630
G
Tlr3
toll-like receptor 3
acts_upstream_of_or_within
ISO
MGI:3690535 (PMID:12855817), (PMID:18261938)
RGD
PMID:12855817 PMID:18261938
NCBI chr16:53,554,916...53,572,321
Ensembl chr16:46,822,039...46,836,545
G
Tlr4
toll-like receptor 4
involved_in acts_upstream_of_or_within
IEA ISO
GO_REF:0000107 MGI:1857718|MGI:1860755|MGI:1860885 (PMID:10549626), (PMID:10607756), (PMID:10623794), (PMID:14691481), (PMID:15661922), (PMID:18261938), (PMID:21609717)
Ensembl RGD
PMID:10549626 PMID:10607756 PMID:10623794 PMID:14691481 PMID:15661922 PMID:18261938 PMID:21609717 More...
GO_REF:0000107
NCBI chr 5:85,161,247...85,174,882
Ensembl chr 5:80,145,826...80,159,628
G
Tlr7
toll-like receptor 7
acts_upstream_of_or_within
ISO
(PMID:18261938)
RGD
PMID:18261938
NCBI chr X:30,644,324...30,670,796
Ensembl chr X:27,027,425...27,054,754
G
Wnt5a
Wnt family member 5A
involved_in
ISO IEA
(PMID:18174455) GO_REF:0000107
RGD Ensembl
PMID:18174455
GO_REF:0000107
NCBI chr16:3,702,300...3,724,860
Ensembl chr16:3,697,032...3,718,234
G
Fcer1a
Fc epsilon receptor Ia
acts_upstream_of_or_within
ISO
(PMID:9000133)
RGD
PMID:9000133
NCBI chr13:85,686,099...85,692,394
Ensembl chr13:85,686,092...85,692,351
G
Fcer1g
Fc epsilon receptor Ig
acts_upstream_of_or_within
ISO
MGI:2384004 (PMID:14764707)
RGD
PMID:14764707
NCBI chr13:86,181,908...86,186,766
Ensembl chr13:83,649,449...83,671,443
G
Kit
KIT proto-oncogene receptor tyrosine kinase
involved_in
ISO
(PMID:20100931)
RGD
PMID:20100931
NCBI chr14:32,901,615...32,978,895
Ensembl chr14:32,548,877...32,624,652
G
Nr4a3
nuclear receptor subfamily 4, group A, member 3
involved_in
ISS ISO
GO_REF:0000024 (PMID:24586680)
UniProt RGD
PMID:24586680
GO_REF:0000024
NCBI chr 5:67,157,141...67,198,287
Ensembl chr 5:62,361,822...62,402,733
G
Syk
spleen associated tyrosine kinase
involved_in acts_upstream_of_or_within
IEA ISO
GO_REF:0000107 MGI:2384078 (PMID:9000133)
Ensembl RGD
PMID:9000133
GO_REF:0000107
NCBI chr17:12,756,493...12,830,927
Ensembl chr17:12,604,619...12,661,410
G
Camk4
calcium/calmodulin-dependent protein kinase IV
NOT|involved_in
ISO
(PMID:17909078)
RGD
PMID:17909078
NCBI chr18:24,857,152...25,076,054
Ensembl chr18:24,585,269...24,802,487
G
Ddx1
DEAD-box helicase 1
involved_in
ISO
(PMID:21703541)
RGD
PMID:21703541
NCBI chr 6:41,725,365...41,756,236
Ensembl chr 6:35,996,469...36,027,365
G
Ddx21
DExD-box helicase 21
involved_in
ISO
(PMID:21703541)
RGD
PMID:21703541
NCBI chr20:31,077,044...31,097,238
Ensembl chr20:30,534,319...30,554,543
G
Dhx36
DEAH-box helicase 36
involved_in
ISO
(PMID:21703541)
RGD
PMID:21703541
NCBI chr 2:149,006,089...149,044,192
Ensembl chr 2:146,856,469...146,894,572
G
Mavs
mitochondrial antiviral signaling protein
involved_in
ISS ISO
GO_REF:0000024 (PMID:21703541)
UniProt RGD
PMID:21703541
GO_REF:0000024
NCBI chr 3:138,904,673...138,919,129
Ensembl chr 3:118,451,743...118,466,094
G
Rig1
RNA sensor RIG-1
involved_in
ISO
(PMID:21703541)
RGD
PMID:21703541
NCBI chr 5:60,117,398...60,165,995
Ensembl chr 5:55,321,235...55,370,819
G
Ticam1
TIR domain containing adaptor molecule 1
involved_in
ISO
(PMID:21703541)
RGD
PMID:21703541
NCBI chr 9:1,189,717...1,197,730
Ensembl chr 9:1,102,366...1,123,147
G
Mif
macrophage migration inhibitory factor
involved_in
ISO
(PMID:11756671)
RGD
PMID:11756671
NCBI chr20:12,767,138...12,791,222
Ensembl chr20:12,790,902...12,799,504 Ensembl chr 4:12,790,902...12,799,504
G
Cd160
CD160 molecule
involved_in
ISO
(PMID:17307798)
RGD
PMID:17307798
NCBI chr 2:187,029,654...187,042,447
Ensembl chr 2:184,340,599...184,375,834
G
Cd226
CD226 molecule
acts_upstream_of_or_within
ISO
MGI:4454325 (PMID:24658051)
RGD
PMID:24658051
NCBI chr18:84,723,330...84,819,836
Ensembl chr18:82,450,568...82,543,051
G
Clnk
cytokine-dependent hematopoietic cell linker
involved_in
ISO
(PMID:16439675)
RGD
PMID:16439675
NCBI chr14:76,136,446...76,315,364
Ensembl chr14:71,873,105...72,101,208
G
Gimap5
GTPase, IMAP family member 5
IMP
RGD
PMID:15100275
RGD:2303778
NCBI chr 4:79,025,151...79,031,917
Ensembl chr 4:77,687,564...77,703,086
G
Il21
interleukin 21
acts_upstream_of_or_within
ISO
(PMID:14764669)
RGD
PMID:14764669
NCBI chr 2:122,045,240...122,055,142
Ensembl chr 2:120,119,444...120,126,996
G
RT1-A2
RT1 class Ia, locus A2
involved_in
ISO
(PMID:30134159)
RGD
PMID:30134159
NCBI chr20:4,872,720...4,876,425
G
RT1-CE5
RT1 class I, locus CE5
involved_in
ISO
(PMID:27455421)
RGD
PMID:27455421
NCBI chr20:3,407,880...3,484,130
G
RT1-M3-1
RT1 class Ib, locus M3, gene 1
involved_in
ISO
(PMID:16366734), (PMID:19304799), (PMID:23184984)
RGD
PMID:16366734 PMID:19304799 PMID:23184984
NCBI chr20:1,329,227...1,333,394
Ensembl chr20:1,287,521...1,328,117
G
B2m
beta-2 microglobulin
involved_in
ISO IEA
(PMID:24643698) GO_REF:0000107
RGD Ensembl
PMID:24643698
GO_REF:0000107
NCBI chr 3:129,549,236...129,555,354
Ensembl chr 3:109,095,729...109,101,766
G
Cd55
CD55 molecule (Cromer blood group)
involved_in
ISO
(PMID:16818763)
RGD
PMID:16818763
NCBI chr13:44,409,574...44,438,913
Ensembl chr13:41,857,395...41,885,831
G
Cd7
Cd7 molecule
involved_in
ISO
(PMID:10652336)
RGD
PMID:10652336
NCBI chr10:106,304,046...106,306,963
Ensembl chr10:106,304,056...106,306,967
G
Fzd5
frizzled class receptor 5
involved_in
ISO IEA
(PMID:16601243) GO_REF:0000107
RGD Ensembl
PMID:16601243
GO_REF:0000107
NCBI chr 9:73,606,860...73,614,039
Ensembl chr 9:66,113,112...66,121,457
G
Malt1
MALT1 paracaspase
involved_in
ISO
(PMID:15125833)
RGD
PMID:15125833
NCBI chr18:61,212,290...61,266,272
Ensembl chr18:58,942,299...58,994,260
G
Map3k7
mitogen activated protein kinase kinase kinase 7
involved_in
ISO
(PMID:15125833)
RGD
PMID:15125833
NCBI chr 5:51,149,524...51,212,012
Ensembl chr 5:46,357,931...46,415,597
G
RT1-CE16
RT1 class I, locus CE16
involved_in
ISO
(PMID:24643698)
RGD
PMID:24643698
NCBI chr20:3,261,656...3,265,548
Ensembl chr20:3,257,123...3,279,563
G
Sash3
SAM and SH3 domain containing 3
acts_upstream_of_or_within
ISO
MGI:3716944 (PMID:16227612)
RGD
PMID:16227612
NCBI chr X:132,204,717...132,219,421
Ensembl chr X:127,326,859...127,341,519
G
Sectm1b
secreted and transmembrane 1B
involved_in
ISO
(PMID:22184754)
RGD
PMID:22184754
NCBI chr10:106,324,070...106,333,779
Ensembl chr10:106,325,203...106,333,769
G
Tnfsf4
TNF superfamily member 4
involved_in
ISO
(PMID:18354165), (PMID:9670042)
RGD
PMID:9670042 PMID:18354165
NCBI chr13:76,256,654...76,280,133
Ensembl chr13:73,723,329...73,746,788
G
Traf2
Tnf receptor-associated factor 2
involved_in
ISO
(PMID:15125833)
RGD
PMID:15125833
NCBI chr 3:28,740,098...28,764,752
Ensembl chr 3:8,341,951...8,366,538
G
Traf6
TNF receptor associated factor 6
involved_in
ISO IEA
(PMID:15125833) GO_REF:0000107
RGD Ensembl
PMID:15125833
GO_REF:0000107
NCBI chr 3:108,418,537...108,443,330
Ensembl chr 3:87,963,514...87,983,507
G
Xcl1
X-C motif chemokine ligand 1
involved_in
ISO
(PMID:9029087)
RGD
PMID:9029087
NCBI chr13:79,781,784...79,785,440
Ensembl chr13:77,248,717...77,252,329
G
Arid5a
AT-rich interaction domain 5A
involved_in
ISO
(PMID:27671645)
RGD
PMID:27671645
NCBI chr 9:46,030,513...46,058,729
Ensembl chr 9:38,534,590...38,547,597
G
Il18
interleukin 18
involved_in
IEA ISO ISS
GO_REF:0000107 (PMID:10653850) GO_REF:0000024
Ensembl RGD UniProt
PMID:10653850
GO_REF:0000024 GO_REF:0000107
NCBI chr 8:59,802,072...59,829,275
Ensembl chr 8:50,906,960...50,932,887
G
Il18r1
interleukin 18 receptor 1
involved_in
ISO
(PMID:10653850)
RGD
PMID:10653850
NCBI chr 9:50,223,274...50,257,370
Ensembl chr 9:42,727,869...42,760,715
G
Il1b
interleukin 1 beta
involved_in
ISO ISS
(PMID:10653850) GO_REF:0000024
RGD UniProt
PMID:10653850
GO_REF:0000024
NCBI chr 3:137,030,200...137,036,581
Ensembl chr 3:116,577,010...116,583,415
G
Il1r1
interleukin 1 receptor type 1
involved_in
ISO ISS IEA
(PMID:10653850) GO_REF:0000024 GO_REF:0000107
RGD UniProt Ensembl
PMID:10653850
GO_REF:0000024 GO_REF:0000107
NCBI chr 9:50,000,558...50,076,579
Ensembl chr 9:42,504,735...42,579,937
G
Slamf1
signaling lymphocytic activation molecule family member 1
involved_in
ISO
(PMID:9126961)
RGD
PMID:9126961
NCBI chr13:86,802,708...86,837,890
Ensembl chr13:84,270,316...84,305,497
G
Tbx21
T-box transcription factor 21
involved_in
ISO
(PMID:10761931)
RGD
PMID:10761931
NCBI chr10:82,578,751...82,595,253
Ensembl chr10:82,082,322...82,098,831
G
Xcl1
X-C motif chemokine ligand 1
involved_in
IEA ISO
GO_REF:0000107 (PMID:9973465)
Ensembl RGD
PMID:9973465
GO_REF:0000107
NCBI chr13:79,781,784...79,785,440
Ensembl chr13:77,248,717...77,252,329
G
Cd81
Cd81 molecule
involved_in
ISS ISO IEA
GO_REF:0000024 (PMID:8766544) GO_REF:0000107 (PMID:11046035)
UniProt RGD Ensembl
PMID:8766544 PMID:11046035
GO_REF:0000024 GO_REF:0000107
NCBI chr 1:207,665,274...207,681,094
Ensembl chr 1:198,241,484...198,251,660
G
Dennd1b
DENN domain containing 1B
involved_in
ISO
(PMID:26774822)
RGD
PMID:26774822
NCBI chr13:53,096,717...53,324,372
Ensembl chr13:50,545,836...50,770,601
G
Gata3
GATA binding protein 3
acts_upstream_of_or_within
ISO
(PMID:15087456)
RGD
PMID:15087456
NCBI chr17:73,544,234...73,575,670
Ensembl chr17:68,643,873...68,665,391
G
Il4
interleukin 4
involved_in
ISO
(PMID:20554961)
RGD
PMID:20554961
NCBI chr10:38,272,003...38,277,549
Ensembl chr10:37,771,203...37,776,750
G
Il6
interleukin 6
involved_in
ISO
(PMID:11159963)
RGD
PMID:11159963
NCBI chr 4:5,889,999...5,894,575
Ensembl chr 4:5,213,394...5,219,178
G
Nlrp3
NLR family, pyrin domain containing 3
involved_in
ISO
(PMID:26098997)
RGD
PMID:26098997
NCBI chr10:44,826,299...44,853,373
Ensembl chr10:44,328,566...44,352,811
G
Prkcz
protein kinase C, zeta
involved_in
ISS ISO
GO_REF:0000024 (PMID:15987782)
UniProt RGD
PMID:15987782
GO_REF:0000024
NCBI chr 5:171,101,774...171,212,694
Ensembl chr 5:165,819,466...165,930,367
G
Rsad2
radical S-adenosyl methionine domain containing 2
involved_in
ISS ISO IEA
GO_REF:0000024 (PMID:19047684) GO_REF:0000107
UniProt RGD Ensembl
PMID:19047684
GO_REF:0000024 GO_REF:0000107
NCBI chr 6:48,774,985...48,788,245
Ensembl chr 6:43,047,658...43,059,699
G
Xcl1
X-C motif chemokine ligand 1
involved_in
IEA ISO
GO_REF:0000107 (PMID:9973465)
Ensembl RGD
PMID:9973465
GO_REF:0000107
NCBI chr13:79,781,784...79,785,440
Ensembl chr13:77,248,717...77,252,329
G
Evpl
envoplakin
acts_upstream_of_or_within
ISO
MGI:1194898|MGI:96626 (PMID:27427436)
RGD
PMID:27427436
NCBI chr10:101,957,107...101,973,656
Ensembl chr10:101,458,216...101,474,763
G
Ivl
involucrin
acts_upstream_of_or_within
ISO
MGI:107507|MGI:1194898 (PMID:27427436)
RGD
PMID:27427436
NCBI chr 2:180,842,307...180,854,646
Ensembl chr 2:178,147,061...178,149,100
G
Ppl
periplakin
acts_upstream_of_or_within
ISO
MGI:107507|MGI:96626 (PMID:27427436)
RGD
PMID:27427436
NCBI chr10:10,957,388...11,003,035
Ensembl chr10:10,450,919...10,496,575
G
Atg5
autophagy related 5
involved_in acts_upstream_of_or_within
IEA ISO
GO_REF:0000107 (PMID:22710871)
Ensembl RGD
PMID:22710871
GO_REF:0000107
NCBI chr20:49,380,835...49,471,826
Ensembl chr20:47,798,290...47,889,209
G
Pkp3
plakophilin 3
involved_in
ISO
(PMID:26173741)
RGD
PMID:26173741
NCBI chr 1:196,187,914...196,198,843
Ensembl chr 1:196,187,835...196,198,844
G
Tnfrsf1b
TNF receptor superfamily member 1B
involved_in
ISO
UniProtKB:Q9Z0D9 (PMID:28052249)
RGD
PMID:28052249
NCBI chr 5:162,356,250...162,387,411
Ensembl chr 5:157,070,642...157,104,206
G
Tril
TLR4 interactor with leucine-rich repeats
involved_in
ISO IBA
(PMID:19710467) GO_REF:0000033
RGD GO_Central
PMID:19710467
GO_REF:0000033
NCBI chr 4:84,252,781...84,257,626
Ensembl chr 4:82,922,328...82,927,172
G
Tlr2
toll-like receptor 2
acts_upstream_of_or_within
ISO
(PMID:19047410)
RGD
PMID:19047410
NCBI chr 2:171,499,189...171,504,831
Ensembl chr 2:169,197,419...169,206,630
G
Tlr3
toll-like receptor 3
acts_upstream_of_or_within
ISO
(PMID:19047410)
RGD
PMID:19047410
NCBI chr16:53,554,916...53,572,321
Ensembl chr16:46,822,039...46,836,545
G
Tlr4
toll-like receptor 4
involved_in acts_upstream_of_or_within
IEA ISO
GO_REF:0000107 (PMID:19047410)
Ensembl RGD
PMID:19047410
GO_REF:0000107
NCBI chr 5:85,161,247...85,174,882
Ensembl chr 5:80,145,826...80,159,628
G
Tlr9
toll-like receptor 9
acts_upstream_of_or_within
ISO
(PMID:19047410)
RGD
PMID:19047410
NCBI chr 8:115,743,407...115,747,523
Ensembl chr 8:106,864,680...106,868,796
G
Cd40
CD40 molecule
acts_upstream_of_or_within
ISO
(PMID:12958312)
RGD
PMID:12958312
NCBI chr 3:174,209,113...174,224,592
Ensembl chr 3:153,790,449...153,805,534
G
Cd40lg
CD40 ligand
involved_in acts_upstream_of_or_within
IEA ISO
GO_REF:0000107 (PMID:12958312)
Ensembl RGD
PMID:12958312
GO_REF:0000107
NCBI chr X:140,164,341...140,176,057
Ensembl chr X:135,126,969...135,138,306
G
Cgas
cyclic GMP-AMP synthase
acts_upstream_of_or_within
ISO
MGI:1328317 (PMID:26371324)
RGD
PMID:26371324
NCBI chr 8:88,172,559...88,187,538
Ensembl chr 8:79,294,511...79,305,496
G
Foxp3
forkhead box P3
acts_upstream_of_or_within
ISO
MGI:3696705 (PMID:16275384)
RGD
PMID:16275384
NCBI chr X:17,580,380...17,601,181
Ensembl chr X:14,908,494...14,923,838
G
Pkn1
protein kinase N1
involved_in acts_upstream_of_or_within
IEA ISO
GO_REF:0000107 MGI:5475202 (PMID:23223530)
Ensembl RGD
PMID:23223530
GO_REF:0000107
NCBI chr19:41,346,855...41,374,832
Ensembl chr19:24,442,122...24,470,107
G
Tnf
tumor necrosis factor
acts_upstream_of_or_within
ISO
(PMID:12958312)
RGD
PMID:12958312
NCBI chr20:3,626,685...3,629,303
Ensembl chr20:3,622,011...3,624,629
G
Traf2
Tnf receptor-associated factor 2
acts_upstream_of_or_within
ISO
(PMID:12958312)
RGD
PMID:12958312
NCBI chr 3:28,740,098...28,764,752
Ensembl chr 3:8,341,951...8,366,538
G
Traf6
TNF receptor associated factor 6
involved_in acts_upstream_of_or_within
IEA ISO
GO_REF:0000107 (PMID:12958312)
Ensembl RGD
PMID:12958312
GO_REF:0000107
NCBI chr 3:108,418,537...108,443,330
Ensembl chr 3:87,963,514...87,983,507
G
Trex1
three prime repair exonuclease 1
acts_upstream_of_or_within
ISO
MGI:2442261 (PMID:26320659), (PMID:26371324)
RGD
PMID:26320659 PMID:26371324
NCBI chr 8:118,585,082...118,586,382
Ensembl chr 8:109,706,613...109,708,796
G
Aplf
aprataxin and PNKP like factor
acts_upstream_of_or_within
ISO
MGI:4128102 (PMID:21211721)
RGD
PMID:21211721
NCBI chr 4:121,627,800...121,679,980
Ensembl chr 4:120,070,471...120,122,633
G
Mir181b1
microRNA 181b-1
acts_upstream_of_or_within
ISO
(PMID:18762567)
RGD
PMID:18762567
NCBI chr13:52,037,228...52,037,337
Ensembl chr13:49,485,688...49,485,797
G
Mir181b2
microRNA 181b-2
acts_upstream_of_or_within
ISO
(PMID:18762567)
RGD
PMID:18762567
NCBI chr 3:43,026,666...43,026,753
Ensembl chr 3:22,616,948...22,617,035
G
Supt6h
SPT6 homolog, histone chaperone and transcription elongation factor
involved_in
ISO
(PMID:21518874)
RGD
PMID:21518874
NCBI chr10:63,601,990...63,638,851
Ensembl chr10:63,103,921...63,140,780
G
Foxp3
forkhead box P3
acts_upstream_of_or_within
ISO
MGI:3696705 (PMID:16275384)
RGD
PMID:16275384
NCBI chr X:17,580,380...17,601,181
Ensembl chr X:14,908,494...14,923,838
G
Il27ra
interleukin 27 receptor subunit alpha
acts_upstream_of_or_within
ISO
MGI:3525439 (PMID:11057672)
RGD
PMID:11057672
NCBI chr19:41,014,730...41,026,740
Ensembl chr19:24,109,972...24,121,938
G
Ndfip1
Nedd4 family interacting protein 1
involved_in acts_upstream_of_or_within
IEA ISO
GO_REF:0000107 MGI:3695433 (PMID:17137798)
Ensembl RGD
PMID:17137798
GO_REF:0000107
NCBI chr18:30,265,808...30,316,068
Ensembl chr18:30,250,613...30,322,311
G
Slc15a4
solute carrier family 15 member 4
involved_in
IEA ISO ISS
GO_REF:0000107 (PMID:25310967) GO_REF:0000024
Ensembl RGD UniProt
PMID:25310967
GO_REF:0000024 GO_REF:0000107
NCBI chr12:34,684,583...34,718,429
Ensembl chr12:29,063,015...29,082,480
G
Litaf
lipopolysaccharide-induced TNF factor
acts_upstream_of_or_within
ISO
MGI:3687962 (PMID:16954198)
RGD
PMID:16954198
NCBI chr10:5,163,258...5,199,930
Ensembl chr10:4,625,552...4,692,763
G
Ube2j1
ubiquitin-conjugating enzyme E2, J1
acts_upstream_of_or_within
ISO
MGI:109298 (PMID:24020373)
RGD
PMID:24020373
NCBI chr 5:47,422,476...47,441,476
Ensembl chr 5:47,422,587...47,441,461
G
Calhm6
calcium homeostasis modulator family member 6
involved_in
ISO
(PMID:36861806)
RGD
PMID:36861806
NCBI chr20:26,638,721...26,640,466
Ensembl chr20:26,095,592...26,097,278
G
Ccl20
C-C motif chemokine ligand 20
NOT|involved_in
ISO
(PMID:19050256)
RGD
PMID:19050256
NCBI chr 9:91,837,139...91,839,736
Ensembl chr 9:84,388,904...84,391,629
G
Ccr2
C-C motif chemokine receptor 2
involved_in
ISS ISO
GO_REF:0000024 (PMID:28507030)
UniProt RGD
PMID:28507030
GO_REF:0000024
NCBI chr 8:132,611,883...132,619,106
Ensembl chr 8:123,734,430...123,742,100
G
Tnfrsf1b
TNF receptor superfamily member 1B
involved_in
IBA ISO
GO_REF:0000033 (PMID:28052249)
GO_Central RGD
PMID:28052249
GO_REF:0000033
NCBI chr 5:162,356,250...162,387,411
Ensembl chr 5:157,070,642...157,104,206
G
Trpm4
transient receptor potential cation channel, subfamily M, member 4
involved_in
ISO IEA ISS
(PMID:20656926) GO_REF:0000107 GO_REF:0000024
RGD Ensembl UniProt
PMID:20656926
GO_REF:0000024 GO_REF:0000107
NCBI chr 1:104,918,462...104,949,453
Ensembl chr 1:95,782,000...95,812,532
G
Aicda
activation-induced cytidine deaminase
involved_in
ISO
(PMID:18722174)
RGD
PMID:18722174
NCBI chr 4:157,446,120...157,455,958
Ensembl chr 4:155,774,132...155,783,972
G
Ctnnbl1
catenin, beta like 1
involved_in
ISO IEA
(PMID:18722174) GO_REF:0000107
RGD Ensembl
PMID:18722174
GO_REF:0000107
NCBI chr 3:146,387,940...146,548,987
Ensembl chr 3:146,387,889...146,548,987
G
Polb
DNA polymerase beta
acts_upstream_of_or_within
ISO
MGI:5427084 (PMID:24388753)
RGD
PMID:24388753
NCBI chr16:76,081,903...76,105,174
Ensembl chr16:69,379,400...69,404,812
G
Aicda
activation-induced cytidine deaminase
involved_in
ISO
(PMID:21518874)
RGD
PMID:21518874
NCBI chr 4:157,446,120...157,455,958
Ensembl chr 4:155,774,132...155,783,972
G
Exo1
exonuclease 1
acts_upstream_of_or_within
ISO
MGI:2653925 (PMID:14716311)
RGD
PMID:14716311
NCBI chr13:90,341,947...90,366,861
Ensembl chr13:87,809,810...87,834,654
G
Hmces
5-hydroxymethylcytosine binding, ES cell specific
involved_in
ISS ISO
GO_REF:0000024 (PMID:35450882)
UniProt RGD
PMID:35450882
GO_REF:0000024
NCBI chr 4:120,392,812...120,415,616
Ensembl chr 4:120,366,542...120,415,616
G
Mcm3ap
minichromosome maintenance complex component 3 associated protein
involved_in
ISO
(PMID:23652018)
RGD
PMID:23652018
NCBI chr20:12,127,060...12,164,651
Ensembl chr20:12,127,570...12,165,165
G
Mlh1
mutL homolog 1
involved_in acts_upstream_of_or_within
IEA ISO IBA
GO_REF:0000107 MGI:1857946 (PMID:10092760), (PMID:10429667) GO_REF:0000033
Ensembl RGD GO_Central
PMID:10092760 PMID:10429667
GO_REF:0000033 GO_REF:0000107
NCBI chr 8:120,074,871...120,112,109
Ensembl chr 8:111,196,468...111,233,617
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Msh2
mutS homolog 2
involved_in NOT|acts_upstream_of_or_within
IEA ISO
GO_REF:0000107 MGI:1858055 (PMID:9607915) MGI:109352|MGI:1857940|MGI:1858055|MGI:2680817 (PMID:14568978), (PMID:15494304), (PMID:9607916), (PMID:9697842), (PMID:9697843)
Ensembl RGD
PMID:9607915 PMID:9607916 PMID:9697842 PMID:9697843 PMID:14568978 PMID:15494304 More...
GO_REF:0000107
NCBI chr 6:12,567,368...12,626,534
Ensembl chr 6:6,813,795...6,872,938
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Msh3
mutS homolog 3
NOT|acts_upstream_of_or_within
ISO
MGI:1858056 (PMID:10662804)
RGD
PMID:10662804
NCBI chr 2:23,444,326...23,585,777
G
Msh6
mutS homolog 6
acts_upstream_of_or_within
ISO
MGI:1858014|MGI:3653701 (PMID:10662804), (PMID:15238604), (PMID:16618598), (PMID:17015724)
RGD
PMID:10662804 PMID:15238604 PMID:16618598 PMID:17015724
NCBI chr 6:12,316,190...12,333,505
Ensembl chr 6:6,562,632...6,579,956
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Nuggc
nuclear GTPase, germinal center associated
acts_upstream_of_or_within
ISO
MGI:5449552 (PMID:22833677)
RGD
PMID:22833677
NCBI chr15:43,997,446...44,041,716
Ensembl chr15:39,821,855...39,866,122
G
Pms2
PMS1 homolog 2, mismatch repair system component
involved_in acts_upstream_of_or_within
IBA ISO
GO_REF:0000033 (PMID:9618520) MGI:1857947 (PMID:10429667)
GO_Central RGD
PMID:9618520 PMID:10429667
GO_REF:0000033
NCBI chr12:15,790,478...15,814,790
Ensembl chr12:10,676,764...10,701,066
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Polb
DNA polymerase beta
acts_upstream_of_or_within
ISO
MGI:5427084 (PMID:24388753)
RGD
PMID:24388753
NCBI chr16:76,081,903...76,105,174
Ensembl chr16:69,379,400...69,404,812
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Polm
DNA polymerase mu
acts_upstream_of_or_within
ISO
MGI:2179233 (PMID:15789338)
RGD
PMID:15789338
NCBI chr14:84,921,039...84,930,649
Ensembl chr14:80,706,345...80,717,086
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Polq
DNA polymerase theta
involved_in
ISO
(PMID:16172387), (PMID:16222339), (PMID:16890500)
RGD
PMID:16172387 PMID:16222339 PMID:16890500
NCBI chr11:63,673,796...63,775,905
Ensembl chr11:63,673,816...63,775,878
G
Samhd1
SAM and HD domain containing deoxynucleoside triphosphate triphosphohydrolase 1
involved_in
ISO
(PMID:29669924)
RGD
PMID:29669924
NCBI chr 3:166,179,742...166,214,448
Ensembl chr 3:145,761,558...145,794,386
G
Ung
uracil-DNA glycosylase
acts_upstream_of_or_within
ISO
MGI:101816|MGI:2182610 (PMID:15494304), (PMID:17015724)
RGD
PMID:15494304 PMID:17015724
NCBI chr12:48,145,838...48,154,789
Ensembl chr12:42,485,276...42,494,206
G
Mlh1
mutL homolog 1
acts_upstream_of_or_within
ISO
MGI:1857946 (PMID:11828012)
RGD
PMID:11828012
NCBI chr 8:120,074,871...120,112,109
Ensembl chr 8:111,196,468...111,233,617
G
Msh2
mutS homolog 2
acts_upstream_of_or_within
ISO
MGI:109352|MGI:1857940|MGI:2151801|MGI:2680817 (PMID:11828012), (PMID:14563316), (PMID:14568978), (PMID:15494304), (PMID:15955838)
RGD
PMID:11828012 PMID:14563316 PMID:14568978 PMID:15494304 PMID:15955838
NCBI chr 6:12,567,368...12,626,534
Ensembl chr 6:6,813,795...6,872,938
G
Msh3
mutS homolog 3
acts_upstream_of_or_within
ISO
MGI:1858056 (PMID:15238604)
RGD
PMID:15238604
NCBI chr 2:23,444,326...23,585,777
G
Msh6
mutS homolog 6
acts_upstream_of_or_within
ISO
MGI:1858014 (PMID:15238604)
RGD
PMID:15238604
NCBI chr 6:12,316,190...12,333,505
Ensembl chr 6:6,562,632...6,579,956
G
Pms2
PMS1 homolog 2, mismatch repair system component
acts_upstream_of_or_within
ISO
MGI:1857947 (PMID:11828012)
RGD
PMID:11828012
NCBI chr12:15,790,478...15,814,790
Ensembl chr12:10,676,764...10,701,066
G
Ung
uracil-DNA glycosylase
acts_upstream_of_or_within
ISO
MGI:101816|MGI:2182610 (PMID:15494304)
RGD
PMID:15494304
NCBI chr12:48,145,838...48,154,789
Ensembl chr12:42,485,276...42,494,206
G
Mlh1
mutL homolog 1
acts_upstream_of_or_within
ISO
MGI:101816 (PMID:12743174)
RGD
PMID:12743174
NCBI chr 8:120,074,871...120,112,109
Ensembl chr 8:111,196,468...111,233,617
G
Msh2
mutS homolog 2
involved_in acts_upstream_of_or_within
IBA ISO
GO_REF:0000033 MGI:101938 (PMID:12743174)
GO_Central RGD
PMID:12743174
GO_REF:0000033
NCBI chr 6:12,567,368...12,626,534
Ensembl chr 6:6,813,795...6,872,938
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